[Bug 537138] Bioperl doesn't bootstrap on other platforms, circular dependencies
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Fri Nov 13 12:51:18 UTC 2009
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https://bugzilla.redhat.com/show_bug.cgi?id=537138
--- Comment #11 from Yaakov Nemoy <loupgaroublond at gmail.com> 2009-11-13 07:51:16 EDT ---
Follows is a list of the packages we had to rebuild to make this work. In
almost all cases we had to do a simple rebuild for epel. 'umc' means that we
applied our own patches. In this particular case, one of the tests was failing
and i need to attach an appropriate bug report. I googled the error and it
appears it might be a regression from a bug that was fixed in an earlier
version, but i'm not 100% what it is.
On that note, is there anything you fundamentally need todo to the spec file to
once and for all solve the bootstrap problem? If not, uncommenting and then
commenting code seems to work, and i feel this bug can be closed. Comments?
perl-bioperl noarch 1.6.1-1.el5 centos-5-genomics 6.2 M
libxml2 x86_64 2.7.6-1.el5 centos-5-genomics 854 k
libxml2-python x86_64 2.7.6-1.el5 centos-5-genomics 519 k
libxslt x86_64 1.1.26-1.el5 centos-5-genomics 546 k
perl-Ace noarch 1.92-2.el5 centos-5-genomics 310 k
perl-Bio-ASN1-EntrezGene noarch 1.091-7.el5 centos-5-genomics 41 k
perl-Convert-Binary-C x86_64 0.74-1.el5 centos-5-genomics 294 k
perl-Data-Stag noarch 0.11-2.el5 centos-5-genomics 185 k
perl-Math-Derivative noarch 0.01-3.el5 centos-5-genomics 7.3 k
perl-Math-Spline noarch 0.01-2.el5 centos-5-genomics 8.4 k
perl-PostScript noarch 0.06-2.el5 centos-5-genomics 31 k
perl-SVG noarch 2.44-1.el5 centos-5-genomics 82 k
perl-SVG-Graph noarch 0.02-1.el5 centos-5-genomics 96 k
perl-Set-Scalar noarch 1.23-2.el5 centos-5-genomics 38 k
perl-XML-DOM-XPath noarch 0.14-1.el5 centos-5-genomics 11 k
perl-XML-LibXSLT x86_64 1.68-3.el5 centos-5-genomics 54 k
perl-XML-SAX noarch 0.96-2.el5 centos-5-genomics 78 k
perl-XML-XPathEngine noarch 0.11-1.el5 centos-5-genomics 40 k
perl-umc-XML-LibXML x86_64 1:1.69-3.el5 centos-5-genomics 375 k
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