Fedora 18 Update: R-qtl-1.29.2-1.fc18

updates at fedoraproject.org updates at fedoraproject.org
Tue Dec 31 02:04:00 UTC 2013


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Fedora Update Notification
FEDORA-2013-23872
2013-12-23 02:00:26
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Name        : R-qtl
Product     : Fedora 18
Version     : 1.29.2
Release     : 1.fc18
URL         : http://www.rqtl.org/
Summary     : Tools for analyzing QTL experiments
Description :
R-qtl is an extensible, interactive environment for mapping
quantitative trait loci (QTLs) in experimental crosses. Our goal is to
make complex QTL mapping methods widely accessible and allow users to
focus on modeling rather than computing.

A key component of computational methods for QTL mapping is the hidden
Markov model (HMM) technology for dealing with missing genotype
data. We have implemented the main HMM algorithms, with allowance for
the presence of genotyping errors, for backcrosses, intercrosses, and
phase-known four-way crosses.

The current version of R-qtl includes facilities for estimating
genetic maps, identifying genotyping errors, and performing single-QTL
genome scans and two-QTL, two-dimensional genome scans, by interval
mapping (with the EM algorithm), Haley-Knott regression, and multiple
imputation. All of this may be done in the presence of covariates
(such as sex, age or treatment). One may also fit higher-order QTL
models by multiple imputation and Haley-Knott regression.

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Update Information:

R-qtl 1.29-2

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ChangeLog:

* Sat Dec 21 2013 Mattias Ellert <mattias.ellert at fysast.uu.se> - 1.29.2-1
- Update to 1.29.2
- Add BR for blas-devel and lapack-devel
* Tue Oct 15 2013 Mattias Ellert <mattias.ellert at fysast.uu.se> - 1.28.19-1
- Update to 1.28.19
* Fri Aug  2 2013 Fedora Release Engineering <rel-eng at lists.fedoraproject.org> - 1.27.10-3
- Rebuilt for https://fedoraproject.org/wiki/Fedora_20_Mass_Rebuild
* Wed Apr 17 2013 Tom Callaway <spot at fedoraproject.org> - 1.27.10-2
- rebuild for R3
* Thu Apr 11 2013 Pierre-Yves Chibon <pingou at pingoured.fr> - 1.27.10-1
- Update to 1.27.10
* Thu Apr 11 2013 Tom Callaway <spot at fedoraproject.org> - 1.26.14-3
- rebuild for R3
* Wed Feb 13 2013 Fedora Release Engineering <rel-eng at lists.fedoraproject.org> - 1.26.14-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_19_Mass_Rebuild
* Tue Dec 11 2012 Mattias Ellert <mattias.ellert at fysast.uu.se> - 1.26.14-1
- New upstream release
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This update can be installed with the "yum" update program.  Use 
su -c 'yum update R-qtl' at the command line.
For more information, refer to "Managing Software with yum",
available at http://docs.fedoraproject.org/yum/.

All packages are signed with the Fedora Project GPG key.  More details on the
GPG keys used by the Fedora Project can be found at
https://fedoraproject.org/keys
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