Fedora 35 Update: jmol-14.31.59-1.fc35
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Fedora Update Notification
FEDORA-2021-3423b15ce6
2021-10-31 01:07:25.016630
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Name : jmol
Product : Fedora 35
Version : 14.31.59
Release : 1.fc35
URL : http://www.jmol.org/
Summary : Java viewer for chemical structures in 3D
Description :
Jmol is a free, open source molecule viewer for students, educators,
and researchers in chemistry and biochemistry.
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Update Information:
Changes in jmol 14.31.55: - new feature: `COMPARE {2.1} {1.1} BONDS SMILES
HYDROGEN` - adds `HYDROGEN` check for aligning methyl and methylene groups
properly - bug fix: `(-1.4567).format("%5.2f")` missing minus sign - bug fix:
`UnitCell` transform should be included in `COMPARE FRAME` - bug fix:
`CifReader` fix for lack of case sensitivity in some `GEOM_*` records for some
COD and CCDC files - bug fix: `FilesReader` fails with zip file pipe - bug fix:
Polyhedra `SMILES` not working for chirality check -- was never fully tested -
bug fix: Resolver can fail for certain CIF files resolved to MOL incorrectly -
bug fix: TopoCif update - new feature: `COMPARE` additions: ``` // compare
FRAMES` // compare {model1} {model2} POLYHEDRA // compare {model1}
{model2} SUBSET {polyhedra} POLYHEDRA // compare {model1} {model2} ATOMS
@atom1 @atom2 POLYHEDRA // compare FRAMES POLYHEDRA ``` - new feature:
`compare()` additions ``` // A, B, int[] map // A, B, int[] map,
stddev ``` Changes in jmol 14.31.56: - bug fix: `compare({2.1}, {1.1}, "map",
"H")` broken Changes in jmol 14.31.57: - bug fix: `magCIF` can not handle
fractions 2/5, 3/10, etc. Changes in jmol 14.31.58: - bug fix: adjustments to
`TopoCifParser` pre-release of `Topology.dic` Changes in jmol 14.31.59: - bug
fix: `CIFReader` should allow unlooped items for all needed tags - bug fix:
`JSpecView` writer broken in 14.31.50
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ChangeLog:
* Thu Oct 21 2021 Jerry James <loganjerry(a)gmail.com> - 14.31.59-1
- Version 14.31.59
* Mon Oct 11 2021 Jerry James <loganjerry(a)gmail.com> - 14.31.57-1
- Version 14.31.57
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References:
[ 1 ] Bug #2009046 - jmol-14.31.57 is available
https://bugzilla.redhat.com/show_bug.cgi?id=2009046
[ 2 ] Bug #2015353 - jmol-14.31.59 is available
https://bugzilla.redhat.com/show_bug.cgi?id=2015353
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This update can be installed with the "dnf" update program. Use
su -c 'dnf upgrade --advisory FEDORA-2021-3423b15ce6' at the command
line. For more information, refer to the dnf documentation available at
http://dnf.readthedocs.io/en/latest/command_ref.html#upgrade-command-label
All packages are signed with the Fedora Project GPG key. More details on the
GPG keys used by the Fedora Project can be found at
https://fedoraproject.org/keys
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