Fedora 19 Update: R-GenomicFeatures-1.12.0-1.fc19

updates at fedoraproject.org updates at fedoraproject.org
Tue Apr 23 03:42:30 UTC 2013


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Fedora Update Notification
FEDORA-2013-5860
2013-04-17 16:03:47
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Name        : R-GenomicFeatures
Product     : Fedora 19
Version     : 1.12.0
Release     : 1.fc19
URL         : http://bioconductor.org/packages/2.9/bioc/html/GenomicFeatures.html
Summary     : Tools for making and manipulating transcript centric annotations
Description :
A set of tools and methods for making and manipulating transcript centric
annotations. With these tools the user can easily download the genomic
locations of the transcripts, exons and cds of a given organism, from either
the UCSC Genome Browser or a BioMart database (more sources will be supported
in the future). This information is then stored in a local database that
keeps track of the relationship between transcripts, exons, cds and genes.
Flexible methods are provided for extracting the desired features in a
convenient format.

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Update Information:

Update R to 3.0.0. This required a rebuild of all R modules and R dependent packages.

Because of the intrusive nature of this particular R update, it is not planned for any releases of Fedora older than Fedora 19.
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References:

  [ 1 ] Bug #948083 - R-2.15.2-3 has a bug in kmeans
        https://bugzilla.redhat.com/show_bug.cgi?id=948083
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This update can be installed with the "yum" update program.  Use 
su -c 'yum update R-GenomicFeatures' at the command line.
For more information, refer to "Managing Software with yum",
available at http://docs.fedoraproject.org/yum/.

All packages are signed with the Fedora Project GPG key.  More details on the
GPG keys used by the Fedora Project can be found at
https://fedoraproject.org/keys
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