Fedora 22 Update: cube-4.3.1-1.fc22

Tue May 26 03:33:37 UTC 2015

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Fedora Update Notification
FEDORA-2015-8011
2015-05-12 15:27:22
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Name        : cube
Product     : Fedora 22
Version     : 4.3.1
Release     : 1.fc22
URL         : http://www.scalasca.org/software/cube-4.x/download.html
Summary     : CUBE Uniform Behavioral Encoding generic presentation component
Description :
CUBE (CUBE Uniform Behavioral Encoding) is a generic presentation component
suitable for displaying a wide variety of performance metrics for parallel
programs including MPI and OpenMP applications. CUBE allows interactive
exploration of a multidimensional performance space in a scalable fashion.
Scalability is achieved in two ways: hierarchical decomposition of individual
dimensions and aggregation across different dimensions. All performance
metrics are uniformly accommodated in the same display and thus provide the
ability to easily compare the effects of different kinds of performance
behavior.

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Update Information:

Score-P 1.4:

Major features:

- Basic support for OpenCL instrumentation.
- For GCC versions 4.5 till 4.9 a new function instrumentation is available via the plug-in interface of the compiler. This new function instrumentation greatly improves the measurement performance. It also provides compile-time instrumentation filtering using the same filter file format as the run-time  filtering.  On some systems the GCC plug-in dev package needs to be installed, in order to provide the necessary header files.

Features and improvements:

- Support for pthread_exit and pthread_cancel was added.
- Added support for task migration in the profiling system.
- Added support for Intel Xeon Phi systems (native mode only)
- Added new user instrumentation macros (e.g., SCOREP_USER_REGION_BY_NAME_BEGIN( name, type ) and  SCOREP_USER_REGION_BY_NAME_END( name )). These macros can annotate user regions without the need to take care about the handle struct.

User tools and API improvements and changes:

- Due to the added task migration support, the default for the invokation of OPARI2 in the instrumenter was changed. Until now, the instrumenter let OPARI2 make all tasks tied and print a warning if an untied task was encountered. The new default is that the untied tasks are left untied and no warning is printed.
- The task related data storage mechanism was changed. The profiling backend does not use a hash table to associate a task id with a data structure anymore, but gets a pointer from the task management in the measurement core. Thus, the environment variable SCOREP_PROFILING_TASK_TABLE_SIZE to specify the size of the hash table disappeared.
- Added the environment variable SCOREP_PROFILING_TASK_EXCHANGE_NUM to specify how ofter the profiling system returns reallocated memory objects that have migrated to another thread.
- Support for cobi was removed.
- SCOREP_User_RegionBegin / SCOREP_User_RegionInit accept NULL as parameter value for lastFileName and lastFileHandle. This simplifies the calls to these functions when used directly without the provided macros.
- score-score got a new option: -m allows to display mangled region names.  Furthermore, the filter evalution in scorep-score can also use mangled names, too.

Bugfixes:

- In some cases, not all regions are exited at measurement finalization time. Fixed.
- Using PGI compiler instrumentation in conjunction with tasks could lead wrong region handles in region exits. Fixed.
- Fix building of MPI wrapper if compiler issues unrelated warnings at configure time.
- The SCOREP_USER_METRIC_UINT64 macro used signed values. Fixed.
- Add conflict in the instrumenter between --thread=pthread and --mutex=pthread.
- Fixed errors with libmpigf during linking of the instrumented application.
- Fixes wrong acquisition order in pthread_cond_timedwait by modifying the nesting level (analog pthread_cond_wait)
- Fixes that internal CUDA driver calls were recorded
- Fixes a potential deadlock in CUDA adapter for multithreaded CUDA
- Fortran OpenMP applications instrumented with OPARI2 and preprocessing report wrong file names ending in '.input.F' for POMP2 regions.
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ChangeLog:

* Tue May  5 2015 Orion Poplawski <orion at cora.nwra.com> - 4.3.1-1
- Update to 4.3.1
* Sat May  2 2015 Kalev Lember <kalevlember at gmail.com> - 4.2.3-5
- Rebuilt for GCC 5 C++11 ABI change
* Thu Mar 26 2015 Richard Hughes <rhughes at redhat.com> - 4.2.3-4
- Add an AppData file for the software center
* Tue Mar  3 2015 Peter Robinson <pbrobinson at fedoraproject.org> 4.2.3-3
- rebuild (gcc5)
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This update can be installed with the "yum" update program.  Use
su -c 'yum update cube' at the command line.
For more information, refer to "Managing Software with yum",
available at http://docs.fedoraproject.org/yum/.

All packages are signed with the Fedora Project GPG key.  More details on the
GPG keys used by the Fedora Project can be found at
https://fedoraproject.org/keys
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