epel-package-announce June 2018

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Fedora EPEL 6 Update: R-qtl-1.42.8-1.el6.1
by updates＠fedoraproject.org 08 Jun '18

08 Jun '18

-------------------------------------------------------------------------------- Fedora EPEL Update Notification FEDORA-EPEL-2018-6c7fbce367 2018-06-08 21:07:01.515589 -------------------------------------------------------------------------------- Name : R-qtl Product : Fedora EPEL 6 Version : 1.42.8 Release : 1.el6.1 URL : http://www.rqtl.org/ Summary : Tools for analyzing QTL experiments Description : R-qtl is an extensible, interactive environment for mapping quantitative trait loci (QTLs) in experimental crosses. Our goal is to make complex QTL mapping methods widely accessible and allow users to focus on modeling rather than computing. A key component of computational methods for QTL mapping is the hidden Markov model (HMM) technology for dealing with missing genotype data. We have implemented the main HMM algorithms, with allowance for the presence of genotyping errors, for backcrosses, intercrosses, and phase-known four-way crosses. The current version of R-qtl includes facilities for estimating genetic maps, identifying genotyping errors, and performing single-QTL genome scans and two-QTL, two-dimensional genome scans, by interval mapping (with the EM algorithm), Haley-Knott regression, and multiple imputation. All of this may be done in the presence of covariates (such as sex, age or treatment). One may also fit higher-order QTL models by multiple imputation and Haley-Knott regression. -------------------------------------------------------------------------------- Update Information: Update R to 3.5.0. Rebuild rpy and rkward to match. rpy updated to 2.9.3 in Fedora 28. Disable javareconf scriptlet on ppc64. Rebuild compiled packages. -------------------------------------------------------------------------------- References: [ 1 ] Bug #1567573 - rpy-2.9.3 is available https://bugzilla.redhat.com/show_bug.cgi?id=1567573 [ 2 ] Bug #1570804 - R-3.5.0 is available https://bugzilla.redhat.com/show_bug.cgi?id=1570804 -------------------------------------------------------------------------------- This update can be installed with the "yum" update programs. Use su -c 'yum update R-qtl' at the command line. For more information, refer to "YUM", available at https://access.redhat.com/documentation/en-US/Red_Hat_Enterprise_Linux/7/ht… All packages are signed with the Fedora EPEL GPG key. More details on the GPG keys used by the Fedora Project can be found at https://fedoraproject.org/keys --------------------------------------------------------------------------------

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Fedora EPEL 6 Update: R-Rcpp-0.12.16-2.el6.1
by updates＠fedoraproject.org 08 Jun '18

08 Jun '18

-------------------------------------------------------------------------------- Fedora EPEL Update Notification FEDORA-EPEL-2018-6c7fbce367 2018-06-08 21:07:01.515589 -------------------------------------------------------------------------------- Name : R-Rcpp Product : Fedora EPEL 6 Version : 0.12.16 Release : 2.el6.1 URL : https://cran.r-project.org/web/packages/Rcpp/ Summary : Seamless R and C++ Integration Description : The Rcpp package provides R functions as well as C++ classes which offer a seamless integration of R and C++. Many R data types and objects can be mapped back and forth to C++ equivalents which facilitates both writing of new code as well as easier integration of third-party libraries. Documentation about Rcpp is provided by several vignettes included in this package, via the Rcpp Gallery site at http://gallery.rcpp.org, the paper by Eddelbuettel and Francois (2011, JSS), and the book by Eddelbuettel (2013, Springer). See citation("Rcpp") for details on the last two. -------------------------------------------------------------------------------- Update Information: Update R to 3.5.0. Rebuild rpy and rkward to match. rpy updated to 2.9.3 in Fedora 28. Disable javareconf scriptlet on ppc64. Rebuild compiled packages. -------------------------------------------------------------------------------- References: [ 1 ] Bug #1567573 - rpy-2.9.3 is available https://bugzilla.redhat.com/show_bug.cgi?id=1567573 [ 2 ] Bug #1570804 - R-3.5.0 is available https://bugzilla.redhat.com/show_bug.cgi?id=1570804 -------------------------------------------------------------------------------- This update can be installed with the "yum" update programs. Use su -c 'yum update R-Rcpp' at the command line. For more information, refer to "YUM", available at https://access.redhat.com/documentation/en-US/Red_Hat_Enterprise_Linux/7/ht… All packages are signed with the Fedora EPEL GPG key. More details on the GPG keys used by the Fedora Project can be found at https://fedoraproject.org/keys --------------------------------------------------------------------------------

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Fedora EPEL 7 Update: python-distroinfo-0.0.1-3.el7
by updates＠fedoraproject.org 07 Jun '18

07 Jun '18

-------------------------------------------------------------------------------- Fedora EPEL Update Notification FEDORA-EPEL-2018-773e0f2a12 2018-06-07 12:46:31.013656 -------------------------------------------------------------------------------- Name : python-distroinfo Product : Fedora EPEL 7 Version : 0.0.1 Release : 3.el7 URL : https://github.com/softwarefactory-project/distroinfo Summary : Parsing and querying distribution metadata stored in text/YAML files Description : distroinfo is a python module for parsing, validating and querying distribution/packaging metadata stored in human readable and review-able text/YAML files. distroinfo is a generic (re)implementation of rdoinfo parser which proved well suited for the task of interfacing with distribution metadata in a human friendly way. If you consider code reviews human friendly, that is. -------------------------------------------------------------------------------- Update Information: Initial package build. -------------------------------------------------------------------------------- References: [ 1 ] Bug #1582276 - Review Request: python-distroinfo - packaging metadata interface https://bugzilla.redhat.com/show_bug.cgi?id=1582276 -------------------------------------------------------------------------------- This update can be installed with the "yum" update programs. Use su -c 'yum update python-distroinfo' at the command line. For more information, refer to "YUM", available at https://access.redhat.com/documentation/en-US/Red_Hat_Enterprise_Linux/7/ht… All packages are signed with the Fedora EPEL GPG key. More details on the GPG keys used by the Fedora Project can be found at https://fedoraproject.org/keys --------------------------------------------------------------------------------

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Fedora EPEL 7 Update: mailgraph-1.14-31.el7
by updates＠fedoraproject.org 07 Jun '18

07 Jun '18

-------------------------------------------------------------------------------- Fedora EPEL Update Notification FEDORA-EPEL-2018-553f48d153 2018-06-07 12:46:31.013678 -------------------------------------------------------------------------------- Name : mailgraph Product : Fedora EPEL 7 Version : 1.14 Release : 31.el7 URL : http://mailgraph.schweikert.ch/ Summary : A RRDtool frontend for Mail statistics Description : Mailgraph is a very simple mail statistics RRDtool frontend for Postfix and Sendmail that produces daily, weekly, monthly and yearly graphs of received/sent and bounced/rejected mail. -------------------------------------------------------------------------------- Update Information: Build for epel7 -------------------------------------------------------------------------------- References: [ 1 ] Bug #1232258 - None https://bugzilla.redhat.com/show_bug.cgi?id=1232258 -------------------------------------------------------------------------------- This update can be installed with the "yum" update programs. Use su -c 'yum update mailgraph' at the command line. For more information, refer to "YUM", available at https://access.redhat.com/documentation/en-US/Red_Hat_Enterprise_Linux/7/ht… All packages are signed with the Fedora EPEL GPG key. More details on the GPG keys used by the Fedora Project can be found at https://fedoraproject.org/keys --------------------------------------------------------------------------------

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Fedora EPEL 7 Update: acme-tiny-4.0.4-1.el7
by updates＠fedoraproject.org 07 Jun '18

07 Jun '18

-------------------------------------------------------------------------------- Fedora EPEL Update Notification FEDORA-EPEL-2018-65660d9490 2018-06-07 12:46:31.013605 -------------------------------------------------------------------------------- Name : acme-tiny Product : Fedora EPEL 7 Version : 4.0.4 Release : 1.el7 URL : https://github.com/diafygi/acme-tiny Summary : Tiny auditable script to issue, renew Let's Encrypt certificates Description : This is a tiny, auditable script that you can throw on your server to issue and renew Let's Encrypt certificates. Since it has to be run on your server and have access to your private Let's Encrypt account key, I tried to make it as tiny as possible (currently less than 200 lines). The only prerequisites are python and openssl. Well, that and a web server - but then you only need this with a web server. This package adds a simple directory layout and timer service that runs acme_tiny on installed CSRs as the acme user for privilege separation. -------------------------------------------------------------------------------- Update Information: Incorporate new upstream release. Split acme_tiny.py into acme-tiny-core subpackage for use by other frameworks. -------------------------------------------------------------------------------- References: [ 1 ] Bug #1560531 - acme-tiny-4.0.4 is available https://bugzilla.redhat.com/show_bug.cgi?id=1560531 [ 2 ] Bug #1438181 - Split acme-tiny and wrapper scripts https://bugzilla.redhat.com/show_bug.cgi?id=1438181 -------------------------------------------------------------------------------- This update can be installed with the "yum" update programs. Use su -c 'yum update acme-tiny' at the command line. For more information, refer to "YUM", available at https://access.redhat.com/documentation/en-US/Red_Hat_Enterprise_Linux/7/ht… All packages are signed with the Fedora EPEL GPG key. More details on the GPG keys used by the Fedora Project can be found at https://fedoraproject.org/keys --------------------------------------------------------------------------------

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[SECURITY] Fedora EPEL 7 Update: gifsicle-1.91-1.el7
by updates＠fedoraproject.org 06 Jun '18

06 Jun '18

-------------------------------------------------------------------------------- Fedora EPEL Update Notification FEDORA-EPEL-2018-860176245e 2018-06-06 13:00:24.913144 -------------------------------------------------------------------------------- Name : gifsicle Product : Fedora EPEL 7 Version : 1.91 Release : 1.el7 URL : http://www.lcdf.org/gifsicle/ Summary : Powerful program for manipulating GIF images and animations Description : Gifsicle is a command-line tool for creating, editing, and getting information about GIF images and animations. Some more gifsicle features: * Batch mode for changing GIFs in place. * Prints detailed information about GIFs, including comments. * Control over interlacing, comments, looping, transparency... * Creates well-behaved GIFs: removes redundant colors, only uses local color tables if it absolutely has to (local color tables waste space and can cause viewing artifacts), etc. * It can shrink colormaps and change images to use the Web-safe palette (or any colormap you choose). * It can optimize your animations! This stores only the changed portion of each frame, and can radically shrink your GIFs. You can also use transparency to make them even smaller. Gifsicle?s optimizer is pretty powerful, and usually reduces animations to within a couple bytes of the best commercial optimizers. * Unoptimizing animations, which makes them easier to edit. * A dumb-ass name. One other program is included with gifsicle and gifdiff compares two GIFs for identical visual appearance. -------------------------------------------------------------------------------- Update Information: Update to 1.91 - fixes double-free in read_gif -------------------------------------------------------------------------------- References: [ 1 ] Bug #1114293 - gifsicle-1.91 is available https://bugzilla.redhat.com/show_bug.cgi?id=1114293 [ 2 ] Bug #1542036 - CVE-2017-18120 gifsicle: Double-free in the read_gif function [epel-all] https://bugzilla.redhat.com/show_bug.cgi?id=1542036 -------------------------------------------------------------------------------- This update can be installed with the "yum" update programs. Use su -c 'yum update gifsicle' at the command line. For more information, refer to "YUM", available at https://access.redhat.com/documentation/en-US/Red_Hat_Enterprise_Linux/7/ht… All packages are signed with the Fedora EPEL GPG key. More details on the GPG keys used by the Fedora Project can be found at https://fedoraproject.org/keys --------------------------------------------------------------------------------

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Fedora EPEL 7 Update: git-lfs-2.4.0-3.el7
by updates＠fedoraproject.org 06 Jun '18

06 Jun '18

-------------------------------------------------------------------------------- Fedora EPEL Update Notification FEDORA-EPEL-2018-a1882988d0 2018-06-06 13:00:24.913126 -------------------------------------------------------------------------------- Name : git-lfs Product : Fedora EPEL 7 Version : 2.4.0 Release : 3.el7 URL : https://git-lfs.github.io/ Summary : Git extension for versioning large files Description : Git Large File Storage (LFS) replaces large files such as audio samples, videos, datasets, and graphics with text pointers inside Git, while storing the file contents on a remote server. -------------------------------------------------------------------------------- Update Information: - Fix %preun to correctly remove the lfs filter on uninstall (rhbz#1580357) -------------------------------------------------------------------------------- References: [ 1 ] Bug #1580357 - install complains about no repo; uninstall does not remove /etc/gitconfig config entries https://bugzilla.redhat.com/show_bug.cgi?id=1580357 -------------------------------------------------------------------------------- This update can be installed with the "yum" update programs. Use su -c 'yum update git-lfs' at the command line. For more information, refer to "YUM", available at https://access.redhat.com/documentation/en-US/Red_Hat_Enterprise_Linux/7/ht… All packages are signed with the Fedora EPEL GPG key. More details on the GPG keys used by the Fedora Project can be found at https://fedoraproject.org/keys --------------------------------------------------------------------------------

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Fedora EPEL 7 Update: rpkg-1.54-2.el7
by updates＠fedoraproject.org 06 Jun '18

06 Jun '18

-------------------------------------------------------------------------------- Fedora EPEL Update Notification FEDORA-EPEL-2018-69704fa410 2018-06-06 13:00:24.913107 -------------------------------------------------------------------------------- Name : rpkg Product : Fedora EPEL 7 Version : 1.54 Release : 2.el7 URL : https://pagure.io/rpkg Summary : Python library for interacting with rpm+git Description : Python library for interacting with rpm+git -------------------------------------------------------------------------------- Update Information: - Remove koji and rpm-py-installer Python package requires - Fix argparse version for el6 ---- - Pass the -s/--set-default-stream to mbs-manager for module local builds. (jkaluza) - Write mock config correctly when run in Py 3 (cqi) - Add --with and --without options to 'local' - rhbz#1533416 (tmz) - Add a test for 3f93433 (cqi) - Raise error if rpm command returns non-zero (cqi) - Use getpass.getuser() instead of pwd.getpwuid(os.getuid())[0] (jpopelka) - Allow setting custom MBS config file and config section in rpkg.conf. (jkaluza) - Remove py35 testenv (cqi) - Ignore .env and tags (cqi) - Remove question mark from giturl (cqi) - Added custom ArgumentParser (supports allow_abbrev) (jkucera) - Grab the correct first line in case of rpm output (zebob.m) ---- - Require python2-koji 1.15 as the minimum version - Refine BuildRequires -------------------------------------------------------------------------------- References: [ 1 ] Bug #1579367 - pkg_resources.DistributionNotFound: The 'rpm-py-installer' distribution was not found and is required by rpkg https://bugzilla.redhat.com/show_bug.cgi?id=1579367 [ 2 ] Bug #1533416 - RFE: please add --with/--without options to fedpkg local https://bugzilla.redhat.com/show_bug.cgi?id=1533416 -------------------------------------------------------------------------------- This update can be installed with the "yum" update programs. Use su -c 'yum update rpkg' at the command line. For more information, refer to "YUM", available at https://access.redhat.com/documentation/en-US/Red_Hat_Enterprise_Linux/7/ht… All packages are signed with the Fedora EPEL GPG key. More details on the GPG keys used by the Fedora Project can be found at https://fedoraproject.org/keys --------------------------------------------------------------------------------

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Fedora EPEL 7 Update: nodejs-rhea-0.2.12-1.el7
by updates＠fedoraproject.org 06 Jun '18

06 Jun '18

-------------------------------------------------------------------------------- Fedora EPEL Update Notification FEDORA-EPEL-2018-d355f991f6 2018-06-06 13:00:24.913088 -------------------------------------------------------------------------------- Name : nodejs-rhea Product : Fedora EPEL 7 Version : 0.2.12 Release : 1.el7 URL : https://github.com/grs/rhea Summary : A reactive messaging library based on the AMQP protocol Description : A reactive library for the AMQP protocol. -------------------------------------------------------------------------------- Update Information: Rebase to 0.2.12. -------------------------------------------------------------------------------- References: [ 1 ] Bug #1560772 - nodejs-rhea-0.2.12 is available https://bugzilla.redhat.com/show_bug.cgi?id=1560772 -------------------------------------------------------------------------------- This update can be installed with the "yum" update programs. Use su -c 'yum update nodejs-rhea' at the command line. For more information, refer to "YUM", available at https://access.redhat.com/documentation/en-US/Red_Hat_Enterprise_Linux/7/ht… All packages are signed with the Fedora EPEL GPG key. More details on the GPG keys used by the Fedora Project can be found at https://fedoraproject.org/keys --------------------------------------------------------------------------------

1 0

Fedora EPEL 7 Update: rubygem-qpid_proton-0.22.0-1.el7
by updates＠fedoraproject.org 06 Jun '18

06 Jun '18

-------------------------------------------------------------------------------- Fedora EPEL Update Notification FEDORA-EPEL-2018-b9945a8624 2018-06-06 13:00:24.913070 -------------------------------------------------------------------------------- Name : rubygem-qpid_proton Product : Fedora EPEL 7 Version : 0.22.0 Release : 1.el7 URL : http://qpid.apache.org/proton Summary : Ruby language bindings for the Qpid Proton messaging framework Description : Proton is a high performance, lightweight messaging library. It can be used in the widest range of messaging applications including brokers, client libraries, routers, bridges, proxies, and more. Proton is based on the AMQP 1.0 messaging standard. -------------------------------------------------------------------------------- Update Information: Rebase to 0.22.0. -------------------------------------------------------------------------------- This update can be installed with the "yum" update programs. Use su -c 'yum update rubygem-qpid_proton' at the command line. For more information, refer to "YUM", available at https://access.redhat.com/documentation/en-US/Red_Hat_Enterprise_Linux/7/ht… All packages are signed with the Fedora EPEL GPG key. More details on the GPG keys used by the Fedora Project can be found at https://fedoraproject.org/keys --------------------------------------------------------------------------------

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epel-package-announce June 2018