rpms/openmpi/devel mpi_alternatives.in, NONE, 1.1 openmpi.module.in, NONE, 1.1 openmpi.pc.in, NONE, 1.1 openmpi.spec, NONE, 1.1 relpath.sh, NONE, 1.1 .cvsignore, 1.1, 1.2 sources, 1.1, 1.2
Jason Vas Dias (jvdias)
fedora-extras-commits at redhat.com
Thu Feb 23 17:59:37 UTC 2006
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Author: jvdias
Update of /cvs/extras/rpms/openmpi/devel
In directory cvs-int.fedora.redhat.com:/tmp/cvs-serv29654/devel
Modified Files:
.cvsignore sources
Added Files:
mpi_alternatives.in openmpi.module.in openmpi.pc.in
openmpi.spec relpath.sh
Log Message:
auto-import openmpi-1.0.1-1.fe5 on branch devel from openmpi-1.0.1-1.fe5.src.rpm
--- NEW FILE mpi_alternatives.in ---
#!/bin/bash
#
# Script to set up alternatives(8) for MPI files which clash between OpenMPI and LAM
#
# Usage:
# mpi_alternatives < install | display | remove | set > [ lam | openmpi ]
#
# Based on openmpi.spec file that uses alternatives by
# Orion Poplawski<orion at cora.nwra.com>
#
# Copyright(C) Jason Vas Dias <jvdias at redhat.com>, Red Hat, Inc. 2006
# Freely distributable under the terms of the GNU Public License(GPL)
# as published at: http://www.gnu.org/licenses/gpl.html
#
bindir=@BINDIR@; # RPM _bindir macro during openmpi build
sysconfdir=@SYSCONFDIR@; # RPM _sysconfdir macro during openmpi build
datadir=@DATADIR@; # RPM _datadir macro during openmpi build
ompfx=@OMBINPFX@; # RPM OpenMPI OMbinpfx macro during openmpi build
lampfx=@LAMBINPFX@; # RPM lam LAMbinpfx macro during openmpi build
if [ `whoami` != 'root' ]; then
echo "You must be root to set the MPI alternatives.";
exit 1;
fi;
if [ ! -x /usr/sbin/alternatives ]; then
echo "/usr/sbin/alternatives not installed. Install the chkconfig package.";
exit 1;
fi;
case $1 in
install)
# Install alternative for MPI :
/usr/sbin/alternatives --display mpi;
if [ $? -eq 0 ]; then
echo "cannot install alternative for ${b##*/}: already exists.";
exit 0;
fi;
for b in mpirun mpiexec mpicc mpic++ mpif77; do
if [ ! -e ${bindir}/${lampfx}$b ]; then
echo "Error: cannot install mpi alternatives: ${bindir}/${lampfx}$b does not exist.";
echo " check that the lam RPM is installed.";
exit 1;
fi;
if [ ! -e ${bindir}/${ompfx}${b} ]; then
echo "Error: cannot install mpi alternatives: ${bindir}/${ompfx}$b does not exist.";
echo " check that the openmpi RPM is installed.";
exit 1;
fi;
if [ -e ${bindir}/$b ]; then
if [ ! -L ${bindir}/$b ]; then
echo "Error: cannot install mpi alternatives: ${bindir}/$b exists and is not a link.";
echo " check that the lam RPM version >= 7.1.1-11 is installed.";
exit 1;
fi;
rm -f ${bindir}/$b; # alternatives will create the link
fi;
done;
if [ ! -e ${datadir}/openmpi/ld.conf ]; then
echo "Error: cannot install mpi alternatives: ${datadir}/openmpi/ld.conf does not exist.";
echo " check that the openmpi RPM is installed.";
fi;
if [ ! -e ${datadir}/lam/ld.conf ]; then
echo "Error: cannot install mpi alternatives: ${datadir}/lam/ld.conf does not exist.";
echo " check that the lam RPM version >= 7.1.1-11 is installed.";
fi;
if [ -e ${sysconfdir}/ld.so.conf.d/mpi.conf ]; then
if [ ! -L ${sysconfdir}/ld.so.conf.d/mpi.conf ]; then
echo "Error: cannot install mpi alternatives: ${sysconfdir}/ld.so.conf.d/mpi.conf exists and is not a link.";
exit 1;
fi;
rm -f ${sysconfdir}/ld.so.conf.d/mpi.conf;
fi;
/usr/sbin/alternatives \
--install ${sysconfdir}/ld.so.conf.d/mpi.conf mpi ${datadir}/openmpi/ld.conf 50 \
--slave ${bindir}/mpirun mpirun ${bindir}/${ompfx}mpirun \
--slave ${bindir}/mpiexec mpiexec ${bindir}/${ompfx}mpiexec \
--slave ${bindir}/mpicc mpicc ${bindir}/${ompfx}mpicc \
--slave ${bindir}/mpic++ mpic++ ${bindir}/${ompfx}mpic++ \
--slave ${bindir}/mpiCC mpiCC ${bindir}/${ompfx}mpic++ \
--slave ${bindir}/mpif77 mpif77 ${bindir}/${ompfx}mpif77;
retval=$?;
if [ $retval -ne 0 ]; then
echo "Installation of OpenMPI MPI alternative failed.";
exit $retval;
fi;
/usr/sbin/alternatives \
--install ${sysconfdir}/ld.so.conf.d/mpi.conf mpi ${datadir}/lam/ld.conf 50 \
--slave ${bindir}/mpirun mpirun ${bindir}/${lampfx}mpirun \
--slave ${bindir}/mpiexec mpiexec ${bindir}/${lampfx}mpiexec \
--slave ${bindir}/mpicc mpicc ${bindir}/${lampfx}mpicc \
--slave ${bindir}/mpic++ mpic++ ${bindir}/${lampfx}mpic++ \
--slave ${bindir}/mpiCC mpiCC ${bindir}/${lampfx}mpic++ \
--slave ${bindir}/mpif77 mpif77 ${bindir}/${lampfx}mpif77;
retval=$?;
if [ $retval -ne 0 ]; then
echo "Installation of LAM MPI alternative failed.";
exit $retval;
fi;
prefMPI=lam
if [ -n "$2" ] ; then
if [ $2 =~ '[Oo].*[Mm]' ]; then
prefMPI=openmpi;
fi;
fi;
/usr/sbin/alternatives --set mpi ${datadir}/$prefMPI/ld.conf;
retval=$?;
if [ $retval -ne 0 ]; then
echo "Selection of default LAM alternative failed.";
exit $retval;
fi;
ldconfig;
exit $retval;
;;
display)
/usr/sbin/alternatives --display mpi;
if [ $? -ne 0 ]; then
echo 'No alternatives set up for mpi - run "mpi_alternatives install".';
exit 1;
fi;
exit 0;
;;
remove)
/usr/sbin/alternatives --remove mpi ${datadir}/lam/ld.conf
retval=$?;
if [ $retval -ne 0 ]; then
echo "Removal of mpi alternative ${datadir}/lam/ld.conf failed.";
exit $retval;
fi;
/usr/sbin/alternatives --remove mpi ${datadir}/openmpi/ld.conf
retval=$?;
if [ $retval -ne 0 ]; then
echo "Removal of mpi alternative ${datadir}/openmpi/ld.conf failed.";
exit $retval;
fi;
# set mpi.conf back to default (LAM):
if [ ! -e ${sysconfdir}/ld.so.conf.d/mpi.conf ]; then
if [ -e ${datadir}/lam/ld.conf ]; then
ln -s ${datadir}/lam/ld.conf ${sysconfdir}/ld.so.conf.d/mpi.conf;
elif [ -e ${datadir}/openmpi/ld.conf ]; then
ln -s ${datadir}/openmpi/ld.conf ${sysconfdir}/ld.so.conf.d/mpi.conf;
else
echo "Warning: no ${sysconfdir}/ld.so.conf.d/mpi.conf exists!";
fi;
fi;
ldconfig;
exit $?;
;;
set)
prefMPI=''
case "$2" in
*[Ll][aA][mM]*)
prefMPI=lam
;;
*[Oo]*[Mm]*)
prefMPI=openmpi
;;
*)
echo 'Usage: mpi_alternatives set < lam | openmpi >';
;;
esac;
/usr/sbin/alternatives --set mpi ${datadir}/$prefMPI/ld.conf
retval=$?;
if [ $retval -ne 0 ]; then
echo "Setting MPI alternative to ${datadir}/$prefMPI/ld.conf failed.";
exit $retval;
fi;
ldconfig;
exit $?;
;;
*)
echo 'Usage: mpi_alternatives < install | display | remove | set>';
echo ' Sets up alternatives for MPI (Message Passing Interface) between LAM and OpenMPI implementations.'
exit 1;
;;
esac;
--- NEW FILE openmpi.module.in ---
#%Module 1.0
#
# OpenMPI module for use with 'environment-modules' package:
#
prepend-path PATH @DATADIR@/@NAME@/bin
prepend-path LD_LIBRARY_PATH @DATADIR@/@NAME@/lib
prepend-path MANPATH @DATADIR@/@NAME@/man
setenv CFLAGS -I at DATADIR@/@NAME@/include
setenv LDFLAGS -L at DATADIR@/@NAME@/lib
--- NEW FILE openmpi.pc.in ---
# pkg-config file for openmpi
Name: openmpi
Description: Open Message Passing Interface headers and libraries
URL: http://www.open-mpi.org/
Version: @VERSION@
Libs: -L at LIBDIR@ -lmpi
Cflags: -I at INCLUDEDIR@
--- NEW FILE openmpi.spec ---
%{?!dist: %define dist .fe5}
Name: openmpi
Version: 1.0.1
Release: 1%{dist}
Summary: Open Message Passing Interface
Group: Development/Libraries
License: BSD
URL: http://www.open-mpi.org/
Source0: http://www.open-mpi.org/software/ompi/v1.0/downloads/%{name}-%{version}.tar.bz2
Source1: relpath.sh
Source2: openmpi.pc.in
Source3: mpi_alternatives.in
Source4: openmpi.module.in
BuildRoot: %{_tmppath}/%{name}-%{version}-%{release}-root-%(%{__id_u} -n)
BuildRequires: gcc-gfortran
Requires(post): /sbin/ldconfig
%package devel
Summary: Development files for openmpi
Group: Development/Libraries
Requires: %{name} = %{version}-%{release}
%description
Open MPI provides a programming and runtime environment for
parallel and/or distributed networked multi-computer systems .
MPI stands for the Message Passing Interface. Written by the MPI Forum,
MPI is a standardized API typically used for parallel and/or distributed
computing - see http://www.mpi-forum.org/ .
Open MPI is an open source, freely available implementation of both the
MPI-1 and MPI-2 standards, combining technologies and resources from
several other projects (FT-MPI, LA-MPI, LAM/MPI, and PACX-MPI) in
order to build the best MPI library available. A completely new MPI-2
compliant implementation, Open MPI offers advantages for system and
software vendors, application developers, and computer science
researchers. For more information, see http://www.open-mpi.org/ .
%description devel
Contains development headers and libraries for openmpi
%prep
%setup -q
%build
%ifarch x86_64
XCFLAGS="$RPM_OPT_FLAGS -fPIC"
XCXXFLAGS="$RPM_OPT_FLAGS -fPIC"
XFFLAGS="$RPM_OPT_FLAGS -fPIC"
%endif
%configure \
--includedir=%{_includedir}/%{name} \
--libdir=%{_libdir}/%{name} \
--datadir=%{_datadir}/%{name}/help \
LDFLAGS='-Wl,-z,noexecstack' \
CFLAGS="$CFLAGS $XCFLAGS" \
CXXFLAGS="$CFLAGS $XCFLAGS" \
FFLAGS="$FFLAGS $XFLAGS";
# ${datadir}/openmpi will be used ONLY for the english help*.txt files
make %{?_smp_mflags}
%{?!OMbinpfx: %define OMbinpfx om-} # prefix for OpenMPI binaries that clash with LAM
%{?!LAMbinpfx: %define LAMbinpfx lam-} # prefix for LAM binaries that clash with OpenMPI
%install
rm -rf ${RPM_BUILD_ROOT}
make install DESTDIR=$RPM_BUILD_ROOT
#
# Resolve LAM clashes and create %{_datadir}/openmpi/{bin,lib,include} :
. %SOURCE1
# ^- provides "relpath" function
rpath=`relpath ${RPM_BUILD_ROOT}/%{_bindir} ${RPM_BUILD_ROOT}/%{_datadir}/%{name}/bin`;
mkdir -p ${RPM_BUILD_ROOT}/%{_datadir}/%{name}/bin;
mkdir -p ${RPM_BUILD_ROOT}/%{_datadir}/%{name}/man;
ln -s `relpath ${RPM_BUILD_ROOT}/%{_libdir}/%{name} ${RPM_BUILD_ROOT}/%{_datadir}/%{name}` ${RPM_BUILD_ROOT}/%{_datadir}/%{name}/lib;
ln -s `relpath ${RPM_BUILD_ROOT}/%{_includedir}/%{name} ${RPM_BUILD_ROOT}/%{_datadir}/%{name}` ${RPM_BUILD_ROOT}/%{_datadir}/%{name}/include;
# Links: (mpiCC,mpicxx)->mpicc, (mpiexec,mpirun)->orterun
# Clashes with LAM: mpic++ mpicc mpif77 mpif90 mpiexec mpirun
rm -f ${RPM_BUILD_ROOT}/%{_bindir}/{mpiCC,mpicxx,mpiexec,mpirun}
(cd ${RPM_BUILD_ROOT}/%{_bindir}; ls) | egrep -v '^(mpic\+\+|mpicc|mpif77|mpif90)$' |
while read b; do
ln -s ${rpath}/${b} ${RPM_BUILD_ROOT}/%{_datadir}/%{name}/bin/${b};
done;
for b in mpic++ mpicc mpif77 mpif90; do
mv ${RPM_BUILD_ROOT}/%{_bindir}/$b ${RPM_BUILD_ROOT}/%{_bindir}/%{OMbinpfx}$b;
ln -s ${rpath}/%{OMbinpfx}$b ${RPM_BUILD_ROOT}/%{_datadir}/%{name}/bin/$b;
done
ln -s ./%{OMbinpfx}mpif90 ${RPM_BUILD_ROOT}/%{_bindir}/mpif90
ln -s ${rpath}/%{OMbinpfx}mpic++ ${RPM_BUILD_ROOT}/%{_datadir}/%{name}/bin/mpiCC
ln -s ./%{OMbinpfx}mpic++ ${RPM_BUILD_ROOT}/%{_bindir}/%{OMbinpfx}mpiCC
ln -s ${rpath}/%{OMbinpfx}mpic++ ${RPM_BUILD_ROOT}/%{_datadir}/%{name}/bin/mpicxx
ln -s ./%{OMbinpfx}mpic++ ${RPM_BUILD_ROOT}/%{_bindir}/%{OMbinpfx}mpicxx
ln -s ${rpath}/orterun ${RPM_BUILD_ROOT}/%{_datadir}/%{name}/bin/mpirun
ln -s ./orterun ${RPM_BUILD_ROOT}/%{_bindir}/%{OMbinpfx}mpirun
ln -s ${rpath}/orterun ${RPM_BUILD_ROOT}/%{_datadir}/%{name}/bin/mpiexec
ln -s ./orterun ${RPM_BUILD_ROOT}/%{_bindir}/%{OMbinpfx}mpiexec
mkdir -p ${RPM_BUILD_ROOT}/%{_sysconfdir}/ld.so.conf.d
# Create ld.so config file for selection with mpi_alternatives:
echo %{_libdir}/%{name} > ${RPM_BUILD_ROOT}/%{_datadir}/%{name}/ld.conf
# Create ghost mpi.conf ld.so config file:
touch ${RPM_BUILD_ROOT}/%{_sysconfdir}/ld.so.conf.d/mpi.conf
# We don't like .la files
find ${RPM_BUILD_ROOT}%{_libdir} -name \*.la | xargs rm
# Make the pkgconfig files
mkdir -p ${RPM_BUILD_ROOT}%{_libdir}/pkgconfig;
sed 's#@VERSION@#'%{version}'#;s#@LIBDIR@#'%{_libdir}/%{name}'#;s#@INCLUDEDIR@#'%{_includedir}/%{name}'#' < %SOURCE2 > ${RPM_BUILD_ROOT}/%{_libdir}/pkgconfig/%{name}.pc;
# Make the alternatives utility script:
mkdir -p ${RPM_BUILD_ROOT}/%{_sbindir}
sed 's#@BINDIR@#'%{_bindir}'#;s#@OMBINPFX@#'%{OMbinpfx}'#;s#@LAMBINPFX@#'%{LAMbinpfx}'#;s#@DATADIR@#'%{_datadir}'#;s#@SYSCONFDIR@#'%{_sysconfdir}'#' < %SOURCE3 > ${RPM_BUILD_ROOT}/%{_sbindir}/mpi_alternatives;
chmod +x ${RPM_BUILD_ROOT}/%{_sbindir}/mpi_alternatives;
sed 's#@DATADIR@#'%{_datadir}/%{name}'#;s#@NAME@#'%{name}'#' < %SOURCE4 > ${RPM_BUILD_ROOT}/%{_datadir}/%{name}/%{name}.module
:;
%clean
rm -rf ${RPM_BUILD_ROOT}
%post
if [ "$1" -ge 1 ]; then
if [ ! -e %{_sysconfdir}/ld.so.conf.d/mpi.conf ]; then
# handle the case where openmpi is installed without lam:
ln -s %{_datadir}/%{name}/ld.conf %{_sysconfdir}/ld.so.conf.d/mpi.conf;
fi;
fi;
/sbin/ldconfig
%preun
%postun -p /sbin/ldconfig
%post devel -p /sbin/ldconfig
%preun devel
%postun devel -p /sbin/ldconfig
%files
%defattr(-,root,root,-)
%doc LICENSE README
%ghost %{_sysconfdir}/ld.so.conf.d/mpi.conf
%config %{_sysconfdir}/openmpi-*
%{_bindir}/orte*
%{_bindir}/*run
%{_bindir}/*exec
%{_bindir}/*info
%{_sbindir}/mpi_alternatives
%dir %{_libdir}/%{name}
%dir %{_libdir}/%{name}/%{name}
%{_libdir}/%{name}/*.so.*
%{_libdir}/%{name}/%{name}/*.so
%{_libdir}/%{name}/*.mod
%{_datadir}/%{name}/bin
%{_datadir}/%{name}/lib
%{_datadir}/%{name}/man
%{_datadir}/%{name}/help
%{_datadir}/%{name}/%{name}.module
%{_datadir}/%{name}/ld.conf
%files devel
%defattr(-,root,root,-)
%{_bindir}/*
%exclude %{_bindir}/orte*
%exclude %{_bindir}/*run
%exclude %{_bindir}/*exec
%exclude %{_bindir}/*info
%{_includedir}/*
%dir %{_libdir}/%{name}
%{_libdir}/%{name}/*.so
%{_libdir}/%{name}/*.a
%{_libdir}/pkgconfig/%{name}.pc
%{_datadir}/%{name}/include
%changelog
* Wed Feb 15 2006 Jason Vas Dias <jvdias at redhat.com> - 1.0.1-1
- Import into Fedora Core
- Resolve LAM clashes
* Wed Jan 25 2006 Orion Poplawski <orion at cora.nwra.com> - 1.0.1-2
- Use configure options to install includes and libraries
- Add ld.so.conf.d file to find libraries
- Add -fPIC for x86_64
* Tue Jan 24 2006 Orion Poplawski <orion at cora.nwra.com> - 1.0.1-1
- 1.0.1
- Use alternatives
* Sat Nov 19 2005 Ed Hill <ed at eh3.com> - 1.0-2
- fix lam conflicts
* Fri Nov 18 2005 Ed Hill <ed at eh3.com> - 1.0-1
- initial specfile created
--- NEW FILE relpath.sh ---
#!/bin/bash
#
# Function to convert absolute path $2 to a relative path to $1
#
# There should be some builtin / utility which does this,
# but I can't think of one at the moment...
#
# Copyright(C) Jason Vas Dias <jvdias at redhat.com>, Red Hat, Inc. 2006
# Freely distributable under the terms of the GNU Public License(GPL)
#
function relpath()
{
IFS=/;
a=($1);
b=($2);
unset IFS;
a=(${a[@]});
b=(${b[@]});
p='';
for p in ${a[@]}; do
[ ${b[0]} != $p ] && break;
b[0]='';
b=(${b[@]});
a[0]='';
a=(${a[@]});
done
r='';
for p in ${b[@]}; do
r=../${r};
done
r=${r%/};
for p in ${a[@]}; do
r=$r/$p;
done
echo $r;
}
Index: .cvsignore
===================================================================
RCS file: /cvs/extras/rpms/openmpi/devel/.cvsignore,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- .cvsignore 23 Feb 2006 17:58:51 -0000 1.1
+++ .cvsignore 23 Feb 2006 17:59:37 -0000 1.2
@@ -0,0 +1 @@
+openmpi-1.0.1.tar.bz2
Index: sources
===================================================================
RCS file: /cvs/extras/rpms/openmpi/devel/sources,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- sources 23 Feb 2006 17:58:51 -0000 1.1
+++ sources 23 Feb 2006 17:59:37 -0000 1.2
@@ -0,0 +1 @@
+8abccca5cdddc81a6d9d9e22b3bb6db9 openmpi-1.0.1.tar.bz2
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