rpms/R-affy/F-10 R-affy.spec, NONE, 1.1 import.log, NONE, 1.1 .cvsignore, 1.1, 1.2 sources, 1.1, 1.2
pingou
pingou at fedoraproject.org
Sun Aug 30 20:13:06 UTC 2009
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Author: pingou
Update of /cvs/pkgs/rpms/R-affy/F-10
In directory cvs1.fedora.phx.redhat.com:/tmp/cvs-serv31603/F-10
Modified Files:
.cvsignore sources
Added Files:
R-affy.spec import.log
Log Message:
Original import
--- NEW FILE R-affy.spec ---
%global packname affy
%global bioc 2.4
Name: R-%{packname}
Version: 1.22.1
Release: 3%{?dist}
Summary: Methods for Affymetrix Oligonucleotide Arrays
Group: Applications/Engineering
License: LGPLv2+
URL: http://bioconductor.org/packages/%{bioc}/bioc/html/%{packname}.html
Source0: http://bioconductor.org/packages/%{bioc}/bioc/src/contrib/%{packname}_%{version}.tar.gz
BuildRoot: %{_tmppath}/%{name}-%{version}-%{release}-root-%(%{__id_u} -n)
Requires: R >= 2.8.0 R-Biobase R-tkWidgets R-preprocessCore R-affyio
Requires(post): R
Requires(postun): R
BuildRequires: R-devel tex(latex) R-Biobase R-tkWidgets R-preprocessCore-devel R-affyio
%description
The package contains functions for exploratory oligonucleotide array
analysis.
The dependancy to tkWidgets only concerns few convenience
functions. 'affy' is fully functional without it.
%prep
%setup -q -c -n %{packname}
%build
%install
rm -rf %{buildroot}
# x86/x86_64 -> Architecture dependent package
mkdir -p %{buildroot}%{_libdir}/R/library
R CMD INSTALL %{packname} -l %{buildroot}%{_libdir}/R/library
# Clean up in advance of check
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -rf %{buildroot}%{_libdir}/R/library/R.css
%check
# Circular dependency with affydata
#%{_bindir}/R CMD check %{packname}
%clean
rm -rf %{buildroot}
%post
%{_R_make_search_index}
%postun
%{_R_make_search_index}
%files
%defattr(-, root, root, -)
#i386 arch
%dir %{_libdir}/R/library/%{packname}
%doc %{_libdir}/R/library/%{packname}/latex
%doc %{_libdir}/R/library/%{packname}/doc
%doc %{_libdir}/R/library/%{packname}/html
%doc %{_libdir}/R/library/%{packname}/DESCRIPTION
%doc %{_libdir}/R/library/%{packname}/man
%doc %{_libdir}/R/library/%{packname}/NEWS
%doc %{_libdir}/R/library/%{packname}/CITATION
%{_libdir}/R/library/%{packname}/CONTENTS
%{_libdir}/R/library/%{packname}/INDEX
%{_libdir}/R/library/%{packname}/NAMESPACE
%{_libdir}/R/library/%{packname}/Meta
%{_libdir}/R/library/%{packname}/R
%{_libdir}/R/library/%{packname}/R-ex
%{_libdir}/R/library/%{packname}/help
%{_libdir}/R/library/%{packname}/data
%{_libdir}/R/library/%{packname}/libs
%{_libdir}/R/library/%{packname}/demo
%{_libdir}/R/library/%{packname}/tests
%changelog
* Sun Aug 31 2009 pingou <pingou at pingoured.fr> 1.22.1-3
- Change BR from tetex-latex to tex(latex) to reflect new guidelines change
- Correct typo in the description
* Wed Aug 19 2009 pingou <pingou at pingoured.fr> 1.22.1-2
- Add R-preprocessCore-devel as BR (oops)
* Wed Aug 19 2009 pingou <pingou at pingoured.fr> 1.22.1-1
- Update to 1.22.1 which correct license issue
* Sat Aug 01 2009 pingou <pingou at pingoured.fr> 1.22.0-1
- initial package for Fedora
--- NEW FILE import.log ---
R-affy-1_22_1-3_fc11:F-10:R-affy-1.22.1-3.fc11.src.rpm:1251663114
Index: .cvsignore
===================================================================
RCS file: /cvs/pkgs/rpms/R-affy/F-10/.cvsignore,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -p -r1.1 -r1.2
--- .cvsignore 28 Aug 2009 15:55:06 -0000 1.1
+++ .cvsignore 30 Aug 2009 20:13:06 -0000 1.2
@@ -0,0 +1 @@
+affy_1.22.1.tar.gz
Index: sources
===================================================================
RCS file: /cvs/pkgs/rpms/R-affy/F-10/sources,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -p -r1.1 -r1.2
--- sources 28 Aug 2009 15:55:06 -0000 1.1
+++ sources 30 Aug 2009 20:13:06 -0000 1.2
@@ -0,0 +1 @@
+5e71066d756195cdfa250548b242f9af affy_1.22.1.tar.gz
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