Fedora 14 Update: samtools-0.1.18-1.fc14

updates at fedoraproject.org updates at fedoraproject.org
Sun Sep 18 00:57:26 UTC 2011


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Fedora Update Notification
FEDORA-2011-12168
2011-09-06 23:27:31
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Name        : samtools
Product     : Fedora 14
Version     : 0.1.18
Release     : 1.fc14
URL         : http://samtools.sourceforge.net/
Summary     : Tools for nucleotide sequence alignments in the SAM format
Description :
SAM (Sequence Alignment/Map) is a flexible generic format for storing
nucleotide sequence alignment.
SAM Tools provide various utilities for manipulating alignments in the
SAM format, including sorting, merging, indexing and generating
alignments in a per-position format.

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Update Information:

Updated to 0.1.18
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ChangeLog:

* Tue Sep  6 2011 Rasmus Ory Nielsen <ron at ron.dk> - 0.1.18-1
- Updated to 0.1.18
* Tue May 10 2011 Rasmus Ory Nielsen <ron at ron.dk> - 0.1.16-1
- Updated to 0.1.16
* Mon Apr 11 2011 Rasmus Ory Nielsen <ron at ron.dk> - 0.1.15-1
- Updated to 0.1.15
* Wed Mar 23 2011 Rasmus Ory Nielsen <ron at ron.dk> - 0.1.14-1
- Updated to 0.1.14
- Build shared library instead of static
* Wed Feb  9 2011 Fedora Release Engineering <rel-eng at lists.fedoraproject.org> - 0.1.12a-3
- Rebuilt for https://fedoraproject.org/wiki/Fedora_15_Mass_Rebuild
* Mon Dec  6 2010 Rasmus Ory Nielsen <ron at ron.dk> - 0.1.12a-2
- Fixed header files directory ownership
- Added missing header files
* Mon Dec  6 2010 Rasmus Ory Nielsen <ron at ron.dk> - 0.1.12a-1
- Updated to 0.1.12a
* Tue Nov 23 2010 Adam Huffman <bloch at verdurin.com> - 0.1.8-4
- cleanup man page handling
* Sun Oct 10 2010 Adam Huffman <bloch at verdurin.com> - 0.1.8-4
- fix attributes for devel subpackage
- fix library location
* Sun Sep 26 2010 Adam Huffman <bloch at verdurin.com> - 0.1.8-3
- put headers and library in standard locations
* Mon Sep  6 2010 Adam Huffman <bloch at verdurin.com> - 0.1.8-2
- merge Rasmus' latest changes (0.1.8 update)
- include bam.h and libbam.a for Bio-SamTools compilation
- move bam.h and libbam.a to single directory
- put bgzf.h, khash.h and faidx.h in the same place
- add -fPIC to CFLAGS to make Bio-SamTools happy
- add virtual Provide as per guidelines
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This update can be installed with the "yum" update program.  Use 
su -c 'yum update samtools' at the command line.
For more information, refer to "Managing Software with yum",
available at http://docs.fedoraproject.org/yum/.

All packages are signed with the Fedora Project GPG key.  More details on the
GPG keys used by the Fedora Project can be found at
https://fedoraproject.org/keys
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