At Kitware we are heavily engaged in medical research and so our requirements are towards high-end scientific computing software. The open source tools that we use, and the general requirements that they address are:

+ VTK- the visualization toolkit for 3D rendering, interaction, volume rendering, and informatics vtk.org
+ ITK- the Insight segmentation and registration toolkit for image processing, segmentation and registration itk.org
+ 3D Slicer- a clinical research platform built on open-source tools like VTK and VTK slicer.org
+ IGSTK- the image guided surgery toolkit with device tracking and display igstk,org
+ MIDAS- multimedia data server which is used for storing, accessing and processing medical data http://www.kitware.com/midasindex.html

and because we have significant concerns about software quality and regulatory control we use the CMake/CTest/CDash suite of software process tools cmake.org and cdash.org. Finally, GUI development and integration tools are typically Qt and Python.

To actually see how these tools are used, look at the NAMIC web pages na-mic.org and wiki http://www.na-mic.org/Wiki/index.php/Main_Page. NAMIC is one of seven US National Centers for Biomedical Computing funded by the NIH and the licenses used by the NAMIC suite of software are generally BSD or LGPL.

Will


On Fri, Jan 29, 2010 at 1:00 AM, susmit shannigrahi <thinklinux.ssh@gmail.com> wrote:
Hi,

As we agreed about finding out the requirements of practitioners, it
would be nice to get them listed.
It may seem like a foolish question, but bear with me. :)

1. In general practice what are the tasks that need uses of software?

Thanks.


--
Regards,
Susmit.

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--
William J. Schroeder, PhD
Kitware, Inc.
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will.schroeder@kitware.com
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(518) 881-4902