[Bug 753182] New: Review Request: R-biomaRt - R Interface to BioMart databases

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Fri Nov 11 14:41:59 UTC 2011


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Summary: Review Request: R-biomaRt - R Interface to BioMart databases

https://bugzilla.redhat.com/show_bug.cgi?id=753182

           Summary: Review Request: R-biomaRt - R Interface to BioMart
                    databases
           Product: Fedora
           Version: rawhide
          Platform: All
        OS/Version: Linux
            Status: NEW
          Severity: medium
          Priority: medium
         Component: Package Review
        AssignedTo: nobody at fedoraproject.org
        ReportedBy: tcallawa at redhat.com
         QAContact: extras-qa at fedoraproject.org
                CC: notting at redhat.com,
                    package-review at lists.fedoraproject.org
    Classification: Fedora
      Story Points: ---
              Type: ---


Spec URL: http://spot.fedorapeople.org/R-biomaRt.spec
SRPM URL: http://spot.fedorapeople.org/R-biomaRt-2.10.0-1.fc16.src.rpm
Description: 
In recent years a wealth of biological data has become available in public 
data repositories. Easy access to these valuable data resources and firm 
integration with data analysis is needed for comprehensive bioinformatics data 
analysis. biomaRt provides an interface to a growing collection of databases 
implementing the BioMart software suite (http://www.biomart.org). The package 
enables retrieval of large amounts of data in a uniform way without the need 
to know the underlying database schemas or write complex SQL queries. Examples 
of BioMart databases are Ensembl, COSMIC, Uniprot, HGNC, Gramene, Wormbase and 
dbSNP mapped to Ensembl. These major databases give biomaRt users direct 
access to a diverse set of data and enable a wide range of powerful online 
queries from gene annotation to database mining.

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