[Bug 1657410] Review Request: python-nistats - Modeling and Statistical analysis of fMRI data in Python

https://bugzilla.redhat.com/show_bug.cgi?id=1657410

Elliott Sales de Andrade  changed:

What    |Removed                     |Added
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             Status|NEW                         |ASSIGNED
                 CC|                            |[e-mail]
           Assignee|[e-mail]    |[e-mail]

--- Comment #1 from Elliott Sales de Andrade  ---
> # Downloads data. All tests pass locally in mock
> # mock -r fedora-rawhide-x86_64 rebuild <srpm> --enable-network --rpmbuild-opts="--with tests"
> %bcond_with tests

Surely not all of them? You could select out the ones that actually use the
network?
> This work is made available by a community of people, amongst which the INRIA
> Parietal Project Team and D esposito lab at Berkeley.

There's an apostrophe missing in the name here.
> Version:        0.0.1b
> Release:        1%{?dist}

Prerelease information (b) belongs in the Release tag, which should start with
0:
https://docs.fedoraproject.org/en-US/packaging-guidelines/Versioning/#_prere...
> # Not in setup.py so generator probably wont pick them up

Try sending a patch upstream? Actually, are you sure you need these? I see
duplicate python3.7dist() and python3dist() requirements on the result.

Both numpydoc and sphinx_gallery are bundled. They're only used for building
docs, but maybe petition upstream to stop doing that?

Package Review
==============

Legend:
[x] = Pass, [!] = Fail, [-] = Not applicable, [?] = Not evaluated
[ ] = Manual review needed

===== MUST items =====

Generic:
[x]: Package is licensed with an open-source compatible license and meets
     other legal requirements as defined in the legal section of Packaging
     Guidelines.
[x]: License field in the package spec file matches the actual license.
     Note: Checking patched sources after %prep for licenses. Licenses
     found: "BSD (3 clause)", "BSD (unspecified)", "Unknown or generated",
     "*No copyright* BSD (unspecified)". 129 files have unknown license.
     Detailed output of licensecheck in 1657410-python-nistats/licensecheck.txt
[x]: License file installed when any subpackage combination is installed.
[x]: Package must own all directories that it creates.
     Note: Directories without known owners: /usr/lib/python3.7/site-
     packages, /usr/lib/python3.7
[!]: Package contains no bundled libraries without FPC exception.
[x]: Changelog in prescribed format.
[x]: Sources contain only permissible code or content.
[-]: Package contains desktop file if it is a GUI application.
[-]: Development files must be in a -devel package
[x]: Package uses nothing in %doc for runtime.
[x]: Package consistently uses macros (instead of hard-coded directory
     names).
[x]: Package is named according to the Package Naming Guidelines.
[?]: Package does not generate any conflict.
[x]: Package obeys FHS, except libexecdir and /usr/target.
[-]: If the package is a rename of another package, proper Obsoletes and
     Provides are present.
[!]: Requires correct, justified where necessary.
[x]: Spec file is legible and written in American English.
[-]: Package contains systemd file(s) if in need.
[x]: Package is not known to require an ExcludeArch tag.
[x]: Large documentation must go in a -doc subpackage. Large could be size
     (~1MB) or number of files.
     Note: Documentation size is 10240 bytes in 2 files.
[x]: Package complies to the Packaging Guidelines
[x]: Package successfully compiles and builds into binary rpms on at least
     one supported primary architecture.
[x]: Package installs properly.
[x]: Rpmlint is run on all rpms the build produces.
     Note: There are rpmlint messages (see attachment).
[x]: If (and only if) the source package includes the text of the
     license(s) in its own file, then that file, containing the text of the
     license(s) for the package is included in %license.
[x]: Package requires other packages for directories it uses.
[x]: Package does not own files or directories owned by other packages.
[x]: All build dependencies are listed in BuildRequires, except for any
     that are listed in the exceptions section of Packaging Guidelines.
[x]: Package uses either %{buildroot} or $RPM_BUILD_ROOT
[x]: Package does not run rm -rf %{buildroot} (or $RPM_BUILD_ROOT) at the
     beginning of %install.
[x]: Macros in Summary, %description expandable at SRPM build time.
[x]: Dist tag is present.
[x]: Package does not contain duplicates in %files.
[x]: Permissions on files are set properly.
[x]: Package use %makeinstall only when make install DESTDIR=... doesn't
     work.
[x]: Package is named using only allowed ASCII characters.
[x]: Package does not use a name that already exists.
[x]: Package is not relocatable.
[x]: Sources used to build the package match the upstream source, as
     provided in the spec URL.
[x]: Spec file name must match the spec package %{name}, in the format
     %{name}.spec.
[x]: File names are valid UTF-8.
[x]: Packages must not store files under /srv, /opt or /usr/local

Python:
[x]: Python eggs must not download any dependencies during the build
     process.
[x]: A package which is used by another package via an egg interface should
     provide egg info.
[x]: Package meets the Packaging Guidelines::Python
[x]: Package contains BR: python2-devel or python3-devel
[x]: Binary eggs must be removed in %prep

===== SHOULD items =====

Generic:
[-]: If the source package does not include license text(s) as a separate
     file from upstream, the packager SHOULD query upstream to include it.
[!]: Final provides and requires are sane (see attachments).
[x]: Fully versioned dependency in subpackages if applicable.
     Note: No Requires: %{name}%{?_isa} = %{version}-%{release} in
     python3-nistats , python-nistats-doc
[?]: Package functions as described.
[x]: Latest version is packaged.
[x]: Package does not include license text files separate from upstream.
[-]: Description and summary sections in the package spec file contains
     translations for supported Non-English languages, if available.
[?]: Package should compile and build into binary rpms on all supported
     architectures.
[x]: %check is present and all tests pass.
[x]: Packages should try to preserve timestamps of original installed
     files.
[x]: Reviewer should test that the package builds in mock.
[x]: Buildroot is not present
[x]: Package has no %clean section with rm -rf %{buildroot} (or
     $RPM_BUILD_ROOT)
[x]: No file requires outside of /etc, /bin, /sbin, /usr/bin, /usr/sbin.
[x]: Packager, Vendor, PreReq, Copyright tags should not be in spec file
[x]: Sources can be downloaded from URI in Source: tag
[x]: SourceX is a working URL.
[x]: Spec use %global instead of %define unless justified.

===== EXTRA items =====

Generic:
[x]: Rpmlint is run on all installed packages.
     Note: There are rpmlint messages (see attachment).
[x]: Spec file according to URL is the same as in SRPM.

Rpmlint
-------
Checking: python3-nistats-0.0.1b-1.fc30.noarch.rpm
          python-nistats-doc-0.0.1b-1.fc30.noarch.rpm
          python-nistats-0.0.1b-1.fc30.src.rpm
python3-nistats.noarch: W: spelling-error Summary(en_US) fMRI -> MRI, f MRI,
firm
python3-nistats.noarch: W: spelling-error %description -l en_US nilearn -> nil
earn, nil-earn, learner
python3-nistats.noarch: W: spelling-error %description -l en_US neuroimaging ->
micromanaging
python3-nistats.noarch: W: spelling-error %description -l en_US amongst ->
among st, among-st, among
python3-nistats.noarch: W: spelling-error %description -l en_US esposito ->
expositor
python3-nistats.noarch: W: spelling-error %description -l en_US nipy -> nip,
nippy, nips
python-nistats-doc.noarch: W: spelling-error Summary(en_US) fMRI -> MRI, f MRI,
firm
python-nistats.src: W: spelling-error Summary(en_US) fMRI -> MRI, f MRI, firm
python-nistats.src: W: spelling-error %description -l en_US nilearn -> nil
earn, nil-earn, learner
python-nistats.src: W: spelling-error %description -l en_US neuroimaging ->
micromanaging
python-nistats.src: W: spelling-error %description -l en_US amongst -> among
st, among-st, among
python-nistats.src: W: spelling-error %description -l en_US esposito ->
expositor
python-nistats.src: W: spelling-error %description -l en_US nipy -> nip, nippy,
nips
3 packages and 0 specfiles checked; 0 errors, 13 warnings.

Rpmlint (installed packages)
----------------------------
Cannot parse rpmlint output:

Requires
--------
python3-nistats (rpmlib, GLIBC filtered):
    python(abi)
    python3.7dist(nibabel)
    python3.7dist(nilearn)
    python3.7dist(numpy)
    python3.7dist(pandas)
    python3.7dist(patsy)
    python3.7dist(scikit-learn)
    python3.7dist(scipy)
    python3dist(nibabel)
    python3dist(nilearn)
    python3dist(numpy)
    python3dist(pandas)
    python3dist(patsy)
    python3dist(scikit-learn)
    python3dist(scipy)

python-nistats-doc (rpmlib, GLIBC filtered):

Provides
--------
python3-nistats:
    python3-nistats
    python3.7dist(nistats)
    python3dist(nistats)

python-nistats-doc:
    python-nistats-doc

Source checksums
----------------
https://github.com/nistats/nistats/archive/rel0.0.1b/python-nistats-0.0.1b.t...
:
  CHECKSUM(SHA256) this package     :
61134ba4b140a327ca2b94c289b77eda05ec895046f5c636149b4d335bb99480
  CHECKSUM(SHA256) upstream package :
61134ba4b140a327ca2b94c289b77eda05ec895046f5c636149b4d335bb99480

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