[Bug 497622] Review Request: apbs - adaptive poisson boltzmann solver

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https://bugzilla.redhat.com/show_bug.cgi?id=497622





--- Comment #32 from Tim Fenn <fenn at stanford.edu>  2009-07-26 21:49:16 EDT ---
(In reply to comment #31)
> (In reply to comment #30)
> > (In reply to comment #26)
> > > apbs has support for:
> > >   --with-mpich=PATH       toplevel MPICH directory
> > >   --with-mpich2=PATH      toplevel MPICH2 directory
> > >   --with-lam=PATH         toplevel LAM-MPI directory
> > >   --with-openmpi          enable OpenMPI compilation
> > > so I suggest you add these to the package in the future.
> > > 
> > 
> > Will do.
> 
> Just no hurry - wait until the two drafts become guidelines :)
> 

Right!

> > This works, but the resulting examples take ~4hrs to run on my AMD opteron 275.
> > I can cut it down to a 1-2 of the examples...
> 
> Ugh. Do they give an error code if the result is not the wanted one..?
> 
> You could probably just drop the %check phase.
> 

There is no error code, it just prints out that the result was not within the
given error tolerance.

I just took out the %check.

> 
> Package does not build:
> RPM build errors:
>     File not found:
> /builddir/build/BUILDROOT/apbs-1.1.0-5.fc11.x86_64/usr/bin/ApbsClient.pyc
>     File not found:
> /builddir/build/BUILDROOT/apbs-1.1.0-5.fc11.x86_64/usr/bin/ApbsClient.pyo
> 
> This is due to RPM in Fedora 11 not byte compiling files in %{_bindir}. Instead
> of %exclude you could just delete the files after %install with rm -f which
> doesn't complain about possible non-existing files.  

I just removed the %exclude statement and built using F11 (since I won't be
packaging this for F10 anyway).

Spec URL: http://www.stanford.edu/~fenn/packs/apbs.spec
SRPM URL: http://www.stanford.edu/~fenn/packs/apbs-1.1.0-6.fc11.src.rpm

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