Architecture specific change in rpms/python-nifti-mrs.git

The package rpms/python-nifti-mrs.git has added or updated architecture specific content in its
spec file (ExclusiveArch/ExcludeArch or %ifarch/%ifnarch) in commit(s):
https://src.fedoraproject.org/cgit/rpms/python-nifti-mrs.git/commit/?id=ff40....

Change:
+%ifarch s390x

Thanks.

Full change:
============

commit ff40e5957984de8b7f842d77e64d16c43ef7c809
Author: Benjamin A. Beasley 
Date:   Wed Jan 31 12:07:11 2024 -0500

Initial package (close RHBZ#2250532)

diff --git a/.gitignore b/.gitignore
new file mode 100644
index 0000000..8cc4cf7
--- /dev/null
+++ b/.gitignore
@@ -0,0 +1 @@
+/nifti_mrs_tools-1.1.1.tar.gz
diff --git a/.packit.yaml b/.packit.yaml
new file mode 100644
index 0000000..8cb2e5e
--- /dev/null
+++ b/.packit.yaml
@@ -0,0 +1,12 @@
+upstream_project_url: https://github.com/wtclarke/nifti_mrs_tools
+copy_upstream_release_description: false
+
+jobs:
+  - job: pull_from_upstream
+    trigger: release
+    dist_git_branches:
+      - fedora-rawhide
+  - job: koji_build
+    trigger: commit
+    dist_git_branches:
+      - fedora-all
diff --git a/mrs_tools-conjugate.1 b/mrs_tools-conjugate.1
new file mode 100644
index 0000000..397917f
--- /dev/null
+++ b/mrs_tools-conjugate.1
@@ -0,0 +1,35 @@
+.TH MRS_TOOLS-CONJUGATE "1" "November 2023" "" "User Commands"
+.SH NAME
+.B mrs_tools\ conjugate
+(en Conjugate data to correct phase/frequency convention in a NIfTI-MRS file
+.SH SYNOPSIS
+.B mrs_tools\ conjugate
+.RB [ -h ]
+.B --file\ \fIFILE
+.RB [ --output\ \fIOUTPUT ]
+.RB [ --filename\ \fIFILENAME ]
+.SH OPTIONS
+.SS "OPTIONAL\ ARGUMENTS"
+.TP
+.B -h\fR,\ \fB--help
+Show a help message and exit.
+.TP
+.B --output\ \fIOUTPUT
+Output folder (defaults to current directory).
+.TP
+.B --filename\ \fIFILENAME
+Override output file names.
+.SS "REQUIRED\ ARGUMENTS"
+.TP
+.B --file\ \fIFILE
+File to conjugage.
+.SH "SEE ALSO"
+.BR mrs_tools (1)
+.P
+.BR mrs_tools-info (1),
+.BR mrs_tools-vis (1),
+.BR mrs_tools-merge (1),
+.BR mrs_tools-split (1),
+.BR mrs_tools-reorder (1),
+.BR mrs_tools-reshape (1)
+." .BR mrs_tools-conjugate (1)
diff --git a/mrs_tools-info.1 b/mrs_tools-info.1
new file mode 100644
index 0000000..4f36a3c
--- /dev/null
+++ b/mrs_tools-info.1
@@ -0,0 +1,29 @@
+.TH MRS_TOOLS-INFO "1" "November 2023" "" "User Commands"
+.SH NAME
+.B mrs_tools\ info
+(en Information about the NIfTI-MRS file
+.SH SYNOPSIS
+.B mrs_tools\ info
+.RB [ -h ]
+.I FILE\fR\ or\ list\ of\ \fIFILE\fRs
+.RI [ FILE\fR\ or\ list\ of\ \fIFILE\fRs ...]
+.SH OPTIONS
+.SS "POSITIONAL\ ARGUMENTS"
+.TP
+.I FILE\fR\ or\ list\ of\ \fIFILE\fRs
+NIfTI MRS file(s)
+Information about the NIfTI-MRS file.
+.SS "OPTIONAL\ ARGUMENTS"
+.TP
+.B -h\fR,\ \fB--help
+Show a help message and exit.
+.SH "SEE ALSO"
+.BR mrs_tools (1)
+.P
+." .BR mrs_tools-info (1),
+.BR mrs_tools-vis (1),
+.BR mrs_tools-merge (1),
+.BR mrs_tools-split (1),
+.BR mrs_tools-reorder (1),
+.BR mrs_tools-reshape (1),
+.BR mrs_tools-conjugate (1)
diff --git a/mrs_tools-merge.1 b/mrs_tools-merge.1
new file mode 100644
index 0000000..223bcbc
--- /dev/null
+++ b/mrs_tools-merge.1
@@ -0,0 +1,44 @@
+.TH MRS_TOOLS-MERGE "1" "November 2023" "" "User Commands"
+.SH NAME
+.B mrs_tools\ merge
+(en Merge NIfTI-MRS along higher dimensions
+.SH SYNOPSIS
+.B mrs_tools\ merge
+.RB [ -h ]
+.B --files\ \fIFILES\ \fR[\fIFIELS\fR\ ...]
+.B --dim\ \fIDIM
+.RB [ --newaxis ]
+.RB [ --output\ \fIOUTPUT ]
+.RB [ --filename\ \fIFILENAME ]
+.SH OPTIONS
+.SS "OPTIONAL\ ARGUMENTS"
+.TP
+.B -h\fR,\ \fB--help
+Show a help message and exit.
+.TP
+.B --newaxis
+Join files along a new axis (tag specified by
+.BR --dim ).
+.TP
+.B --output\ \fIOUTPUT
+Output folder (defaults to current directory).
+.TP
+.B --filename\ \fIFILENAME
+Override output file name.
+.SS "REQUIRED\ ARGUMENTS"
+.TP
+.B --files\ \fIFILES\ \fR[\fIFIELS\fR\ ...]
+List of files to merge.
+.TP
+.B --dim\ \fIDIM
+NIFTI-MRS dimension tag to merge across.
+.SH "SEE ALSO"
+.BR mrs_tools (1)
+.P
+.BR mrs_tools-info (1),
+.BR mrs_tools-vis (1),
+." .BR mrs_tools-merge (1),
+.BR mrs_tools-split (1),
+.BR mrs_tools-reorder (1),
+.BR mrs_tools-reshape (1),
+.BR mrs_tools-conjugate (1)
diff --git a/mrs_tools-reorder.1 b/mrs_tools-reorder.1
new file mode 100644
index 0000000..c25e2d9
--- /dev/null
+++ b/mrs_tools-reorder.1
@@ -0,0 +1,43 @@
+.TH MRS_TOOLS-REORDER "1" "November 2023" "" "User Commands"
+.SH NAME
+.B mrs_tools\ reorder
+(en Reorder higher dimensions of NIfTI-MRS
+.SH SYNOPSIS
+.B mrs_tools\ reorder
+.RB [ -h ]
+.B --file\ \fIFILE
+.B --dim_order\ \fIDIM_ORDER\fR\ [\fIDIM_ORDER\fR\ ...]
+.RB [ --output\ \fIOUTPUT ]
+.RB [ --filename\ \fIFILENAME ]
+.SH OPTIONS
+.SS "OPTIONAL\ ARGUMENTS"
+.TP
+.B -h\fR,\ \fB--help
+Show a help message and exit.
+.TP
+.B --output\ \fIOUTPUT
+Output folder (defaults to current directory).
+.TP
+.B --filename\ \fIFILENAME
+Override output file names.
+.SS "REQUIRED\ ARGUMENTS"
+.TP
+.B --file\ \fIFILE
+File to reorder.
+.TP
+.B --dim_order\ \fIDIM_ORDER\fR\ [\fIDIM_ORDER\fR\ ...]
+NIFTI-MRS dimension tags in desired order.
+Enter as strings
+.RB (min: 1 ,
+.RB max: 3 ).
+Can create singleton dimension at end.
+.SH "SEE ALSO"
+.BR mrs_tools (1)
+.P
+.BR mrs_tools-info (1),
+.BR mrs_tools-vis (1),
+.BR mrs_tools-merge (1),
+.BR mrs_tools-split (1),
+." .BR mrs_tools-reorder (1),
+.BR mrs_tools-reshape (1),
+.BR mrs_tools-conjugate (1)
diff --git a/mrs_tools-reshape.1 b/mrs_tools-reshape.1
new file mode 100644
index 0000000..e35b02e
--- /dev/null
+++ b/mrs_tools-reshape.1
@@ -0,0 +1,58 @@
+.TH MRS_TOOLS-RESHAPE "1" "November 2023" "" "User Commands"
+.SH NAME
+.B mrs_tools\ reshape
+(en Reorder higher dimensions of NIfTI-MRS
+.SH SYNOPSIS
+.B mrs_tools\ reshape
+.RB [ -h ]
+.B --file\ \fIFILE
+.B --shape\ \fISHAPE\fR\ [\fISHAPE\fR\ ...]
+.RB [ --d5\ \fID5 ]
+.RB [ --d6\ \fID6 ]
+.RB [ --d7\ \fID7 ]
+.RB [ --output\ \fIOUTPUT ]
+.RB [ --filename\ \fIFILENAME ]
+.SH OPTIONS
+.SS "OPTIONAL\ ARGUMENTS"
+.TP
+.B -h\fR,\ \fB--help
+Show a help message and exit.
+.TP
+.B --d5\ \fID5
+5th dimension tag (e.g.:
+.BR DIM_DYN ).
+.TP
+.B --d6\ \fID6
+6th dimension tag (e.g.:
+.BR DIM_DYN ).
+.TP
+.B --d7\ \fID7
+7th dimension tag (e.g.:
+.BR DIM_DYN ).
+.TP
+.B --output\ \fIOUTPUT
+Output folder (defaults to current directory).
+.TP
+.B --filename\ \fIFILENAME
+Override output file names.
+.SS "REQUIRED\ ARGUMENTS"
+.TP
+.B --file\ \fIFILE
+File to reshape.
+.TP
+.B --shape\ \fISHAPE\fR\ [\fISHAPE\fR\ ...]
+Numpy-like target shape.
+Enter as integers,
+.B -1
+is used for any.
+Only enter shape for higher (5th-7th) dimensions.
+.SH "SEE ALSO"
+.BR mrs_tools (1)
+.P
+.BR mrs_tools-info (1),
+.BR mrs_tools-vis (1),
+.BR mrs_tools-merge (1),
+.BR mrs_tools-split (1),
+.BR mrs_tools-reorder (1),
+." .BR mrs_tools-reshape (1),
+.BR mrs_tools-conjugate (1)
diff --git a/mrs_tools-split.1 b/mrs_tools-split.1
new file mode 100644
index 0000000..140cd95
--- /dev/null
+++ b/mrs_tools-split.1
@@ -0,0 +1,47 @@
+.TH MRS_TOOLS-SPLIT "1" "November 2023" "" "User Commands"
+.SH NAME
+.B mrs_tools\ split
+(en Split NIfTI-MRS along higher dimensions
+.SH SYNOPSIS
+.B mrs_tools\ split
+.RB [ -h ]
+.B --file\ \fIFILE
+.B --dim\ \fIDIM
+(\fB--indices\ \fIINDICES\ \fR[\fIINDICES\fR\ ...]\ |\ \fB--index\ \fIINDEX\fR)
+.RB [ --output\ \fIOUTPUT ]
+.RB [ --filename\ \fIFILENAME ]
+.SH OPTIONS
+.SS "OPTIONAL\ ARGUMENTS"
+.TP
+.B -h\fR,\ \fB--help
+Show a help message and exit.
+.TP
+.B --indices\ \fIINDICES\ \fR[\fIINDICES\fR\ ...]
+List of indices to extract into second file.
+All indices are zero-indexed.
+.TP
+.B --index\ \fIINDEX
+Index to split at (split after index, zero-indexed).
+.TP
+.B --output\ \fIOUTPUT
+Output folder (defaults to current directory).
+.TP
+.B --filename\ \fIFILENAME
+Override output file name.
+.SS "REQUIRED\ ARGUMENTS"
+.TP
+.B --file\ \fIFILE
+File to split.
+.TP
+.B --dim\ \fIDIM
+NIFTI-MRS dimension tag to merge across.
+.SH "SEE ALSO"
+.BR mrs_tools (1)
+.P
+.BR mrs_tools-info (1),
+.BR mrs_tools-vis (1),
+.BR mrs_tools-merge (1),
+." .BR mrs_tools-split (1),
+.BR mrs_tools-reorder (1),
+.BR mrs_tools-reshape (1),
+.BR mrs_tools-conjugate (1)
diff --git a/mrs_tools-vis.1 b/mrs_tools-vis.1
new file mode 100644
index 0000000..a4d5ec3
--- /dev/null
+++ b/mrs_tools-vis.1
@@ -0,0 +1,50 @@
+.TH MRS_TOOLS-VIS "1" "November 2023" "" "User Commands"
+.SH NAME
+.B mrs_tools\ vis
+(en Quick visualisation of a NIfTI-MRS file or FSL-MRS basis set
+.SH SYNOPSIS
+.B mrs_tools\ vis
+.RB [ -h ]
+.RB [ --ppmlim\ \fILOW\fR\ \fIHIGH ]
+.RB [ --mask\ \fIMASK ]
+.RB [ --save\ \fISAVE ]
+.RB [ --display_dim\ \fIDISPLAY_DIM ]
+.RB [ --no_mean ]
+.I FILE\fR\ or\ \fIDIR
+.RI [ FILE\fR\ or\ list\ of\ \fIFILE\fRs ...]
+.SH OPTIONS
+.SS "POSITIONAL\ ARGUMENTS"
+.TP
+.I FILE\fR\ or\ \fIDIR
+NIfTI file or directory of basis sets
+.SS "OPTIONAL\ ARGUMENTS"
+.TP
+.B -h\fR,\ \fB--help
+Show a help message and exit.
+.TP
+.B --ppmlim\ \fILOW\fR\ \fIHIGH
+Limit the fit to a freq range
+.RB (default= (.2,4.2) ).
+.TP
+.B --mask\ \fIMASK
+Mask for MRSI.
+.TP
+.B --save\ \fISAVE
+Save fig to path.
+.TP
+.B --display_dim\ \fIDISPLAY_DIM
+NIFTI-MRS tag.
+Do not average across this dimension.
+.TP
+.B --no_mean
+Do not plot the mean signal line in the case of multiple spectra.
+.SH "SEE ALSO"
+.BR mrs_tools (1)
+.P
+.BR mrs_tools-info (1),
+." .BR mrs_tools-vis (1),
+.BR mrs_tools-merge (1),
+.BR mrs_tools-split (1),
+.BR mrs_tools-reorder (1),
+.BR mrs_tools-reshape (1),
+.BR mrs_tools-conjugate (1)
diff --git a/mrs_tools.1 b/mrs_tools.1
new file mode 100644
index 0000000..b98af26
--- /dev/null
+++ b/mrs_tools.1
@@ -0,0 +1,64 @@
+.TH MRS_TOOLS "1" "November 2023" "" "User Commands"
+.SH NAME
+.B mrs_tools
+(en NIfTI-MRS (Magnetic Resonance Spectroscopy) tools
+.SH SYNOPSIS
+.B mrs_tools
+.RB [ -h ]
+.RB [ -v ]
+.RB { info , vis , merge , split , reorder , reshape , conjugate }\ ...:
+.RI [ OPTIONS ]
+.I COMMAND
+.RI [ ARGS ]...
+.SH OPTIONS
+.TP
+.B -h\fR,\ \fB--help
+Show a help message and exit.
+.TP
+.B -v\fR,\ \fB--version
+Show the program(cqs version number and exit.
+.SS "SUBCOMMANDS"
+Available tools
+.TP
+.B info
+Information about the NIfTI-MRS file.
+See
+.BR mrs_tools-info (1).
+.TP
+.B vis
+Quick visualisation of a NIfTI-MRS file or FSL-MRS basis set.
+See
+.BR mrs_tools-vis (1).
+.TP
+.B merge
+Merge NIfTI-MRS along higher dimensions.
+See
+.BR mrs_tools-merge (1).
+.TP
+.B split
+Split NIfTI-MRS along higher dimensions.
+See
+.BR mrs_tools-split (1).
+.TP
+.B reorder
+Reorder higher dimensions of NIfTI-MRS.
+See
+.BR mrs_tools-reorder (1).
+.TP
+.B reshape
+Reorder higher dimensions of NIfTI-MRS.
+See
+.BR mrs_tools-reshape (1).
+.TP
+.B conjugage
+Conjugate data to correct phase/frequency convention in a NIfTI-MRS file.
+See
+.BR mrs_tools-conjugate (1).
+.SH "SEE ALSO"
+.BR mrs_tools-info (1),
+.BR mrs_tools-vis (1),
+.BR mrs_tools-merge (1),
+.BR mrs_tools-split (1),
+.BR mrs_tools-reorder (1),
+.BR mrs_tools-reshape (1),
+.BR mrs_tools-conjugate (1)
diff --git a/python-nifti-mrs.spec b/python-nifti-mrs.spec
new file mode 100644
index 0000000..0afc28f
--- /dev/null
+++ b/python-nifti-mrs.spec
@@ -0,0 +1,167 @@
+# Sphinx-generated HTML documentation is not suitable for packaging; see
+# https://bugzilla.redhat.com/show_bug.cgi?id=2006555 for discussion.
+#
+# We can generate PDF documentation as a substitute.
+%bcond doc 1
+
+Name:           python-nifti-mrs
+Version:        1.1.1
+Release:        %autorelease
+Summary:        Software tools for the NIfTI-MRS data format
+
+# The entire package is BSD-3-Clause, except the generated
+# %%{python3_sitelib}/nifti_mrs/_version.py in python3-nifti-mrs, which is
+# Unlicense because it is generated by Versioneer (python-versioneer).
+License:        BSD-3-Clause
+URL:            https://github.com/wtclarke/nifti_mrs_tools
+# The GitHub archive contains API documentation and a changelog file, which the
+# PyPI sdists lack.
+Source:         %{url}/archive/%{version}/nifti_mrs_tools-%{version}.tar.gz
+
+# Man pages hand-written for Fedora in groff_man(7) format based on --help
+Source10:       mrs_tools.1
+Source11:       mrs_tools-conjugate.1
+Source12:       mrs_tools-info.1
+Source13:       mrs_tools-merge.1
+Source14:       mrs_tools-reorder.1
+Source15:       mrs_tools-reshape.1
+Source16:       mrs_tools-split.1
+Source17:       mrs_tools-vis.1
+
+# The base package is arched due to endian-dependent test failures, but the
+# binary packages are noarch and contain no compiled code.
+%global debug_package %{nil}
+ 
+BuildRequires:  python3-devel
+
+BuildRequires:  %{py3_dist pytest}
+
+%if %{with doc}
+BuildRequires:  make
+BuildRequires:  python3-sphinx-latex
+BuildRequires:  latexmk
+%endif
+
+%global common_description %{expand:
+This package contains python-based tools for representing, validating, and
+manipulating the NIfTI-MRS format. NIfTI-MRS is a standardized format for
+storing Magnetic Resonance Spectroscopy data.
+
+These tools are used extensively in the spec2nii format conversion program and
+the FSL-MRS analysis software. However, this library can also be used as a
+stand-alone set of tools.
+
+If you use these tools please cite: Clarke, WT, Bell, TK, Emir, UE, et al.
+NIfTI-MRS: A standard data format for magnetic resonance spectroscopy. Magn
+Reson Med. 2022; 88: 2358- 2370. doi:10.1002/mrm.29418}
+
+%description %{common_description}
+
+
+%package -n     python3-nifti-mrs
+Summary:        %{summary}
+# The entire package is BSD-3-Clause, except the generated
+# %%{python3_sitelib}/nifti_mrs/_version.py in python3-nifti-mrs, which is
+# Unlicense because it is generated by Versioneer (python-versioneer).
+License:        BSD-3-Clause AND Unlicense
+
+BuildArch:      noarch
+
+%description -n python3-nifti-mrs %{common_description}
+
+
+%package -n     mrs_tools
+Summary:        NIfTI-MRS (Magnetic Resonance Spectroscopy) tools
+
+BuildArch:      noarch
+
+Requires:       python3-nifti-mrs = %{version}-%{release}
+
+%py_provides python3-mrs-tools
+
+%description -n mrs_tools %{common_description}
+
+
+# We don’t generate a metapackage for the “VIS” extra because it requires
+# fsl-mrs, which (1) is not packaged, (2) is not on PyPI, (3) is non-free
+# (non-commercial use only).
+
+
+%if %{with doc}
+%package        doc
+Summary:        Documentation for python-nifti-mrs
+
+BuildArch:      noarch
+
+%description    doc %{common_description}
+%endif
+
+
+%prep
+%autosetup -n nifti_mrs_tools-%{version}
+
+
+%generate_buildrequires
+%pyproject_buildrequires
+
+
+%build
+%pyproject_wheel
+%if %{with doc}
+PYTHONPATH="${PWD}/src" %make_build -C apidoc latex \
+    SPHINXOPTS='-j%{?_smp_build_ncpus}'
+%make_build -C apidoc/_build/latex LATEXMKOPTS='-quiet'
+%endif
+
+
+%install
+%pyproject_install
+%pyproject_save_files -l nifti_mrs mrs_tools
+install -t '%{buildroot}%{_mandir}/man1' -D -p -m 0644 \
+    '%{SOURCE10}' '%{SOURCE11}' '%{SOURCE12}' '%{SOURCE13}' '%{SOURCE14}' \
+    '%{SOURCE15}' '%{SOURCE16}' '%{SOURCE17}'
+
+
+%check
+%ifarch s390x
+# Tests fail when file endianness does not match host endianness
+# https://github.com/wtclarke/nifti_mrs_tools/issues/16
+# Nevertheless, the software may still be useful on this architecture for
+# processing big-endian NIfTI files, so we skip the tests rather than adding
+# ExcludeArch.
+k="${k-}${k+ and }not test_nifti_mrs_save"
+k="${k-}${k+ and }not test_merge"
+k="${k-}${k+ and }not test_split"
+k="${k-}${k+ and }not test_reorder"
+k="${k-}${k+ and }not test_reshape"
+k="${k-}${k+ and }not test_conjugate"
+%endif
+
+%pytest -k "${k-}" -v
+
+
+%files -n python3-nifti-mrs -f %{pyproject_files}
+%if %{without doc}
+%doc CHANGELOG.md
+%doc README.md
+%endif
+%exclude %{python3_sitelib}/mrs_tools/
+
+
+%files -n mrs_tools
+%{python3_sitelib}/mrs_tools/
+%{_bindir}/mrs_tools
+%{_mandir}/man1/mrs_tools*.1*
+
+
+%if %{with doc}
+%files doc
+%license LICENSE
+%doc CHANGELOG.md
+%doc README.md
+%doc apidoc/_build/latex/nifti-mrs.pdf
+%endif
+
+
+%changelog
+%autochangelog
diff --git a/sources b/sources
new file mode 100644
index 0000000..ef15ced
--- /dev/null
+++ b/sources
@@ -0,0 +1 @@
+SHA512 (nifti_mrs_tools-1.1.1.tar.gz) = 1f1f8f5370629928859f868aed216e3b40a32a8dd44ce337abbf49101c34a2620df06696ba51a0aa91df66ddaa78cdccd4892808ad88b1dd457c5249ad73e06d