[Bug 694998] New: Review Request: cufflinks - RNA-Seq transcript assembly, differential expression/regulation

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Summary: Review Request: cufflinks - RNA-Seq transcript assembly, differential expression/regulation

https://bugzilla.redhat.com/show_bug.cgi?id=694998

           Summary: Review Request: cufflinks - RNA-Seq transcript
                    assembly, differential expression/regulation
           Product: Fedora
           Version: rawhide
          Platform: All
        OS/Version: Linux
            Status: NEW
          Severity: medium
          Priority: medium
         Component: Package Review
        AssignedTo: nobody at fedoraproject.org
        ReportedBy: bloch at verdurin.com
         QAContact: extras-qa at fedoraproject.org
                CC: notting at redhat.com, fedora-package-review at redhat.com
   Estimated Hours: 0.0
    Classification: Fedora
      Story Points: ---


Spec URL: http://verdurin.fedorapeople.org/reviews/cufflinks/cufflinks.spec
SRPM URL:
http://verdurin.fedorapeople.org/reviews/cufflinks/cufflinks-0.9.3-1.fc15.src.rpm
Description: 
Cufflinks assembles transcripts, estimates their abundances, and tests
for differential expression and regulation in RNA-Seq samples. It
accepts aligned RNA-Seq reads and assembles the alignments into a
parsimonious set of transcripts. Cufflinks then estimates the relative
abundances of these transcripts based on how many reads support each
one.

Cufflinks is a collaborative effort between the Laboratory for
Mathematical and Computational Biology, led by Lior Pachter at UC
Berkeley, Steven Salzberg's group at the University of Maryland Center
for Bioinformatics and Computational Biology, and Barbara Wold's lab
at Caltech.

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