[Bug 753182] New: Review Request: R-biomaRt - R Interface to BioMart databases
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Fri Nov 11 14:41:59 UTC 2011
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Summary: Review Request: R-biomaRt - R Interface to BioMart databases
https://bugzilla.redhat.com/show_bug.cgi?id=753182
Summary: Review Request: R-biomaRt - R Interface to BioMart
databases
Product: Fedora
Version: rawhide
Platform: All
OS/Version: Linux
Status: NEW
Severity: medium
Priority: medium
Component: Package Review
AssignedTo: nobody at fedoraproject.org
ReportedBy: tcallawa at redhat.com
QAContact: extras-qa at fedoraproject.org
CC: notting at redhat.com,
package-review at lists.fedoraproject.org
Classification: Fedora
Story Points: ---
Type: ---
Spec URL: http://spot.fedorapeople.org/R-biomaRt.spec
SRPM URL: http://spot.fedorapeople.org/R-biomaRt-2.10.0-1.fc16.src.rpm
Description:
In recent years a wealth of biological data has become available in public
data repositories. Easy access to these valuable data resources and firm
integration with data analysis is needed for comprehensive bioinformatics data
analysis. biomaRt provides an interface to a growing collection of databases
implementing the BioMart software suite (http://www.biomart.org). The package
enables retrieval of large amounts of data in a uniform way without the need
to know the underlying database schemas or write complex SQL queries. Examples
of BioMart databases are Ensembl, COSMIC, Uniprot, HGNC, Gramene, Wormbase and
dbSNP mapped to Ensembl. These major databases give biomaRt users direct
access to a diverse set of data and enable a wide range of powerful online
queries from gene annotation to database mining.
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