Fedora 16 Update: R-GenomicFeatures-1.6.1-1.fc16
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Fedora Update Notification
FEDORA-2011-15910
2011-11-15 23:36:23
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Name : R-GenomicFeatures
Product : Fedora 16
Version : 1.6.1
Release : 1.fc16
URL : http://bioconductor.org/packages/2.9/bioc/html/GenomicFeatures.html
Summary : Tools for making and manipulating transcript centric annotations
Description :
A set of tools and methods for making and manipulating transcript centric
annotations. With these tools the user can easily download the genomic
locations of the transcripts, exons and cds of a given organism, from either
the UCSC Genome Browser or a BioMart database (more sources will be supported
in the future). This information is then stored in a local database that
keeps track of the relationship between transcripts, exons, cds and genes.
Flexible methods are provided for extracting the desired features in a
convenient format.
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Update Information:
Update R to 2.14.0. This required a mass rebuild of R components.
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ChangeLog:
* Wed Nov 9 2011 Tom Callaway <spot(a)fedoraproject.org> - 1.6.1-1
- update to 1.6.1
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References:
[ 1 ] Bug #751003 - New version of R 2.14.0 is available
https://bugzilla.redhat.com/show_bug.cgi?id=751003
[ 2 ] Bug #753188 - Review Request: R-rtracklayer - R interface to genome browsers and
their annotation tracks
https://bugzilla.redhat.com/show_bug.cgi?id=753188
[ 3 ] Bug #753181 - Review Request: R-RCurl - General network (HTTP/FTP) client
interface for R
https://bugzilla.redhat.com/show_bug.cgi?id=753181
[ 4 ] Bug #753182 - Review Request: R-biomaRt - R Interface to BioMart databases
https://bugzilla.redhat.com/show_bug.cgi?id=753182
[ 5 ] Bug #753185 - Review Request: R-Rcompression - R Package for in-memory
compression
https://bugzilla.redhat.com/show_bug.cgi?id=753185
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This update can be installed with the "yum" update program. Use
su -c 'yum update R-GenomicFeatures' at the command line.
For more information, refer to "Managing Software with yum",
available at http://docs.fedoraproject.org/yum/.
All packages are signed with the Fedora Project GPG key. More details on the
GPG keys used by the Fedora Project can be found at
https://fedoraproject.org/keys
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