Help needed: patching EMBOSS to use system pcre, expat and zlib
Chen Lei
supercyper at 163.com
Thu Feb 25 18:10:45 UTC 2010
Hi Julian,
The emboss seems also bundled a copy of plplot which already in fedora.
You can first del bundled stuffs and then modify Makefile.am and configure,in to remove those stuffs .
Finally you need to type
aclocal -I m4
autoconf
automake -a
在2010-02-25 12:18:08,"Chen Lei" <supercyper at 163.com> 写道:
Hi Julian,
I think you should first confirm if the bundled zlib,?expat?and?pcre was heavily changed compared to the system-wide libs. If they are heavily changed, you maybe need use bundled version. otherwise it must be patched to avoid using bundled libs.
在2010-02-25?04:28:33,"Julian?Sikorski"?<belegdol at gmail.com>?写道:
>Hello,
>
>EMBOSS?6.2.0?bundles?zlib,?expat?and?pcre.?In?the?previous?version,?I
>got?help?from?a?fellow?packager?to?patch?the?pcre?out,?but?that?patch?no
>longer?works.?Thus,?I'd?like?to?ask?for?help?in?solving?this?problem,
>which?is?unfortunately?beyond?my?skills.
>Ideally,?I'd?gladly?accept?a?co-maintainer?for?this?bioinformatics?suite.
>I?have?built?the?package?with?bundled?libs?for?devel?for?the?time?being,
>so?that?potential?helpers?have?access?to?the?latest?spec?file.
>
>Regards,
>Julian
>
>--?
>devel?mailing?list
>devel at lists.fedoraproject.org
>https://admin.fedoraproject.org/mailman/listinfo/devel
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