rpms/R-IRanges/devel R-IRanges.spec, NONE, 1.1 import.log, NONE, 1.1 .cvsignore, 1.1, 1.2 sources, 1.1, 1.2
Pierre-YvesChibon
pingou at fedoraproject.org
Mon Apr 6 08:14:58 UTC 2009
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Author: pingou
Update of /cvs/pkgs/rpms/R-IRanges/devel
In directory cvs1.fedora.phx.redhat.com:/tmp/cvs-serv27726/devel
Modified Files:
.cvsignore sources
Added Files:
R-IRanges.spec import.log
Log Message:
Original import for devel
--- NEW FILE R-IRanges.spec ---
%global BioC 2.4
%global packname IRanges
Name: R-%{packname}
Version: 1.1.55
Release: 1%{?dist}
Summary: Low-level containers for storing sets of integer ranges
Group: Applications/Engineering
License: Artistic 2.0 and Copyright only
# See https://www.redhat.com/archives/fedora-r-devel-list/2009-April/msg00001.html
URL: http://bioconductor.org/packages/%{BioC}/bioc/html/IRanges.html
Source0: http://bioconductor.org/packages/%{BioC}/bioc/src/contrib/%{packname}_%{version}.tar.gz
BuildRoot: %{_tmppath}/%{name}-%{version}-%{release}-root-%(%{__id_u} -n)
Requires: R >= 2.8.0 R-methods R-stats R-RUnit R-Matrix
Requires(post): R
Requires(postun): R
BuildRequires: R-devel tetex-latex R >= 2.8.0 R-methods R-stats R-RUnit R-Matrix
%description
The IRanges class and its extensions are low-level containers
for storing sets of integer ranges. A typical use of these containers
in biology is for representing a set of chromosome regions.
More specific extensions of the IRanges class will typically
allow the storage of additional information attached to each
chromosome region as well as a hierarchical relationship between
these regions.
%package devel
Summary: Development files for %{name}
Group: Development/Libraries
Requires: %{name} = %{version}-%{release}
%description devel
The %{name}-devel package contains libraries and header files for
developing applications that use %{name}.
%prep
%setup -q -c -n %{packname}
%build
%install
rm -rf %{buildroot}
# x86/x86_64 -> Architecture dependent package
mkdir -p %{buildroot}%{_libdir}/R/library
R CMD INSTALL %{packname} -l %{buildroot}%{_libdir}/R/library
# Clean up in advance of check
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -rf %{buildroot}%{_libdir}/R/library/R.css
%check
%{_bindir}/R CMD check %{packname}
%clean
rm -rf %{buildroot}
%post
%{_R_make_search_index}
%postun
%{_R_make_search_index}
%files
%defattr(-, root, root, -)
%dir %{_libdir}/R/library/%{packname}/
%doc %{_libdir}/R/library/%{packname}/latex
%doc %{_libdir}/R/library/%{packname}/html
%doc %{_libdir}/R/library/%{packname}/DESCRIPTION
%doc %{_libdir}/R/library/%{packname}/man
%{_libdir}/R/library/%{packname}/CONTENTS
%{_libdir}/R/library/%{packname}/INDEX
%{_libdir}/R/library/%{packname}/NAMESPACE
%{_libdir}/R/library/%{packname}/extdata
%{_libdir}/R/library/%{packname}/Meta
%{_libdir}/R/library/%{packname}/help
%{_libdir}/R/library/%{packname}/R
%{_libdir}/R/library/%{packname}/R-ex
%{_libdir}/R/library/%{packname}/libs
%files devel
%defattr(-,root,root,-)
%{_libdir}/R/library/%{packname}/include
%changelog
* Wed Apr 01 2009 pingou <pingou at pingoured.fr> 1.1.55-1
- New release from bioconductor 2.4 which includes the change in
the description file for the license used
- Update the license to its correct format
* Sun Mar 22 2009 pingou <pingou -AT- pingoured.fr> 1.0.14-3
- The main package owns the directory
- Remove pkgconfig as R for the devel package
- Define becomes global
* Sat Mar 21 2009 pingou <pingou -AT- pingoured.fr> 1.0.14-2
- Add R-Matrix as R and BR
* Fri Mar 13 2009 pingou <pingou -AT- pingoured.fr> 1.0.14-1
- Update to 1.0.14
* Wed Feb 18 2009 pingou <pingou -AT- pingoured.fr> 1.0.11-1
- initial package for Fedora
--- NEW FILE import.log ---
R-IRanges-1_1_55-1_fc10:HEAD:R-IRanges-1.1.55-1.fc10.src.rpm:1239005638
Index: .cvsignore
===================================================================
RCS file: /cvs/pkgs/rpms/R-IRanges/devel/.cvsignore,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- .cvsignore 3 Apr 2009 20:33:41 -0000 1.1
+++ .cvsignore 6 Apr 2009 08:14:26 -0000 1.2
@@ -0,0 +1 @@
+IRanges_1.1.55.tar.gz
Index: sources
===================================================================
RCS file: /cvs/pkgs/rpms/R-IRanges/devel/sources,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -r1.1 -r1.2
--- sources 3 Apr 2009 20:33:41 -0000 1.1
+++ sources 6 Apr 2009 08:14:26 -0000 1.2
@@ -0,0 +1 @@
+5f61e96f68c755fc1a1d1333560a7e38 IRanges_1.1.55.tar.gz
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