rpms/samtools/devel .cvsignore, 1.2, 1.3 import.log, 1.1, 1.2 samtools.spec, 1.2, 1.3 sources, 1.2, 1.3 samtools-0.1.5c-compilefix.patch, 1.1, NONE
ron
ron at fedoraproject.org
Mon Nov 30 08:21:21 UTC 2009
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Author: ron
Update of /cvs/pkgs/rpms/samtools/devel
In directory cvs1.fedora.phx.redhat.com:/tmp/cvs-serv12531/devel
Modified Files:
.cvsignore import.log samtools.spec sources
Removed Files:
samtools-0.1.5c-compilefix.patch
Log Message:
Updated to 0.1.7a
Index: .cvsignore
===================================================================
RCS file: /cvs/pkgs/rpms/samtools/devel/.cvsignore,v
retrieving revision 1.2
retrieving revision 1.3
diff -u -p -r1.2 -r1.3
--- .cvsignore 12 Jul 2009 19:10:51 -0000 1.2
+++ .cvsignore 30 Nov 2009 08:21:20 -0000 1.3
@@ -1 +1 @@
-samtools-0.1.5c.tar.bz2
+samtools-0.1.7a.tar.bz2
Index: import.log
===================================================================
RCS file: /cvs/pkgs/rpms/samtools/devel/import.log,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -p -r1.1 -r1.2
--- import.log 12 Jul 2009 19:10:51 -0000 1.1
+++ import.log 30 Nov 2009 08:21:21 -0000 1.2
@@ -1 +1,2 @@
samtools-0_1_5c-3_fc10:HEAD:samtools-0.1.5c-3.fc10.src.rpm:1247425812
+samtools-0_1_7a-1_fc11:HEAD:samtools-0.1.7a-1.fc11.src.rpm:1259569235
Index: samtools.spec
===================================================================
RCS file: /cvs/pkgs/rpms/samtools/devel/samtools.spec,v
retrieving revision 1.2
retrieving revision 1.3
diff -u -p -r1.2 -r1.3
--- samtools.spec 27 Jul 2009 03:47:37 -0000 1.2
+++ samtools.spec 30 Nov 2009 08:21:21 -0000 1.3
@@ -1,13 +1,12 @@
Name: samtools
-Version: 0.1.5c
-Release: 4%{?dist}
+Version: 0.1.7a
+Release: 1%{?dist}
Summary: Tools for nucleotide sequence alignments in the SAM format
Group: Applications/Engineering
License: MIT
URL: http://samtools.sourceforge.net/
Source0: http://downloads.sourceforge.net/%{name}/%{name}-%{version}.tar.bz2
-Patch0: samtools-0.1.5c-compilefix.patch
BuildRoot: %(mktemp -ud %{_tmppath}/%{name}-%{version}-%{release}-XXXXXX)
BuildRequires: zlib-devel >= 1.2.3
@@ -21,7 +20,6 @@ manipulating alignments in the SAM forma
%prep
%setup -q
-%patch0 -p1 -b .compilefix
%build
@@ -41,9 +39,10 @@ mkdir -p %{buildroot}%{_mandir}/man1/
cp -p samtools.1.gz %{buildroot}%{_mandir}/man1/
cd misc/
-install -p blast2sam.pl bowtie2sam.pl export2sam.pl interpolate_sam.pl \
- maq2sam-long maq2sam-short md5fa md5sum-lite novo2sam.pl samtools.pl \
- soap2sam.pl wgsim wgsim_eval.pl zoom2sam.pl %{buildroot}%{_bindir}
+install -p blast2sam.pl bowtie2sam.pl export2sam.pl interpolate_sam.pl \
+ maq2sam-long maq2sam-short md5fa md5sum-lite novo2sam.pl sam2vcf.pl \
+ samtools.pl soap2sam.pl wgsim wgsim_eval.pl zoom2sam.pl \
+ %{buildroot}%{_bindir}
%clean
@@ -52,12 +51,15 @@ rm -rf %{buildroot}
%files
%defattr(-,root,root,-)
-%doc AUTHORS ChangeLog COPYING INSTALL NEWS source.dot examples/
+%doc AUTHORS ChangeLog COPYING INSTALL NEWS examples/ samtools.txt
%{_bindir}/*
%{_mandir}/man1/*
%changelog
+* Mon Nov 30 2009 Rasmus Ory Nielsen <ron at ron.dk> - 0.1.7a-1
+- Updated to 0.1.7a.
+
* Sun Jul 26 2009 Fedora Release Engineering <rel-eng at lists.fedoraproject.org> - 0.1.5c-4
- Rebuilt for https://fedoraproject.org/wiki/Fedora_12_Mass_Rebuild
Index: sources
===================================================================
RCS file: /cvs/pkgs/rpms/samtools/devel/sources,v
retrieving revision 1.2
retrieving revision 1.3
diff -u -p -r1.2 -r1.3
--- sources 12 Jul 2009 19:10:51 -0000 1.2
+++ sources 30 Nov 2009 08:21:21 -0000 1.3
@@ -1 +1 @@
-62551fbad3f7c63c52fad99c3baf8580 samtools-0.1.5c.tar.bz2
+5e5aed8f0e0ec0009a3f0bb3e639c18b samtools-0.1.7a.tar.bz2
--- samtools-0.1.5c-compilefix.patch DELETED ---
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