[Bug 600517] Review Request: R-coda - coda: Output analysis and diagnostics for MCMC

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https://bugzilla.redhat.com/show_bug.cgi?id=600517

--- Comment #6 from chris desjardins <cddesjardins at gmail.com> 2010-06-05 09:38:39 EDT ---
Thanks. For continuing to review this. 
re: The spelling error ... MCMC is spelled MCMC so that's fine

re: The file Thin.R in the R folder is an empty file

I don't have a Thin.R in R-coda.rpm, I do have a thin.html (or do you mean
line.R (because that has data too)).

[lontra at goddard ~]$ rpm -ql R-coda
/usr/share/R/library/coda
/usr/share/R/library/coda/COPYING
/usr/share/R/library/coda/DESCRIPTION
/usr/share/R/library/coda/INDEX
/usr/share/R/library/coda/Meta
/usr/share/R/library/coda/Meta/Rd.rds
/usr/share/R/library/coda/Meta/data.rds
/usr/share/R/library/coda/Meta/hsearch.rds
/usr/share/R/library/coda/Meta/links.rds
/usr/share/R/library/coda/Meta/nsInfo.rds
/usr/share/R/library/coda/Meta/package.rds
/usr/share/R/library/coda/NAMESPACE
/usr/share/R/library/coda/R
/usr/share/R/library/coda/R/coda
/usr/share/R/library/coda/R/coda.rdb
/usr/share/R/library/coda/R/coda.rdx
/usr/share/R/library/coda/data
/usr/share/R/library/coda/data/line.R
/usr/share/R/library/coda/help
/usr/share/R/library/coda/help/AnIndex
/usr/share/R/library/coda/help/aliases.rds
/usr/share/R/library/coda/help/coda.rdb
/usr/share/R/library/coda/help/coda.rdx
/usr/share/R/library/coda/help/paths.rds
/usr/share/R/library/coda/html
/usr/share/R/library/coda/html/00Index.html
/usr/share/R/library/coda/html/Cramer.html
/usr/share/R/library/coda/html/HPDinterval.html
/usr/share/R/library/coda/html/as.ts.mcmc.html
/usr/share/R/library/coda/html/autocorr.diag.html
/usr/share/R/library/coda/html/autocorr.html
/usr/share/R/library/coda/html/autocorr.plot.html
/usr/share/R/library/coda/html/batchSE.html
/usr/share/R/library/coda/html/bugs2jags.html
/usr/share/R/library/coda/html/coda.options.html
/usr/share/R/library/coda/html/codamenu.html
/usr/share/R/library/coda/html/crosscorr.html
/usr/share/R/library/coda/html/crosscorr.plot.html
/usr/share/R/library/coda/html/cumuplot.html
/usr/share/R/library/coda/html/densplot.html
/usr/share/R/library/coda/html/effectiveSize.html
/usr/share/R/library/coda/html/gelman.diag.html
/usr/share/R/library/coda/html/gelman.plot.html
/usr/share/R/library/coda/html/geweke.diag.html
/usr/share/R/library/coda/html/geweke.plot.html
/usr/share/R/library/coda/html/heidel.diag.html
/usr/share/R/library/coda/html/linepost.html
/usr/share/R/library/coda/html/mcmc.convert.html
/usr/share/R/library/coda/html/mcmc.html
/usr/share/R/library/coda/html/mcmc.list.html
/usr/share/R/library/coda/html/mcmc.subset.html
/usr/share/R/library/coda/html/mcmcUpgrade.html
/usr/share/R/library/coda/html/mcpar.html
/usr/share/R/library/coda/html/multi.menu.html
/usr/share/R/library/coda/html/nchain.html
/usr/share/R/library/coda/html/plot.mcmc.html
/usr/share/R/library/coda/html/raftery.diag.html
/usr/share/R/library/coda/html/read.and.check.html
/usr/share/R/library/coda/html/read.coda.html
/usr/share/R/library/coda/html/read.coda.interactive.html
/usr/share/R/library/coda/html/read.openbugs.html
/usr/share/R/library/coda/html/rejectionRate.html
/usr/share/R/library/coda/html/spectrum0.ar.html
/usr/share/R/library/coda/html/spectrum0.html
/usr/share/R/library/coda/html/summary.mcmc.html
/usr/share/R/library/coda/html/thin.html
/usr/share/R/library/coda/html/time.mcmc.html
/usr/share/R/library/coda/html/traceplot.html
/usr/share/R/library/coda/html/trellisplots.html
/usr/share/R/library/coda/html/varnames.html
/usr/share/R/library/coda/html/window.mcmc.html

Opening Firefox on thin.html shows a R help page.

re: URL is still not valid

I am stumped here. What should this look like? The URL field is the same in my
spec file as it is here https://fedoraproject.org/wiki/Packaging:R. Should it
be removed or should the Source0 field be updated to be more general? Can you
give me a hint.

Thanks!
Chris

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