[EPEL-devel] Fedora EPEL 7 updates-testing report
updates at fedoraproject.org
updates at fedoraproject.org
Mon May 11 23:53:51 UTC 2015
The following Fedora EPEL 7 Security updates need testing:
Age URL
180 https://admin.fedoraproject.org/updates/FEDORA-EPEL-2014-3989/cross-binutils-2.23.88.0.1-2.el7.1
64 https://admin.fedoraproject.org/updates/FEDORA-EPEL-2015-1087/dokuwiki-0-0.24.20140929c.el7
64 https://admin.fedoraproject.org/updates/FEDORA-EPEL-2015-0952/qpid-qmf-0.28-27.el7,qpid-cpp-0.30-12.el7
47 https://admin.fedoraproject.org/updates/FEDORA-EPEL-2015-1421/quassel-0.11.0-2.el7
40 https://admin.fedoraproject.org/updates/FEDORA-EPEL-2015-1545/strongswan-5.3.0-1.el7
15 https://admin.fedoraproject.org/updates/FEDORA-EPEL-2015-6006/dpkg-1.16.16-5.el7
13 https://admin.fedoraproject.org/updates/FEDORA-EPEL-2015-6030/proftpd-1.3.5-5.el7
5 https://admin.fedoraproject.org/updates/FEDORA-EPEL-2015-6122/libssh-0.6.5-1.el7
3 https://admin.fedoraproject.org/updates/FEDORA-EPEL-2015-5937/wordpress-4.2.2-1.el7
1 https://admin.fedoraproject.org/updates/FEDORA-EPEL-2015-6203/php-ZendFramework2-2.3.8-1.el7
The following builds have been pushed to Fedora EPEL 7 updates-testing
cube-4.3.1-1.el7
hscolour-1.20.3-8.el7
opendkim-2.10.2-1.el7
otf2-1.5.1-1.el7
perl-Fsdb-2.58-1.el7
scorep-1.4.1-2.el7
xpdf-3.04-9.el7
Details about builds:
================================================================================
cube-4.3.1-1.el7 (FEDORA-EPEL-2015-6180)
CUBE Uniform Behavioral Encoding generic presentation component
--------------------------------------------------------------------------------
Update Information:
Score-P 1.4:
Major features:
- Basic support for OpenCL instrumentation.
- For GCC versions 4.5 till 4.9 a new function instrumentation is available via the plug-in interface of the compiler. This new function instrumentation greatly improves the measurement performance. It also provides compile-time instrumentation filtering using the same filter file format as the run-time filtering. On some systems the GCC plug-in dev package needs to be installed, in order to provide the necessary header files.
Features and improvements:
- Support for pthread_exit and pthread_cancel was added.
- Added support for task migration in the profiling system.
- Added support for Intel Xeon Phi systems (native mode only)
- Added new user instrumentation macros (e.g., SCOREP_USER_REGION_BY_NAME_BEGIN( name, type ) and SCOREP_USER_REGION_BY_NAME_END( name )). These macros can annotate user regions without the need to take care about the handle struct.
User tools and API improvements and changes:
- Due to the added task migration support, the default for the invokation of OPARI2 in the instrumenter was changed. Until now, the instrumenter let OPARI2 make all tasks tied and print a warning if an untied task was encountered. The new default is that the untied tasks are left untied and no warning is printed.
- The task related data storage mechanism was changed. The profiling backend does not use a hash table to associate a task id with a data structure anymore, but gets a pointer from the task management in the measurement core. Thus, the environment variable SCOREP_PROFILING_TASK_TABLE_SIZE to specify the size of the hash table disappeared.
- Added the environment variable SCOREP_PROFILING_TASK_EXCHANGE_NUM to specify how ofter the profiling system returns reallocated memory objects that have migrated to another thread.
- Support for cobi was removed.
- SCOREP_User_RegionBegin / SCOREP_User_RegionInit accept NULL as parameter value for lastFileName and lastFileHandle. This simplifies the calls to these functions when used directly without the provided macros.
- score-score got a new option: -m allows to display mangled region names. Furthermore, the filter evalution in scorep-score can also use mangled names, too.
Bugfixes:
- In some cases, not all regions are exited at measurement finalization time. Fixed.
- Using PGI compiler instrumentation in conjunction with tasks could lead wrong region handles in region exits. Fixed.
- Fix building of MPI wrapper if compiler issues unrelated warnings at configure time.
- The SCOREP_USER_METRIC_UINT64 macro used signed values. Fixed.
- Add conflict in the instrumenter between --thread=pthread and --mutex=pthread.
- Fixed errors with libmpigf during linking of the instrumented application.
- Fixes wrong acquisition order in pthread_cond_timedwait by modifying the nesting level (analog pthread_cond_wait)
- Fixes that internal CUDA driver calls were recorded
- Fixes a potential deadlock in CUDA adapter for multithreaded CUDA
- Fortran OpenMP applications instrumented with OPARI2 and preprocessing report wrong file names ending in '.input.F' for POMP2 regions.
--------------------------------------------------------------------------------
ChangeLog:
* Tue May 5 2015 Orion Poplawski <orion at cora.nwra.com> - 4.3.1-1
- Update to 4.3.1
* Sat May 2 2015 Kalev Lember <kalevlember at gmail.com> - 4.2.3-5
- Rebuilt for GCC 5 C++11 ABI change
* Thu Mar 26 2015 Richard Hughes <rhughes at redhat.com> - 4.2.3-4
- Add an AppData file for the software center
* Tue Mar 3 2015 Peter Robinson <pbrobinson at fedoraproject.org> 4.2.3-3
- rebuild (gcc5)
* Sat Aug 16 2014 Fedora Release Engineering <rel-eng at lists.fedoraproject.org> - 4.2.3-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_22_Mass_Rebuild
--------------------------------------------------------------------------------
================================================================================
hscolour-1.20.3-8.el7 (FEDORA-EPEL-2015-6237)
Colorize Haskell code
--------------------------------------------------------------------------------
Update Information:
link HsColour against Haskell libraries statically
for easier ghc version bootstrapping
--------------------------------------------------------------------------------
ChangeLog:
* Thu Feb 27 2014 Jens Petersen <petersen at redhat.com> - 1.20.3-8
- link executable to Haskell libs statically for easier ghc package bootstrapping
* Sat Aug 3 2013 Fedora Release Engineering <rel-eng at lists.fedoraproject.org> - 1.20.3-7
- Rebuilt for https://fedoraproject.org/wiki/Fedora_20_Mass_Rebuild
--------------------------------------------------------------------------------
================================================================================
opendkim-2.10.2-1.el7 (FEDORA-EPEL-2015-6239)
A DomainKeys Identified Mail (DKIM) milter to sign and/or verify mail
--------------------------------------------------------------------------------
Update Information:
- Updated to use newer upstream 2.10.2 source code
- Removed patches for bugs fixed in upstream source
- Included support for systemd macros
- Added deprecated options notice to default configuration file
- Added new options to default configuration file
- Updated README.fedora with additional SQL useage info
--------------------------------------------------------------------------------
ChangeLog:
* Mon May 11 2015 Steve Jenkins <steve at stevejenkins.com> - 2.10.2-1
- Updated to use newer upstream 2.10.2 source code
- Removed patches for bugs fixed in upstream source
- Included support for systemd macros
- Added deprecated options notice to default configuration file
- Added new options to default configuration file
- Updated README.fedora with additional SQL useage info
--------------------------------------------------------------------------------
References:
[ 1 ] Bug #1220390 - opendkim-2.10.2 is available
https://bugzilla.redhat.com/show_bug.cgi?id=1220390
--------------------------------------------------------------------------------
================================================================================
otf2-1.5.1-1.el7 (FEDORA-EPEL-2015-6180)
Open Trace Format 2 library
--------------------------------------------------------------------------------
Update Information:
Score-P 1.4:
Major features:
- Basic support for OpenCL instrumentation.
- For GCC versions 4.5 till 4.9 a new function instrumentation is available via the plug-in interface of the compiler. This new function instrumentation greatly improves the measurement performance. It also provides compile-time instrumentation filtering using the same filter file format as the run-time filtering. On some systems the GCC plug-in dev package needs to be installed, in order to provide the necessary header files.
Features and improvements:
- Support for pthread_exit and pthread_cancel was added.
- Added support for task migration in the profiling system.
- Added support for Intel Xeon Phi systems (native mode only)
- Added new user instrumentation macros (e.g., SCOREP_USER_REGION_BY_NAME_BEGIN( name, type ) and SCOREP_USER_REGION_BY_NAME_END( name )). These macros can annotate user regions without the need to take care about the handle struct.
User tools and API improvements and changes:
- Due to the added task migration support, the default for the invokation of OPARI2 in the instrumenter was changed. Until now, the instrumenter let OPARI2 make all tasks tied and print a warning if an untied task was encountered. The new default is that the untied tasks are left untied and no warning is printed.
- The task related data storage mechanism was changed. The profiling backend does not use a hash table to associate a task id with a data structure anymore, but gets a pointer from the task management in the measurement core. Thus, the environment variable SCOREP_PROFILING_TASK_TABLE_SIZE to specify the size of the hash table disappeared.
- Added the environment variable SCOREP_PROFILING_TASK_EXCHANGE_NUM to specify how ofter the profiling system returns reallocated memory objects that have migrated to another thread.
- Support for cobi was removed.
- SCOREP_User_RegionBegin / SCOREP_User_RegionInit accept NULL as parameter value for lastFileName and lastFileHandle. This simplifies the calls to these functions when used directly without the provided macros.
- score-score got a new option: -m allows to display mangled region names. Furthermore, the filter evalution in scorep-score can also use mangled names, too.
Bugfixes:
- In some cases, not all regions are exited at measurement finalization time. Fixed.
- Using PGI compiler instrumentation in conjunction with tasks could lead wrong region handles in region exits. Fixed.
- Fix building of MPI wrapper if compiler issues unrelated warnings at configure time.
- The SCOREP_USER_METRIC_UINT64 macro used signed values. Fixed.
- Add conflict in the instrumenter between --thread=pthread and --mutex=pthread.
- Fixed errors with libmpigf during linking of the instrumented application.
- Fixes wrong acquisition order in pthread_cond_timedwait by modifying the nesting level (analog pthread_cond_wait)
- Fixes that internal CUDA driver calls were recorded
- Fixes a potential deadlock in CUDA adapter for multithreaded CUDA
- Fortran OpenMP applications instrumented with OPARI2 and preprocessing report wrong file names ending in '.input.F' for POMP2 regions.
--------------------------------------------------------------------------------
ChangeLog:
* Wed Feb 11 2015 Orion Poplawski <orion at cora.nwra.com> - 1.5.1-1
- Update to 1.5.1
* Sun Aug 17 2014 Fedora Release Engineering <rel-eng at lists.fedoraproject.org> - 1.4-3
- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_22_Mass_Rebuild
--------------------------------------------------------------------------------
================================================================================
perl-Fsdb-2.58-1.el7 (FEDORA-EPEL-2015-6242)
A set of commands for manipulating flat-text databases from the shell
--------------------------------------------------------------------------------
Update Information:
See http://www.isi.edu/~johnh/SOFTWARE/FSDB/
--------------------------------------------------------------------------------
ChangeLog:
* Thu Apr 30 2015 John Heidemann <johnh at isi.edu> 2.58-1
- See http://www.isi.edu/~johnh/SOFTWARE/FSDB/
--------------------------------------------------------------------------------
================================================================================
scorep-1.4.1-2.el7 (FEDORA-EPEL-2015-6180)
Scalable Performance Measurement Infrastructure for Parallel Codes
--------------------------------------------------------------------------------
Update Information:
Score-P 1.4:
Major features:
- Basic support for OpenCL instrumentation.
- For GCC versions 4.5 till 4.9 a new function instrumentation is available via the plug-in interface of the compiler. This new function instrumentation greatly improves the measurement performance. It also provides compile-time instrumentation filtering using the same filter file format as the run-time filtering. On some systems the GCC plug-in dev package needs to be installed, in order to provide the necessary header files.
Features and improvements:
- Support for pthread_exit and pthread_cancel was added.
- Added support for task migration in the profiling system.
- Added support for Intel Xeon Phi systems (native mode only)
- Added new user instrumentation macros (e.g., SCOREP_USER_REGION_BY_NAME_BEGIN( name, type ) and SCOREP_USER_REGION_BY_NAME_END( name )). These macros can annotate user regions without the need to take care about the handle struct.
User tools and API improvements and changes:
- Due to the added task migration support, the default for the invokation of OPARI2 in the instrumenter was changed. Until now, the instrumenter let OPARI2 make all tasks tied and print a warning if an untied task was encountered. The new default is that the untied tasks are left untied and no warning is printed.
- The task related data storage mechanism was changed. The profiling backend does not use a hash table to associate a task id with a data structure anymore, but gets a pointer from the task management in the measurement core. Thus, the environment variable SCOREP_PROFILING_TASK_TABLE_SIZE to specify the size of the hash table disappeared.
- Added the environment variable SCOREP_PROFILING_TASK_EXCHANGE_NUM to specify how ofter the profiling system returns reallocated memory objects that have migrated to another thread.
- Support for cobi was removed.
- SCOREP_User_RegionBegin / SCOREP_User_RegionInit accept NULL as parameter value for lastFileName and lastFileHandle. This simplifies the calls to these functions when used directly without the provided macros.
- score-score got a new option: -m allows to display mangled region names. Furthermore, the filter evalution in scorep-score can also use mangled names, too.
Bugfixes:
- In some cases, not all regions are exited at measurement finalization time. Fixed.
- Using PGI compiler instrumentation in conjunction with tasks could lead wrong region handles in region exits. Fixed.
- Fix building of MPI wrapper if compiler issues unrelated warnings at configure time.
- The SCOREP_USER_METRIC_UINT64 macro used signed values. Fixed.
- Add conflict in the instrumenter between --thread=pthread and --mutex=pthread.
- Fixed errors with libmpigf during linking of the instrumented application.
- Fixes wrong acquisition order in pthread_cond_timedwait by modifying the nesting level (analog pthread_cond_wait)
- Fixes that internal CUDA driver calls were recorded
- Fixes a potential deadlock in CUDA adapter for multithreaded CUDA
- Fortran OpenMP applications instrumented with OPARI2 and preprocessing report wrong file names ending in '.input.F' for POMP2 regions.
--------------------------------------------------------------------------------
ChangeLog:
* Mon May 11 2015 Orion Poplawski <orion at cora.nwra.com> - 1.4.1-2
- Require papi-devel, add requires to mpi packages
* Fri May 8 2015 Orion Poplawski <orion at cora.nwra.com> - 1.4.1-1
- Update to 1.4.1
* Tue May 5 2015 Orion Poplawski <orion at cora.nwra.com> - 1.4-1
- Update to 1.4
* Sun May 3 2015 Zbigniew Jędrzejewski-Szmek <zbyszek at in.waw.pl> - 1.3-7
- Rebuild for changed mpich
* Sat May 2 2015 Kalev Lember <kalevlember at gmail.com> - 1.3-6
- Rebuilt for GCC 5 C++11 ABI change
* Fri Mar 13 2015 Orion Poplawski <orion at cora.nwra.com> - 1.3-5
- Rebuild for mpich 3.1.4 soname change
* Wed Mar 4 2015 Orion Poplawski <orion at cora.nwra.com> - 1.3-4
- Rebuild for papi
* Mon Jan 19 2015 Marcin Juszkiewicz <mjuszkiewicz at redhat.com> - 1.3-3
- update gnu-config files to build on aarch64
--------------------------------------------------------------------------------
================================================================================
xpdf-3.04-9.el7 (FEDORA-EPEL-2015-6238)
A PDF file viewer for the X Window System
--------------------------------------------------------------------------------
Update Information:
Fix install conflicts with poppler-utils
--------------------------------------------------------------------------------
ChangeLog:
* Mon May 11 2015 Tom Callaway <spot at fedoraproject.org> - 1:3.04-9
- RHEL 7 does not need pdfdetach
* Sat May 2 2015 Kalev Lember <kalevlember at gmail.com> - 1:3.04-8
- Rebuilt for GCC 5 C++11 ABI change
--------------------------------------------------------------------------------
References:
[ 1 ] Bug #1219919 - xpdf not installable on epel7 because of dep conflicts
https://bugzilla.redhat.com/show_bug.cgi?id=1219919
--------------------------------------------------------------------------------
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