Fedora 13 Update: BEDTools-2.11.2-1.fc13
updates at fedoraproject.org
updates at fedoraproject.org
Tue Mar 15 21:49:05 UTC 2011
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Fedora Update Notification
FEDORA-2011-1742
2011-02-18 01:32:05
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Name : BEDTools
Product : Fedora 13
Version : 2.11.2
Release : 1.fc13
URL : http://code.google.com/p/bedtools/
Summary : A flexible suite of utilities for comparing genomic features
Description :
The BEDTools utilities allow one to address common genomics tasks such
as finding feature overlaps and computing coverage. The utilities are
largely based on four widely-used file formats: BED, GFF/GTF, VCF, and
SAM/BAM. Using BEDTools, one can develop sophisticated pipelines that
answer complicated research questions by "streaming" several BEDTools
together.
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Update Information:
Update to 2.11.2 - remove groupBy and add fjoin
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ChangeLog:
* Thu Feb 17 2011 Adam Huffman <bloch at verdurin.com> - 2.11.2-1
- new upstream release
- now README.rst
- remove groupBy command, now in filo
- new fjoin command
* Mon Feb 7 2011 Fedora Release Engineering <rel-eng at lists.fedoraproject.org> - 2.10.1-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_15_Mass_Rebuild
* Wed Nov 17 2010 Adam Huffman <bloch at verdurin.com> - 2.10.1-1
- new annotateBed tool
- updated manual
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This update can be installed with the "yum" update program. Use
su -c 'yum update BEDTools' at the command line.
For more information, refer to "Managing Software with yum",
available at http://docs.fedoraproject.org/yum/.
All packages are signed with the Fedora Project GPG key. More details on the
GPG keys used by the Fedora Project can be found at
https://fedoraproject.org/keys
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