Fedora 15 Update: R-GenomicRanges-1.6.2-1.fc15

updates at fedoraproject.org updates at fedoraproject.org
Tue Nov 29 00:07:55 UTC 2011


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Fedora Update Notification
FEDORA-2011-15950
2011-11-15 23:42:05
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Name        : R-GenomicRanges
Product     : Fedora 15
Version     : 1.6.2
Release     : 1.fc15
URL         : http://www.bioconductor.org/packages/release/bioc/html/GenomicRanges.html
Summary     : Representation and manipulation of genomic intervals
Description :
The ability to efficiently store genomic annotations and alignments is
playing a central role when it comes to analyze high-throughput sequencing
data (a.k.a. NGS data). The package defines general purpose containers for
storing genomic intervals as well as more specialized containers for
storing alignments against a reference genome.

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Update Information:

Update R to 2.14.0. This required a mass rebuild of R components.
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ChangeLog:

* Wed Nov  9 2011 Tom Callaway <spot at fedoraproject.org> 1.6.2-1
- update to 1.6.2
* Sat Jul  2 2011 pingou <pingou at pingoured.fr> 1.4.6-1
- Update to version 1.4.6
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References:

  [ 1 ] Bug #751003 - New version of R 2.14.0 is available
        https://bugzilla.redhat.com/show_bug.cgi?id=751003
  [ 2 ] Bug #753188 - Review Request: R-rtracklayer - R interface to genome browsers and their annotation tracks
        https://bugzilla.redhat.com/show_bug.cgi?id=753188
  [ 3 ] Bug #753181 - Review Request: R-RCurl - General network (HTTP/FTP) client interface for R
        https://bugzilla.redhat.com/show_bug.cgi?id=753181
  [ 4 ] Bug #753182 - Review Request: R-biomaRt - R Interface to BioMart databases
        https://bugzilla.redhat.com/show_bug.cgi?id=753182
  [ 5 ] Bug #753185 - Review Request: R-Rcompression - R Package for in-memory compression
        https://bugzilla.redhat.com/show_bug.cgi?id=753185
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This update can be installed with the "yum" update program.  Use 
su -c 'yum update R-GenomicRanges' at the command line.
For more information, refer to "Managing Software with yum",
available at http://docs.fedoraproject.org/yum/.

All packages are signed with the Fedora Project GPG key.  More details on the
GPG keys used by the Fedora Project can be found at
https://fedoraproject.org/keys
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