[Bug 708402] New: Review Request: tophat - A spliced read mapper for RNA-Seq

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Fri May 27 14:48:51 UTC 2011


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Summary: Review Request: tophat - A spliced read mapper for RNA-Seq

https://bugzilla.redhat.com/show_bug.cgi?id=708402

           Summary: Review Request: tophat - A spliced read mapper for
                    RNA-Seq
           Product: Fedora
           Version: rawhide
          Platform: All
        OS/Version: Linux
            Status: NEW
          Severity: medium
          Priority: medium
         Component: Package Review
        AssignedTo: nobody at fedoraproject.org
        ReportedBy: bloch at verdurin.com
         QAContact: extras-qa at fedoraproject.org
                CC: notting at redhat.com, fedora-package-review at redhat.com
   Estimated Hours: 0.0
    Classification: Fedora
      Story Points: ---


Spec URL: http://verdurin.fedorapeople.org/reviews/tophat/tophat.spec
SRPM URL:
http://verdurin.fedorapeople.org/reviews/tophat/tophat-1.2.0-2.fc16.src.rpm
Description: 
TopHat is a fast splice junction mapper for RNA-Seq reads. It aligns
RNA-Seq reads to mammalian-sized genomes using the ultra
high-throughput short read aligner Bowtie, and then analyzes the
mapping results to identify splice junctions between exons.

TopHat is a collaborative effort between the University of Maryland
Center for Bioinformatics and Computational Biology and the University
of California, Berkeley Departments of Mathematics and Molecular and
Cell Biology.

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