[EMBOSS/f14/master] 6.3.1
Tom Callaway
spot at fedoraproject.org
Tue Aug 3 12:44:56 UTC 2010
commit 206681a71f7c25994942464ce1b8fec8e8288c9d
Author: Tom "spot" Callaway <tcallawa at redhat.com>
Date: Tue Aug 3 08:45:19 2010 -0400
6.3.1
EMBOSS-6.3.1-prevent-autotooling.patch |22568 ++++++++++++++++++++++++++++++++
EMBOSS-6.3.1-system-expat.patch | 80 +
EMBOSS-6.3.1-system-hack.patch | 23 +
EMBOSS-6.3.1-system-pcre.patch | 2776 ++++
EMBOSS-6.3.1-system-plplot.patch | 3154 +++++
EMBOSS-fedora.patch | 9 +-
EMBOSS.spec | 30 +-
README.fixes | 161 +-
sources | 4 +-
9 files changed, 28631 insertions(+), 174 deletions(-)
---
diff --git a/EMBOSS-6.3.1-prevent-autotooling.patch b/EMBOSS-6.3.1-prevent-autotooling.patch
new file mode 100644
index 0000000..afd3b89
--- /dev/null
+++ b/EMBOSS-6.3.1-prevent-autotooling.patch
@@ -0,0 +1,22568 @@
+diff -urP EMBOSS-6.3.1.orig/ajax/acd/Makefile.in EMBOSS-6.3.1/ajax/acd/Makefile.in
+--- EMBOSS-6.3.1.orig/ajax/acd/Makefile.in 2010-08-02 17:23:03.929163054 -0400
++++ EMBOSS-6.3.1/ajax/acd/Makefile.in 2010-08-02 17:23:23.136143079 -0400
+@@ -130,6 +130,8 @@
+ EXEEXT = @EXEEXT@
+ FGREP = @FGREP@
+ GREP = @GREP@
++HAVE_MEMMOVE = @HAVE_MEMMOVE@
++HAVE_STRERROR = @HAVE_STRERROR@
+ INSTALL = @INSTALL@
+ INSTALL_DATA = @INSTALL_DATA@
+ INSTALL_PROGRAM = @INSTALL_PROGRAM@
+diff -urP EMBOSS-6.3.1.orig/ajax/ajaxdb/Makefile.in EMBOSS-6.3.1/ajax/ajaxdb/Makefile.in
+--- EMBOSS-6.3.1.orig/ajax/ajaxdb/Makefile.in 2010-08-02 17:23:03.930162985 -0400
++++ EMBOSS-6.3.1/ajax/ajaxdb/Makefile.in 2010-08-02 17:23:23.228143498 -0400
+@@ -43,9 +43,8 @@
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
+- $(top_srcdir)/m4/pngdriver.m4 \
+- $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+- $(top_srcdir)/configure.in
++ $(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/postgresql.m4 \
++ $(top_srcdir)/m4/sgi.m4 $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+ $(ACLOCAL_M4)
+ mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
+@@ -131,6 +130,8 @@
+ EXEEXT = @EXEEXT@
+ FGREP = @FGREP@
+ GREP = @GREP@
++HAVE_MEMMOVE = @HAVE_MEMMOVE@
++HAVE_STRERROR = @HAVE_STRERROR@
+ INSTALL = @INSTALL@
+ INSTALL_DATA = @INSTALL_DATA@
+ INSTALL_PROGRAM = @INSTALL_PROGRAM@
+@@ -259,7 +260,7 @@
+ @ISCYGWIN_TRUE at -L../ensembl -lensembl lajax -leplplot -leexpat -lepcre -lezlib
+
+ @ESYSTEMLIBS_FALSE at EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/zlib -I$(top_srcdir)/ajax/pcre -I$(top_srcdir)/plplot
+-INCLUDES = $(PLPLOT_CFLAGS) \
++INCLUDES = $(PLPLOT_CFLAGS) \
+ $(EXTRA_INCLUDES) \
+ -I$(top_srcdir)/ajax/core -I$(top_srcdir)/ajax/ensembl
+
+diff -urP EMBOSS-6.3.1.orig/ajax/core/Makefile.in EMBOSS-6.3.1/ajax/core/Makefile.in
+--- EMBOSS-6.3.1.orig/ajax/core/Makefile.in 2010-08-02 17:23:03.931143219 -0400
++++ EMBOSS-6.3.1/ajax/core/Makefile.in 2010-08-02 17:23:23.331143149 -0400
+@@ -43,9 +43,8 @@
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
+- $(top_srcdir)/m4/pngdriver.m4 \
+- $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+- $(top_srcdir)/configure.in
++ $(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/postgresql.m4 \
++ $(top_srcdir)/m4/sgi.m4 $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+ $(ACLOCAL_M4)
+ mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
+@@ -140,6 +139,8 @@
+ EXEEXT = @EXEEXT@
+ FGREP = @FGREP@
+ GREP = @GREP@
++HAVE_MEMMOVE = @HAVE_MEMMOVE@
++HAVE_STRERROR = @HAVE_STRERROR@
+ INSTALL = @INSTALL@
+ INSTALL_DATA = @INSTALL_DATA@
+ INSTALL_PROGRAM = @INSTALL_PROGRAM@
+diff -urP EMBOSS-6.3.1.orig/ajax/ensembl/Makefile.in EMBOSS-6.3.1/ajax/ensembl/Makefile.in
+--- EMBOSS-6.3.1.orig/ajax/ensembl/Makefile.in 2010-08-02 17:23:03.932150483 -0400
++++ EMBOSS-6.3.1/ajax/ensembl/Makefile.in 2010-08-02 17:23:23.433143079 -0400
+@@ -43,9 +43,8 @@
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
+- $(top_srcdir)/m4/pngdriver.m4 \
+- $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+- $(top_srcdir)/configure.in
++ $(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/postgresql.m4 \
++ $(top_srcdir)/m4/sgi.m4 $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+ $(ACLOCAL_M4)
+ mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
+@@ -144,6 +143,8 @@
+ EXEEXT = @EXEEXT@
+ FGREP = @FGREP@
+ GREP = @GREP@
++HAVE_MEMMOVE = @HAVE_MEMMOVE@
++HAVE_STRERROR = @HAVE_STRERROR@
+ INSTALL = @INSTALL@
+ INSTALL_DATA = @INSTALL_DATA@
+ INSTALL_PROGRAM = @INSTALL_PROGRAM@
+diff -urP EMBOSS-6.3.1.orig/ajax/graphics/Makefile.in EMBOSS-6.3.1/ajax/graphics/Makefile.in
+--- EMBOSS-6.3.1.orig/ajax/graphics/Makefile.in 2010-08-02 17:23:03.937163613 -0400
++++ EMBOSS-6.3.1/ajax/graphics/Makefile.in 2010-08-02 17:23:23.525143079 -0400
+@@ -43,9 +43,8 @@
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
+- $(top_srcdir)/m4/pngdriver.m4 \
+- $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+- $(top_srcdir)/configure.in
++ $(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/postgresql.m4 \
++ $(top_srcdir)/m4/sgi.m4 $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+ $(ACLOCAL_M4)
+ mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
+@@ -131,6 +130,8 @@
+ EXEEXT = @EXEEXT@
+ FGREP = @FGREP@
+ GREP = @GREP@
++HAVE_MEMMOVE = @HAVE_MEMMOVE@
++HAVE_STRERROR = @HAVE_STRERROR@
+ INSTALL = @INSTALL@
+ INSTALL_DATA = @INSTALL_DATA@
+ INSTALL_PROGRAM = @INSTALL_PROGRAM@
+diff -urP EMBOSS-6.3.1.orig/ajax/Makefile.in EMBOSS-6.3.1/ajax/Makefile.in
+--- EMBOSS-6.3.1.orig/ajax/Makefile.in 2010-08-02 17:23:03.937163613 -0400
++++ EMBOSS-6.3.1/ajax/Makefile.in 2010-08-02 17:23:23.040142730 -0400
+@@ -40,9 +40,8 @@
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
+- $(top_srcdir)/m4/pngdriver.m4 \
+- $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+- $(top_srcdir)/configure.in
++ $(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/postgresql.m4 \
++ $(top_srcdir)/m4/sgi.m4 $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+ $(ACLOCAL_M4)
+ mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
+@@ -64,7 +63,7 @@
+ distdir
+ ETAGS = etags
+ CTAGS = ctags
+-DIST_SUBDIRS = pcre expat zlib core graphics ensembl ajaxdb acd
++DIST_SUBDIRS = expat zlib pcre core graphics ensembl ajaxdb acd
+ DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST)
+ am__relativize = \
+ dir0=`pwd`; \
+@@ -122,6 +121,8 @@
+ EXEEXT = @EXEEXT@
+ FGREP = @FGREP@
+ GREP = @GREP@
++HAVE_MEMMOVE = @HAVE_MEMMOVE@
++HAVE_STRERROR = @HAVE_STRERROR@
+ INSTALL = @INSTALL@
+ INSTALL_DATA = @INSTALL_DATA@
+ INSTALL_PROGRAM = @INSTALL_PROGRAM@
+diff -urP EMBOSS-6.3.1.orig/autom4te.cache/output.0 EMBOSS-6.3.1/autom4te.cache/output.0
+--- EMBOSS-6.3.1.orig/autom4te.cache/output.0 1969-12-31 19:00:00.000000000 -0500
++++ EMBOSS-6.3.1/autom4te.cache/output.0 2010-08-02 17:23:22.875143219 -0400
+@@ -0,0 +1,17831 @@
++@%:@! /bin/sh
++@%:@ Guess values for system-dependent variables and create Makefiles.
++@%:@ Generated by GNU Autoconf 2.65.
++@%:@
++@%:@
++@%:@ Copyright (C) 1992, 1993, 1994, 1995, 1996, 1998, 1999, 2000, 2001,
++@%:@ 2002, 2003, 2004, 2005, 2006, 2007, 2008, 2009 Free Software Foundation,
++@%:@ Inc.
++@%:@
++@%:@
++@%:@ This configure script is free software; the Free Software Foundation
++@%:@ gives unlimited permission to copy, distribute and modify it.
++## -------------------- ##
++## M4sh Initialization. ##
++## -------------------- ##
++
++# Be more Bourne compatible
++DUALCASE=1; export DUALCASE # for MKS sh
++if test -n "${ZSH_VERSION+set}" && (emulate sh) >/dev/null 2>&1; then :
++ emulate sh
++ NULLCMD=:
++ # Pre-4.2 versions of Zsh do word splitting on ${1+"$@"}, which
++ # is contrary to our usage. Disable this feature.
++ alias -g '${1+"$@"}'='"$@"'
++ setopt NO_GLOB_SUBST
++else
++ case `(set -o) 2>/dev/null` in @%:@(
++ *posix*) :
++ set -o posix ;; @%:@(
++ *) :
++ ;;
++esac
++fi
++
++
++as_nl='
++'
++export as_nl
++# Printing a long string crashes Solaris 7 /usr/bin/printf.
++as_echo='\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\'
++as_echo=$as_echo$as_echo$as_echo$as_echo$as_echo
++as_echo=$as_echo$as_echo$as_echo$as_echo$as_echo$as_echo
++# Prefer a ksh shell builtin over an external printf program on Solaris,
++# but without wasting forks for bash or zsh.
++if test -z "$BASH_VERSION$ZSH_VERSION" \
++ && (test "X`print -r -- $as_echo`" = "X$as_echo") 2>/dev/null; then
++ as_echo='print -r --'
++ as_echo_n='print -rn --'
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++ as_echo_n='printf %s'
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++ if test "X`(/usr/ucb/echo -n -n $as_echo) 2>/dev/null`" = "X-n $as_echo"; then
++ as_echo_body='eval /usr/ucb/echo -n "$1$as_nl"'
++ as_echo_n='/usr/ucb/echo -n'
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++ as_echo_body='eval expr "X$1" : "X\\(.*\\)"'
++ as_echo_n_body='eval
++ arg=$1;
++ case $arg in @%:@(
++ *"$as_nl"*)
++ expr "X$arg" : "X\\(.*\\)$as_nl";
++ arg=`expr "X$arg" : ".*$as_nl\\(.*\\)"`;;
++ esac;
++ expr "X$arg" : "X\\(.*\\)" | tr -d "$as_nl"
++ '
++ export as_echo_n_body
++ as_echo_n='sh -c $as_echo_n_body as_echo'
++ fi
++ export as_echo_body
++ as_echo='sh -c $as_echo_body as_echo'
++fi
++
++# The user is always right.
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++ PATH_SEPARATOR=:
++ (PATH='/bin;/bin'; FPATH=$PATH; sh -c :) >/dev/null 2>&1 && {
++ (PATH='/bin:/bin'; FPATH=$PATH; sh -c :) >/dev/null 2>&1 ||
++ PATH_SEPARATOR=';'
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++
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++ *) as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
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++IFS=$as_save_IFS
++
++ ;;
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++if test "x$as_myself" = x; then
++ as_myself=$0
++fi
++if test ! -f "$as_myself"; then
++ $as_echo "$as_myself: error: cannot find myself; rerun with an absolute file name" >&2
++ exit 1
++fi
++
++# Unset variables that we do not need and which cause bugs (e.g. in
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++# suppresses any "Segmentation fault" message there. '((' could
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++PS1='$ '
++PS2='> '
++PS4='+ '
++
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++export LC_ALL
++LANGUAGE=C
++export LANGUAGE
++
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++
++if test "x$CONFIG_SHELL" = x; then
++ as_bourne_compatible="if test -n \"\${ZSH_VERSION+set}\" && (emulate sh) >/dev/null 2>&1; then :
++ emulate sh
++ NULLCMD=:
++ # Pre-4.2 versions of Zsh do word splitting on \${1+\"\$@\"}, which
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++ alias -g '\${1+\"\$@\"}'='\"\$@\"'
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++ *posix*) :
++ set -o posix ;; @%:@(
++ *) :
++ ;;
++esac
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++
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++as_found=false
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++ for as_base in sh bash ksh sh5; do
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++ { $as_echo "$as_bourne_compatible""$as_required" | as_run=a "$as_shell"; } 2>/dev/null; then :
++ CONFIG_SHELL=$as_shell as_have_required=yes
++ if { $as_echo "$as_bourne_compatible""$as_suggested" | as_run=a "$as_shell"; } 2>/dev/null; then :
++ break 2
++fi
++fi
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++
++
++ if test "x$CONFIG_SHELL" != x; then :
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++ BASH_ENV=/dev/null
++ ENV=/dev/null
++ (unset BASH_ENV) >/dev/null 2>&1 && unset BASH_ENV ENV
++ export CONFIG_SHELL
++ exec "$CONFIG_SHELL" "$as_myself" ${1+"$@"}
++fi
++
++ if test x$as_have_required = xno; then :
++ $as_echo "$0: This script requires a shell more modern than all"
++ $as_echo "$0: the shells that I found on your system."
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++ $as_echo "$0: be upgraded to zsh 4.3.4 or later."
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++ $as_echo "$0: Please tell bug-autoconf at gnu.org about your system,
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++ exit 1
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++SHELL=${CONFIG_SHELL-/bin/sh}
++export SHELL
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++CLICOLOR_FORCE= GREP_OPTIONS=
++unset CLICOLOR_FORCE GREP_OPTIONS
++
++## --------------------- ##
++## M4sh Shell Functions. ##
++## --------------------- ##
++@%:@ as_fn_unset VAR
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++@%:@ Portably unset VAR.
++as_fn_unset ()
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++@%:@ as_fn_set_status STATUS
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++as_fn_set_status ()
++{
++ return $1
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++@%:@ as_fn_exit STATUS
++@%:@ -----------------
++@%:@ Exit the shell with STATUS, even in a "trap 0" or "set -e" context.
++as_fn_exit ()
++{
++ set +e
++ as_fn_set_status $1
++ exit $1
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++@%:@ as_fn_mkdir_p
++@%:@ -------------
++@%:@ Create "@S|@as_dir" as a directory, including parents if necessary.
++as_fn_mkdir_p ()
++{
++
++ case $as_dir in #(
++ -*) as_dir=./$as_dir;;
++ esac
++ test -d "$as_dir" || eval $as_mkdir_p || {
++ as_dirs=
++ while :; do
++ case $as_dir in #(
++ *\'*) as_qdir=`$as_echo "$as_dir" | sed "s/'/'\\\\\\\\''/g"`;; #'(
++ *) as_qdir=$as_dir;;
++ esac
++ as_dirs="'$as_qdir' $as_dirs"
++ as_dir=`$as_dirname -- "$as_dir" ||
++$as_expr X"$as_dir" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
++ X"$as_dir" : 'X\(//\)[^/]' \| \
++ X"$as_dir" : 'X\(//\)$' \| \
++ X"$as_dir" : 'X\(/\)' \| . 2>/dev/null ||
++$as_echo X"$as_dir" |
++ sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{
++ s//\1/
++ q
++ }
++ /^X\(\/\/\)[^/].*/{
++ s//\1/
++ q
++ }
++ /^X\(\/\/\)$/{
++ s//\1/
++ q
++ }
++ /^X\(\/\).*/{
++ s//\1/
++ q
++ }
++ s/.*/./; q'`
++ test -d "$as_dir" && break
++ done
++ test -z "$as_dirs" || eval "mkdir $as_dirs"
++ } || test -d "$as_dir" || as_fn_error "cannot create directory $as_dir"
++
++
++} @%:@ as_fn_mkdir_p
++@%:@ as_fn_append VAR VALUE
++@%:@ ----------------------
++@%:@ Append the text in VALUE to the end of the definition contained in VAR. Take
++@%:@ advantage of any shell optimizations that allow amortized linear growth over
++@%:@ repeated appends, instead of the typical quadratic growth present in naive
++@%:@ implementations.
++if (eval "as_var=1; as_var+=2; test x\$as_var = x12") 2>/dev/null; then :
++ eval 'as_fn_append ()
++ {
++ eval $1+=\$2
++ }'
++else
++ as_fn_append ()
++ {
++ eval $1=\$$1\$2
++ }
++fi # as_fn_append
++
++@%:@ as_fn_arith ARG...
++@%:@ ------------------
++@%:@ Perform arithmetic evaluation on the ARGs, and store the result in the
++@%:@ global @S|@as_val. Take advantage of shells that can avoid forks. The arguments
++@%:@ must be portable across @S|@(()) and expr.
++if (eval "test \$(( 1 + 1 )) = 2") 2>/dev/null; then :
++ eval 'as_fn_arith ()
++ {
++ as_val=$(( $* ))
++ }'
++else
++ as_fn_arith ()
++ {
++ as_val=`expr "$@" || test $? -eq 1`
++ }
++fi # as_fn_arith
++
++
++@%:@ as_fn_error ERROR [LINENO LOG_FD]
++@%:@ ---------------------------------
++@%:@ Output "`basename @S|@0`: error: ERROR" to stderr. If LINENO and LOG_FD are
++@%:@ provided, also output the error to LOG_FD, referencing LINENO. Then exit the
++@%:@ script with status @S|@?, using 1 if that was 0.
++as_fn_error ()
++{
++ as_status=$?; test $as_status -eq 0 && as_status=1
++ if test "$3"; then
++ as_lineno=${as_lineno-"$2"} as_lineno_stack=as_lineno_stack=$as_lineno_stack
++ $as_echo "$as_me:${as_lineno-$LINENO}: error: $1" >&$3
++ fi
++ $as_echo "$as_me: error: $1" >&2
++ as_fn_exit $as_status
++} @%:@ as_fn_error
++
++if expr a : '\(a\)' >/dev/null 2>&1 &&
++ test "X`expr 00001 : '.*\(...\)'`" = X001; then
++ as_expr=expr
++else
++ as_expr=false
++fi
++
++if (basename -- /) >/dev/null 2>&1 && test "X`basename -- / 2>&1`" = "X/"; then
++ as_basename=basename
++else
++ as_basename=false
++fi
++
++if (as_dir=`dirname -- /` && test "X$as_dir" = X/) >/dev/null 2>&1; then
++ as_dirname=dirname
++else
++ as_dirname=false
++fi
++
++as_me=`$as_basename -- "$0" ||
++$as_expr X/"$0" : '.*/\([^/][^/]*\)/*$' \| \
++ X"$0" : 'X\(//\)$' \| \
++ X"$0" : 'X\(/\)' \| . 2>/dev/null ||
++$as_echo X/"$0" |
++ sed '/^.*\/\([^/][^/]*\)\/*$/{
++ s//\1/
++ q
++ }
++ /^X\/\(\/\/\)$/{
++ s//\1/
++ q
++ }
++ /^X\/\(\/\).*/{
++ s//\1/
++ q
++ }
++ s/.*/./; q'`
++
++# Avoid depending upon Character Ranges.
++as_cr_letters='abcdefghijklmnopqrstuvwxyz'
++as_cr_LETTERS='ABCDEFGHIJKLMNOPQRSTUVWXYZ'
++as_cr_Letters=$as_cr_letters$as_cr_LETTERS
++as_cr_digits='0123456789'
++as_cr_alnum=$as_cr_Letters$as_cr_digits
++
++
++ as_lineno_1=$LINENO as_lineno_1a=$LINENO
++ as_lineno_2=$LINENO as_lineno_2a=$LINENO
++ eval 'test "x$as_lineno_1'$as_run'" != "x$as_lineno_2'$as_run'" &&
++ test "x`expr $as_lineno_1'$as_run' + 1`" = "x$as_lineno_2'$as_run'"' || {
++ # Blame Lee E. McMahon (1931-1989) for sed's syntax. :-)
++ sed -n '
++ p
++ /[$]LINENO/=
++ ' <$as_myself |
++ sed '
++ s/[$]LINENO.*/&-/
++ t lineno
++ b
++ :lineno
++ N
++ :loop
++ s/[$]LINENO\([^'$as_cr_alnum'_].*\n\)\(.*\)/\2\1\2/
++ t loop
++ s/-\n.*//
++ ' >$as_me.lineno &&
++ chmod +x "$as_me.lineno" ||
++ { $as_echo "$as_me: error: cannot create $as_me.lineno; rerun with a POSIX shell" >&2; as_fn_exit 1; }
++
++ # Don't try to exec as it changes $[0], causing all sort of problems
++ # (the dirname of $[0] is not the place where we might find the
++ # original and so on. Autoconf is especially sensitive to this).
++ . "./$as_me.lineno"
++ # Exit status is that of the last command.
++ exit
++}
++
++ECHO_C= ECHO_N= ECHO_T=
++case `echo -n x` in @%:@(((((
++-n*)
++ case `echo 'xy\c'` in
++ *c*) ECHO_T=' ';; # ECHO_T is single tab character.
++ xy) ECHO_C='\c';;
++ *) echo `echo ksh88 bug on AIX 6.1` > /dev/null
++ ECHO_T=' ';;
++ esac;;
++*)
++ ECHO_N='-n';;
++esac
++
++rm -f conf$$ conf$$.exe conf$$.file
++if test -d conf$$.dir; then
++ rm -f conf$$.dir/conf$$.file
++else
++ rm -f conf$$.dir
++ mkdir conf$$.dir 2>/dev/null
++fi
++if (echo >conf$$.file) 2>/dev/null; then
++ if ln -s conf$$.file conf$$ 2>/dev/null; then
++ as_ln_s='ln -s'
++ # ... but there are two gotchas:
++ # 1) On MSYS, both `ln -s file dir' and `ln file dir' fail.
++ # 2) DJGPP < 2.04 has no symlinks; `ln -s' creates a wrapper executable.
++ # In both cases, we have to default to `cp -p'.
++ ln -s conf$$.file conf$$.dir 2>/dev/null && test ! -f conf$$.exe ||
++ as_ln_s='cp -p'
++ elif ln conf$$.file conf$$ 2>/dev/null; then
++ as_ln_s=ln
++ else
++ as_ln_s='cp -p'
++ fi
++else
++ as_ln_s='cp -p'
++fi
++rm -f conf$$ conf$$.exe conf$$.dir/conf$$.file conf$$.file
++rmdir conf$$.dir 2>/dev/null
++
++if mkdir -p . 2>/dev/null; then
++ as_mkdir_p='mkdir -p "$as_dir"'
++else
++ test -d ./-p && rmdir ./-p
++ as_mkdir_p=false
++fi
++
++if test -x / >/dev/null 2>&1; then
++ as_test_x='test -x'
++else
++ if ls -dL / >/dev/null 2>&1; then
++ as_ls_L_option=L
++ else
++ as_ls_L_option=
++ fi
++ as_test_x='
++ eval sh -c '\''
++ if test -d "$1"; then
++ test -d "$1/.";
++ else
++ case $1 in @%:@(
++ -*)set "./$1";;
++ esac;
++ case `ls -ld'$as_ls_L_option' "$1" 2>/dev/null` in @%:@((
++ ???[sx]*):;;*)false;;esac;fi
++ '\'' sh
++ '
++fi
++as_executable_p=$as_test_x
++
++# Sed expression to map a string onto a valid CPP name.
++as_tr_cpp="eval sed 'y%*$as_cr_letters%P$as_cr_LETTERS%;s%[^_$as_cr_alnum]%_%g'"
++
++# Sed expression to map a string onto a valid variable name.
++as_tr_sh="eval sed 'y%*+%pp%;s%[^_$as_cr_alnum]%_%g'"
++
++
++
++# Check that we are running under the correct shell.
++SHELL=${CONFIG_SHELL-/bin/sh}
++
++case X$lt_ECHO in
++X*--fallback-echo)
++ # Remove one level of quotation (which was required for Make).
++ ECHO=`echo "$lt_ECHO" | sed 's,\\\\\$\\$0,'$0','`
++ ;;
++esac
++
++ECHO=${lt_ECHO-echo}
++if test "X$1" = X--no-reexec; then
++ # Discard the --no-reexec flag, and continue.
++ shift
++elif test "X$1" = X--fallback-echo; then
++ # Avoid inline document here, it may be left over
++ :
++elif test "X`{ $ECHO '\t'; } 2>/dev/null`" = 'X\t' ; then
++ # Yippee, $ECHO works!
++ :
++else
++ # Restart under the correct shell.
++ exec $SHELL "$0" --no-reexec ${1+"$@"}
++fi
++
++if test "X$1" = X--fallback-echo; then
++ # used as fallback echo
++ shift
++ cat <<_LT_EOF
++$*
++_LT_EOF
++ exit 0
++fi
++
++# The HP-UX ksh and POSIX shell print the target directory to stdout
++# if CDPATH is set.
++(unset CDPATH) >/dev/null 2>&1 && unset CDPATH
++
++if test -z "$lt_ECHO"; then
++ if test "X${echo_test_string+set}" != Xset; then
++ # find a string as large as possible, as long as the shell can cope with it
++ for cmd in 'sed 50q "$0"' 'sed 20q "$0"' 'sed 10q "$0"' 'sed 2q "$0"' 'echo test'; do
++ # expected sizes: less than 2Kb, 1Kb, 512 bytes, 16 bytes, ...
++ if { echo_test_string=`eval $cmd`; } 2>/dev/null &&
++ { test "X$echo_test_string" = "X$echo_test_string"; } 2>/dev/null
++ then
++ break
++ fi
++ done
++ fi
++
++ if test "X`{ $ECHO '\t'; } 2>/dev/null`" = 'X\t' &&
++ echo_testing_string=`{ $ECHO "$echo_test_string"; } 2>/dev/null` &&
++ test "X$echo_testing_string" = "X$echo_test_string"; then
++ :
++ else
++ # The Solaris, AIX, and Digital Unix default echo programs unquote
++ # backslashes. This makes it impossible to quote backslashes using
++ # echo "$something" | sed 's/\\/\\\\/g'
++ #
++ # So, first we look for a working echo in the user's PATH.
++
++ lt_save_ifs="$IFS"; IFS=$PATH_SEPARATOR
++ for dir in $PATH /usr/ucb; do
++ IFS="$lt_save_ifs"
++ if (test -f $dir/echo || test -f $dir/echo$ac_exeext) &&
++ test "X`($dir/echo '\t') 2>/dev/null`" = 'X\t' &&
++ echo_testing_string=`($dir/echo "$echo_test_string") 2>/dev/null` &&
++ test "X$echo_testing_string" = "X$echo_test_string"; then
++ ECHO="$dir/echo"
++ break
++ fi
++ done
++ IFS="$lt_save_ifs"
++
++ if test "X$ECHO" = Xecho; then
++ # We didn't find a better echo, so look for alternatives.
++ if test "X`{ print -r '\t'; } 2>/dev/null`" = 'X\t' &&
++ echo_testing_string=`{ print -r "$echo_test_string"; } 2>/dev/null` &&
++ test "X$echo_testing_string" = "X$echo_test_string"; then
++ # This shell has a builtin print -r that does the trick.
++ ECHO='print -r'
++ elif { test -f /bin/ksh || test -f /bin/ksh$ac_exeext; } &&
++ test "X$CONFIG_SHELL" != X/bin/ksh; then
++ # If we have ksh, try running configure again with it.
++ ORIGINAL_CONFIG_SHELL=${CONFIG_SHELL-/bin/sh}
++ export ORIGINAL_CONFIG_SHELL
++ CONFIG_SHELL=/bin/ksh
++ export CONFIG_SHELL
++ exec $CONFIG_SHELL "$0" --no-reexec ${1+"$@"}
++ else
++ # Try using printf.
++ ECHO='printf %s\n'
++ if test "X`{ $ECHO '\t'; } 2>/dev/null`" = 'X\t' &&
++ echo_testing_string=`{ $ECHO "$echo_test_string"; } 2>/dev/null` &&
++ test "X$echo_testing_string" = "X$echo_test_string"; then
++ # Cool, printf works
++ :
++ elif echo_testing_string=`($ORIGINAL_CONFIG_SHELL "$0" --fallback-echo '\t') 2>/dev/null` &&
++ test "X$echo_testing_string" = 'X\t' &&
++ echo_testing_string=`($ORIGINAL_CONFIG_SHELL "$0" --fallback-echo "$echo_test_string") 2>/dev/null` &&
++ test "X$echo_testing_string" = "X$echo_test_string"; then
++ CONFIG_SHELL=$ORIGINAL_CONFIG_SHELL
++ export CONFIG_SHELL
++ SHELL="$CONFIG_SHELL"
++ export SHELL
++ ECHO="$CONFIG_SHELL $0 --fallback-echo"
++ elif echo_testing_string=`($CONFIG_SHELL "$0" --fallback-echo '\t') 2>/dev/null` &&
++ test "X$echo_testing_string" = 'X\t' &&
++ echo_testing_string=`($CONFIG_SHELL "$0" --fallback-echo "$echo_test_string") 2>/dev/null` &&
++ test "X$echo_testing_string" = "X$echo_test_string"; then
++ ECHO="$CONFIG_SHELL $0 --fallback-echo"
++ else
++ # maybe with a smaller string...
++ prev=:
++
++ for cmd in 'echo test' 'sed 2q "$0"' 'sed 10q "$0"' 'sed 20q "$0"' 'sed 50q "$0"'; do
++ if { test "X$echo_test_string" = "X`eval $cmd`"; } 2>/dev/null
++ then
++ break
++ fi
++ prev="$cmd"
++ done
++
++ if test "$prev" != 'sed 50q "$0"'; then
++ echo_test_string=`eval $prev`
++ export echo_test_string
++ exec ${ORIGINAL_CONFIG_SHELL-${CONFIG_SHELL-/bin/sh}} "$0" ${1+"$@"}
++ else
++ # Oops. We lost completely, so just stick with echo.
++ ECHO=echo
++ fi
++ fi
++ fi
++ fi
++ fi
++fi
++
++# Copy echo and quote the copy suitably for passing to libtool from
++# the Makefile, instead of quoting the original, which is used later.
++lt_ECHO=$ECHO
++if test "X$lt_ECHO" = "X$CONFIG_SHELL $0 --fallback-echo"; then
++ lt_ECHO="$CONFIG_SHELL \\\$\$0 --fallback-echo"
++fi
++
++
++
++
++test -n "$DJDIR" || exec 7<&0 </dev/null
++exec 6>&1
++
++# Name of the host.
++# hostname on some systems (SVR3.2, Linux) returns a bogus exit status,
++# so uname gets run too.
++ac_hostname=`(hostname || uname -n) 2>/dev/null | sed 1q`
++
++#
++# Initializations.
++#
++ac_default_prefix=/usr/local
++ac_clean_files=
++ac_config_libobj_dir=.
++LIB@&t at OBJS=
++cross_compiling=no
++subdirs=
++MFLAGS=
++MAKEFLAGS=
++
++# Identity of this package.
++PACKAGE_NAME=
++PACKAGE_TARNAME=
++PACKAGE_VERSION=
++PACKAGE_STRING=
++PACKAGE_BUGREPORT=
++PACKAGE_URL=
++
++ac_unique_file="ajax/core/ajmath.c"
++# Factoring default headers for most tests.
++ac_includes_default="\
++#include <stdio.h>
++#ifdef HAVE_SYS_TYPES_H
++# include <sys/types.h>
++#endif
++#ifdef HAVE_SYS_STAT_H
++# include <sys/stat.h>
++#endif
++#ifdef STDC_HEADERS
++# include <stdlib.h>
++# include <stddef.h>
++#else
++# ifdef HAVE_STDLIB_H
++# include <stdlib.h>
++# endif
++#endif
++#ifdef HAVE_STRING_H
++# if !defined STDC_HEADERS && defined HAVE_MEMORY_H
++# include <memory.h>
++# endif
++# include <string.h>
++#endif
++#ifdef HAVE_STRINGS_H
++# include <strings.h>
++#endif
++#ifdef HAVE_INTTYPES_H
++# include <inttypes.h>
++#endif
++#ifdef HAVE_STDINT_H
++# include <stdint.h>
++#endif
++#ifdef HAVE_UNISTD_H
++# include <unistd.h>
++#endif"
++
++ac_subst_vars='am__EXEEXT_FALSE
++am__EXEEXT_TRUE
++LTLIBOBJS
++LIB@&t at OBJS
++NEEDAJAX
++NEEDAJAX_FALSE
++NEEDAJAX_TRUE
++ISAIXIA64
++ISSHARED_FALSE
++ISSHARED_TRUE
++ISAIXIA64_FALSE
++ISAIXIA64_TRUE
++ISCYGWIN
++ISCYGWIN_FALSE
++ISCYGWIN_TRUE
++DEVWARNINGS
++DEVWARNINGS_FALSE
++DEVWARNINGS_TRUE
++DEVWARN_CFLAGS
++ISGCC_FALSE
++ISGCC_TRUE
++PURIFY_FALSE
++PURIFY_TRUE
++WARNINGS
++WARNINGS_FALSE
++WARNINGS_TRUE
++WARN_CFLAGS
++ESYSTEMLIBS
++ESYSTEMLIBS_FALSE
++ESYSTEMLIBS_TRUE
++POSIX_MALLOC_THRESHOLD
++PCRE_POSIXLIB_VERSION
++PCRE_LIB_VERSION
++PCRE_VERSION
++PCRE_DATE
++PCRE_MINOR
++PCRE_MAJOR
++HAVE_STRERROR
++HAVE_MEMMOVE
++EHAVEANT
++EHAVEANT_FALSE
++EHAVEANT_TRUE
++ant_in_path
++javac_in_path
++POSTGRESQL_LDFLAGS
++POSTGRESQL_CFLAGS
++POSTGRESQL_VERSION
++PG_CONFIG
++MYSQL_LDFLAGS
++MYSQL_CFLAGS
++MYSQL_VERSION
++MYSQL_CONFIG
++PLPLOT_LIBS
++PLPLOT_CFLAGS
++JAVA_OK
++havejavac
++AMPDF_FALSE
++AMPDF_TRUE
++AMPNG_FALSE
++AMPNG_TRUE
++XLIB
++X_EXTRA_LIBS
++X_LIBS
++X_PRE_LIBS
++X_CFLAGS
++XMKMF
++AJAX_SYSTEM
++EMBOSS_TOP
++AJAX_FIXED_ROOT
++CPP
++OTOOL64
++OTOOL
++LIPO
++NMEDIT
++DSYMUTIL
++lt_ECHO
++RANLIB
++AR
++OBJDUMP
++LN_S
++NM
++ac_ct_DUMPBIN
++DUMPBIN
++LD
++FGREP
++EGREP
++GREP
++SED
++am__fastdepCC_FALSE
++am__fastdepCC_TRUE
++CCDEPMODE
++AMDEPBACKSLASH
++AMDEP_FALSE
++AMDEP_TRUE
++am__quote
++am__include
++DEPDIR
++OBJEXT
++EXEEXT
++ac_ct_CC
++CPPFLAGS
++LDFLAGS
++CFLAGS
++CC
++host_os
++host_vendor
++host_cpu
++host
++build_os
++build_vendor
++build_cpu
++build
++LIBTOOL
++am__untar
++am__tar
++AMTAR
++am__leading_dot
++SET_MAKE
++AWK
++mkdir_p
++MKDIR_P
++INSTALL_STRIP_PROGRAM
++STRIP
++install_sh
++MAKEINFO
++AUTOHEADER
++AUTOMAKE
++AUTOCONF
++ACLOCAL
++VERSION
++PACKAGE
++CYGPATH_W
++am__isrc
++INSTALL_DATA
++INSTALL_SCRIPT
++INSTALL_PROGRAM
++target_alias
++host_alias
++build_alias
++LIBS
++ECHO_T
++ECHO_N
++ECHO_C
++DEFS
++mandir
++localedir
++libdir
++psdir
++pdfdir
++dvidir
++htmldir
++infodir
++docdir
++oldincludedir
++includedir
++localstatedir
++sharedstatedir
++sysconfdir
++datadir
++datarootdir
++libexecdir
++sbindir
++bindir
++program_transform_name
++prefix
++exec_prefix
++PACKAGE_URL
++PACKAGE_BUGREPORT
++PACKAGE_STRING
++PACKAGE_VERSION
++PACKAGE_TARNAME
++PACKAGE_NAME
++PATH_SEPARATOR
++SHELL'
++ac_subst_files=''
++ac_user_opts='
++enable_option_checking
++enable_shared
++enable_static
++with_pic
++enable_fast_install
++enable_dependency_tracking
++with_gnu_ld
++enable_libtool_lock
++with_sgiabi
++enable_64
++with_x
++with_docroot
++with_gccprofile
++with_java
++with_javaos
++with_hpdf
++with_pngdriver
++with_auth
++with_mysql
++with_postgresql
++enable_debug
++enable_large
++enable_systemlibs
++enable_purify
++enable_warnings
++enable_devwarnings
++enable_devextrawarnings
++enable_mprobe
++enable_savestats
++with_thread
++'
++ ac_precious_vars='build_alias
++host_alias
++target_alias
++CC
++CFLAGS
++LDFLAGS
++LIBS
++CPPFLAGS
++CPP
++XMKMF'
++
++
++# Initialize some variables set by options.
++ac_init_help=
++ac_init_version=false
++ac_unrecognized_opts=
++ac_unrecognized_sep=
++# The variables have the same names as the options, with
++# dashes changed to underlines.
++cache_file=/dev/null
++exec_prefix=NONE
++no_create=
++no_recursion=
++prefix=NONE
++program_prefix=NONE
++program_suffix=NONE
++program_transform_name=s,x,x,
++silent=
++site=
++srcdir=
++verbose=
++x_includes=NONE
++x_libraries=NONE
++
++# Installation directory options.
++# These are left unexpanded so users can "make install exec_prefix=/foo"
++# and all the variables that are supposed to be based on exec_prefix
++# by default will actually change.
++# Use braces instead of parens because sh, perl, etc. also accept them.
++# (The list follows the same order as the GNU Coding Standards.)
++bindir='${exec_prefix}/bin'
++sbindir='${exec_prefix}/sbin'
++libexecdir='${exec_prefix}/libexec'
++datarootdir='${prefix}/share'
++datadir='${datarootdir}'
++sysconfdir='${prefix}/etc'
++sharedstatedir='${prefix}/com'
++localstatedir='${prefix}/var'
++includedir='${prefix}/include'
++oldincludedir='/usr/include'
++docdir='${datarootdir}/doc/${PACKAGE}'
++infodir='${datarootdir}/info'
++htmldir='${docdir}'
++dvidir='${docdir}'
++pdfdir='${docdir}'
++psdir='${docdir}'
++libdir='${exec_prefix}/lib'
++localedir='${datarootdir}/locale'
++mandir='${datarootdir}/man'
++
++ac_prev=
++ac_dashdash=
++for ac_option
++do
++ # If the previous option needs an argument, assign it.
++ if test -n "$ac_prev"; then
++ eval $ac_prev=\$ac_option
++ ac_prev=
++ continue
++ fi
++
++ case $ac_option in
++ *=*) ac_optarg=`expr "X$ac_option" : '[^=]*=\(.*\)'` ;;
++ *) ac_optarg=yes ;;
++ esac
++
++ # Accept the important Cygnus configure options, so we can diagnose typos.
++
++ case $ac_dashdash$ac_option in
++ --)
++ ac_dashdash=yes ;;
++
++ -bindir | --bindir | --bindi | --bind | --bin | --bi)
++ ac_prev=bindir ;;
++ -bindir=* | --bindir=* | --bindi=* | --bind=* | --bin=* | --bi=*)
++ bindir=$ac_optarg ;;
++
++ -build | --build | --buil | --bui | --bu)
++ ac_prev=build_alias ;;
++ -build=* | --build=* | --buil=* | --bui=* | --bu=*)
++ build_alias=$ac_optarg ;;
++
++ -cache-file | --cache-file | --cache-fil | --cache-fi \
++ | --cache-f | --cache- | --cache | --cach | --cac | --ca | --c)
++ ac_prev=cache_file ;;
++ -cache-file=* | --cache-file=* | --cache-fil=* | --cache-fi=* \
++ | --cache-f=* | --cache-=* | --cache=* | --cach=* | --cac=* | --ca=* | --c=*)
++ cache_file=$ac_optarg ;;
++
++ --config-cache | -C)
++ cache_file=config.cache ;;
++
++ -datadir | --datadir | --datadi | --datad)
++ ac_prev=datadir ;;
++ -datadir=* | --datadir=* | --datadi=* | --datad=*)
++ datadir=$ac_optarg ;;
++
++ -datarootdir | --datarootdir | --datarootdi | --datarootd | --dataroot \
++ | --dataroo | --dataro | --datar)
++ ac_prev=datarootdir ;;
++ -datarootdir=* | --datarootdir=* | --datarootdi=* | --datarootd=* \
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++ datarootdir=$ac_optarg ;;
++
++ -disable-* | --disable-*)
++ ac_useropt=`expr "x$ac_option" : 'x-*disable-\(.*\)'`
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++ as_fn_error "invalid feature name: $ac_useropt"
++ ac_useropt_orig=$ac_useropt
++ ac_useropt=`$as_echo "$ac_useropt" | sed 's/[-+.]/_/g'`
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++ *"
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++"*) ;;
++ *) ac_unrecognized_opts="$ac_unrecognized_opts$ac_unrecognized_sep--disable-$ac_useropt_orig"
++ ac_unrecognized_sep=', ';;
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++ -docdir | --docdir | --docdi | --doc | --do)
++ ac_prev=docdir ;;
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++ docdir=$ac_optarg ;;
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++ -dvidir | --dvidir | --dvidi | --dvid | --dvi | --dv)
++ ac_prev=dvidir ;;
++ -dvidir=* | --dvidir=* | --dvidi=* | --dvid=* | --dvi=* | --dv=*)
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++ -enable-* | --enable-*)
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++ as_fn_error "invalid feature name: $ac_useropt"
++ ac_useropt_orig=$ac_useropt
++ ac_useropt=`$as_echo "$ac_useropt" | sed 's/[-+.]/_/g'`
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++ *"
++"enable_$ac_useropt"
++"*) ;;
++ *) ac_unrecognized_opts="$ac_unrecognized_opts$ac_unrecognized_sep--enable-$ac_useropt_orig"
++ ac_unrecognized_sep=', ';;
++ esac
++ eval enable_$ac_useropt=\$ac_optarg ;;
++
++ -exec-prefix | --exec_prefix | --exec-prefix | --exec-prefi \
++ | --exec-pref | --exec-pre | --exec-pr | --exec-p | --exec- \
++ | --exec | --exe | --ex)
++ ac_prev=exec_prefix ;;
++ -exec-prefix=* | --exec_prefix=* | --exec-prefix=* | --exec-prefi=* \
++ | --exec-pref=* | --exec-pre=* | --exec-pr=* | --exec-p=* | --exec-=* \
++ | --exec=* | --exe=* | --ex=*)
++ exec_prefix=$ac_optarg ;;
++
++ -gas | --gas | --ga | --g)
++ # Obsolete; use --with-gas.
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++ -help | --help | --hel | --he | -h)
++ ac_init_help=long ;;
++ -help=r* | --help=r* | --hel=r* | --he=r* | -hr*)
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++ ac_init_help=short ;;
++
++ -host | --host | --hos | --ho)
++ ac_prev=host_alias ;;
++ -host=* | --host=* | --hos=* | --ho=*)
++ host_alias=$ac_optarg ;;
++
++ -htmldir | --htmldir | --htmldi | --htmld | --html | --htm | --ht)
++ ac_prev=htmldir ;;
++ -htmldir=* | --htmldir=* | --htmldi=* | --htmld=* | --html=* | --htm=* \
++ | --ht=*)
++ htmldir=$ac_optarg ;;
++
++ -includedir | --includedir | --includedi | --included | --include \
++ | --includ | --inclu | --incl | --inc)
++ ac_prev=includedir ;;
++ -includedir=* | --includedir=* | --includedi=* | --included=* | --include=* \
++ | --includ=* | --inclu=* | --incl=* | --inc=*)
++ includedir=$ac_optarg ;;
++
++ -infodir | --infodir | --infodi | --infod | --info | --inf)
++ ac_prev=infodir ;;
++ -infodir=* | --infodir=* | --infodi=* | --infod=* | --info=* | --inf=*)
++ infodir=$ac_optarg ;;
++
++ -libdir | --libdir | --libdi | --libd)
++ ac_prev=libdir ;;
++ -libdir=* | --libdir=* | --libdi=* | --libd=*)
++ libdir=$ac_optarg ;;
++
++ -libexecdir | --libexecdir | --libexecdi | --libexecd | --libexec \
++ | --libexe | --libex | --libe)
++ ac_prev=libexecdir ;;
++ -libexecdir=* | --libexecdir=* | --libexecdi=* | --libexecd=* | --libexec=* \
++ | --libexe=* | --libex=* | --libe=*)
++ libexecdir=$ac_optarg ;;
++
++ -localedir | --localedir | --localedi | --localed | --locale)
++ ac_prev=localedir ;;
++ -localedir=* | --localedir=* | --localedi=* | --localed=* | --locale=*)
++ localedir=$ac_optarg ;;
++
++ -localstatedir | --localstatedir | --localstatedi | --localstated \
++ | --localstate | --localstat | --localsta | --localst | --locals)
++ ac_prev=localstatedir ;;
++ -localstatedir=* | --localstatedir=* | --localstatedi=* | --localstated=* \
++ | --localstate=* | --localstat=* | --localsta=* | --localst=* | --locals=*)
++ localstatedir=$ac_optarg ;;
++
++ -mandir | --mandir | --mandi | --mand | --man | --ma | --m)
++ ac_prev=mandir ;;
++ -mandir=* | --mandir=* | --mandi=* | --mand=* | --man=* | --ma=* | --m=*)
++ mandir=$ac_optarg ;;
++
++ -nfp | --nfp | --nf)
++ # Obsolete; use --without-fp.
++ with_fp=no ;;
++
++ -no-create | --no-create | --no-creat | --no-crea | --no-cre \
++ | --no-cr | --no-c | -n)
++ no_create=yes ;;
++
++ -no-recursion | --no-recursion | --no-recursio | --no-recursi \
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++ no_recursion=yes ;;
++
++ -oldincludedir | --oldincludedir | --oldincludedi | --oldincluded \
++ | --oldinclude | --oldinclud | --oldinclu | --oldincl | --oldinc \
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++ ac_prev=oldincludedir ;;
++ -oldincludedir=* | --oldincludedir=* | --oldincludedi=* | --oldincluded=* \
++ | --oldinclude=* | --oldinclud=* | --oldinclu=* | --oldincl=* | --oldinc=* \
++ | --oldin=* | --oldi=* | --old=* | --ol=* | --o=*)
++ oldincludedir=$ac_optarg ;;
++
++ -prefix | --prefix | --prefi | --pref | --pre | --pr | --p)
++ ac_prev=prefix ;;
++ -prefix=* | --prefix=* | --prefi=* | --pref=* | --pre=* | --pr=* | --p=*)
++ prefix=$ac_optarg ;;
++
++ -program-prefix | --program-prefix | --program-prefi | --program-pref \
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++ ac_prev=program_prefix ;;
++ -program-prefix=* | --program-prefix=* | --program-prefi=* \
++ | --program-pref=* | --program-pre=* | --program-pr=* | --program-p=*)
++ program_prefix=$ac_optarg ;;
++
++ -program-suffix | --program-suffix | --program-suffi | --program-suff \
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++ ac_prev=program_suffix ;;
++ -program-suffix=* | --program-suffix=* | --program-suffi=* \
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++ program_suffix=$ac_optarg ;;
++
++ -program-transform-name | --program-transform-name \
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++ | --program-trans | --program-tran \
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++ ac_prev=program_transform_name ;;
++ -program-transform-name=* | --program-transform-name=* \
++ | --program-transform-nam=* | --program-transform-na=* \
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++ | --program-transform=* | --program-transfor=* \
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++ | --progr-tra=* | --program-tr=* | --program-t=*)
++ program_transform_name=$ac_optarg ;;
++
++ -pdfdir | --pdfdir | --pdfdi | --pdfd | --pdf | --pd)
++ ac_prev=pdfdir ;;
++ -pdfdir=* | --pdfdir=* | --pdfdi=* | --pdfd=* | --pdf=* | --pd=*)
++ pdfdir=$ac_optarg ;;
++
++ -psdir | --psdir | --psdi | --psd | --ps)
++ ac_prev=psdir ;;
++ -psdir=* | --psdir=* | --psdi=* | --psd=* | --ps=*)
++ psdir=$ac_optarg ;;
++
++ -q | -quiet | --quiet | --quie | --qui | --qu | --q \
++ | -silent | --silent | --silen | --sile | --sil)
++ silent=yes ;;
++
++ -sbindir | --sbindir | --sbindi | --sbind | --sbin | --sbi | --sb)
++ ac_prev=sbindir ;;
++ -sbindir=* | --sbindir=* | --sbindi=* | --sbind=* | --sbin=* \
++ | --sbi=* | --sb=*)
++ sbindir=$ac_optarg ;;
++
++ -sharedstatedir | --sharedstatedir | --sharedstatedi \
++ | --sharedstated | --sharedstate | --sharedstat | --sharedsta \
++ | --sharedst | --shareds | --shared | --share | --shar \
++ | --sha | --sh)
++ ac_prev=sharedstatedir ;;
++ -sharedstatedir=* | --sharedstatedir=* | --sharedstatedi=* \
++ | --sharedstated=* | --sharedstate=* | --sharedstat=* | --sharedsta=* \
++ | --sharedst=* | --shareds=* | --shared=* | --share=* | --shar=* \
++ | --sha=* | --sh=*)
++ sharedstatedir=$ac_optarg ;;
++
++ -site | --site | --sit)
++ ac_prev=site ;;
++ -site=* | --site=* | --sit=*)
++ site=$ac_optarg ;;
++
++ -srcdir | --srcdir | --srcdi | --srcd | --src | --sr)
++ ac_prev=srcdir ;;
++ -srcdir=* | --srcdir=* | --srcdi=* | --srcd=* | --src=* | --sr=*)
++ srcdir=$ac_optarg ;;
++
++ -sysconfdir | --sysconfdir | --sysconfdi | --sysconfd | --sysconf \
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++ ac_prev=sysconfdir ;;
++ -sysconfdir=* | --sysconfdir=* | --sysconfdi=* | --sysconfd=* | --sysconf=* \
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++ sysconfdir=$ac_optarg ;;
++
++ -target | --target | --targe | --targ | --tar | --ta | --t)
++ ac_prev=target_alias ;;
++ -target=* | --target=* | --targe=* | --targ=* | --tar=* | --ta=* | --t=*)
++ target_alias=$ac_optarg ;;
++
++ -v | -verbose | --verbose | --verbos | --verbo | --verb)
++ verbose=yes ;;
++
++ -version | --version | --versio | --versi | --vers | -V)
++ ac_init_version=: ;;
++
++ -with-* | --with-*)
++ ac_useropt=`expr "x$ac_option" : 'x-*with-\([^=]*\)'`
++ # Reject names that are not valid shell variable names.
++ expr "x$ac_useropt" : ".*[^-+._$as_cr_alnum]" >/dev/null &&
++ as_fn_error "invalid package name: $ac_useropt"
++ ac_useropt_orig=$ac_useropt
++ ac_useropt=`$as_echo "$ac_useropt" | sed 's/[-+.]/_/g'`
++ case $ac_user_opts in
++ *"
++"with_$ac_useropt"
++"*) ;;
++ *) ac_unrecognized_opts="$ac_unrecognized_opts$ac_unrecognized_sep--with-$ac_useropt_orig"
++ ac_unrecognized_sep=', ';;
++ esac
++ eval with_$ac_useropt=\$ac_optarg ;;
++
++ -without-* | --without-*)
++ ac_useropt=`expr "x$ac_option" : 'x-*without-\(.*\)'`
++ # Reject names that are not valid shell variable names.
++ expr "x$ac_useropt" : ".*[^-+._$as_cr_alnum]" >/dev/null &&
++ as_fn_error "invalid package name: $ac_useropt"
++ ac_useropt_orig=$ac_useropt
++ ac_useropt=`$as_echo "$ac_useropt" | sed 's/[-+.]/_/g'`
++ case $ac_user_opts in
++ *"
++"with_$ac_useropt"
++"*) ;;
++ *) ac_unrecognized_opts="$ac_unrecognized_opts$ac_unrecognized_sep--without-$ac_useropt_orig"
++ ac_unrecognized_sep=', ';;
++ esac
++ eval with_$ac_useropt=no ;;
++
++ --x)
++ # Obsolete; use --with-x.
++ with_x=yes ;;
++
++ -x-includes | --x-includes | --x-include | --x-includ | --x-inclu \
++ | --x-incl | --x-inc | --x-in | --x-i)
++ ac_prev=x_includes ;;
++ -x-includes=* | --x-includes=* | --x-include=* | --x-includ=* | --x-inclu=* \
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++ x_includes=$ac_optarg ;;
++
++ -x-libraries | --x-libraries | --x-librarie | --x-librari \
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++ ac_prev=x_libraries ;;
++ -x-libraries=* | --x-libraries=* | --x-librarie=* | --x-librari=* \
++ | --x-librar=* | --x-libra=* | --x-libr=* | --x-lib=* | --x-li=* | --x-l=*)
++ x_libraries=$ac_optarg ;;
++
++ -*) as_fn_error "unrecognized option: \`$ac_option'
++Try \`$0 --help' for more information."
++ ;;
++
++ *=*)
++ ac_envvar=`expr "x$ac_option" : 'x\([^=]*\)='`
++ # Reject names that are not valid shell variable names.
++ case $ac_envvar in #(
++ '' | [0-9]* | *[!_$as_cr_alnum]* )
++ as_fn_error "invalid variable name: \`$ac_envvar'" ;;
++ esac
++ eval $ac_envvar=\$ac_optarg
++ export $ac_envvar ;;
++
++ *)
++ # FIXME: should be removed in autoconf 3.0.
++ $as_echo "$as_me: WARNING: you should use --build, --host, --target" >&2
++ expr "x$ac_option" : ".*[^-._$as_cr_alnum]" >/dev/null &&
++ $as_echo "$as_me: WARNING: invalid host type: $ac_option" >&2
++ : ${build_alias=$ac_option} ${host_alias=$ac_option} ${target_alias=$ac_option}
++ ;;
++
++ esac
++done
++
++if test -n "$ac_prev"; then
++ ac_option=--`echo $ac_prev | sed 's/_/-/g'`
++ as_fn_error "missing argument to $ac_option"
++fi
++
++if test -n "$ac_unrecognized_opts"; then
++ case $enable_option_checking in
++ no) ;;
++ fatal) as_fn_error "unrecognized options: $ac_unrecognized_opts" ;;
++ *) $as_echo "$as_me: WARNING: unrecognized options: $ac_unrecognized_opts" >&2 ;;
++ esac
++fi
++
++# Check all directory arguments for consistency.
++for ac_var in exec_prefix prefix bindir sbindir libexecdir datarootdir \
++ datadir sysconfdir sharedstatedir localstatedir includedir \
++ oldincludedir docdir infodir htmldir dvidir pdfdir psdir \
++ libdir localedir mandir
++do
++ eval ac_val=\$$ac_var
++ # Remove trailing slashes.
++ case $ac_val in
++ */ )
++ ac_val=`expr "X$ac_val" : 'X\(.*[^/]\)' \| "X$ac_val" : 'X\(.*\)'`
++ eval $ac_var=\$ac_val;;
++ esac
++ # Be sure to have absolute directory names.
++ case $ac_val in
++ [\\/$]* | ?:[\\/]* ) continue;;
++ NONE | '' ) case $ac_var in *prefix ) continue;; esac;;
++ esac
++ as_fn_error "expected an absolute directory name for --$ac_var: $ac_val"
++done
++
++# There might be people who depend on the old broken behavior: `$host'
++# used to hold the argument of --host etc.
++# FIXME: To remove some day.
++build=$build_alias
++host=$host_alias
++target=$target_alias
++
++# FIXME: To remove some day.
++if test "x$host_alias" != x; then
++ if test "x$build_alias" = x; then
++ cross_compiling=maybe
++ $as_echo "$as_me: WARNING: If you wanted to set the --build type, don't use --host.
++ If a cross compiler is detected then cross compile mode will be used." >&2
++ elif test "x$build_alias" != "x$host_alias"; then
++ cross_compiling=yes
++ fi
++fi
++
++ac_tool_prefix=
++test -n "$host_alias" && ac_tool_prefix=$host_alias-
++
++test "$silent" = yes && exec 6>/dev/null
++
++
++ac_pwd=`pwd` && test -n "$ac_pwd" &&
++ac_ls_di=`ls -di .` &&
++ac_pwd_ls_di=`cd "$ac_pwd" && ls -di .` ||
++ as_fn_error "working directory cannot be determined"
++test "X$ac_ls_di" = "X$ac_pwd_ls_di" ||
++ as_fn_error "pwd does not report name of working directory"
++
++
++# Find the source files, if location was not specified.
++if test -z "$srcdir"; then
++ ac_srcdir_defaulted=yes
++ # Try the directory containing this script, then the parent directory.
++ ac_confdir=`$as_dirname -- "$as_myself" ||
++$as_expr X"$as_myself" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
++ X"$as_myself" : 'X\(//\)[^/]' \| \
++ X"$as_myself" : 'X\(//\)$' \| \
++ X"$as_myself" : 'X\(/\)' \| . 2>/dev/null ||
++$as_echo X"$as_myself" |
++ sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{
++ s//\1/
++ q
++ }
++ /^X\(\/\/\)[^/].*/{
++ s//\1/
++ q
++ }
++ /^X\(\/\/\)$/{
++ s//\1/
++ q
++ }
++ /^X\(\/\).*/{
++ s//\1/
++ q
++ }
++ s/.*/./; q'`
++ srcdir=$ac_confdir
++ if test ! -r "$srcdir/$ac_unique_file"; then
++ srcdir=..
++ fi
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++ ac_srcdir_defaulted=no
++fi
++if test ! -r "$srcdir/$ac_unique_file"; then
++ test "$ac_srcdir_defaulted" = yes && srcdir="$ac_confdir or .."
++ as_fn_error "cannot find sources ($ac_unique_file) in $srcdir"
++fi
++ac_msg="sources are in $srcdir, but \`cd $srcdir' does not work"
++ac_abs_confdir=`(
++ cd "$srcdir" && test -r "./$ac_unique_file" || as_fn_error "$ac_msg"
++ pwd)`
++# When building in place, set srcdir=.
++if test "$ac_abs_confdir" = "$ac_pwd"; then
++ srcdir=.
++fi
++# Remove unnecessary trailing slashes from srcdir.
++# Double slashes in file names in object file debugging info
++# mess up M-x gdb in Emacs.
++case $srcdir in
++*/) srcdir=`expr "X$srcdir" : 'X\(.*[^/]\)' \| "X$srcdir" : 'X\(.*\)'`;;
++esac
++for ac_var in $ac_precious_vars; do
++ eval ac_env_${ac_var}_set=\${${ac_var}+set}
++ eval ac_env_${ac_var}_value=\$${ac_var}
++ eval ac_cv_env_${ac_var}_set=\${${ac_var}+set}
++ eval ac_cv_env_${ac_var}_value=\$${ac_var}
++done
++
++#
++# Report the --help message.
++#
++if test "$ac_init_help" = "long"; then
++ # Omit some internal or obsolete options to make the list less imposing.
++ # This message is too long to be a string in the A/UX 3.1 sh.
++ cat <<_ACEOF
++\`configure' configures this package to adapt to many kinds of systems.
++
++Usage: $0 [OPTION]... [VAR=VALUE]...
++
++To assign environment variables (e.g., CC, CFLAGS...), specify them as
++VAR=VALUE. See below for descriptions of some of the useful variables.
++
++Defaults for the options are specified in brackets.
++
++Configuration:
++ -h, --help display this help and exit
++ --help=short display options specific to this package
++ --help=recursive display the short help of all the included packages
++ -V, --version display version information and exit
++ -q, --quiet, --silent do not print \`checking...' messages
++ --cache-file=FILE cache test results in FILE [disabled]
++ -C, --config-cache alias for \`--cache-file=config.cache'
++ -n, --no-create do not create output files
++ --srcdir=DIR find the sources in DIR [configure dir or \`..']
++
++Installation directories:
++ --prefix=PREFIX install architecture-independent files in PREFIX
++ @<:@@S|@ac_default_prefix@:>@
++ --exec-prefix=EPREFIX install architecture-dependent files in EPREFIX
++ @<:@PREFIX@:>@
++
++By default, \`make install' will install all the files in
++\`$ac_default_prefix/bin', \`$ac_default_prefix/lib' etc. You can specify
++an installation prefix other than \`$ac_default_prefix' using \`--prefix',
++for instance \`--prefix=\$HOME'.
++
++For better control, use the options below.
++
++Fine tuning of the installation directories:
++ --bindir=DIR user executables [EPREFIX/bin]
++ --sbindir=DIR system admin executables [EPREFIX/sbin]
++ --libexecdir=DIR program executables [EPREFIX/libexec]
++ --sysconfdir=DIR read-only single-machine data [PREFIX/etc]
++ --sharedstatedir=DIR modifiable architecture-independent data [PREFIX/com]
++ --localstatedir=DIR modifiable single-machine data [PREFIX/var]
++ --libdir=DIR object code libraries [EPREFIX/lib]
++ --includedir=DIR C header files [PREFIX/include]
++ --oldincludedir=DIR C header files for non-gcc [/usr/include]
++ --datarootdir=DIR read-only arch.-independent data root [PREFIX/share]
++ --datadir=DIR read-only architecture-independent data [DATAROOTDIR]
++ --infodir=DIR info documentation [DATAROOTDIR/info]
++ --localedir=DIR locale-dependent data [DATAROOTDIR/locale]
++ --mandir=DIR man documentation [DATAROOTDIR/man]
++ --docdir=DIR documentation root @<:@DATAROOTDIR/doc/PACKAGE@:>@
++ --htmldir=DIR html documentation [DOCDIR]
++ --dvidir=DIR dvi documentation [DOCDIR]
++ --pdfdir=DIR pdf documentation [DOCDIR]
++ --psdir=DIR ps documentation [DOCDIR]
++_ACEOF
++
++ cat <<\_ACEOF
++
++Program names:
++ --program-prefix=PREFIX prepend PREFIX to installed program names
++ --program-suffix=SUFFIX append SUFFIX to installed program names
++ --program-transform-name=PROGRAM run sed PROGRAM on installed program names
++
++X features:
++ --x-includes=DIR X include files are in DIR
++ --x-libraries=DIR X library files are in DIR
++
++System types:
++ --build=BUILD configure for building on BUILD [guessed]
++ --host=HOST cross-compile to build programs to run on HOST [BUILD]
++_ACEOF
++fi
++
++if test -n "$ac_init_help"; then
++
++ cat <<\_ACEOF
++
++Optional Features:
++ --disable-option-checking ignore unrecognized --enable/--with options
++ --disable-FEATURE do not include FEATURE (same as --enable-FEATURE=no)
++ --enable-FEATURE[=ARG] include FEATURE [ARG=yes]
++ --enable-shared@<:@=PKGS@:>@ build shared libraries @<:@default=yes@:>@
++ --enable-static@<:@=PKGS@:>@ build static libraries @<:@default=yes@:>@
++ --enable-fast-install@<:@=PKGS@:>@
++ optimize for fast installation @<:@default=yes@:>@
++ --disable-dependency-tracking speeds up one-time build
++ --enable-dependency-tracking do not reject slow dependency extractors
++ --disable-libtool-lock avoid locking (might break parallel builds)
++ --enable-64 64 bit pointers
++ --enable-debug debug (-g option on compiler)
++ --enable-large over 2Gb file support (default)
++ --enable-systemlibs utility for RPM/dpkg bundles
++ --enable-purify purify
++ --enable-warnings warnings (-Wall option on gcc compiler)
++ --enable-devwarnings strict warnings (gcc compiler only) for developers
++ --enable-devextrawarnings
++ add extra warnings to devwarnings
++ --enable-mprobe mprobe memory allocation test
++ --enable-savestats save statistics and print with debug output
++
++Optional Packages:
++ --with-PACKAGE[=ARG] use PACKAGE [ARG=yes]
++ --without-PACKAGE do not use PACKAGE (same as --with-PACKAGE=no)
++ --with-pic try to use only PIC/non-PIC objects @<:@default=use
++ both@:>@
++ --with-gnu-ld assume the C compiler uses GNU ld @<:@default=no@:>@
++ --with-sgiabi=@<:@ARG@:>@ SGI compiler flags @<:@default=no@:>@
++ --with-x use the X Window System
++ --with-docroot=DIR root directory path of documentation (defaults to
++ none)
++ --with-gccprofile selects profiling
++ --with-java=DIR root directory path of java installation
++ --without-java to disable java
++ --with-javaos=DIR root directory path of java installation include OS
++ --with-hpdf=DIR root directory path of hpdf installation @<:@defaults
++ to /usr@:>@
++ --without-hpdf to disable pdf support
++ --with-pngdriver=@<:@DIR@:>@ root directory path of png/gd/zlib installation
++ (defaults to /usr)
++ --without-pngdriver to disable pngdriver usage completely
++ --with-auth=@<:@AUTHTYPE@:>@ defaults to PAM
++ --with-mysql=@<:@ARG@:>@ use MySQL client library @<:@default=yes@:>@, optionally
++ specify path to mysql_config
++ --with-postgresql=@<:@ARG@:>@ use PostgreSQL library @<:@default=yes@:>@, optionally
++ specify path to pg_config
++ --with-thread=@<:@TYPE@:>@ thread type @<:@default=linux@:>@
++
++Some influential environment variables:
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++ LDFLAGS linker flags, e.g. -L<lib dir> if you have libraries in a
++ nonstandard directory <lib dir>
++ LIBS libraries to pass to the linker, e.g. -l<library>
++ CPPFLAGS (Objective) C/C++ preprocessor flags, e.g. -I<include dir> if
++ you have headers in a nonstandard directory <include dir>
++ CPP C preprocessor
++ XMKMF Path to xmkmf, Makefile generator for X Window System
++
++Use these variables to override the choices made by `configure' or to help
++it to find libraries and programs with nonstandard names/locations.
++
++Report bugs to the package provider.
++_ACEOF
++ac_status=$?
++fi
++
++if test "$ac_init_help" = "recursive"; then
++ # If there are subdirs, report their specific --help.
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++ac_abs_srcdir=$ac_abs_top_srcdir$ac_dir_suffix
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++ cd "$ac_dir" || { ac_status=$?; continue; }
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++ echo &&
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++if $ac_init_version; then
++ cat <<\_ACEOF
++configure
++generated by GNU Autoconf 2.65
++
++Copyright (C) 2009 Free Software Foundation, Inc.
++This configure script is free software; the Free Software Foundation
++gives unlimited permission to copy, distribute and modify it.
++_ACEOF
++ exit
++fi
++
++## ------------------------ ##
++## Autoconf initialization. ##
++## ------------------------ ##
++
++@%:@ ac_fn_c_try_compile LINENO
++@%:@ --------------------------
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++{
++ as_lineno=${as_lineno-"$1"} as_lineno_stack=as_lineno_stack=$as_lineno_stack
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++ if { { ac_try="$ac_compile"
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++eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
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++ (eval "$ac_compile") 2>conftest.err
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++
++@%:@ ac_fn_c_try_link LINENO
++@%:@ -----------------------
++@%:@ Try to link conftest. at S|@ac_ext, and return whether this succeeded.
++ac_fn_c_try_link ()
++{
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++ rm -f conftest.$ac_objext conftest$ac_exeext
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++case "(($ac_try" in
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++ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
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++ $as_echo "$as_me: failed program was:" >&5
++sed 's/^/| /' conftest.$ac_ext >&5
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++ # interfere with the next link command; also delete a directory that is
++ # left behind by Apple's compiler. We do this before executing the actions.
++ rm -rf conftest.dSYM conftest_ipa8_conftest.oo
++ eval $as_lineno_stack; test "x$as_lineno_stack" = x && { as_lineno=; unset as_lineno;}
++ as_fn_set_status $ac_retval
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++} @%:@ ac_fn_c_try_link
++
++@%:@ ac_fn_c_check_header_compile LINENO HEADER VAR INCLUDES
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++ac_fn_c_check_header_compile ()
++{
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++/* end confdefs.h. */
++$4
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++if ac_fn_c_try_compile "$LINENO"; then :
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++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_res" >&5
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++@%:@ ac_fn_c_try_cpp LINENO
++@%:@ ----------------------
++@%:@ Try to preprocess conftest. at S|@ac_ext, and return whether this succeeded.
++ac_fn_c_try_cpp ()
++{
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++ if { { ac_try="$ac_cpp conftest.$ac_ext"
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++ *) ac_try_echo=$ac_try;;
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++$as_echo "$ac_try_echo"; } >&5
++ (eval "$ac_cpp conftest.$ac_ext") 2>conftest.err
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++ cat conftest.er1 >&5
++ mv -f conftest.er1 conftest.err
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++ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
++ test $ac_status = 0; } >/dev/null && {
++ test -z "$ac_c_preproc_warn_flag$ac_c_werror_flag" ||
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++sed 's/^/| /' conftest.$ac_ext >&5
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++
++} @%:@ ac_fn_c_try_cpp
++
++@%:@ ac_fn_c_try_run LINENO
++@%:@ ----------------------
++@%:@ Try to link conftest. at S|@ac_ext, and return whether this succeeded. Assumes
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++ac_fn_c_try_run ()
++{
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++case "(($ac_try" in
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++ *) ac_try_echo=$ac_try;;
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++eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
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++ { { case "(($ac_try" in
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++eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
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++ (eval "$ac_try") 2>&5
++ ac_status=$?
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++sed 's/^/| /' conftest.$ac_ext >&5
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++
++} @%:@ ac_fn_c_try_run
++
++@%:@ ac_fn_c_check_func LINENO FUNC VAR
++@%:@ ----------------------------------
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++ac_fn_c_check_func ()
++{
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++/* end confdefs.h. */
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++
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++
++#ifdef __STDC__
++# include <limits.h>
++#else
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++#endif
++
++#undef $2
++
++/* Override any GCC internal prototype to avoid an error.
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++extern "C"
++#endif
++char $2 ();
++/* The GNU C library defines this for functions which it implements
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++int
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++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_res" >&5
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++@%:@ ac_fn_c_check_header_mongrel LINENO HEADER VAR INCLUDES
++@%:@ -------------------------------------------------------
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++ac_fn_c_check_header_mongrel ()
++{
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++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_res" >&5
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++/* end confdefs.h. */
++$4
++@%:@include <$2>
++_ACEOF
++if ac_fn_c_try_compile "$LINENO"; then :
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++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_header_compiler" >&5
++$as_echo "$ac_header_compiler" >&6; }
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++@%:@include <$2>
++_ACEOF
++if ac_fn_c_try_cpp "$LINENO"; then :
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++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_header_preproc" >&5
++$as_echo "$ac_header_preproc" >&6; }
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++ { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $2: present but cannot be compiled" >&5
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++ { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $2: see the Autoconf documentation" >&5
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++} @%:@ ac_fn_c_check_header_mongrel
++
++@%:@ ac_fn_c_check_type LINENO TYPE VAR INCLUDES
++@%:@ -------------------------------------------
++@%:@ Tests whether TYPE exists after having included INCLUDES, setting cache
++@%:@ variable VAR accordingly.
++ac_fn_c_check_type ()
++{
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++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for $2" >&5
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++if { as_var=$3; eval "test \"\${$as_var+set}\" = set"; }; then :
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++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++$4
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++{
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++ return 0;
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++_ACEOF
++if ac_fn_c_try_compile "$LINENO"; then :
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++$4
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++{
++if (sizeof (($2)))
++ return 0;
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++_ACEOF
++if ac_fn_c_try_compile "$LINENO"; then :
++
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++ eval "$3=yes"
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++rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
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++eval ac_res=\$$3
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_res" >&5
++$as_echo "$ac_res" >&6; }
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++cat >config.log <<_ACEOF
++This file contains any messages produced by compilers while
++running configure, to aid debugging if configure makes a mistake.
++
++It was created by $as_me, which was
++generated by GNU Autoconf 2.65. Invocation command line was
++
++ $ $0 $@
++
++_ACEOF
++exec 5>>config.log
++{
++cat <<_ASUNAME
++## --------- ##
++## Platform. ##
++## --------- ##
++
++hostname = `(hostname || uname -n) 2>/dev/null | sed 1q`
++uname -m = `(uname -m) 2>/dev/null || echo unknown`
++uname -r = `(uname -r) 2>/dev/null || echo unknown`
++uname -s = `(uname -s) 2>/dev/null || echo unknown`
++uname -v = `(uname -v) 2>/dev/null || echo unknown`
++
++/usr/bin/uname -p = `(/usr/bin/uname -p) 2>/dev/null || echo unknown`
++/bin/uname -X = `(/bin/uname -X) 2>/dev/null || echo unknown`
++
++/bin/arch = `(/bin/arch) 2>/dev/null || echo unknown`
++/usr/bin/arch -k = `(/usr/bin/arch -k) 2>/dev/null || echo unknown`
++/usr/convex/getsysinfo = `(/usr/convex/getsysinfo) 2>/dev/null || echo unknown`
++/usr/bin/hostinfo = `(/usr/bin/hostinfo) 2>/dev/null || echo unknown`
++/bin/machine = `(/bin/machine) 2>/dev/null || echo unknown`
++/usr/bin/oslevel = `(/usr/bin/oslevel) 2>/dev/null || echo unknown`
++/bin/universe = `(/bin/universe) 2>/dev/null || echo unknown`
++
++_ASUNAME
++
++as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ $as_echo "PATH: $as_dir"
++ done
++IFS=$as_save_IFS
++
++} >&5
++
++cat >&5 <<_ACEOF
++
++
++## ----------- ##
++## Core tests. ##
++## ----------- ##
++
++_ACEOF
++
++
++# Keep a trace of the command line.
++# Strip out --no-create and --no-recursion so they do not pile up.
++# Strip out --silent because we don't want to record it for future runs.
++# Also quote any args containing shell meta-characters.
++# Make two passes to allow for proper duplicate-argument suppression.
++ac_configure_args=
++ac_configure_args0=
++ac_configure_args1=
++ac_must_keep_next=false
++for ac_pass in 1 2
++do
++ for ac_arg
++ do
++ case $ac_arg in
++ -no-create | --no-c* | -n | -no-recursion | --no-r*) continue ;;
++ -q | -quiet | --quiet | --quie | --qui | --qu | --q \
++ | -silent | --silent | --silen | --sile | --sil)
++ continue ;;
++ *\'*)
++ ac_arg=`$as_echo "$ac_arg" | sed "s/'/'\\\\\\\\''/g"` ;;
++ esac
++ case $ac_pass in
++ 1) as_fn_append ac_configure_args0 " '$ac_arg'" ;;
++ 2)
++ as_fn_append ac_configure_args1 " '$ac_arg'"
++ if test $ac_must_keep_next = true; then
++ ac_must_keep_next=false # Got value, back to normal.
++ else
++ case $ac_arg in
++ *=* | --config-cache | -C | -disable-* | --disable-* \
++ | -enable-* | --enable-* | -gas | --g* | -nfp | --nf* \
++ | -q | -quiet | --q* | -silent | --sil* | -v | -verb* \
++ | -with-* | --with-* | -without-* | --without-* | --x)
++ case "$ac_configure_args0 " in
++ "$ac_configure_args1"*" '$ac_arg' "* ) continue ;;
++ esac
++ ;;
++ -* ) ac_must_keep_next=true ;;
++ esac
++ fi
++ as_fn_append ac_configure_args " '$ac_arg'"
++ ;;
++ esac
++ done
++done
++{ ac_configure_args0=; unset ac_configure_args0;}
++{ ac_configure_args1=; unset ac_configure_args1;}
++
++# When interrupted or exit'd, cleanup temporary files, and complete
++# config.log. We remove comments because anyway the quotes in there
++# would cause problems or look ugly.
++# WARNING: Use '\'' to represent an apostrophe within the trap.
++# WARNING: Do not start the trap code with a newline, due to a FreeBSD 4.0 bug.
++trap 'exit_status=$?
++ # Save into config.log some information that might help in debugging.
++ {
++ echo
++
++ cat <<\_ASBOX
++## ---------------- ##
++## Cache variables. ##
++## ---------------- ##
++_ASBOX
++ echo
++ # The following way of writing the cache mishandles newlines in values,
++(
++ for ac_var in `(set) 2>&1 | sed -n '\''s/^\([a-zA-Z_][a-zA-Z0-9_]*\)=.*/\1/p'\''`; do
++ eval ac_val=\$$ac_var
++ case $ac_val in #(
++ *${as_nl}*)
++ case $ac_var in #(
++ *_cv_*) { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: cache variable $ac_var contains a newline" >&5
++$as_echo "$as_me: WARNING: cache variable $ac_var contains a newline" >&2;} ;;
++ esac
++ case $ac_var in #(
++ _ | IFS | as_nl) ;; #(
++ BASH_ARGV | BASH_SOURCE) eval $ac_var= ;; #(
++ *) { eval $ac_var=; unset $ac_var;} ;;
++ esac ;;
++ esac
++ done
++ (set) 2>&1 |
++ case $as_nl`(ac_space='\'' '\''; set) 2>&1` in #(
++ *${as_nl}ac_space=\ *)
++ sed -n \
++ "s/'\''/'\''\\\\'\'''\''/g;
++ s/^\\([_$as_cr_alnum]*_cv_[_$as_cr_alnum]*\\)=\\(.*\\)/\\1='\''\\2'\''/p"
++ ;; #(
++ *)
++ sed -n "/^[_$as_cr_alnum]*_cv_[_$as_cr_alnum]*=/p"
++ ;;
++ esac |
++ sort
++)
++ echo
++
++ cat <<\_ASBOX
++## ----------------- ##
++## Output variables. ##
++## ----------------- ##
++_ASBOX
++ echo
++ for ac_var in $ac_subst_vars
++ do
++ eval ac_val=\$$ac_var
++ case $ac_val in
++ *\'\''*) ac_val=`$as_echo "$ac_val" | sed "s/'\''/'\''\\\\\\\\'\'''\''/g"`;;
++ esac
++ $as_echo "$ac_var='\''$ac_val'\''"
++ done | sort
++ echo
++
++ if test -n "$ac_subst_files"; then
++ cat <<\_ASBOX
++## ------------------- ##
++## File substitutions. ##
++## ------------------- ##
++_ASBOX
++ echo
++ for ac_var in $ac_subst_files
++ do
++ eval ac_val=\$$ac_var
++ case $ac_val in
++ *\'\''*) ac_val=`$as_echo "$ac_val" | sed "s/'\''/'\''\\\\\\\\'\'''\''/g"`;;
++ esac
++ $as_echo "$ac_var='\''$ac_val'\''"
++ done | sort
++ echo
++ fi
++
++ if test -s confdefs.h; then
++ cat <<\_ASBOX
++## ----------- ##
++## confdefs.h. ##
++## ----------- ##
++_ASBOX
++ echo
++ cat confdefs.h
++ echo
++ fi
++ test "$ac_signal" != 0 &&
++ $as_echo "$as_me: caught signal $ac_signal"
++ $as_echo "$as_me: exit $exit_status"
++ } >&5
++ rm -f core *.core core.conftest.* &&
++ rm -f -r conftest* confdefs* conf$$* $ac_clean_files &&
++ exit $exit_status
++' 0
++for ac_signal in 1 2 13 15; do
++ trap 'ac_signal='$ac_signal'; as_fn_exit 1' $ac_signal
++done
++ac_signal=0
++
++# confdefs.h avoids OS command line length limits that DEFS can exceed.
++rm -f -r conftest* confdefs.h
++
++$as_echo "/* confdefs.h */" > confdefs.h
++
++# Predefined preprocessor variables.
++
++cat >>confdefs.h <<_ACEOF
++@%:@define PACKAGE_NAME "$PACKAGE_NAME"
++_ACEOF
++
++cat >>confdefs.h <<_ACEOF
++@%:@define PACKAGE_TARNAME "$PACKAGE_TARNAME"
++_ACEOF
++
++cat >>confdefs.h <<_ACEOF
++@%:@define PACKAGE_VERSION "$PACKAGE_VERSION"
++_ACEOF
++
++cat >>confdefs.h <<_ACEOF
++@%:@define PACKAGE_STRING "$PACKAGE_STRING"
++_ACEOF
++
++cat >>confdefs.h <<_ACEOF
++@%:@define PACKAGE_BUGREPORT "$PACKAGE_BUGREPORT"
++_ACEOF
++
++cat >>confdefs.h <<_ACEOF
++@%:@define PACKAGE_URL "$PACKAGE_URL"
++_ACEOF
++
++
++# Let the site file select an alternate cache file if it wants to.
++# Prefer an explicitly selected file to automatically selected ones.
++ac_site_file1=NONE
++ac_site_file2=NONE
++if test -n "$CONFIG_SITE"; then
++ ac_site_file1=$CONFIG_SITE
++elif test "x$prefix" != xNONE; then
++ ac_site_file1=$prefix/share/config.site
++ ac_site_file2=$prefix/etc/config.site
++else
++ ac_site_file1=$ac_default_prefix/share/config.site
++ ac_site_file2=$ac_default_prefix/etc/config.site
++fi
++for ac_site_file in "$ac_site_file1" "$ac_site_file2"
++do
++ test "x$ac_site_file" = xNONE && continue
++ if test /dev/null != "$ac_site_file" && test -r "$ac_site_file"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: loading site script $ac_site_file" >&5
++$as_echo "$as_me: loading site script $ac_site_file" >&6;}
++ sed 's/^/| /' "$ac_site_file" >&5
++ . "$ac_site_file"
++ fi
++done
++
++if test -r "$cache_file"; then
++ # Some versions of bash will fail to source /dev/null (special files
++ # actually), so we avoid doing that. DJGPP emulates it as a regular file.
++ if test /dev/null != "$cache_file" && test -f "$cache_file"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: loading cache $cache_file" >&5
++$as_echo "$as_me: loading cache $cache_file" >&6;}
++ case $cache_file in
++ [\\/]* | ?:[\\/]* ) . "$cache_file";;
++ *) . "./$cache_file";;
++ esac
++ fi
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: creating cache $cache_file" >&5
++$as_echo "$as_me: creating cache $cache_file" >&6;}
++ >$cache_file
++fi
++
++# Check that the precious variables saved in the cache have kept the same
++# value.
++ac_cache_corrupted=false
++for ac_var in $ac_precious_vars; do
++ eval ac_old_set=\$ac_cv_env_${ac_var}_set
++ eval ac_new_set=\$ac_env_${ac_var}_set
++ eval ac_old_val=\$ac_cv_env_${ac_var}_value
++ eval ac_new_val=\$ac_env_${ac_var}_value
++ case $ac_old_set,$ac_new_set in
++ set,)
++ { $as_echo "$as_me:${as_lineno-$LINENO}: error: \`$ac_var' was set to \`$ac_old_val' in the previous run" >&5
++$as_echo "$as_me: error: \`$ac_var' was set to \`$ac_old_val' in the previous run" >&2;}
++ ac_cache_corrupted=: ;;
++ ,set)
++ { $as_echo "$as_me:${as_lineno-$LINENO}: error: \`$ac_var' was not set in the previous run" >&5
++$as_echo "$as_me: error: \`$ac_var' was not set in the previous run" >&2;}
++ ac_cache_corrupted=: ;;
++ ,);;
++ *)
++ if test "x$ac_old_val" != "x$ac_new_val"; then
++ # differences in whitespace do not lead to failure.
++ ac_old_val_w=`echo x $ac_old_val`
++ ac_new_val_w=`echo x $ac_new_val`
++ if test "$ac_old_val_w" != "$ac_new_val_w"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: error: \`$ac_var' has changed since the previous run:" >&5
++$as_echo "$as_me: error: \`$ac_var' has changed since the previous run:" >&2;}
++ ac_cache_corrupted=:
++ else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: warning: ignoring whitespace changes in \`$ac_var' since the previous run:" >&5
++$as_echo "$as_me: warning: ignoring whitespace changes in \`$ac_var' since the previous run:" >&2;}
++ eval $ac_var=\$ac_old_val
++ fi
++ { $as_echo "$as_me:${as_lineno-$LINENO}: former value: \`$ac_old_val'" >&5
++$as_echo "$as_me: former value: \`$ac_old_val'" >&2;}
++ { $as_echo "$as_me:${as_lineno-$LINENO}: current value: \`$ac_new_val'" >&5
++$as_echo "$as_me: current value: \`$ac_new_val'" >&2;}
++ fi;;
++ esac
++ # Pass precious variables to config.status.
++ if test "$ac_new_set" = set; then
++ case $ac_new_val in
++ *\'*) ac_arg=$ac_var=`$as_echo "$ac_new_val" | sed "s/'/'\\\\\\\\''/g"` ;;
++ *) ac_arg=$ac_var=$ac_new_val ;;
++ esac
++ case " $ac_configure_args " in
++ *" '$ac_arg' "*) ;; # Avoid dups. Use of quotes ensures accuracy.
++ *) as_fn_append ac_configure_args " '$ac_arg'" ;;
++ esac
++ fi
++done
++if $ac_cache_corrupted; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
++$as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
++ { $as_echo "$as_me:${as_lineno-$LINENO}: error: changes in the environment can compromise the build" >&5
++$as_echo "$as_me: error: changes in the environment can compromise the build" >&2;}
++ as_fn_error "run \`make distclean' and/or \`rm $cache_file' and start over" "$LINENO" 5
++fi
++## -------------------- ##
++## Main body of script. ##
++## -------------------- ##
++
++ac_ext=c
++ac_cpp='$CPP $CPPFLAGS'
++ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5'
++ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
++ac_compiler_gnu=$ac_cv_c_compiler_gnu
++
++
++am__api_version='1.11'
++
++ac_aux_dir=
++for ac_dir in "$srcdir" "$srcdir/.." "$srcdir/../.."; do
++ for ac_t in install-sh install.sh shtool; do
++ if test -f "$ac_dir/$ac_t"; then
++ ac_aux_dir=$ac_dir
++ ac_install_sh="$ac_aux_dir/$ac_t -c"
++ break 2
++ fi
++ done
++done
++if test -z "$ac_aux_dir"; then
++ as_fn_error "cannot find install-sh, install.sh, or shtool in \"$srcdir\" \"$srcdir/..\" \"$srcdir/../..\"" "$LINENO" 5
++fi
++
++# These three variables are undocumented and unsupported,
++# and are intended to be withdrawn in a future Autoconf release.
++# They can cause serious problems if a builder's source tree is in a directory
++# whose full name contains unusual characters.
++ac_config_guess="$SHELL $ac_aux_dir/config.guess" # Please don't use this var.
++ac_config_sub="$SHELL $ac_aux_dir/config.sub" # Please don't use this var.
++ac_configure="$SHELL $ac_aux_dir/configure" # Please don't use this var.
++
++
++# Find a good install program. We prefer a C program (faster),
++# so one script is as good as another. But avoid the broken or
++# incompatible versions:
++# SysV /etc/install, /usr/sbin/install
++# SunOS /usr/etc/install
++# IRIX /sbin/install
++# AIX /bin/install
++# AmigaOS /C/install, which installs bootblocks on floppy discs
++# AIX 4 /usr/bin/installbsd, which doesn't work without a -g flag
++# AFS /usr/afsws/bin/install, which mishandles nonexistent args
++# SVR4 /usr/ucb/install, which tries to use the nonexistent group "staff"
++# OS/2's system install, which has a completely different semantic
++# ./install, which can be erroneously created by make from ./install.sh.
++# Reject install programs that cannot install multiple files.
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for a BSD-compatible install" >&5
++$as_echo_n "checking for a BSD-compatible install... " >&6; }
++if test -z "$INSTALL"; then
++if test "${ac_cv_path_install+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ # Account for people who put trailing slashes in PATH elements.
++case $as_dir/ in @%:@((
++ ./ | .// | /[cC]/* | \
++ /etc/* | /usr/sbin/* | /usr/etc/* | /sbin/* | /usr/afsws/bin/* | \
++ ?:[\\/]os2[\\/]install[\\/]* | ?:[\\/]OS2[\\/]INSTALL[\\/]* | \
++ /usr/ucb/* ) ;;
++ *)
++ # OSF1 and SCO ODT 3.0 have their own names for install.
++ # Don't use installbsd from OSF since it installs stuff as root
++ # by default.
++ for ac_prog in ginstall scoinst install; do
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ if { test -f "$as_dir/$ac_prog$ac_exec_ext" && $as_test_x "$as_dir/$ac_prog$ac_exec_ext"; }; then
++ if test $ac_prog = install &&
++ grep dspmsg "$as_dir/$ac_prog$ac_exec_ext" >/dev/null 2>&1; then
++ # AIX install. It has an incompatible calling convention.
++ :
++ elif test $ac_prog = install &&
++ grep pwplus "$as_dir/$ac_prog$ac_exec_ext" >/dev/null 2>&1; then
++ # program-specific install script used by HP pwplus--don't use.
++ :
++ else
++ rm -rf conftest.one conftest.two conftest.dir
++ echo one > conftest.one
++ echo two > conftest.two
++ mkdir conftest.dir
++ if "$as_dir/$ac_prog$ac_exec_ext" -c conftest.one conftest.two "`pwd`/conftest.dir" &&
++ test -s conftest.one && test -s conftest.two &&
++ test -s conftest.dir/conftest.one &&
++ test -s conftest.dir/conftest.two
++ then
++ ac_cv_path_install="$as_dir/$ac_prog$ac_exec_ext -c"
++ break 3
++ fi
++ fi
++ fi
++ done
++ done
++ ;;
++esac
++
++ done
++IFS=$as_save_IFS
++
++rm -rf conftest.one conftest.two conftest.dir
++
++fi
++ if test "${ac_cv_path_install+set}" = set; then
++ INSTALL=$ac_cv_path_install
++ else
++ # As a last resort, use the slow shell script. Don't cache a
++ # value for INSTALL within a source directory, because that will
++ # break other packages using the cache if that directory is
++ # removed, or if the value is a relative name.
++ INSTALL=$ac_install_sh
++ fi
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $INSTALL" >&5
++$as_echo "$INSTALL" >&6; }
++
++# Use test -z because SunOS4 sh mishandles braces in ${var-val}.
++# It thinks the first close brace ends the variable substitution.
++test -z "$INSTALL_PROGRAM" && INSTALL_PROGRAM='${INSTALL}'
++
++test -z "$INSTALL_SCRIPT" && INSTALL_SCRIPT='${INSTALL}'
++
++test -z "$INSTALL_DATA" && INSTALL_DATA='${INSTALL} -m 644'
++
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking whether build environment is sane" >&5
++$as_echo_n "checking whether build environment is sane... " >&6; }
++# Just in case
++sleep 1
++echo timestamp > conftest.file
++# Reject unsafe characters in $srcdir or the absolute working directory
++# name. Accept space and tab only in the latter.
++am_lf='
++'
++case `pwd` in
++ *[\\\"\#\$\&\'\`$am_lf]*)
++ as_fn_error "unsafe absolute working directory name" "$LINENO" 5;;
++esac
++case $srcdir in
++ *[\\\"\#\$\&\'\`$am_lf\ \ ]*)
++ as_fn_error "unsafe srcdir value: \`$srcdir'" "$LINENO" 5;;
++esac
++
++# Do `set' in a subshell so we don't clobber the current shell's
++# arguments. Must try -L first in case configure is actually a
++# symlink; some systems play weird games with the mod time of symlinks
++# (eg FreeBSD returns the mod time of the symlink's containing
++# directory).
++if (
++ set X `ls -Lt "$srcdir/configure" conftest.file 2> /dev/null`
++ if test "$*" = "X"; then
++ # -L didn't work.
++ set X `ls -t "$srcdir/configure" conftest.file`
++ fi
++ rm -f conftest.file
++ if test "$*" != "X $srcdir/configure conftest.file" \
++ && test "$*" != "X conftest.file $srcdir/configure"; then
++
++ # If neither matched, then we have a broken ls. This can happen
++ # if, for instance, CONFIG_SHELL is bash and it inherits a
++ # broken ls alias from the environment. This has actually
++ # happened. Such a system could not be considered "sane".
++ as_fn_error "ls -t appears to fail. Make sure there is not a broken
++alias in your environment" "$LINENO" 5
++ fi
++
++ test "$2" = conftest.file
++ )
++then
++ # Ok.
++ :
++else
++ as_fn_error "newly created file is older than distributed files!
++Check your system clock" "$LINENO" 5
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
++$as_echo "yes" >&6; }
++test "$program_prefix" != NONE &&
++ program_transform_name="s&^&$program_prefix&;$program_transform_name"
++# Use a double $ so make ignores it.
++test "$program_suffix" != NONE &&
++ program_transform_name="s&\$&$program_suffix&;$program_transform_name"
++# Double any \ or $.
++# By default was `s,x,x', remove it if useless.
++ac_script='s/[\\$]/&&/g;s/;s,x,x,$//'
++program_transform_name=`$as_echo "$program_transform_name" | sed "$ac_script"`
++
++# expand $ac_aux_dir to an absolute path
++am_aux_dir=`cd $ac_aux_dir && pwd`
++
++if test x"${MISSING+set}" != xset; then
++ case $am_aux_dir in
++ *\ * | *\ *)
++ MISSING="\${SHELL} \"$am_aux_dir/missing\"" ;;
++ *)
++ MISSING="\${SHELL} $am_aux_dir/missing" ;;
++ esac
++fi
++# Use eval to expand $SHELL
++if eval "$MISSING --run true"; then
++ am_missing_run="$MISSING --run "
++else
++ am_missing_run=
++ { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: \`missing' script is too old or missing" >&5
++$as_echo "$as_me: WARNING: \`missing' script is too old or missing" >&2;}
++fi
++
++if test x"${install_sh}" != xset; then
++ case $am_aux_dir in
++ *\ * | *\ *)
++ install_sh="\${SHELL} '$am_aux_dir/install-sh'" ;;
++ *)
++ install_sh="\${SHELL} $am_aux_dir/install-sh"
++ esac
++fi
++
++# Installed binaries are usually stripped using `strip' when the user
++# run `make install-strip'. However `strip' might not be the right
++# tool to use in cross-compilation environments, therefore Automake
++# will honor the `STRIP' environment variable to overrule this program.
++if test "$cross_compiling" != no; then
++ if test -n "$ac_tool_prefix"; then
++ # Extract the first word of "${ac_tool_prefix}strip", so it can be a program name with args.
++set dummy ${ac_tool_prefix}strip; ac_word=$2
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
++$as_echo_n "checking for $ac_word... " >&6; }
++if test "${ac_cv_prog_STRIP+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test -n "$STRIP"; then
++ ac_cv_prog_STRIP="$STRIP" # Let the user override the test.
++else
++as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
++ ac_cv_prog_STRIP="${ac_tool_prefix}strip"
++ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
++ break 2
++ fi
++done
++ done
++IFS=$as_save_IFS
++
++fi
++fi
++STRIP=$ac_cv_prog_STRIP
++if test -n "$STRIP"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $STRIP" >&5
++$as_echo "$STRIP" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++
++fi
++if test -z "$ac_cv_prog_STRIP"; then
++ ac_ct_STRIP=$STRIP
++ # Extract the first word of "strip", so it can be a program name with args.
++set dummy strip; ac_word=$2
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
++$as_echo_n "checking for $ac_word... " >&6; }
++if test "${ac_cv_prog_ac_ct_STRIP+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test -n "$ac_ct_STRIP"; then
++ ac_cv_prog_ac_ct_STRIP="$ac_ct_STRIP" # Let the user override the test.
++else
++as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
++ ac_cv_prog_ac_ct_STRIP="strip"
++ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
++ break 2
++ fi
++done
++ done
++IFS=$as_save_IFS
++
++fi
++fi
++ac_ct_STRIP=$ac_cv_prog_ac_ct_STRIP
++if test -n "$ac_ct_STRIP"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_ct_STRIP" >&5
++$as_echo "$ac_ct_STRIP" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++ if test "x$ac_ct_STRIP" = x; then
++ STRIP=":"
++ else
++ case $cross_compiling:$ac_tool_warned in
++yes:)
++{ $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: using cross tools not prefixed with host triplet" >&5
++$as_echo "$as_me: WARNING: using cross tools not prefixed with host triplet" >&2;}
++ac_tool_warned=yes ;;
++esac
++ STRIP=$ac_ct_STRIP
++ fi
++else
++ STRIP="$ac_cv_prog_STRIP"
++fi
++
++fi
++INSTALL_STRIP_PROGRAM="\$(install_sh) -c -s"
++
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for a thread-safe mkdir -p" >&5
++$as_echo_n "checking for a thread-safe mkdir -p... " >&6; }
++if test -z "$MKDIR_P"; then
++ if test "${ac_cv_path_mkdir+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH$PATH_SEPARATOR/opt/sfw/bin
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ for ac_prog in mkdir gmkdir; do
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ { test -f "$as_dir/$ac_prog$ac_exec_ext" && $as_test_x "$as_dir/$ac_prog$ac_exec_ext"; } || continue
++ case `"$as_dir/$ac_prog$ac_exec_ext" --version 2>&1` in #(
++ 'mkdir (GNU coreutils) '* | \
++ 'mkdir (coreutils) '* | \
++ 'mkdir (fileutils) '4.1*)
++ ac_cv_path_mkdir=$as_dir/$ac_prog$ac_exec_ext
++ break 3;;
++ esac
++ done
++ done
++ done
++IFS=$as_save_IFS
++
++fi
++
++ test -d ./--version && rmdir ./--version
++ if test "${ac_cv_path_mkdir+set}" = set; then
++ MKDIR_P="$ac_cv_path_mkdir -p"
++ else
++ # As a last resort, use the slow shell script. Don't cache a
++ # value for MKDIR_P within a source directory, because that will
++ # break other packages using the cache if that directory is
++ # removed, or if the value is a relative name.
++ MKDIR_P="$ac_install_sh -d"
++ fi
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $MKDIR_P" >&5
++$as_echo "$MKDIR_P" >&6; }
++
++mkdir_p="$MKDIR_P"
++case $mkdir_p in
++ [\\/$]* | ?:[\\/]*) ;;
++ */*) mkdir_p="\$(top_builddir)/$mkdir_p" ;;
++esac
++
++for ac_prog in gawk mawk nawk awk
++do
++ # Extract the first word of "$ac_prog", so it can be a program name with args.
++set dummy $ac_prog; ac_word=$2
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
++$as_echo_n "checking for $ac_word... " >&6; }
++if test "${ac_cv_prog_AWK+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test -n "$AWK"; then
++ ac_cv_prog_AWK="$AWK" # Let the user override the test.
++else
++as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
++ ac_cv_prog_AWK="$ac_prog"
++ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
++ break 2
++ fi
++done
++ done
++IFS=$as_save_IFS
++
++fi
++fi
++AWK=$ac_cv_prog_AWK
++if test -n "$AWK"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $AWK" >&5
++$as_echo "$AWK" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++
++ test -n "$AWK" && break
++done
++
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking whether ${MAKE-make} sets \$(MAKE)" >&5
++$as_echo_n "checking whether ${MAKE-make} sets \$(MAKE)... " >&6; }
++set x ${MAKE-make}
++ac_make=`$as_echo "$2" | sed 's/+/p/g; s/[^a-zA-Z0-9_]/_/g'`
++if { as_var=ac_cv_prog_make_${ac_make}_set; eval "test \"\${$as_var+set}\" = set"; }; then :
++ $as_echo_n "(cached) " >&6
++else
++ cat >conftest.make <<\_ACEOF
++SHELL = /bin/sh
++all:
++ @echo '@@@%%%=$(MAKE)=@@@%%%'
++_ACEOF
++# GNU make sometimes prints "make[1]: Entering...", which would confuse us.
++case `${MAKE-make} -f conftest.make 2>/dev/null` in
++ *@@@%%%=?*=@@@%%%*)
++ eval ac_cv_prog_make_${ac_make}_set=yes;;
++ *)
++ eval ac_cv_prog_make_${ac_make}_set=no;;
++esac
++rm -f conftest.make
++fi
++if eval test \$ac_cv_prog_make_${ac_make}_set = yes; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
++$as_echo "yes" >&6; }
++ SET_MAKE=
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++ SET_MAKE="MAKE=${MAKE-make}"
++fi
++
++rm -rf .tst 2>/dev/null
++mkdir .tst 2>/dev/null
++if test -d .tst; then
++ am__leading_dot=.
++else
++ am__leading_dot=_
++fi
++rmdir .tst 2>/dev/null
++
++if test "`cd $srcdir && pwd`" != "`pwd`"; then
++ # Use -I$(srcdir) only when $(srcdir) != ., so that make's output
++ # is not polluted with repeated "-I."
++ am__isrc=' -I$(srcdir)'
++ # test to see if srcdir already configured
++ if test -f $srcdir/config.status; then
++ as_fn_error "source directory already configured; run \"make distclean\" there first" "$LINENO" 5
++ fi
++fi
++
++# test whether we have cygpath
++if test -z "$CYGPATH_W"; then
++ if (cygpath --version) >/dev/null 2>/dev/null; then
++ CYGPATH_W='cygpath -w'
++ else
++ CYGPATH_W=echo
++ fi
++fi
++
++
++# Define the identity of the package.
++ PACKAGE=EMBOSS
++ VERSION=6.3.1
++
++
++cat >>confdefs.h <<_ACEOF
++@%:@define PACKAGE "$PACKAGE"
++_ACEOF
++
++
++cat >>confdefs.h <<_ACEOF
++@%:@define VERSION "$VERSION"
++_ACEOF
++
++# Some tools Automake needs.
++
++ACLOCAL=${ACLOCAL-"${am_missing_run}aclocal-${am__api_version}"}
++
++
++AUTOCONF=${AUTOCONF-"${am_missing_run}autoconf"}
++
++
++AUTOMAKE=${AUTOMAKE-"${am_missing_run}automake-${am__api_version}"}
++
++
++AUTOHEADER=${AUTOHEADER-"${am_missing_run}autoheader"}
++
++
++MAKEINFO=${MAKEINFO-"${am_missing_run}makeinfo"}
++
++# We need awk for the "check" target. The system "awk" is bad on
++# some platforms.
++# Always define AMTAR for backward compatibility.
++
++AMTAR=${AMTAR-"${am_missing_run}tar"}
++
++am__tar='${AMTAR} chof - "$$tardir"'; am__untar='${AMTAR} xf -'
++
++
++
++
++
++
++# Make sure CFLAGS is defined to stop LT_INIT adding -g
++CFLAGS="$CFLAGS "
++
++# Use libtool to make a shared library.
++case `pwd` in
++ *\ * | *\ *)
++ { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: Libtool does not cope well with whitespace in \`pwd\`" >&5
++$as_echo "$as_me: WARNING: Libtool does not cope well with whitespace in \`pwd\`" >&2;} ;;
++esac
++
++
++
++macro_version='2.2.6b'
++macro_revision='1.3017'
++
++
++
++
++
++
++
++
++
++
++
++
++
++ltmain="$ac_aux_dir/ltmain.sh"
++
++# Make sure we can run config.sub.
++$SHELL "$ac_aux_dir/config.sub" sun4 >/dev/null 2>&1 ||
++ as_fn_error "cannot run $SHELL $ac_aux_dir/config.sub" "$LINENO" 5
++
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking build system type" >&5
++$as_echo_n "checking build system type... " >&6; }
++if test "${ac_cv_build+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ ac_build_alias=$build_alias
++test "x$ac_build_alias" = x &&
++ ac_build_alias=`$SHELL "$ac_aux_dir/config.guess"`
++test "x$ac_build_alias" = x &&
++ as_fn_error "cannot guess build type; you must specify one" "$LINENO" 5
++ac_cv_build=`$SHELL "$ac_aux_dir/config.sub" $ac_build_alias` ||
++ as_fn_error "$SHELL $ac_aux_dir/config.sub $ac_build_alias failed" "$LINENO" 5
++
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_build" >&5
++$as_echo "$ac_cv_build" >&6; }
++case $ac_cv_build in
++*-*-*) ;;
++*) as_fn_error "invalid value of canonical build" "$LINENO" 5;;
++esac
++build=$ac_cv_build
++ac_save_IFS=$IFS; IFS='-'
++set x $ac_cv_build
++shift
++build_cpu=$1
++build_vendor=$2
++shift; shift
++# Remember, the first character of IFS is used to create $*,
++# except with old shells:
++build_os=$*
++IFS=$ac_save_IFS
++case $build_os in *\ *) build_os=`echo "$build_os" | sed 's/ /-/g'`;; esac
++
++
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking host system type" >&5
++$as_echo_n "checking host system type... " >&6; }
++if test "${ac_cv_host+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test "x$host_alias" = x; then
++ ac_cv_host=$ac_cv_build
++else
++ ac_cv_host=`$SHELL "$ac_aux_dir/config.sub" $host_alias` ||
++ as_fn_error "$SHELL $ac_aux_dir/config.sub $host_alias failed" "$LINENO" 5
++fi
++
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_host" >&5
++$as_echo "$ac_cv_host" >&6; }
++case $ac_cv_host in
++*-*-*) ;;
++*) as_fn_error "invalid value of canonical host" "$LINENO" 5;;
++esac
++host=$ac_cv_host
++ac_save_IFS=$IFS; IFS='-'
++set x $ac_cv_host
++shift
++host_cpu=$1
++host_vendor=$2
++shift; shift
++# Remember, the first character of IFS is used to create $*,
++# except with old shells:
++host_os=$*
++IFS=$ac_save_IFS
++case $host_os in *\ *) host_os=`echo "$host_os" | sed 's/ /-/g'`;; esac
++
++
++DEPDIR="${am__leading_dot}deps"
++
++ac_config_commands="$ac_config_commands depfiles"
++
++
++am_make=${MAKE-make}
++cat > confinc << 'END'
++am__doit:
++ @echo this is the am__doit target
++.PHONY: am__doit
++END
++# If we don't find an include directive, just comment out the code.
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for style of include used by $am_make" >&5
++$as_echo_n "checking for style of include used by $am_make... " >&6; }
++am__include="#"
++am__quote=
++_am_result=none
++# First try GNU make style include.
++echo "include confinc" > confmf
++# Ignore all kinds of additional output from `make'.
++case `$am_make -s -f confmf 2> /dev/null` in #(
++*the\ am__doit\ target*)
++ am__include=include
++ am__quote=
++ _am_result=GNU
++ ;;
++esac
++# Now try BSD make style include.
++if test "$am__include" = "#"; then
++ echo '.include "confinc"' > confmf
++ case `$am_make -s -f confmf 2> /dev/null` in #(
++ *the\ am__doit\ target*)
++ am__include=.include
++ am__quote="\""
++ _am_result=BSD
++ ;;
++ esac
++fi
++
++
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $_am_result" >&5
++$as_echo "$_am_result" >&6; }
++rm -f confinc confmf
++
++@%:@ Check whether --enable-dependency-tracking was given.
++if test "${enable_dependency_tracking+set}" = set; then :
++ enableval=$enable_dependency_tracking;
++fi
++
++if test "x$enable_dependency_tracking" != xno; then
++ am_depcomp="$ac_aux_dir/depcomp"
++ AMDEPBACKSLASH='\'
++fi
++ if test "x$enable_dependency_tracking" != xno; then
++ AMDEP_TRUE=
++ AMDEP_FALSE='#'
++else
++ AMDEP_TRUE='#'
++ AMDEP_FALSE=
++fi
++
++
++ac_ext=c
++ac_cpp='$CPP $CPPFLAGS'
++ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5'
++ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
++ac_compiler_gnu=$ac_cv_c_compiler_gnu
++if test -n "$ac_tool_prefix"; then
++ # Extract the first word of "${ac_tool_prefix}gcc", so it can be a program name with args.
++set dummy ${ac_tool_prefix}gcc; ac_word=$2
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
++$as_echo_n "checking for $ac_word... " >&6; }
++if test "${ac_cv_prog_CC+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test -n "$CC"; then
++ ac_cv_prog_CC="$CC" # Let the user override the test.
++else
++as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
++ ac_cv_prog_CC="${ac_tool_prefix}gcc"
++ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
++ break 2
++ fi
++done
++ done
++IFS=$as_save_IFS
++
++fi
++fi
++CC=$ac_cv_prog_CC
++if test -n "$CC"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $CC" >&5
++$as_echo "$CC" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++
++fi
++if test -z "$ac_cv_prog_CC"; then
++ ac_ct_CC=$CC
++ # Extract the first word of "gcc", so it can be a program name with args.
++set dummy gcc; ac_word=$2
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
++$as_echo_n "checking for $ac_word... " >&6; }
++if test "${ac_cv_prog_ac_ct_CC+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test -n "$ac_ct_CC"; then
++ ac_cv_prog_ac_ct_CC="$ac_ct_CC" # Let the user override the test.
++else
++as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
++ ac_cv_prog_ac_ct_CC="gcc"
++ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
++ break 2
++ fi
++done
++ done
++IFS=$as_save_IFS
++
++fi
++fi
++ac_ct_CC=$ac_cv_prog_ac_ct_CC
++if test -n "$ac_ct_CC"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_ct_CC" >&5
++$as_echo "$ac_ct_CC" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++ if test "x$ac_ct_CC" = x; then
++ CC=""
++ else
++ case $cross_compiling:$ac_tool_warned in
++yes:)
++{ $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: using cross tools not prefixed with host triplet" >&5
++$as_echo "$as_me: WARNING: using cross tools not prefixed with host triplet" >&2;}
++ac_tool_warned=yes ;;
++esac
++ CC=$ac_ct_CC
++ fi
++else
++ CC="$ac_cv_prog_CC"
++fi
++
++if test -z "$CC"; then
++ if test -n "$ac_tool_prefix"; then
++ # Extract the first word of "${ac_tool_prefix}cc", so it can be a program name with args.
++set dummy ${ac_tool_prefix}cc; ac_word=$2
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
++$as_echo_n "checking for $ac_word... " >&6; }
++if test "${ac_cv_prog_CC+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test -n "$CC"; then
++ ac_cv_prog_CC="$CC" # Let the user override the test.
++else
++as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
++ ac_cv_prog_CC="${ac_tool_prefix}cc"
++ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
++ break 2
++ fi
++done
++ done
++IFS=$as_save_IFS
++
++fi
++fi
++CC=$ac_cv_prog_CC
++if test -n "$CC"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $CC" >&5
++$as_echo "$CC" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++
++ fi
++fi
++if test -z "$CC"; then
++ # Extract the first word of "cc", so it can be a program name with args.
++set dummy cc; ac_word=$2
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
++$as_echo_n "checking for $ac_word... " >&6; }
++if test "${ac_cv_prog_CC+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test -n "$CC"; then
++ ac_cv_prog_CC="$CC" # Let the user override the test.
++else
++ ac_prog_rejected=no
++as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
++ if test "$as_dir/$ac_word$ac_exec_ext" = "/usr/ucb/cc"; then
++ ac_prog_rejected=yes
++ continue
++ fi
++ ac_cv_prog_CC="cc"
++ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
++ break 2
++ fi
++done
++ done
++IFS=$as_save_IFS
++
++if test $ac_prog_rejected = yes; then
++ # We found a bogon in the path, so make sure we never use it.
++ set dummy $ac_cv_prog_CC
++ shift
++ if test $@%:@ != 0; then
++ # We chose a different compiler from the bogus one.
++ # However, it has the same basename, so the bogon will be chosen
++ # first if we set CC to just the basename; use the full file name.
++ shift
++ ac_cv_prog_CC="$as_dir/$ac_word${1+' '}$@"
++ fi
++fi
++fi
++fi
++CC=$ac_cv_prog_CC
++if test -n "$CC"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $CC" >&5
++$as_echo "$CC" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++
++fi
++if test -z "$CC"; then
++ if test -n "$ac_tool_prefix"; then
++ for ac_prog in cl.exe
++ do
++ # Extract the first word of "$ac_tool_prefix$ac_prog", so it can be a program name with args.
++set dummy $ac_tool_prefix$ac_prog; ac_word=$2
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
++$as_echo_n "checking for $ac_word... " >&6; }
++if test "${ac_cv_prog_CC+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test -n "$CC"; then
++ ac_cv_prog_CC="$CC" # Let the user override the test.
++else
++as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
++ ac_cv_prog_CC="$ac_tool_prefix$ac_prog"
++ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
++ break 2
++ fi
++done
++ done
++IFS=$as_save_IFS
++
++fi
++fi
++CC=$ac_cv_prog_CC
++if test -n "$CC"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $CC" >&5
++$as_echo "$CC" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++
++ test -n "$CC" && break
++ done
++fi
++if test -z "$CC"; then
++ ac_ct_CC=$CC
++ for ac_prog in cl.exe
++do
++ # Extract the first word of "$ac_prog", so it can be a program name with args.
++set dummy $ac_prog; ac_word=$2
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
++$as_echo_n "checking for $ac_word... " >&6; }
++if test "${ac_cv_prog_ac_ct_CC+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test -n "$ac_ct_CC"; then
++ ac_cv_prog_ac_ct_CC="$ac_ct_CC" # Let the user override the test.
++else
++as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
++ ac_cv_prog_ac_ct_CC="$ac_prog"
++ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
++ break 2
++ fi
++done
++ done
++IFS=$as_save_IFS
++
++fi
++fi
++ac_ct_CC=$ac_cv_prog_ac_ct_CC
++if test -n "$ac_ct_CC"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_ct_CC" >&5
++$as_echo "$ac_ct_CC" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++
++ test -n "$ac_ct_CC" && break
++done
++
++ if test "x$ac_ct_CC" = x; then
++ CC=""
++ else
++ case $cross_compiling:$ac_tool_warned in
++yes:)
++{ $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: using cross tools not prefixed with host triplet" >&5
++$as_echo "$as_me: WARNING: using cross tools not prefixed with host triplet" >&2;}
++ac_tool_warned=yes ;;
++esac
++ CC=$ac_ct_CC
++ fi
++fi
++
++fi
++
++
++test -z "$CC" && { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
++$as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
++as_fn_error "no acceptable C compiler found in \$PATH
++See \`config.log' for more details." "$LINENO" 5; }
++
++# Provide some information about the compiler.
++$as_echo "$as_me:${as_lineno-$LINENO}: checking for C compiler version" >&5
++set X $ac_compile
++ac_compiler=$2
++for ac_option in --version -v -V -qversion; do
++ { { ac_try="$ac_compiler $ac_option >&5"
++case "(($ac_try" in
++ *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
++ *) ac_try_echo=$ac_try;;
++esac
++eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
++$as_echo "$ac_try_echo"; } >&5
++ (eval "$ac_compiler $ac_option >&5") 2>conftest.err
++ ac_status=$?
++ if test -s conftest.err; then
++ sed '10a\
++... rest of stderr output deleted ...
++ 10q' conftest.err >conftest.er1
++ cat conftest.er1 >&5
++ fi
++ rm -f conftest.er1 conftest.err
++ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
++ test $ac_status = 0; }
++done
++
++cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++int
++main ()
++{
++
++ ;
++ return 0;
++}
++_ACEOF
++ac_clean_files_save=$ac_clean_files
++ac_clean_files="$ac_clean_files a.out a.out.dSYM a.exe b.out"
++# Try to create an executable without -o first, disregard a.out.
++# It will help us diagnose broken compilers, and finding out an intuition
++# of exeext.
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking whether the C compiler works" >&5
++$as_echo_n "checking whether the C compiler works... " >&6; }
++ac_link_default=`$as_echo "$ac_link" | sed 's/ -o *conftest[^ ]*//'`
++
++# The possible output files:
++ac_files="a.out conftest.exe conftest a.exe a_out.exe b.out conftest.*"
++
++ac_rmfiles=
++for ac_file in $ac_files
++do
++ case $ac_file in
++ *.$ac_ext | *.xcoff | *.tds | *.d | *.pdb | *.xSYM | *.bb | *.bbg | *.map | *.inf | *.dSYM | *.o | *.obj ) ;;
++ * ) ac_rmfiles="$ac_rmfiles $ac_file";;
++ esac
++done
++rm -f $ac_rmfiles
++
++if { { ac_try="$ac_link_default"
++case "(($ac_try" in
++ *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
++ *) ac_try_echo=$ac_try;;
++esac
++eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
++$as_echo "$ac_try_echo"; } >&5
++ (eval "$ac_link_default") 2>&5
++ ac_status=$?
++ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
++ test $ac_status = 0; }; then :
++ # Autoconf-2.13 could set the ac_cv_exeext variable to `no'.
++# So ignore a value of `no', otherwise this would lead to `EXEEXT = no'
++# in a Makefile. We should not override ac_cv_exeext if it was cached,
++# so that the user can short-circuit this test for compilers unknown to
++# Autoconf.
++for ac_file in $ac_files ''
++do
++ test -f "$ac_file" || continue
++ case $ac_file in
++ *.$ac_ext | *.xcoff | *.tds | *.d | *.pdb | *.xSYM | *.bb | *.bbg | *.map | *.inf | *.dSYM | *.o | *.obj )
++ ;;
++ [ab].out )
++ # We found the default executable, but exeext='' is most
++ # certainly right.
++ break;;
++ *.* )
++ if test "${ac_cv_exeext+set}" = set && test "$ac_cv_exeext" != no;
++ then :; else
++ ac_cv_exeext=`expr "$ac_file" : '[^.]*\(\..*\)'`
++ fi
++ # We set ac_cv_exeext here because the later test for it is not
++ # safe: cross compilers may not add the suffix if given an `-o'
++ # argument, so we may need to know it at that point already.
++ # Even if this section looks crufty: it has the advantage of
++ # actually working.
++ break;;
++ * )
++ break;;
++ esac
++done
++test "$ac_cv_exeext" = no && ac_cv_exeext=
++
++else
++ ac_file=''
++fi
++if test -z "$ac_file"; then :
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++$as_echo "$as_me: failed program was:" >&5
++sed 's/^/| /' conftest.$ac_ext >&5
++
++{ { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
++$as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
++{ as_fn_set_status 77
++as_fn_error "C compiler cannot create executables
++See \`config.log' for more details." "$LINENO" 5; }; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
++$as_echo "yes" >&6; }
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for C compiler default output file name" >&5
++$as_echo_n "checking for C compiler default output file name... " >&6; }
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_file" >&5
++$as_echo "$ac_file" >&6; }
++ac_exeext=$ac_cv_exeext
++
++rm -f -r a.out a.out.dSYM a.exe conftest$ac_cv_exeext b.out
++ac_clean_files=$ac_clean_files_save
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for suffix of executables" >&5
++$as_echo_n "checking for suffix of executables... " >&6; }
++if { { ac_try="$ac_link"
++case "(($ac_try" in
++ *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
++ *) ac_try_echo=$ac_try;;
++esac
++eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
++$as_echo "$ac_try_echo"; } >&5
++ (eval "$ac_link") 2>&5
++ ac_status=$?
++ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
++ test $ac_status = 0; }; then :
++ # If both `conftest.exe' and `conftest' are `present' (well, observable)
++# catch `conftest.exe'. For instance with Cygwin, `ls conftest' will
++# work properly (i.e., refer to `conftest.exe'), while it won't with
++# `rm'.
++for ac_file in conftest.exe conftest conftest.*; do
++ test -f "$ac_file" || continue
++ case $ac_file in
++ *.$ac_ext | *.xcoff | *.tds | *.d | *.pdb | *.xSYM | *.bb | *.bbg | *.map | *.inf | *.dSYM | *.o | *.obj ) ;;
++ *.* ) ac_cv_exeext=`expr "$ac_file" : '[^.]*\(\..*\)'`
++ break;;
++ * ) break;;
++ esac
++done
++else
++ { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
++$as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
++as_fn_error "cannot compute suffix of executables: cannot compile and link
++See \`config.log' for more details." "$LINENO" 5; }
++fi
++rm -f conftest conftest$ac_cv_exeext
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_exeext" >&5
++$as_echo "$ac_cv_exeext" >&6; }
++
++rm -f conftest.$ac_ext
++EXEEXT=$ac_cv_exeext
++ac_exeext=$EXEEXT
++cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++@%:@include <stdio.h>
++int
++main ()
++{
++FILE *f = fopen ("conftest.out", "w");
++ return ferror (f) || fclose (f) != 0;
++
++ ;
++ return 0;
++}
++_ACEOF
++ac_clean_files="$ac_clean_files conftest.out"
++# Check that the compiler produces executables we can run. If not, either
++# the compiler is broken, or we cross compile.
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking whether we are cross compiling" >&5
++$as_echo_n "checking whether we are cross compiling... " >&6; }
++if test "$cross_compiling" != yes; then
++ { { ac_try="$ac_link"
++case "(($ac_try" in
++ *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
++ *) ac_try_echo=$ac_try;;
++esac
++eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
++$as_echo "$ac_try_echo"; } >&5
++ (eval "$ac_link") 2>&5
++ ac_status=$?
++ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
++ test $ac_status = 0; }
++ if { ac_try='./conftest$ac_cv_exeext'
++ { { case "(($ac_try" in
++ *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
++ *) ac_try_echo=$ac_try;;
++esac
++eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
++$as_echo "$ac_try_echo"; } >&5
++ (eval "$ac_try") 2>&5
++ ac_status=$?
++ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
++ test $ac_status = 0; }; }; then
++ cross_compiling=no
++ else
++ if test "$cross_compiling" = maybe; then
++ cross_compiling=yes
++ else
++ { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
++$as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
++as_fn_error "cannot run C compiled programs.
++If you meant to cross compile, use \`--host'.
++See \`config.log' for more details." "$LINENO" 5; }
++ fi
++ fi
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $cross_compiling" >&5
++$as_echo "$cross_compiling" >&6; }
++
++rm -f conftest.$ac_ext conftest$ac_cv_exeext conftest.out
++ac_clean_files=$ac_clean_files_save
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for suffix of object files" >&5
++$as_echo_n "checking for suffix of object files... " >&6; }
++if test "${ac_cv_objext+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++int
++main ()
++{
++
++ ;
++ return 0;
++}
++_ACEOF
++rm -f conftest.o conftest.obj
++if { { ac_try="$ac_compile"
++case "(($ac_try" in
++ *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
++ *) ac_try_echo=$ac_try;;
++esac
++eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
++$as_echo "$ac_try_echo"; } >&5
++ (eval "$ac_compile") 2>&5
++ ac_status=$?
++ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
++ test $ac_status = 0; }; then :
++ for ac_file in conftest.o conftest.obj conftest.*; do
++ test -f "$ac_file" || continue;
++ case $ac_file in
++ *.$ac_ext | *.xcoff | *.tds | *.d | *.pdb | *.xSYM | *.bb | *.bbg | *.map | *.inf | *.dSYM ) ;;
++ *) ac_cv_objext=`expr "$ac_file" : '.*\.\(.*\)'`
++ break;;
++ esac
++done
++else
++ $as_echo "$as_me: failed program was:" >&5
++sed 's/^/| /' conftest.$ac_ext >&5
++
++{ { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
++$as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
++as_fn_error "cannot compute suffix of object files: cannot compile
++See \`config.log' for more details." "$LINENO" 5; }
++fi
++rm -f conftest.$ac_cv_objext conftest.$ac_ext
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_objext" >&5
++$as_echo "$ac_cv_objext" >&6; }
++OBJEXT=$ac_cv_objext
++ac_objext=$OBJEXT
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking whether we are using the GNU C compiler" >&5
++$as_echo_n "checking whether we are using the GNU C compiler... " >&6; }
++if test "${ac_cv_c_compiler_gnu+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++int
++main ()
++{
++#ifndef __GNUC__
++ choke me
++#endif
++
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_compile "$LINENO"; then :
++ ac_compiler_gnu=yes
++else
++ ac_compiler_gnu=no
++fi
++rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
++ac_cv_c_compiler_gnu=$ac_compiler_gnu
++
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_c_compiler_gnu" >&5
++$as_echo "$ac_cv_c_compiler_gnu" >&6; }
++if test $ac_compiler_gnu = yes; then
++ GCC=yes
++else
++ GCC=
++fi
++ac_test_CFLAGS=${CFLAGS+set}
++ac_save_CFLAGS=$CFLAGS
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking whether $CC accepts -g" >&5
++$as_echo_n "checking whether $CC accepts -g... " >&6; }
++if test "${ac_cv_prog_cc_g+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ ac_save_c_werror_flag=$ac_c_werror_flag
++ ac_c_werror_flag=yes
++ ac_cv_prog_cc_g=no
++ CFLAGS="-g"
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++int
++main ()
++{
++
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_compile "$LINENO"; then :
++ ac_cv_prog_cc_g=yes
++else
++ CFLAGS=""
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++int
++main ()
++{
++
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_compile "$LINENO"; then :
++
++else
++ ac_c_werror_flag=$ac_save_c_werror_flag
++ CFLAGS="-g"
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++int
++main ()
++{
++
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_compile "$LINENO"; then :
++ ac_cv_prog_cc_g=yes
++fi
++rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
++fi
++rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
++fi
++rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
++ ac_c_werror_flag=$ac_save_c_werror_flag
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_prog_cc_g" >&5
++$as_echo "$ac_cv_prog_cc_g" >&6; }
++if test "$ac_test_CFLAGS" = set; then
++ CFLAGS=$ac_save_CFLAGS
++elif test $ac_cv_prog_cc_g = yes; then
++ if test "$GCC" = yes; then
++ CFLAGS="-g -O2"
++ else
++ CFLAGS="-g"
++ fi
++else
++ if test "$GCC" = yes; then
++ CFLAGS="-O2"
++ else
++ CFLAGS=
++ fi
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $CC option to accept ISO C89" >&5
++$as_echo_n "checking for $CC option to accept ISO C89... " >&6; }
++if test "${ac_cv_prog_cc_c89+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ ac_cv_prog_cc_c89=no
++ac_save_CC=$CC
++cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++#include <stdarg.h>
++#include <stdio.h>
++#include <sys/types.h>
++#include <sys/stat.h>
++/* Most of the following tests are stolen from RCS 5.7's src/conf.sh. */
++struct buf { int x; };
++FILE * (*rcsopen) (struct buf *, struct stat *, int);
++static char *e (p, i)
++ char **p;
++ int i;
++{
++ return p[i];
++}
++static char *f (char * (*g) (char **, int), char **p, ...)
++{
++ char *s;
++ va_list v;
++ va_start (v,p);
++ s = g (p, va_arg (v,int));
++ va_end (v);
++ return s;
++}
++
++/* OSF 4.0 Compaq cc is some sort of almost-ANSI by default. It has
++ function prototypes and stuff, but not '\xHH' hex character constants.
++ These don't provoke an error unfortunately, instead are silently treated
++ as 'x'. The following induces an error, until -std is added to get
++ proper ANSI mode. Curiously '\x00'!='x' always comes out true, for an
++ array size at least. It's necessary to write '\x00'==0 to get something
++ that's true only with -std. */
++int osf4_cc_array ['\x00' == 0 ? 1 : -1];
++
++/* IBM C 6 for AIX is almost-ANSI by default, but it replaces macro parameters
++ inside strings and character constants. */
++#define FOO(x) 'x'
++int xlc6_cc_array[FOO(a) == 'x' ? 1 : -1];
++
++int test (int i, double x);
++struct s1 {int (*f) (int a);};
++struct s2 {int (*f) (double a);};
++int pairnames (int, char **, FILE *(*)(struct buf *, struct stat *, int), int, int);
++int argc;
++char **argv;
++int
++main ()
++{
++return f (e, argv, 0) != argv[0] || f (e, argv, 1) != argv[1];
++ ;
++ return 0;
++}
++_ACEOF
++for ac_arg in '' -qlanglvl=extc89 -qlanglvl=ansi -std \
++ -Ae "-Aa -D_HPUX_SOURCE" "-Xc -D__EXTENSIONS__"
++do
++ CC="$ac_save_CC $ac_arg"
++ if ac_fn_c_try_compile "$LINENO"; then :
++ ac_cv_prog_cc_c89=$ac_arg
++fi
++rm -f core conftest.err conftest.$ac_objext
++ test "x$ac_cv_prog_cc_c89" != "xno" && break
++done
++rm -f conftest.$ac_ext
++CC=$ac_save_CC
++
++fi
++# AC_CACHE_VAL
++case "x$ac_cv_prog_cc_c89" in
++ x)
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: none needed" >&5
++$as_echo "none needed" >&6; } ;;
++ xno)
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: unsupported" >&5
++$as_echo "unsupported" >&6; } ;;
++ *)
++ CC="$CC $ac_cv_prog_cc_c89"
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_prog_cc_c89" >&5
++$as_echo "$ac_cv_prog_cc_c89" >&6; } ;;
++esac
++if test "x$ac_cv_prog_cc_c89" != xno; then :
++
++fi
++
++ac_ext=c
++ac_cpp='$CPP $CPPFLAGS'
++ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5'
++ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
++ac_compiler_gnu=$ac_cv_c_compiler_gnu
++
++depcc="$CC" am_compiler_list=
++
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking dependency style of $depcc" >&5
++$as_echo_n "checking dependency style of $depcc... " >&6; }
++if test "${am_cv_CC_dependencies_compiler_type+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test -z "$AMDEP_TRUE" && test -f "$am_depcomp"; then
++ # We make a subdir and do the tests there. Otherwise we can end up
++ # making bogus files that we don't know about and never remove. For
++ # instance it was reported that on HP-UX the gcc test will end up
++ # making a dummy file named `D' -- because `-MD' means `put the output
++ # in D'.
++ mkdir conftest.dir
++ # Copy depcomp to subdir because otherwise we won't find it if we're
++ # using a relative directory.
++ cp "$am_depcomp" conftest.dir
++ cd conftest.dir
++ # We will build objects and dependencies in a subdirectory because
++ # it helps to detect inapplicable dependency modes. For instance
++ # both Tru64's cc and ICC support -MD to output dependencies as a
++ # side effect of compilation, but ICC will put the dependencies in
++ # the current directory while Tru64 will put them in the object
++ # directory.
++ mkdir sub
++
++ am_cv_CC_dependencies_compiler_type=none
++ if test "$am_compiler_list" = ""; then
++ am_compiler_list=`sed -n 's/^#*\([a-zA-Z0-9]*\))$/\1/p' < ./depcomp`
++ fi
++ am__universal=false
++ case " $depcc " in #(
++ *\ -arch\ *\ -arch\ *) am__universal=true ;;
++ esac
++
++ for depmode in $am_compiler_list; do
++ # Setup a source with many dependencies, because some compilers
++ # like to wrap large dependency lists on column 80 (with \), and
++ # we should not choose a depcomp mode which is confused by this.
++ #
++ # We need to recreate these files for each test, as the compiler may
++ # overwrite some of them when testing with obscure command lines.
++ # This happens at least with the AIX C compiler.
++ : > sub/conftest.c
++ for i in 1 2 3 4 5 6; do
++ echo '#include "conftst'$i'.h"' >> sub/conftest.c
++ # Using `: > sub/conftst$i.h' creates only sub/conftst1.h with
++ # Solaris 8's {/usr,}/bin/sh.
++ touch sub/conftst$i.h
++ done
++ echo "${am__include} ${am__quote}sub/conftest.Po${am__quote}" > confmf
++
++ # We check with `-c' and `-o' for the sake of the "dashmstdout"
++ # mode. It turns out that the SunPro C++ compiler does not properly
++ # handle `-M -o', and we need to detect this. Also, some Intel
++ # versions had trouble with output in subdirs
++ am__obj=sub/conftest.${OBJEXT-o}
++ am__minus_obj="-o $am__obj"
++ case $depmode in
++ gcc)
++ # This depmode causes a compiler race in universal mode.
++ test "$am__universal" = false || continue
++ ;;
++ nosideeffect)
++ # after this tag, mechanisms are not by side-effect, so they'll
++ # only be used when explicitly requested
++ if test "x$enable_dependency_tracking" = xyes; then
++ continue
++ else
++ break
++ fi
++ ;;
++ msvisualcpp | msvcmsys)
++ # This compiler won't grok `-c -o', but also, the minuso test has
++ # not run yet. These depmodes are late enough in the game, and
++ # so weak that their functioning should not be impacted.
++ am__obj=conftest.${OBJEXT-o}
++ am__minus_obj=
++ ;;
++ none) break ;;
++ esac
++ if depmode=$depmode \
++ source=sub/conftest.c object=$am__obj \
++ depfile=sub/conftest.Po tmpdepfile=sub/conftest.TPo \
++ $SHELL ./depcomp $depcc -c $am__minus_obj sub/conftest.c \
++ >/dev/null 2>conftest.err &&
++ grep sub/conftst1.h sub/conftest.Po > /dev/null 2>&1 &&
++ grep sub/conftst6.h sub/conftest.Po > /dev/null 2>&1 &&
++ grep $am__obj sub/conftest.Po > /dev/null 2>&1 &&
++ ${MAKE-make} -s -f confmf > /dev/null 2>&1; then
++ # icc doesn't choke on unknown options, it will just issue warnings
++ # or remarks (even with -Werror). So we grep stderr for any message
++ # that says an option was ignored or not supported.
++ # When given -MP, icc 7.0 and 7.1 complain thusly:
++ # icc: Command line warning: ignoring option '-M'; no argument required
++ # The diagnosis changed in icc 8.0:
++ # icc: Command line remark: option '-MP' not supported
++ if (grep 'ignoring option' conftest.err ||
++ grep 'not supported' conftest.err) >/dev/null 2>&1; then :; else
++ am_cv_CC_dependencies_compiler_type=$depmode
++ break
++ fi
++ fi
++ done
++
++ cd ..
++ rm -rf conftest.dir
++else
++ am_cv_CC_dependencies_compiler_type=none
++fi
++
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $am_cv_CC_dependencies_compiler_type" >&5
++$as_echo "$am_cv_CC_dependencies_compiler_type" >&6; }
++CCDEPMODE=depmode=$am_cv_CC_dependencies_compiler_type
++
++ if
++ test "x$enable_dependency_tracking" != xno \
++ && test "$am_cv_CC_dependencies_compiler_type" = gcc3; then
++ am__fastdepCC_TRUE=
++ am__fastdepCC_FALSE='#'
++else
++ am__fastdepCC_TRUE='#'
++ am__fastdepCC_FALSE=
++fi
++
++
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for a sed that does not truncate output" >&5
++$as_echo_n "checking for a sed that does not truncate output... " >&6; }
++if test "${ac_cv_path_SED+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ ac_script=s/aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa/bbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbb/
++ for ac_i in 1 2 3 4 5 6 7; do
++ ac_script="$ac_script$as_nl$ac_script"
++ done
++ echo "$ac_script" 2>/dev/null | sed 99q >conftest.sed
++ { ac_script=; unset ac_script;}
++ if test -z "$SED"; then
++ ac_path_SED_found=false
++ # Loop through the user's path and test for each of PROGNAME-LIST
++ as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ for ac_prog in sed gsed; do
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ ac_path_SED="$as_dir/$ac_prog$ac_exec_ext"
++ { test -f "$ac_path_SED" && $as_test_x "$ac_path_SED"; } || continue
++# Check for GNU ac_path_SED and select it if it is found.
++ # Check for GNU $ac_path_SED
++case `"$ac_path_SED" --version 2>&1` in
++*GNU*)
++ ac_cv_path_SED="$ac_path_SED" ac_path_SED_found=:;;
++*)
++ ac_count=0
++ $as_echo_n 0123456789 >"conftest.in"
++ while :
++ do
++ cat "conftest.in" "conftest.in" >"conftest.tmp"
++ mv "conftest.tmp" "conftest.in"
++ cp "conftest.in" "conftest.nl"
++ $as_echo '' >> "conftest.nl"
++ "$ac_path_SED" -f conftest.sed < "conftest.nl" >"conftest.out" 2>/dev/null || break
++ diff "conftest.out" "conftest.nl" >/dev/null 2>&1 || break
++ as_fn_arith $ac_count + 1 && ac_count=$as_val
++ if test $ac_count -gt ${ac_path_SED_max-0}; then
++ # Best one so far, save it but keep looking for a better one
++ ac_cv_path_SED="$ac_path_SED"
++ ac_path_SED_max=$ac_count
++ fi
++ # 10*(2^10) chars as input seems more than enough
++ test $ac_count -gt 10 && break
++ done
++ rm -f conftest.in conftest.tmp conftest.nl conftest.out;;
++esac
++
++ $ac_path_SED_found && break 3
++ done
++ done
++ done
++IFS=$as_save_IFS
++ if test -z "$ac_cv_path_SED"; then
++ as_fn_error "no acceptable sed could be found in \$PATH" "$LINENO" 5
++ fi
++else
++ ac_cv_path_SED=$SED
++fi
++
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_path_SED" >&5
++$as_echo "$ac_cv_path_SED" >&6; }
++ SED="$ac_cv_path_SED"
++ rm -f conftest.sed
++
++test -z "$SED" && SED=sed
++Xsed="$SED -e 1s/^X//"
++
++
++
++
++
++
++
++
++
++
++
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for grep that handles long lines and -e" >&5
++$as_echo_n "checking for grep that handles long lines and -e... " >&6; }
++if test "${ac_cv_path_GREP+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test -z "$GREP"; then
++ ac_path_GREP_found=false
++ # Loop through the user's path and test for each of PROGNAME-LIST
++ as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH$PATH_SEPARATOR/usr/xpg4/bin
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ for ac_prog in grep ggrep; do
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ ac_path_GREP="$as_dir/$ac_prog$ac_exec_ext"
++ { test -f "$ac_path_GREP" && $as_test_x "$ac_path_GREP"; } || continue
++# Check for GNU ac_path_GREP and select it if it is found.
++ # Check for GNU $ac_path_GREP
++case `"$ac_path_GREP" --version 2>&1` in
++*GNU*)
++ ac_cv_path_GREP="$ac_path_GREP" ac_path_GREP_found=:;;
++*)
++ ac_count=0
++ $as_echo_n 0123456789 >"conftest.in"
++ while :
++ do
++ cat "conftest.in" "conftest.in" >"conftest.tmp"
++ mv "conftest.tmp" "conftest.in"
++ cp "conftest.in" "conftest.nl"
++ $as_echo 'GREP' >> "conftest.nl"
++ "$ac_path_GREP" -e 'GREP$' -e '-(cannot match)-' < "conftest.nl" >"conftest.out" 2>/dev/null || break
++ diff "conftest.out" "conftest.nl" >/dev/null 2>&1 || break
++ as_fn_arith $ac_count + 1 && ac_count=$as_val
++ if test $ac_count -gt ${ac_path_GREP_max-0}; then
++ # Best one so far, save it but keep looking for a better one
++ ac_cv_path_GREP="$ac_path_GREP"
++ ac_path_GREP_max=$ac_count
++ fi
++ # 10*(2^10) chars as input seems more than enough
++ test $ac_count -gt 10 && break
++ done
++ rm -f conftest.in conftest.tmp conftest.nl conftest.out;;
++esac
++
++ $ac_path_GREP_found && break 3
++ done
++ done
++ done
++IFS=$as_save_IFS
++ if test -z "$ac_cv_path_GREP"; then
++ as_fn_error "no acceptable grep could be found in $PATH$PATH_SEPARATOR/usr/xpg4/bin" "$LINENO" 5
++ fi
++else
++ ac_cv_path_GREP=$GREP
++fi
++
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_path_GREP" >&5
++$as_echo "$ac_cv_path_GREP" >&6; }
++ GREP="$ac_cv_path_GREP"
++
++
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for egrep" >&5
++$as_echo_n "checking for egrep... " >&6; }
++if test "${ac_cv_path_EGREP+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if echo a | $GREP -E '(a|b)' >/dev/null 2>&1
++ then ac_cv_path_EGREP="$GREP -E"
++ else
++ if test -z "$EGREP"; then
++ ac_path_EGREP_found=false
++ # Loop through the user's path and test for each of PROGNAME-LIST
++ as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH$PATH_SEPARATOR/usr/xpg4/bin
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ for ac_prog in egrep; do
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ ac_path_EGREP="$as_dir/$ac_prog$ac_exec_ext"
++ { test -f "$ac_path_EGREP" && $as_test_x "$ac_path_EGREP"; } || continue
++# Check for GNU ac_path_EGREP and select it if it is found.
++ # Check for GNU $ac_path_EGREP
++case `"$ac_path_EGREP" --version 2>&1` in
++*GNU*)
++ ac_cv_path_EGREP="$ac_path_EGREP" ac_path_EGREP_found=:;;
++*)
++ ac_count=0
++ $as_echo_n 0123456789 >"conftest.in"
++ while :
++ do
++ cat "conftest.in" "conftest.in" >"conftest.tmp"
++ mv "conftest.tmp" "conftest.in"
++ cp "conftest.in" "conftest.nl"
++ $as_echo 'EGREP' >> "conftest.nl"
++ "$ac_path_EGREP" 'EGREP$' < "conftest.nl" >"conftest.out" 2>/dev/null || break
++ diff "conftest.out" "conftest.nl" >/dev/null 2>&1 || break
++ as_fn_arith $ac_count + 1 && ac_count=$as_val
++ if test $ac_count -gt ${ac_path_EGREP_max-0}; then
++ # Best one so far, save it but keep looking for a better one
++ ac_cv_path_EGREP="$ac_path_EGREP"
++ ac_path_EGREP_max=$ac_count
++ fi
++ # 10*(2^10) chars as input seems more than enough
++ test $ac_count -gt 10 && break
++ done
++ rm -f conftest.in conftest.tmp conftest.nl conftest.out;;
++esac
++
++ $ac_path_EGREP_found && break 3
++ done
++ done
++ done
++IFS=$as_save_IFS
++ if test -z "$ac_cv_path_EGREP"; then
++ as_fn_error "no acceptable egrep could be found in $PATH$PATH_SEPARATOR/usr/xpg4/bin" "$LINENO" 5
++ fi
++else
++ ac_cv_path_EGREP=$EGREP
++fi
++
++ fi
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_path_EGREP" >&5
++$as_echo "$ac_cv_path_EGREP" >&6; }
++ EGREP="$ac_cv_path_EGREP"
++
++
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for fgrep" >&5
++$as_echo_n "checking for fgrep... " >&6; }
++if test "${ac_cv_path_FGREP+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if echo 'ab*c' | $GREP -F 'ab*c' >/dev/null 2>&1
++ then ac_cv_path_FGREP="$GREP -F"
++ else
++ if test -z "$FGREP"; then
++ ac_path_FGREP_found=false
++ # Loop through the user's path and test for each of PROGNAME-LIST
++ as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH$PATH_SEPARATOR/usr/xpg4/bin
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ for ac_prog in fgrep; do
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ ac_path_FGREP="$as_dir/$ac_prog$ac_exec_ext"
++ { test -f "$ac_path_FGREP" && $as_test_x "$ac_path_FGREP"; } || continue
++# Check for GNU ac_path_FGREP and select it if it is found.
++ # Check for GNU $ac_path_FGREP
++case `"$ac_path_FGREP" --version 2>&1` in
++*GNU*)
++ ac_cv_path_FGREP="$ac_path_FGREP" ac_path_FGREP_found=:;;
++*)
++ ac_count=0
++ $as_echo_n 0123456789 >"conftest.in"
++ while :
++ do
++ cat "conftest.in" "conftest.in" >"conftest.tmp"
++ mv "conftest.tmp" "conftest.in"
++ cp "conftest.in" "conftest.nl"
++ $as_echo 'FGREP' >> "conftest.nl"
++ "$ac_path_FGREP" FGREP < "conftest.nl" >"conftest.out" 2>/dev/null || break
++ diff "conftest.out" "conftest.nl" >/dev/null 2>&1 || break
++ as_fn_arith $ac_count + 1 && ac_count=$as_val
++ if test $ac_count -gt ${ac_path_FGREP_max-0}; then
++ # Best one so far, save it but keep looking for a better one
++ ac_cv_path_FGREP="$ac_path_FGREP"
++ ac_path_FGREP_max=$ac_count
++ fi
++ # 10*(2^10) chars as input seems more than enough
++ test $ac_count -gt 10 && break
++ done
++ rm -f conftest.in conftest.tmp conftest.nl conftest.out;;
++esac
++
++ $ac_path_FGREP_found && break 3
++ done
++ done
++ done
++IFS=$as_save_IFS
++ if test -z "$ac_cv_path_FGREP"; then
++ as_fn_error "no acceptable fgrep could be found in $PATH$PATH_SEPARATOR/usr/xpg4/bin" "$LINENO" 5
++ fi
++else
++ ac_cv_path_FGREP=$FGREP
++fi
++
++ fi
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_path_FGREP" >&5
++$as_echo "$ac_cv_path_FGREP" >&6; }
++ FGREP="$ac_cv_path_FGREP"
++
++
++test -z "$GREP" && GREP=grep
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++@%:@ Check whether --with-gnu-ld was given.
++if test "${with_gnu_ld+set}" = set; then :
++ withval=$with_gnu_ld; test "$withval" = no || with_gnu_ld=yes
++else
++ with_gnu_ld=no
++fi
++
++ac_prog=ld
++if test "$GCC" = yes; then
++ # Check if gcc -print-prog-name=ld gives a path.
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for ld used by $CC" >&5
++$as_echo_n "checking for ld used by $CC... " >&6; }
++ case $host in
++ *-*-mingw*)
++ # gcc leaves a trailing carriage return which upsets mingw
++ ac_prog=`($CC -print-prog-name=ld) 2>&5 | tr -d '\015'` ;;
++ *)
++ ac_prog=`($CC -print-prog-name=ld) 2>&5` ;;
++ esac
++ case $ac_prog in
++ # Accept absolute paths.
++ [\\/]* | ?:[\\/]*)
++ re_direlt='/[^/][^/]*/\.\./'
++ # Canonicalize the pathname of ld
++ ac_prog=`$ECHO "$ac_prog"| $SED 's%\\\\%/%g'`
++ while $ECHO "$ac_prog" | $GREP "$re_direlt" > /dev/null 2>&1; do
++ ac_prog=`$ECHO $ac_prog| $SED "s%$re_direlt%/%"`
++ done
++ test -z "$LD" && LD="$ac_prog"
++ ;;
++ "")
++ # If it fails, then pretend we aren't using GCC.
++ ac_prog=ld
++ ;;
++ *)
++ # If it is relative, then search for the first ld in PATH.
++ with_gnu_ld=unknown
++ ;;
++ esac
++elif test "$with_gnu_ld" = yes; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for GNU ld" >&5
++$as_echo_n "checking for GNU ld... " >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for non-GNU ld" >&5
++$as_echo_n "checking for non-GNU ld... " >&6; }
++fi
++if test "${lt_cv_path_LD+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test -z "$LD"; then
++ lt_save_ifs="$IFS"; IFS=$PATH_SEPARATOR
++ for ac_dir in $PATH; do
++ IFS="$lt_save_ifs"
++ test -z "$ac_dir" && ac_dir=.
++ if test -f "$ac_dir/$ac_prog" || test -f "$ac_dir/$ac_prog$ac_exeext"; then
++ lt_cv_path_LD="$ac_dir/$ac_prog"
++ # Check to see if the program is GNU ld. I'd rather use --version,
++ # but apparently some variants of GNU ld only accept -v.
++ # Break only if it was the GNU/non-GNU ld that we prefer.
++ case `"$lt_cv_path_LD" -v 2>&1 </dev/null` in
++ *GNU* | *'with BFD'*)
++ test "$with_gnu_ld" != no && break
++ ;;
++ *)
++ test "$with_gnu_ld" != yes && break
++ ;;
++ esac
++ fi
++ done
++ IFS="$lt_save_ifs"
++else
++ lt_cv_path_LD="$LD" # Let the user override the test with a path.
++fi
++fi
++
++LD="$lt_cv_path_LD"
++if test -n "$LD"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $LD" >&5
++$as_echo "$LD" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++test -z "$LD" && as_fn_error "no acceptable ld found in \$PATH" "$LINENO" 5
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking if the linker ($LD) is GNU ld" >&5
++$as_echo_n "checking if the linker ($LD) is GNU ld... " >&6; }
++if test "${lt_cv_prog_gnu_ld+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ # I'd rather use --version here, but apparently some GNU lds only accept -v.
++case `$LD -v 2>&1 </dev/null` in
++*GNU* | *'with BFD'*)
++ lt_cv_prog_gnu_ld=yes
++ ;;
++*)
++ lt_cv_prog_gnu_ld=no
++ ;;
++esac
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $lt_cv_prog_gnu_ld" >&5
++$as_echo "$lt_cv_prog_gnu_ld" >&6; }
++with_gnu_ld=$lt_cv_prog_gnu_ld
++
++
++
++
++
++
++
++
++
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for BSD- or MS-compatible name lister (nm)" >&5
++$as_echo_n "checking for BSD- or MS-compatible name lister (nm)... " >&6; }
++if test "${lt_cv_path_NM+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test -n "$NM"; then
++ # Let the user override the test.
++ lt_cv_path_NM="$NM"
++else
++ lt_nm_to_check="${ac_tool_prefix}nm"
++ if test -n "$ac_tool_prefix" && test "$build" = "$host"; then
++ lt_nm_to_check="$lt_nm_to_check nm"
++ fi
++ for lt_tmp_nm in $lt_nm_to_check; do
++ lt_save_ifs="$IFS"; IFS=$PATH_SEPARATOR
++ for ac_dir in $PATH /usr/ccs/bin/elf /usr/ccs/bin /usr/ucb /bin; do
++ IFS="$lt_save_ifs"
++ test -z "$ac_dir" && ac_dir=.
++ tmp_nm="$ac_dir/$lt_tmp_nm"
++ if test -f "$tmp_nm" || test -f "$tmp_nm$ac_exeext" ; then
++ # Check to see if the nm accepts a BSD-compat flag.
++ # Adding the `sed 1q' prevents false positives on HP-UX, which says:
++ # nm: unknown option "B" ignored
++ # Tru64's nm complains that /dev/null is an invalid object file
++ case `"$tmp_nm" -B /dev/null 2>&1 | sed '1q'` in
++ */dev/null* | *'Invalid file or object type'*)
++ lt_cv_path_NM="$tmp_nm -B"
++ break
++ ;;
++ *)
++ case `"$tmp_nm" -p /dev/null 2>&1 | sed '1q'` in
++ */dev/null*)
++ lt_cv_path_NM="$tmp_nm -p"
++ break
++ ;;
++ *)
++ lt_cv_path_NM=${lt_cv_path_NM="$tmp_nm"} # keep the first match, but
++ continue # so that we can try to find one that supports BSD flags
++ ;;
++ esac
++ ;;
++ esac
++ fi
++ done
++ IFS="$lt_save_ifs"
++ done
++ : ${lt_cv_path_NM=no}
++fi
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $lt_cv_path_NM" >&5
++$as_echo "$lt_cv_path_NM" >&6; }
++if test "$lt_cv_path_NM" != "no"; then
++ NM="$lt_cv_path_NM"
++else
++ # Didn't find any BSD compatible name lister, look for dumpbin.
++ if test -n "$ac_tool_prefix"; then
++ for ac_prog in "dumpbin -symbols" "link -dump -symbols"
++ do
++ # Extract the first word of "$ac_tool_prefix$ac_prog", so it can be a program name with args.
++set dummy $ac_tool_prefix$ac_prog; ac_word=$2
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
++$as_echo_n "checking for $ac_word... " >&6; }
++if test "${ac_cv_prog_DUMPBIN+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test -n "$DUMPBIN"; then
++ ac_cv_prog_DUMPBIN="$DUMPBIN" # Let the user override the test.
++else
++as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
++ ac_cv_prog_DUMPBIN="$ac_tool_prefix$ac_prog"
++ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
++ break 2
++ fi
++done
++ done
++IFS=$as_save_IFS
++
++fi
++fi
++DUMPBIN=$ac_cv_prog_DUMPBIN
++if test -n "$DUMPBIN"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $DUMPBIN" >&5
++$as_echo "$DUMPBIN" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++
++ test -n "$DUMPBIN" && break
++ done
++fi
++if test -z "$DUMPBIN"; then
++ ac_ct_DUMPBIN=$DUMPBIN
++ for ac_prog in "dumpbin -symbols" "link -dump -symbols"
++do
++ # Extract the first word of "$ac_prog", so it can be a program name with args.
++set dummy $ac_prog; ac_word=$2
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
++$as_echo_n "checking for $ac_word... " >&6; }
++if test "${ac_cv_prog_ac_ct_DUMPBIN+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test -n "$ac_ct_DUMPBIN"; then
++ ac_cv_prog_ac_ct_DUMPBIN="$ac_ct_DUMPBIN" # Let the user override the test.
++else
++as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
++ ac_cv_prog_ac_ct_DUMPBIN="$ac_prog"
++ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
++ break 2
++ fi
++done
++ done
++IFS=$as_save_IFS
++
++fi
++fi
++ac_ct_DUMPBIN=$ac_cv_prog_ac_ct_DUMPBIN
++if test -n "$ac_ct_DUMPBIN"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_ct_DUMPBIN" >&5
++$as_echo "$ac_ct_DUMPBIN" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++
++ test -n "$ac_ct_DUMPBIN" && break
++done
++
++ if test "x$ac_ct_DUMPBIN" = x; then
++ DUMPBIN=":"
++ else
++ case $cross_compiling:$ac_tool_warned in
++yes:)
++{ $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: using cross tools not prefixed with host triplet" >&5
++$as_echo "$as_me: WARNING: using cross tools not prefixed with host triplet" >&2;}
++ac_tool_warned=yes ;;
++esac
++ DUMPBIN=$ac_ct_DUMPBIN
++ fi
++fi
++
++
++ if test "$DUMPBIN" != ":"; then
++ NM="$DUMPBIN"
++ fi
++fi
++test -z "$NM" && NM=nm
++
++
++
++
++
++
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking the name lister ($NM) interface" >&5
++$as_echo_n "checking the name lister ($NM) interface... " >&6; }
++if test "${lt_cv_nm_interface+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ lt_cv_nm_interface="BSD nm"
++ echo "int some_variable = 0;" > conftest.$ac_ext
++ (eval echo "\"\$as_me:__oline__: $ac_compile\"" >&5)
++ (eval "$ac_compile" 2>conftest.err)
++ cat conftest.err >&5
++ (eval echo "\"\$as_me:__oline__: $NM \\\"conftest.$ac_objext\\\"\"" >&5)
++ (eval "$NM \"conftest.$ac_objext\"" 2>conftest.err > conftest.out)
++ cat conftest.err >&5
++ (eval echo "\"\$as_me:__oline__: output\"" >&5)
++ cat conftest.out >&5
++ if $GREP 'External.*some_variable' conftest.out > /dev/null; then
++ lt_cv_nm_interface="MS dumpbin"
++ fi
++ rm -f conftest*
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $lt_cv_nm_interface" >&5
++$as_echo "$lt_cv_nm_interface" >&6; }
++
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking whether ln -s works" >&5
++$as_echo_n "checking whether ln -s works... " >&6; }
++LN_S=$as_ln_s
++if test "$LN_S" = "ln -s"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
++$as_echo "yes" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no, using $LN_S" >&5
++$as_echo "no, using $LN_S" >&6; }
++fi
++
++# find the maximum length of command line arguments
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking the maximum length of command line arguments" >&5
++$as_echo_n "checking the maximum length of command line arguments... " >&6; }
++if test "${lt_cv_sys_max_cmd_len+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ i=0
++ teststring="ABCD"
++
++ case $build_os in
++ msdosdjgpp*)
++ # On DJGPP, this test can blow up pretty badly due to problems in libc
++ # (any single argument exceeding 2000 bytes causes a buffer overrun
++ # during glob expansion). Even if it were fixed, the result of this
++ # check would be larger than it should be.
++ lt_cv_sys_max_cmd_len=12288; # 12K is about right
++ ;;
++
++ gnu*)
++ # Under GNU Hurd, this test is not required because there is
++ # no limit to the length of command line arguments.
++ # Libtool will interpret -1 as no limit whatsoever
++ lt_cv_sys_max_cmd_len=-1;
++ ;;
++
++ cygwin* | mingw* | cegcc*)
++ # On Win9x/ME, this test blows up -- it succeeds, but takes
++ # about 5 minutes as the teststring grows exponentially.
++ # Worse, since 9x/ME are not pre-emptively multitasking,
++ # you end up with a "frozen" computer, even though with patience
++ # the test eventually succeeds (with a max line length of 256k).
++ # Instead, let's just punt: use the minimum linelength reported by
++ # all of the supported platforms: 8192 (on NT/2K/XP).
++ lt_cv_sys_max_cmd_len=8192;
++ ;;
++
++ amigaos*)
++ # On AmigaOS with pdksh, this test takes hours, literally.
++ # So we just punt and use a minimum line length of 8192.
++ lt_cv_sys_max_cmd_len=8192;
++ ;;
++
++ netbsd* | freebsd* | openbsd* | darwin* | dragonfly*)
++ # This has been around since 386BSD, at least. Likely further.
++ if test -x /sbin/sysctl; then
++ lt_cv_sys_max_cmd_len=`/sbin/sysctl -n kern.argmax`
++ elif test -x /usr/sbin/sysctl; then
++ lt_cv_sys_max_cmd_len=`/usr/sbin/sysctl -n kern.argmax`
++ else
++ lt_cv_sys_max_cmd_len=65536 # usable default for all BSDs
++ fi
++ # And add a safety zone
++ lt_cv_sys_max_cmd_len=`expr $lt_cv_sys_max_cmd_len \/ 4`
++ lt_cv_sys_max_cmd_len=`expr $lt_cv_sys_max_cmd_len \* 3`
++ ;;
++
++ interix*)
++ # We know the value 262144 and hardcode it with a safety zone (like BSD)
++ lt_cv_sys_max_cmd_len=196608
++ ;;
++
++ osf*)
++ # Dr. Hans Ekkehard Plesser reports seeing a kernel panic running configure
++ # due to this test when exec_disable_arg_limit is 1 on Tru64. It is not
++ # nice to cause kernel panics so lets avoid the loop below.
++ # First set a reasonable default.
++ lt_cv_sys_max_cmd_len=16384
++ #
++ if test -x /sbin/sysconfig; then
++ case `/sbin/sysconfig -q proc exec_disable_arg_limit` in
++ *1*) lt_cv_sys_max_cmd_len=-1 ;;
++ esac
++ fi
++ ;;
++ sco3.2v5*)
++ lt_cv_sys_max_cmd_len=102400
++ ;;
++ sysv5* | sco5v6* | sysv4.2uw2*)
++ kargmax=`grep ARG_MAX /etc/conf/cf.d/stune 2>/dev/null`
++ if test -n "$kargmax"; then
++ lt_cv_sys_max_cmd_len=`echo $kargmax | sed 's/.*[ ]//'`
++ else
++ lt_cv_sys_max_cmd_len=32768
++ fi
++ ;;
++ *)
++ lt_cv_sys_max_cmd_len=`(getconf ARG_MAX) 2> /dev/null`
++ if test -n "$lt_cv_sys_max_cmd_len"; then
++ lt_cv_sys_max_cmd_len=`expr $lt_cv_sys_max_cmd_len \/ 4`
++ lt_cv_sys_max_cmd_len=`expr $lt_cv_sys_max_cmd_len \* 3`
++ else
++ # Make teststring a little bigger before we do anything with it.
++ # a 1K string should be a reasonable start.
++ for i in 1 2 3 4 5 6 7 8 ; do
++ teststring=$teststring$teststring
++ done
++ SHELL=${SHELL-${CONFIG_SHELL-/bin/sh}}
++ # If test is not a shell built-in, we'll probably end up computing a
++ # maximum length that is only half of the actual maximum length, but
++ # we can't tell.
++ while { test "X"`$SHELL $0 --fallback-echo "X$teststring$teststring" 2>/dev/null` \
++ = "XX$teststring$teststring"; } >/dev/null 2>&1 &&
++ test $i != 17 # 1/2 MB should be enough
++ do
++ i=`expr $i + 1`
++ teststring=$teststring$teststring
++ done
++ # Only check the string length outside the loop.
++ lt_cv_sys_max_cmd_len=`expr "X$teststring" : ".*" 2>&1`
++ teststring=
++ # Add a significant safety factor because C++ compilers can tack on
++ # massive amounts of additional arguments before passing them to the
++ # linker. It appears as though 1/2 is a usable value.
++ lt_cv_sys_max_cmd_len=`expr $lt_cv_sys_max_cmd_len \/ 2`
++ fi
++ ;;
++ esac
++
++fi
++
++if test -n $lt_cv_sys_max_cmd_len ; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $lt_cv_sys_max_cmd_len" >&5
++$as_echo "$lt_cv_sys_max_cmd_len" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: none" >&5
++$as_echo "none" >&6; }
++fi
++max_cmd_len=$lt_cv_sys_max_cmd_len
++
++
++
++
++
++
++: ${CP="cp -f"}
++: ${MV="mv -f"}
++: ${RM="rm -f"}
++
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking whether the shell understands some XSI constructs" >&5
++$as_echo_n "checking whether the shell understands some XSI constructs... " >&6; }
++# Try some XSI features
++xsi_shell=no
++( _lt_dummy="a/b/c"
++ test "${_lt_dummy##*/},${_lt_dummy%/*},"${_lt_dummy%"$_lt_dummy"}, \
++ = c,a/b,, \
++ && eval 'test $(( 1 + 1 )) -eq 2 \
++ && test "${#_lt_dummy}" -eq 5' ) >/dev/null 2>&1 \
++ && xsi_shell=yes
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $xsi_shell" >&5
++$as_echo "$xsi_shell" >&6; }
++
++
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking whether the shell understands \"+=\"" >&5
++$as_echo_n "checking whether the shell understands \"+=\"... " >&6; }
++lt_shell_append=no
++( foo=bar; set foo baz; eval "$1+=\$2" && test "$foo" = barbaz ) \
++ >/dev/null 2>&1 \
++ && lt_shell_append=yes
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $lt_shell_append" >&5
++$as_echo "$lt_shell_append" >&6; }
++
++
++if ( (MAIL=60; unset MAIL) || exit) >/dev/null 2>&1; then
++ lt_unset=unset
++else
++ lt_unset=false
++fi
++
++
++
++
++
++# test EBCDIC or ASCII
++case `echo X|tr X '\101'` in
++ A) # ASCII based system
++ # \n is not interpreted correctly by Solaris 8 /usr/ucb/tr
++ lt_SP2NL='tr \040 \012'
++ lt_NL2SP='tr \015\012 \040\040'
++ ;;
++ *) # EBCDIC based system
++ lt_SP2NL='tr \100 \n'
++ lt_NL2SP='tr \r\n \100\100'
++ ;;
++esac
++
++
++
++
++
++
++
++
++
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $LD option to reload object files" >&5
++$as_echo_n "checking for $LD option to reload object files... " >&6; }
++if test "${lt_cv_ld_reload_flag+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ lt_cv_ld_reload_flag='-r'
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $lt_cv_ld_reload_flag" >&5
++$as_echo "$lt_cv_ld_reload_flag" >&6; }
++reload_flag=$lt_cv_ld_reload_flag
++case $reload_flag in
++"" | " "*) ;;
++*) reload_flag=" $reload_flag" ;;
++esac
++reload_cmds='$LD$reload_flag -o $output$reload_objs'
++case $host_os in
++ darwin*)
++ if test "$GCC" = yes; then
++ reload_cmds='$LTCC $LTCFLAGS -nostdlib ${wl}-r -o $output$reload_objs'
++ else
++ reload_cmds='$LD$reload_flag -o $output$reload_objs'
++ fi
++ ;;
++esac
++
++
++
++
++
++
++
++
++
++if test -n "$ac_tool_prefix"; then
++ # Extract the first word of "${ac_tool_prefix}objdump", so it can be a program name with args.
++set dummy ${ac_tool_prefix}objdump; ac_word=$2
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
++$as_echo_n "checking for $ac_word... " >&6; }
++if test "${ac_cv_prog_OBJDUMP+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test -n "$OBJDUMP"; then
++ ac_cv_prog_OBJDUMP="$OBJDUMP" # Let the user override the test.
++else
++as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
++ ac_cv_prog_OBJDUMP="${ac_tool_prefix}objdump"
++ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
++ break 2
++ fi
++done
++ done
++IFS=$as_save_IFS
++
++fi
++fi
++OBJDUMP=$ac_cv_prog_OBJDUMP
++if test -n "$OBJDUMP"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $OBJDUMP" >&5
++$as_echo "$OBJDUMP" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++
++fi
++if test -z "$ac_cv_prog_OBJDUMP"; then
++ ac_ct_OBJDUMP=$OBJDUMP
++ # Extract the first word of "objdump", so it can be a program name with args.
++set dummy objdump; ac_word=$2
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
++$as_echo_n "checking for $ac_word... " >&6; }
++if test "${ac_cv_prog_ac_ct_OBJDUMP+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test -n "$ac_ct_OBJDUMP"; then
++ ac_cv_prog_ac_ct_OBJDUMP="$ac_ct_OBJDUMP" # Let the user override the test.
++else
++as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
++ ac_cv_prog_ac_ct_OBJDUMP="objdump"
++ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
++ break 2
++ fi
++done
++ done
++IFS=$as_save_IFS
++
++fi
++fi
++ac_ct_OBJDUMP=$ac_cv_prog_ac_ct_OBJDUMP
++if test -n "$ac_ct_OBJDUMP"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_ct_OBJDUMP" >&5
++$as_echo "$ac_ct_OBJDUMP" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++ if test "x$ac_ct_OBJDUMP" = x; then
++ OBJDUMP="false"
++ else
++ case $cross_compiling:$ac_tool_warned in
++yes:)
++{ $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: using cross tools not prefixed with host triplet" >&5
++$as_echo "$as_me: WARNING: using cross tools not prefixed with host triplet" >&2;}
++ac_tool_warned=yes ;;
++esac
++ OBJDUMP=$ac_ct_OBJDUMP
++ fi
++else
++ OBJDUMP="$ac_cv_prog_OBJDUMP"
++fi
++
++test -z "$OBJDUMP" && OBJDUMP=objdump
++
++
++
++
++
++
++
++
++
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking how to recognize dependent libraries" >&5
++$as_echo_n "checking how to recognize dependent libraries... " >&6; }
++if test "${lt_cv_deplibs_check_method+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ lt_cv_file_magic_cmd='$MAGIC_CMD'
++lt_cv_file_magic_test_file=
++lt_cv_deplibs_check_method='unknown'
++# Need to set the preceding variable on all platforms that support
++# interlibrary dependencies.
++# 'none' -- dependencies not supported.
++# `unknown' -- same as none, but documents that we really don't know.
++# 'pass_all' -- all dependencies passed with no checks.
++# 'test_compile' -- check by making test program.
++# 'file_magic [[regex]]' -- check by looking for files in library path
++# which responds to the $file_magic_cmd with a given extended regex.
++# If you have `file' or equivalent on your system and you're not sure
++# whether `pass_all' will *always* work, you probably want this one.
++
++case $host_os in
++aix[4-9]*)
++ lt_cv_deplibs_check_method=pass_all
++ ;;
++
++beos*)
++ lt_cv_deplibs_check_method=pass_all
++ ;;
++
++bsdi[45]*)
++ lt_cv_deplibs_check_method='file_magic ELF [0-9][0-9]*-bit [ML]SB (shared object|dynamic lib)'
++ lt_cv_file_magic_cmd='/usr/bin/file -L'
++ lt_cv_file_magic_test_file=/shlib/libc.so
++ ;;
++
++cygwin*)
++ # func_win32_libid is a shell function defined in ltmain.sh
++ lt_cv_deplibs_check_method='file_magic ^x86 archive import|^x86 DLL'
++ lt_cv_file_magic_cmd='func_win32_libid'
++ ;;
++
++mingw* | pw32*)
++ # Base MSYS/MinGW do not provide the 'file' command needed by
++ # func_win32_libid shell function, so use a weaker test based on 'objdump',
++ # unless we find 'file', for example because we are cross-compiling.
++ if ( file / ) >/dev/null 2>&1; then
++ lt_cv_deplibs_check_method='file_magic ^x86 archive import|^x86 DLL'
++ lt_cv_file_magic_cmd='func_win32_libid'
++ else
++ lt_cv_deplibs_check_method='file_magic file format pei*-i386(.*architecture: i386)?'
++ lt_cv_file_magic_cmd='$OBJDUMP -f'
++ fi
++ ;;
++
++cegcc)
++ # use the weaker test based on 'objdump'. See mingw*.
++ lt_cv_deplibs_check_method='file_magic file format pe-arm-.*little(.*architecture: arm)?'
++ lt_cv_file_magic_cmd='$OBJDUMP -f'
++ ;;
++
++darwin* | rhapsody*)
++ lt_cv_deplibs_check_method=pass_all
++ ;;
++
++freebsd* | dragonfly*)
++ if echo __ELF__ | $CC -E - | $GREP __ELF__ > /dev/null; then
++ case $host_cpu in
++ i*86 )
++ # Not sure whether the presence of OpenBSD here was a mistake.
++ # Let's accept both of them until this is cleared up.
++ lt_cv_deplibs_check_method='file_magic (FreeBSD|OpenBSD|DragonFly)/i[3-9]86 (compact )?demand paged shared library'
++ lt_cv_file_magic_cmd=/usr/bin/file
++ lt_cv_file_magic_test_file=`echo /usr/lib/libc.so.*`
++ ;;
++ esac
++ else
++ lt_cv_deplibs_check_method=pass_all
++ fi
++ ;;
++
++gnu*)
++ lt_cv_deplibs_check_method=pass_all
++ ;;
++
++hpux10.20* | hpux11*)
++ lt_cv_file_magic_cmd=/usr/bin/file
++ case $host_cpu in
++ ia64*)
++ lt_cv_deplibs_check_method='file_magic (s[0-9][0-9][0-9]|ELF-[0-9][0-9]) shared object file - IA64'
++ lt_cv_file_magic_test_file=/usr/lib/hpux32/libc.so
++ ;;
++ hppa*64*)
++ lt_cv_deplibs_check_method='file_magic (s[0-9][0-9][0-9]|ELF-[0-9][0-9]) shared object file - PA-RISC [0-9].[0-9]'
++ lt_cv_file_magic_test_file=/usr/lib/pa20_64/libc.sl
++ ;;
++ *)
++ lt_cv_deplibs_check_method='file_magic (s[0-9][0-9][0-9]|PA-RISC[0-9].[0-9]) shared library'
++ lt_cv_file_magic_test_file=/usr/lib/libc.sl
++ ;;
++ esac
++ ;;
++
++interix[3-9]*)
++ # PIC code is broken on Interix 3.x, that's why |\.a not |_pic\.a here
++ lt_cv_deplibs_check_method='match_pattern /lib[^/]+(\.so|\.a)$'
++ ;;
++
++irix5* | irix6* | nonstopux*)
++ case $LD in
++ *-32|*"-32 ") libmagic=32-bit;;
++ *-n32|*"-n32 ") libmagic=N32;;
++ *-64|*"-64 ") libmagic=64-bit;;
++ *) libmagic=never-match;;
++ esac
++ lt_cv_deplibs_check_method=pass_all
++ ;;
++
++# This must be Linux ELF.
++linux* | k*bsd*-gnu)
++ lt_cv_deplibs_check_method=pass_all
++ ;;
++
++netbsd*)
++ if echo __ELF__ | $CC -E - | $GREP __ELF__ > /dev/null; then
++ lt_cv_deplibs_check_method='match_pattern /lib[^/]+(\.so\.[0-9]+\.[0-9]+|_pic\.a)$'
++ else
++ lt_cv_deplibs_check_method='match_pattern /lib[^/]+(\.so|_pic\.a)$'
++ fi
++ ;;
++
++newos6*)
++ lt_cv_deplibs_check_method='file_magic ELF [0-9][0-9]*-bit [ML]SB (executable|dynamic lib)'
++ lt_cv_file_magic_cmd=/usr/bin/file
++ lt_cv_file_magic_test_file=/usr/lib/libnls.so
++ ;;
++
++*nto* | *qnx*)
++ lt_cv_deplibs_check_method=pass_all
++ ;;
++
++openbsd*)
++ if test -z "`echo __ELF__ | $CC -E - | $GREP __ELF__`" || test "$host_os-$host_cpu" = "openbsd2.8-powerpc"; then
++ lt_cv_deplibs_check_method='match_pattern /lib[^/]+(\.so\.[0-9]+\.[0-9]+|\.so|_pic\.a)$'
++ else
++ lt_cv_deplibs_check_method='match_pattern /lib[^/]+(\.so\.[0-9]+\.[0-9]+|_pic\.a)$'
++ fi
++ ;;
++
++osf3* | osf4* | osf5*)
++ lt_cv_deplibs_check_method=pass_all
++ ;;
++
++rdos*)
++ lt_cv_deplibs_check_method=pass_all
++ ;;
++
++solaris*)
++ lt_cv_deplibs_check_method=pass_all
++ ;;
++
++sysv5* | sco3.2v5* | sco5v6* | unixware* | OpenUNIX* | sysv4*uw2*)
++ lt_cv_deplibs_check_method=pass_all
++ ;;
++
++sysv4 | sysv4.3*)
++ case $host_vendor in
++ motorola)
++ lt_cv_deplibs_check_method='file_magic ELF [0-9][0-9]*-bit [ML]SB (shared object|dynamic lib) M[0-9][0-9]* Version [0-9]'
++ lt_cv_file_magic_test_file=`echo /usr/lib/libc.so*`
++ ;;
++ ncr)
++ lt_cv_deplibs_check_method=pass_all
++ ;;
++ sequent)
++ lt_cv_file_magic_cmd='/bin/file'
++ lt_cv_deplibs_check_method='file_magic ELF [0-9][0-9]*-bit [LM]SB (shared object|dynamic lib )'
++ ;;
++ sni)
++ lt_cv_file_magic_cmd='/bin/file'
++ lt_cv_deplibs_check_method="file_magic ELF [0-9][0-9]*-bit [LM]SB dynamic lib"
++ lt_cv_file_magic_test_file=/lib/libc.so
++ ;;
++ siemens)
++ lt_cv_deplibs_check_method=pass_all
++ ;;
++ pc)
++ lt_cv_deplibs_check_method=pass_all
++ ;;
++ esac
++ ;;
++
++tpf*)
++ lt_cv_deplibs_check_method=pass_all
++ ;;
++esac
++
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $lt_cv_deplibs_check_method" >&5
++$as_echo "$lt_cv_deplibs_check_method" >&6; }
++file_magic_cmd=$lt_cv_file_magic_cmd
++deplibs_check_method=$lt_cv_deplibs_check_method
++test -z "$deplibs_check_method" && deplibs_check_method=unknown
++
++
++
++
++
++
++
++
++
++
++
++
++if test -n "$ac_tool_prefix"; then
++ # Extract the first word of "${ac_tool_prefix}ar", so it can be a program name with args.
++set dummy ${ac_tool_prefix}ar; ac_word=$2
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
++$as_echo_n "checking for $ac_word... " >&6; }
++if test "${ac_cv_prog_AR+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test -n "$AR"; then
++ ac_cv_prog_AR="$AR" # Let the user override the test.
++else
++as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
++ ac_cv_prog_AR="${ac_tool_prefix}ar"
++ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
++ break 2
++ fi
++done
++ done
++IFS=$as_save_IFS
++
++fi
++fi
++AR=$ac_cv_prog_AR
++if test -n "$AR"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $AR" >&5
++$as_echo "$AR" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++
++fi
++if test -z "$ac_cv_prog_AR"; then
++ ac_ct_AR=$AR
++ # Extract the first word of "ar", so it can be a program name with args.
++set dummy ar; ac_word=$2
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
++$as_echo_n "checking for $ac_word... " >&6; }
++if test "${ac_cv_prog_ac_ct_AR+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test -n "$ac_ct_AR"; then
++ ac_cv_prog_ac_ct_AR="$ac_ct_AR" # Let the user override the test.
++else
++as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
++ ac_cv_prog_ac_ct_AR="ar"
++ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
++ break 2
++ fi
++done
++ done
++IFS=$as_save_IFS
++
++fi
++fi
++ac_ct_AR=$ac_cv_prog_ac_ct_AR
++if test -n "$ac_ct_AR"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_ct_AR" >&5
++$as_echo "$ac_ct_AR" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++ if test "x$ac_ct_AR" = x; then
++ AR="false"
++ else
++ case $cross_compiling:$ac_tool_warned in
++yes:)
++{ $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: using cross tools not prefixed with host triplet" >&5
++$as_echo "$as_me: WARNING: using cross tools not prefixed with host triplet" >&2;}
++ac_tool_warned=yes ;;
++esac
++ AR=$ac_ct_AR
++ fi
++else
++ AR="$ac_cv_prog_AR"
++fi
++
++test -z "$AR" && AR=ar
++test -z "$AR_FLAGS" && AR_FLAGS=cru
++
++
++
++
++
++
++
++
++
++
++
++if test -n "$ac_tool_prefix"; then
++ # Extract the first word of "${ac_tool_prefix}strip", so it can be a program name with args.
++set dummy ${ac_tool_prefix}strip; ac_word=$2
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
++$as_echo_n "checking for $ac_word... " >&6; }
++if test "${ac_cv_prog_STRIP+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test -n "$STRIP"; then
++ ac_cv_prog_STRIP="$STRIP" # Let the user override the test.
++else
++as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
++ ac_cv_prog_STRIP="${ac_tool_prefix}strip"
++ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
++ break 2
++ fi
++done
++ done
++IFS=$as_save_IFS
++
++fi
++fi
++STRIP=$ac_cv_prog_STRIP
++if test -n "$STRIP"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $STRIP" >&5
++$as_echo "$STRIP" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++
++fi
++if test -z "$ac_cv_prog_STRIP"; then
++ ac_ct_STRIP=$STRIP
++ # Extract the first word of "strip", so it can be a program name with args.
++set dummy strip; ac_word=$2
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
++$as_echo_n "checking for $ac_word... " >&6; }
++if test "${ac_cv_prog_ac_ct_STRIP+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test -n "$ac_ct_STRIP"; then
++ ac_cv_prog_ac_ct_STRIP="$ac_ct_STRIP" # Let the user override the test.
++else
++as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
++ ac_cv_prog_ac_ct_STRIP="strip"
++ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
++ break 2
++ fi
++done
++ done
++IFS=$as_save_IFS
++
++fi
++fi
++ac_ct_STRIP=$ac_cv_prog_ac_ct_STRIP
++if test -n "$ac_ct_STRIP"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_ct_STRIP" >&5
++$as_echo "$ac_ct_STRIP" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++ if test "x$ac_ct_STRIP" = x; then
++ STRIP=":"
++ else
++ case $cross_compiling:$ac_tool_warned in
++yes:)
++{ $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: using cross tools not prefixed with host triplet" >&5
++$as_echo "$as_me: WARNING: using cross tools not prefixed with host triplet" >&2;}
++ac_tool_warned=yes ;;
++esac
++ STRIP=$ac_ct_STRIP
++ fi
++else
++ STRIP="$ac_cv_prog_STRIP"
++fi
++
++test -z "$STRIP" && STRIP=:
++
++
++
++
++
++
++if test -n "$ac_tool_prefix"; then
++ # Extract the first word of "${ac_tool_prefix}ranlib", so it can be a program name with args.
++set dummy ${ac_tool_prefix}ranlib; ac_word=$2
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
++$as_echo_n "checking for $ac_word... " >&6; }
++if test "${ac_cv_prog_RANLIB+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test -n "$RANLIB"; then
++ ac_cv_prog_RANLIB="$RANLIB" # Let the user override the test.
++else
++as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
++ ac_cv_prog_RANLIB="${ac_tool_prefix}ranlib"
++ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
++ break 2
++ fi
++done
++ done
++IFS=$as_save_IFS
++
++fi
++fi
++RANLIB=$ac_cv_prog_RANLIB
++if test -n "$RANLIB"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $RANLIB" >&5
++$as_echo "$RANLIB" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++
++fi
++if test -z "$ac_cv_prog_RANLIB"; then
++ ac_ct_RANLIB=$RANLIB
++ # Extract the first word of "ranlib", so it can be a program name with args.
++set dummy ranlib; ac_word=$2
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
++$as_echo_n "checking for $ac_word... " >&6; }
++if test "${ac_cv_prog_ac_ct_RANLIB+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test -n "$ac_ct_RANLIB"; then
++ ac_cv_prog_ac_ct_RANLIB="$ac_ct_RANLIB" # Let the user override the test.
++else
++as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
++ ac_cv_prog_ac_ct_RANLIB="ranlib"
++ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
++ break 2
++ fi
++done
++ done
++IFS=$as_save_IFS
++
++fi
++fi
++ac_ct_RANLIB=$ac_cv_prog_ac_ct_RANLIB
++if test -n "$ac_ct_RANLIB"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_ct_RANLIB" >&5
++$as_echo "$ac_ct_RANLIB" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++ if test "x$ac_ct_RANLIB" = x; then
++ RANLIB=":"
++ else
++ case $cross_compiling:$ac_tool_warned in
++yes:)
++{ $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: using cross tools not prefixed with host triplet" >&5
++$as_echo "$as_me: WARNING: using cross tools not prefixed with host triplet" >&2;}
++ac_tool_warned=yes ;;
++esac
++ RANLIB=$ac_ct_RANLIB
++ fi
++else
++ RANLIB="$ac_cv_prog_RANLIB"
++fi
++
++test -z "$RANLIB" && RANLIB=:
++
++
++
++
++
++
++# Determine commands to create old-style static archives.
++old_archive_cmds='$AR $AR_FLAGS $oldlib$oldobjs'
++old_postinstall_cmds='chmod 644 $oldlib'
++old_postuninstall_cmds=
++
++if test -n "$RANLIB"; then
++ case $host_os in
++ openbsd*)
++ old_postinstall_cmds="$old_postinstall_cmds~\$RANLIB -t \$oldlib"
++ ;;
++ *)
++ old_postinstall_cmds="$old_postinstall_cmds~\$RANLIB \$oldlib"
++ ;;
++ esac
++ old_archive_cmds="$old_archive_cmds~\$RANLIB \$oldlib"
++fi
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++# If no C compiler was specified, use CC.
++LTCC=${LTCC-"$CC"}
++
++# If no C compiler flags were specified, use CFLAGS.
++LTCFLAGS=${LTCFLAGS-"$CFLAGS"}
++
++# Allow CC to be a program name with arguments.
++compiler=$CC
++
++
++# Check for command to grab the raw symbol name followed by C symbol from nm.
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking command to parse $NM output from $compiler object" >&5
++$as_echo_n "checking command to parse $NM output from $compiler object... " >&6; }
++if test "${lt_cv_sys_global_symbol_pipe+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++
++# These are sane defaults that work on at least a few old systems.
++# [They come from Ultrix. What could be older than Ultrix?!! ;)]
++
++# Character class describing NM global symbol codes.
++symcode='[BCDEGRST]'
++
++# Regexp to match symbols that can be accessed directly from C.
++sympat='\([_A-Za-z][_A-Za-z0-9]*\)'
++
++# Define system-specific variables.
++case $host_os in
++aix*)
++ symcode='[BCDT]'
++ ;;
++cygwin* | mingw* | pw32* | cegcc*)
++ symcode='[ABCDGISTW]'
++ ;;
++hpux*)
++ if test "$host_cpu" = ia64; then
++ symcode='[ABCDEGRST]'
++ fi
++ ;;
++irix* | nonstopux*)
++ symcode='[BCDEGRST]'
++ ;;
++osf*)
++ symcode='[BCDEGQRST]'
++ ;;
++solaris*)
++ symcode='[BDRT]'
++ ;;
++sco3.2v5*)
++ symcode='[DT]'
++ ;;
++sysv4.2uw2*)
++ symcode='[DT]'
++ ;;
++sysv5* | sco5v6* | unixware* | OpenUNIX*)
++ symcode='[ABDT]'
++ ;;
++sysv4)
++ symcode='[DFNSTU]'
++ ;;
++esac
++
++# If we're using GNU nm, then use its standard symbol codes.
++case `$NM -V 2>&1` in
++*GNU* | *'with BFD'*)
++ symcode='[ABCDGIRSTW]' ;;
++esac
++
++# Transform an extracted symbol line into a proper C declaration.
++# Some systems (esp. on ia64) link data and code symbols differently,
++# so use this general approach.
++lt_cv_sys_global_symbol_to_cdecl="sed -n -e 's/^T .* \(.*\)$/extern int \1();/p' -e 's/^$symcode* .* \(.*\)$/extern char \1;/p'"
++
++# Transform an extracted symbol line into symbol name and symbol address
++lt_cv_sys_global_symbol_to_c_name_address="sed -n -e 's/^: \([^ ]*\) $/ {\\\"\1\\\", (void *) 0},/p' -e 's/^$symcode* \([^ ]*\) \([^ ]*\)$/ {\"\2\", (void *) \&\2},/p'"
++lt_cv_sys_global_symbol_to_c_name_address_lib_prefix="sed -n -e 's/^: \([^ ]*\) $/ {\\\"\1\\\", (void *) 0},/p' -e 's/^$symcode* \([^ ]*\) \(lib[^ ]*\)$/ {\"\2\", (void *) \&\2},/p' -e 's/^$symcode* \([^ ]*\) \([^ ]*\)$/ {\"lib\2\", (void *) \&\2},/p'"
++
++# Handle CRLF in mingw tool chain
++opt_cr=
++case $build_os in
++mingw*)
++ opt_cr=`$ECHO 'x\{0,1\}' | tr x '\015'` # option cr in regexp
++ ;;
++esac
++
++# Try without a prefix underscore, then with it.
++for ac_symprfx in "" "_"; do
++
++ # Transform symcode, sympat, and symprfx into a raw symbol and a C symbol.
++ symxfrm="\\1 $ac_symprfx\\2 \\2"
++
++ # Write the raw and C identifiers.
++ if test "$lt_cv_nm_interface" = "MS dumpbin"; then
++ # Fake it for dumpbin and say T for any non-static function
++ # and D for any global variable.
++ # Also find C++ and __fastcall symbols from MSVC++,
++ # which start with @ or ?.
++ lt_cv_sys_global_symbol_pipe="$AWK '"\
++" {last_section=section; section=\$ 3};"\
++" /Section length .*#relocs.*(pick any)/{hide[last_section]=1};"\
++" \$ 0!~/External *\|/{next};"\
++" / 0+ UNDEF /{next}; / UNDEF \([^|]\)*()/{next};"\
++" {if(hide[section]) next};"\
++" {f=0}; \$ 0~/\(\).*\|/{f=1}; {printf f ? \"T \" : \"D \"};"\
++" {split(\$ 0, a, /\||\r/); split(a[2], s)};"\
++" s[1]~/^[@?]/{print s[1], s[1]; next};"\
++" s[1]~prfx {split(s[1],t,\"@\"); print t[1], substr(t[1],length(prfx))}"\
++" ' prfx=^$ac_symprfx"
++ else
++ lt_cv_sys_global_symbol_pipe="sed -n -e 's/^.*[ ]\($symcode$symcode*\)[ ][ ]*$ac_symprfx$sympat$opt_cr$/$symxfrm/p'"
++ fi
++
++ # Check to see that the pipe works correctly.
++ pipe_works=no
++
++ rm -f conftest*
++ cat > conftest.$ac_ext <<_LT_EOF
++#ifdef __cplusplus
++extern "C" {
++#endif
++char nm_test_var;
++void nm_test_func(void);
++void nm_test_func(void){}
++#ifdef __cplusplus
++}
++#endif
++int main(){nm_test_var='a';nm_test_func();return(0);}
++_LT_EOF
++
++ if { { eval echo "\"\$as_me\":${as_lineno-$LINENO}: \"$ac_compile\""; } >&5
++ (eval $ac_compile) 2>&5
++ ac_status=$?
++ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
++ test $ac_status = 0; }; then
++ # Now try to grab the symbols.
++ nlist=conftest.nm
++ if { { eval echo "\"\$as_me\":${as_lineno-$LINENO}: \"$NM conftest.$ac_objext \| $lt_cv_sys_global_symbol_pipe \> $nlist\""; } >&5
++ (eval $NM conftest.$ac_objext \| $lt_cv_sys_global_symbol_pipe \> $nlist) 2>&5
++ ac_status=$?
++ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
++ test $ac_status = 0; } && test -s "$nlist"; then
++ # Try sorting and uniquifying the output.
++ if sort "$nlist" | uniq > "$nlist"T; then
++ mv -f "$nlist"T "$nlist"
++ else
++ rm -f "$nlist"T
++ fi
++
++ # Make sure that we snagged all the symbols we need.
++ if $GREP ' nm_test_var$' "$nlist" >/dev/null; then
++ if $GREP ' nm_test_func$' "$nlist" >/dev/null; then
++ cat <<_LT_EOF > conftest.$ac_ext
++#ifdef __cplusplus
++extern "C" {
++#endif
++
++_LT_EOF
++ # Now generate the symbol file.
++ eval "$lt_cv_sys_global_symbol_to_cdecl"' < "$nlist" | $GREP -v main >> conftest.$ac_ext'
++
++ cat <<_LT_EOF >> conftest.$ac_ext
++
++/* The mapping between symbol names and symbols. */
++const struct {
++ const char *name;
++ void *address;
++}
++lt__PROGRAM__LTX_preloaded_symbols[] =
++{
++ { "@PROGRAM@", (void *) 0 },
++_LT_EOF
++ $SED "s/^$symcode$symcode* \(.*\) \(.*\)$/ {\"\2\", (void *) \&\2},/" < "$nlist" | $GREP -v main >> conftest.$ac_ext
++ cat <<\_LT_EOF >> conftest.$ac_ext
++ {0, (void *) 0}
++};
++
++/* This works around a problem in FreeBSD linker */
++#ifdef FREEBSD_WORKAROUND
++static const void *lt_preloaded_setup() {
++ return lt__PROGRAM__LTX_preloaded_symbols;
++}
++#endif
++
++#ifdef __cplusplus
++}
++#endif
++_LT_EOF
++ # Now try linking the two files.
++ mv conftest.$ac_objext conftstm.$ac_objext
++ lt_save_LIBS="$LIBS"
++ lt_save_CFLAGS="$CFLAGS"
++ LIBS="conftstm.$ac_objext"
++ CFLAGS="$CFLAGS$lt_prog_compiler_no_builtin_flag"
++ if { { eval echo "\"\$as_me\":${as_lineno-$LINENO}: \"$ac_link\""; } >&5
++ (eval $ac_link) 2>&5
++ ac_status=$?
++ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
++ test $ac_status = 0; } && test -s conftest${ac_exeext}; then
++ pipe_works=yes
++ fi
++ LIBS="$lt_save_LIBS"
++ CFLAGS="$lt_save_CFLAGS"
++ else
++ echo "cannot find nm_test_func in $nlist" >&5
++ fi
++ else
++ echo "cannot find nm_test_var in $nlist" >&5
++ fi
++ else
++ echo "cannot run $lt_cv_sys_global_symbol_pipe" >&5
++ fi
++ else
++ echo "$progname: failed program was:" >&5
++ cat conftest.$ac_ext >&5
++ fi
++ rm -rf conftest* conftst*
++
++ # Do not use the global_symbol_pipe unless it works.
++ if test "$pipe_works" = yes; then
++ break
++ else
++ lt_cv_sys_global_symbol_pipe=
++ fi
++done
++
++fi
++
++if test -z "$lt_cv_sys_global_symbol_pipe"; then
++ lt_cv_sys_global_symbol_to_cdecl=
++fi
++if test -z "$lt_cv_sys_global_symbol_pipe$lt_cv_sys_global_symbol_to_cdecl"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: failed" >&5
++$as_echo "failed" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: ok" >&5
++$as_echo "ok" >&6; }
++fi
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++@%:@ Check whether --enable-libtool-lock was given.
++if test "${enable_libtool_lock+set}" = set; then :
++ enableval=$enable_libtool_lock;
++fi
++
++test "x$enable_libtool_lock" != xno && enable_libtool_lock=yes
++
++# Some flags need to be propagated to the compiler or linker for good
++# libtool support.
++case $host in
++ia64-*-hpux*)
++ # Find out which ABI we are using.
++ echo 'int i;' > conftest.$ac_ext
++ if { { eval echo "\"\$as_me\":${as_lineno-$LINENO}: \"$ac_compile\""; } >&5
++ (eval $ac_compile) 2>&5
++ ac_status=$?
++ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
++ test $ac_status = 0; }; then
++ case `/usr/bin/file conftest.$ac_objext` in
++ *ELF-32*)
++ HPUX_IA64_MODE="32"
++ ;;
++ *ELF-64*)
++ HPUX_IA64_MODE="64"
++ ;;
++ esac
++ fi
++ rm -rf conftest*
++ ;;
++*-*-irix6*)
++ # Find out which ABI we are using.
++ echo '#line __oline__ "configure"' > conftest.$ac_ext
++ if { { eval echo "\"\$as_me\":${as_lineno-$LINENO}: \"$ac_compile\""; } >&5
++ (eval $ac_compile) 2>&5
++ ac_status=$?
++ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
++ test $ac_status = 0; }; then
++ if test "$lt_cv_prog_gnu_ld" = yes; then
++ case `/usr/bin/file conftest.$ac_objext` in
++ *32-bit*)
++ LD="${LD-ld} -melf32bsmip"
++ ;;
++ *N32*)
++ LD="${LD-ld} -melf32bmipn32"
++ ;;
++ *64-bit*)
++ LD="${LD-ld} -melf64bmip"
++ ;;
++ esac
++ else
++ case `/usr/bin/file conftest.$ac_objext` in
++ *32-bit*)
++ LD="${LD-ld} -32"
++ ;;
++ *N32*)
++ LD="${LD-ld} -n32"
++ ;;
++ *64-bit*)
++ LD="${LD-ld} -64"
++ ;;
++ esac
++ fi
++ fi
++ rm -rf conftest*
++ ;;
++
++x86_64-*kfreebsd*-gnu|x86_64-*linux*|ppc*-*linux*|powerpc*-*linux*| \
++s390*-*linux*|s390*-*tpf*|sparc*-*linux*)
++ # Find out which ABI we are using.
++ echo 'int i;' > conftest.$ac_ext
++ if { { eval echo "\"\$as_me\":${as_lineno-$LINENO}: \"$ac_compile\""; } >&5
++ (eval $ac_compile) 2>&5
++ ac_status=$?
++ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
++ test $ac_status = 0; }; then
++ case `/usr/bin/file conftest.o` in
++ *32-bit*)
++ case $host in
++ x86_64-*kfreebsd*-gnu)
++ LD="${LD-ld} -m elf_i386_fbsd"
++ ;;
++ x86_64-*linux*)
++ LD="${LD-ld} -m elf_i386"
++ ;;
++ ppc64-*linux*|powerpc64-*linux*)
++ LD="${LD-ld} -m elf32ppclinux"
++ ;;
++ s390x-*linux*)
++ LD="${LD-ld} -m elf_s390"
++ ;;
++ sparc64-*linux*)
++ LD="${LD-ld} -m elf32_sparc"
++ ;;
++ esac
++ ;;
++ *64-bit*)
++ case $host in
++ x86_64-*kfreebsd*-gnu)
++ LD="${LD-ld} -m elf_x86_64_fbsd"
++ ;;
++ x86_64-*linux*)
++ LD="${LD-ld} -m elf_x86_64"
++ ;;
++ ppc*-*linux*|powerpc*-*linux*)
++ LD="${LD-ld} -m elf64ppc"
++ ;;
++ s390*-*linux*|s390*-*tpf*)
++ LD="${LD-ld} -m elf64_s390"
++ ;;
++ sparc*-*linux*)
++ LD="${LD-ld} -m elf64_sparc"
++ ;;
++ esac
++ ;;
++ esac
++ fi
++ rm -rf conftest*
++ ;;
++
++*-*-sco3.2v5*)
++ # On SCO OpenServer 5, we need -belf to get full-featured binaries.
++ SAVE_CFLAGS="$CFLAGS"
++ CFLAGS="$CFLAGS -belf"
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking whether the C compiler needs -belf" >&5
++$as_echo_n "checking whether the C compiler needs -belf... " >&6; }
++if test "${lt_cv_cc_needs_belf+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ ac_ext=c
++ac_cpp='$CPP $CPPFLAGS'
++ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5'
++ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
++ac_compiler_gnu=$ac_cv_c_compiler_gnu
++
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++int
++main ()
++{
++
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_link "$LINENO"; then :
++ lt_cv_cc_needs_belf=yes
++else
++ lt_cv_cc_needs_belf=no
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext conftest.$ac_ext
++ ac_ext=c
++ac_cpp='$CPP $CPPFLAGS'
++ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5'
++ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
++ac_compiler_gnu=$ac_cv_c_compiler_gnu
++
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $lt_cv_cc_needs_belf" >&5
++$as_echo "$lt_cv_cc_needs_belf" >&6; }
++ if test x"$lt_cv_cc_needs_belf" != x"yes"; then
++ # this is probably gcc 2.8.0, egcs 1.0 or newer; no need for -belf
++ CFLAGS="$SAVE_CFLAGS"
++ fi
++ ;;
++sparc*-*solaris*)
++ # Find out which ABI we are using.
++ echo 'int i;' > conftest.$ac_ext
++ if { { eval echo "\"\$as_me\":${as_lineno-$LINENO}: \"$ac_compile\""; } >&5
++ (eval $ac_compile) 2>&5
++ ac_status=$?
++ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
++ test $ac_status = 0; }; then
++ case `/usr/bin/file conftest.o` in
++ *64-bit*)
++ case $lt_cv_prog_gnu_ld in
++ yes*) LD="${LD-ld} -m elf64_sparc" ;;
++ *)
++ if ${LD-ld} -64 -r -o conftest2.o conftest.o >/dev/null 2>&1; then
++ LD="${LD-ld} -64"
++ fi
++ ;;
++ esac
++ ;;
++ esac
++ fi
++ rm -rf conftest*
++ ;;
++esac
++
++need_locks="$enable_libtool_lock"
++
++
++ case $host_os in
++ rhapsody* | darwin*)
++ if test -n "$ac_tool_prefix"; then
++ # Extract the first word of "${ac_tool_prefix}dsymutil", so it can be a program name with args.
++set dummy ${ac_tool_prefix}dsymutil; ac_word=$2
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
++$as_echo_n "checking for $ac_word... " >&6; }
++if test "${ac_cv_prog_DSYMUTIL+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test -n "$DSYMUTIL"; then
++ ac_cv_prog_DSYMUTIL="$DSYMUTIL" # Let the user override the test.
++else
++as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
++ ac_cv_prog_DSYMUTIL="${ac_tool_prefix}dsymutil"
++ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
++ break 2
++ fi
++done
++ done
++IFS=$as_save_IFS
++
++fi
++fi
++DSYMUTIL=$ac_cv_prog_DSYMUTIL
++if test -n "$DSYMUTIL"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $DSYMUTIL" >&5
++$as_echo "$DSYMUTIL" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++
++fi
++if test -z "$ac_cv_prog_DSYMUTIL"; then
++ ac_ct_DSYMUTIL=$DSYMUTIL
++ # Extract the first word of "dsymutil", so it can be a program name with args.
++set dummy dsymutil; ac_word=$2
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
++$as_echo_n "checking for $ac_word... " >&6; }
++if test "${ac_cv_prog_ac_ct_DSYMUTIL+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test -n "$ac_ct_DSYMUTIL"; then
++ ac_cv_prog_ac_ct_DSYMUTIL="$ac_ct_DSYMUTIL" # Let the user override the test.
++else
++as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
++ ac_cv_prog_ac_ct_DSYMUTIL="dsymutil"
++ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
++ break 2
++ fi
++done
++ done
++IFS=$as_save_IFS
++
++fi
++fi
++ac_ct_DSYMUTIL=$ac_cv_prog_ac_ct_DSYMUTIL
++if test -n "$ac_ct_DSYMUTIL"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_ct_DSYMUTIL" >&5
++$as_echo "$ac_ct_DSYMUTIL" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++ if test "x$ac_ct_DSYMUTIL" = x; then
++ DSYMUTIL=":"
++ else
++ case $cross_compiling:$ac_tool_warned in
++yes:)
++{ $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: using cross tools not prefixed with host triplet" >&5
++$as_echo "$as_me: WARNING: using cross tools not prefixed with host triplet" >&2;}
++ac_tool_warned=yes ;;
++esac
++ DSYMUTIL=$ac_ct_DSYMUTIL
++ fi
++else
++ DSYMUTIL="$ac_cv_prog_DSYMUTIL"
++fi
++
++ if test -n "$ac_tool_prefix"; then
++ # Extract the first word of "${ac_tool_prefix}nmedit", so it can be a program name with args.
++set dummy ${ac_tool_prefix}nmedit; ac_word=$2
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
++$as_echo_n "checking for $ac_word... " >&6; }
++if test "${ac_cv_prog_NMEDIT+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test -n "$NMEDIT"; then
++ ac_cv_prog_NMEDIT="$NMEDIT" # Let the user override the test.
++else
++as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
++ ac_cv_prog_NMEDIT="${ac_tool_prefix}nmedit"
++ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
++ break 2
++ fi
++done
++ done
++IFS=$as_save_IFS
++
++fi
++fi
++NMEDIT=$ac_cv_prog_NMEDIT
++if test -n "$NMEDIT"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $NMEDIT" >&5
++$as_echo "$NMEDIT" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++
++fi
++if test -z "$ac_cv_prog_NMEDIT"; then
++ ac_ct_NMEDIT=$NMEDIT
++ # Extract the first word of "nmedit", so it can be a program name with args.
++set dummy nmedit; ac_word=$2
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
++$as_echo_n "checking for $ac_word... " >&6; }
++if test "${ac_cv_prog_ac_ct_NMEDIT+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test -n "$ac_ct_NMEDIT"; then
++ ac_cv_prog_ac_ct_NMEDIT="$ac_ct_NMEDIT" # Let the user override the test.
++else
++as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
++ ac_cv_prog_ac_ct_NMEDIT="nmedit"
++ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
++ break 2
++ fi
++done
++ done
++IFS=$as_save_IFS
++
++fi
++fi
++ac_ct_NMEDIT=$ac_cv_prog_ac_ct_NMEDIT
++if test -n "$ac_ct_NMEDIT"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_ct_NMEDIT" >&5
++$as_echo "$ac_ct_NMEDIT" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++ if test "x$ac_ct_NMEDIT" = x; then
++ NMEDIT=":"
++ else
++ case $cross_compiling:$ac_tool_warned in
++yes:)
++{ $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: using cross tools not prefixed with host triplet" >&5
++$as_echo "$as_me: WARNING: using cross tools not prefixed with host triplet" >&2;}
++ac_tool_warned=yes ;;
++esac
++ NMEDIT=$ac_ct_NMEDIT
++ fi
++else
++ NMEDIT="$ac_cv_prog_NMEDIT"
++fi
++
++ if test -n "$ac_tool_prefix"; then
++ # Extract the first word of "${ac_tool_prefix}lipo", so it can be a program name with args.
++set dummy ${ac_tool_prefix}lipo; ac_word=$2
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
++$as_echo_n "checking for $ac_word... " >&6; }
++if test "${ac_cv_prog_LIPO+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test -n "$LIPO"; then
++ ac_cv_prog_LIPO="$LIPO" # Let the user override the test.
++else
++as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
++ ac_cv_prog_LIPO="${ac_tool_prefix}lipo"
++ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
++ break 2
++ fi
++done
++ done
++IFS=$as_save_IFS
++
++fi
++fi
++LIPO=$ac_cv_prog_LIPO
++if test -n "$LIPO"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $LIPO" >&5
++$as_echo "$LIPO" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++
++fi
++if test -z "$ac_cv_prog_LIPO"; then
++ ac_ct_LIPO=$LIPO
++ # Extract the first word of "lipo", so it can be a program name with args.
++set dummy lipo; ac_word=$2
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
++$as_echo_n "checking for $ac_word... " >&6; }
++if test "${ac_cv_prog_ac_ct_LIPO+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test -n "$ac_ct_LIPO"; then
++ ac_cv_prog_ac_ct_LIPO="$ac_ct_LIPO" # Let the user override the test.
++else
++as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
++ ac_cv_prog_ac_ct_LIPO="lipo"
++ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
++ break 2
++ fi
++done
++ done
++IFS=$as_save_IFS
++
++fi
++fi
++ac_ct_LIPO=$ac_cv_prog_ac_ct_LIPO
++if test -n "$ac_ct_LIPO"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_ct_LIPO" >&5
++$as_echo "$ac_ct_LIPO" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++ if test "x$ac_ct_LIPO" = x; then
++ LIPO=":"
++ else
++ case $cross_compiling:$ac_tool_warned in
++yes:)
++{ $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: using cross tools not prefixed with host triplet" >&5
++$as_echo "$as_me: WARNING: using cross tools not prefixed with host triplet" >&2;}
++ac_tool_warned=yes ;;
++esac
++ LIPO=$ac_ct_LIPO
++ fi
++else
++ LIPO="$ac_cv_prog_LIPO"
++fi
++
++ if test -n "$ac_tool_prefix"; then
++ # Extract the first word of "${ac_tool_prefix}otool", so it can be a program name with args.
++set dummy ${ac_tool_prefix}otool; ac_word=$2
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
++$as_echo_n "checking for $ac_word... " >&6; }
++if test "${ac_cv_prog_OTOOL+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test -n "$OTOOL"; then
++ ac_cv_prog_OTOOL="$OTOOL" # Let the user override the test.
++else
++as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
++ ac_cv_prog_OTOOL="${ac_tool_prefix}otool"
++ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
++ break 2
++ fi
++done
++ done
++IFS=$as_save_IFS
++
++fi
++fi
++OTOOL=$ac_cv_prog_OTOOL
++if test -n "$OTOOL"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $OTOOL" >&5
++$as_echo "$OTOOL" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++
++fi
++if test -z "$ac_cv_prog_OTOOL"; then
++ ac_ct_OTOOL=$OTOOL
++ # Extract the first word of "otool", so it can be a program name with args.
++set dummy otool; ac_word=$2
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
++$as_echo_n "checking for $ac_word... " >&6; }
++if test "${ac_cv_prog_ac_ct_OTOOL+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test -n "$ac_ct_OTOOL"; then
++ ac_cv_prog_ac_ct_OTOOL="$ac_ct_OTOOL" # Let the user override the test.
++else
++as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
++ ac_cv_prog_ac_ct_OTOOL="otool"
++ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
++ break 2
++ fi
++done
++ done
++IFS=$as_save_IFS
++
++fi
++fi
++ac_ct_OTOOL=$ac_cv_prog_ac_ct_OTOOL
++if test -n "$ac_ct_OTOOL"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_ct_OTOOL" >&5
++$as_echo "$ac_ct_OTOOL" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++ if test "x$ac_ct_OTOOL" = x; then
++ OTOOL=":"
++ else
++ case $cross_compiling:$ac_tool_warned in
++yes:)
++{ $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: using cross tools not prefixed with host triplet" >&5
++$as_echo "$as_me: WARNING: using cross tools not prefixed with host triplet" >&2;}
++ac_tool_warned=yes ;;
++esac
++ OTOOL=$ac_ct_OTOOL
++ fi
++else
++ OTOOL="$ac_cv_prog_OTOOL"
++fi
++
++ if test -n "$ac_tool_prefix"; then
++ # Extract the first word of "${ac_tool_prefix}otool64", so it can be a program name with args.
++set dummy ${ac_tool_prefix}otool64; ac_word=$2
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
++$as_echo_n "checking for $ac_word... " >&6; }
++if test "${ac_cv_prog_OTOOL64+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test -n "$OTOOL64"; then
++ ac_cv_prog_OTOOL64="$OTOOL64" # Let the user override the test.
++else
++as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
++ ac_cv_prog_OTOOL64="${ac_tool_prefix}otool64"
++ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
++ break 2
++ fi
++done
++ done
++IFS=$as_save_IFS
++
++fi
++fi
++OTOOL64=$ac_cv_prog_OTOOL64
++if test -n "$OTOOL64"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $OTOOL64" >&5
++$as_echo "$OTOOL64" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++
++fi
++if test -z "$ac_cv_prog_OTOOL64"; then
++ ac_ct_OTOOL64=$OTOOL64
++ # Extract the first word of "otool64", so it can be a program name with args.
++set dummy otool64; ac_word=$2
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
++$as_echo_n "checking for $ac_word... " >&6; }
++if test "${ac_cv_prog_ac_ct_OTOOL64+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test -n "$ac_ct_OTOOL64"; then
++ ac_cv_prog_ac_ct_OTOOL64="$ac_ct_OTOOL64" # Let the user override the test.
++else
++as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
++ ac_cv_prog_ac_ct_OTOOL64="otool64"
++ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
++ break 2
++ fi
++done
++ done
++IFS=$as_save_IFS
++
++fi
++fi
++ac_ct_OTOOL64=$ac_cv_prog_ac_ct_OTOOL64
++if test -n "$ac_ct_OTOOL64"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_ct_OTOOL64" >&5
++$as_echo "$ac_ct_OTOOL64" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++ if test "x$ac_ct_OTOOL64" = x; then
++ OTOOL64=":"
++ else
++ case $cross_compiling:$ac_tool_warned in
++yes:)
++{ $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: using cross tools not prefixed with host triplet" >&5
++$as_echo "$as_me: WARNING: using cross tools not prefixed with host triplet" >&2;}
++ac_tool_warned=yes ;;
++esac
++ OTOOL64=$ac_ct_OTOOL64
++ fi
++else
++ OTOOL64="$ac_cv_prog_OTOOL64"
++fi
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for -single_module linker flag" >&5
++$as_echo_n "checking for -single_module linker flag... " >&6; }
++if test "${lt_cv_apple_cc_single_mod+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ lt_cv_apple_cc_single_mod=no
++ if test -z "${LT_MULTI_MODULE}"; then
++ # By default we will add the -single_module flag. You can override
++ # by either setting the environment variable LT_MULTI_MODULE
++ # non-empty at configure time, or by adding -multi_module to the
++ # link flags.
++ rm -rf libconftest.dylib*
++ echo "int foo(void){return 1;}" > conftest.c
++ echo "$LTCC $LTCFLAGS $LDFLAGS -o libconftest.dylib \
++-dynamiclib -Wl,-single_module conftest.c" >&5
++ $LTCC $LTCFLAGS $LDFLAGS -o libconftest.dylib \
++ -dynamiclib -Wl,-single_module conftest.c 2>conftest.err
++ _lt_result=$?
++ if test -f libconftest.dylib && test ! -s conftest.err && test $_lt_result = 0; then
++ lt_cv_apple_cc_single_mod=yes
++ else
++ cat conftest.err >&5
++ fi
++ rm -rf libconftest.dylib*
++ rm -f conftest.*
++ fi
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $lt_cv_apple_cc_single_mod" >&5
++$as_echo "$lt_cv_apple_cc_single_mod" >&6; }
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for -exported_symbols_list linker flag" >&5
++$as_echo_n "checking for -exported_symbols_list linker flag... " >&6; }
++if test "${lt_cv_ld_exported_symbols_list+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ lt_cv_ld_exported_symbols_list=no
++ save_LDFLAGS=$LDFLAGS
++ echo "_main" > conftest.sym
++ LDFLAGS="$LDFLAGS -Wl,-exported_symbols_list,conftest.sym"
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++int
++main ()
++{
++
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_link "$LINENO"; then :
++ lt_cv_ld_exported_symbols_list=yes
++else
++ lt_cv_ld_exported_symbols_list=no
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext conftest.$ac_ext
++ LDFLAGS="$save_LDFLAGS"
++
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $lt_cv_ld_exported_symbols_list" >&5
++$as_echo "$lt_cv_ld_exported_symbols_list" >&6; }
++ case $host_os in
++ rhapsody* | darwin1.[012])
++ _lt_dar_allow_undefined='${wl}-undefined ${wl}suppress' ;;
++ darwin1.*)
++ _lt_dar_allow_undefined='${wl}-flat_namespace ${wl}-undefined ${wl}suppress' ;;
++ darwin*) # darwin 5.x on
++ # if running on 10.5 or later, the deployment target defaults
++ # to the OS version, if on x86, and 10.4, the deployment
++ # target defaults to 10.4. Don't you love it?
++ case ${MACOSX_DEPLOYMENT_TARGET-10.0},$host in
++ 10.0,*86*-darwin8*|10.0,*-darwin[91]*)
++ _lt_dar_allow_undefined='${wl}-undefined ${wl}dynamic_lookup' ;;
++ 10.[012]*)
++ _lt_dar_allow_undefined='${wl}-flat_namespace ${wl}-undefined ${wl}suppress' ;;
++ 10.*)
++ _lt_dar_allow_undefined='${wl}-undefined ${wl}dynamic_lookup' ;;
++ esac
++ ;;
++ esac
++ if test "$lt_cv_apple_cc_single_mod" = "yes"; then
++ _lt_dar_single_mod='$single_module'
++ fi
++ if test "$lt_cv_ld_exported_symbols_list" = "yes"; then
++ _lt_dar_export_syms=' ${wl}-exported_symbols_list,$output_objdir/${libname}-symbols.expsym'
++ else
++ _lt_dar_export_syms='~$NMEDIT -s $output_objdir/${libname}-symbols.expsym ${lib}'
++ fi
++ if test "$DSYMUTIL" != ":"; then
++ _lt_dsymutil='~$DSYMUTIL $lib || :'
++ else
++ _lt_dsymutil=
++ fi
++ ;;
++ esac
++
++ac_ext=c
++ac_cpp='$CPP $CPPFLAGS'
++ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5'
++ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
++ac_compiler_gnu=$ac_cv_c_compiler_gnu
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking how to run the C preprocessor" >&5
++$as_echo_n "checking how to run the C preprocessor... " >&6; }
++# On Suns, sometimes $CPP names a directory.
++if test -n "$CPP" && test -d "$CPP"; then
++ CPP=
++fi
++if test -z "$CPP"; then
++ if test "${ac_cv_prog_CPP+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ # Double quotes because CPP needs to be expanded
++ for CPP in "$CC -E" "$CC -E -traditional-cpp" "/lib/cpp"
++ do
++ ac_preproc_ok=false
++for ac_c_preproc_warn_flag in '' yes
++do
++ # Use a header file that comes with gcc, so configuring glibc
++ # with a fresh cross-compiler works.
++ # Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
++ # <limits.h> exists even on freestanding compilers.
++ # On the NeXT, cc -E runs the code through the compiler's parser,
++ # not just through cpp. "Syntax error" is here to catch this case.
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++@%:@ifdef __STDC__
++@%:@ include <limits.h>
++@%:@else
++@%:@ include <assert.h>
++@%:@endif
++ Syntax error
++_ACEOF
++if ac_fn_c_try_cpp "$LINENO"; then :
++
++else
++ # Broken: fails on valid input.
++continue
++fi
++rm -f conftest.err conftest.$ac_ext
++
++ # OK, works on sane cases. Now check whether nonexistent headers
++ # can be detected and how.
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++@%:@include <ac_nonexistent.h>
++_ACEOF
++if ac_fn_c_try_cpp "$LINENO"; then :
++ # Broken: success on invalid input.
++continue
++else
++ # Passes both tests.
++ac_preproc_ok=:
++break
++fi
++rm -f conftest.err conftest.$ac_ext
++
++done
++# Because of `break', _AC_PREPROC_IFELSE's cleaning code was skipped.
++rm -f conftest.err conftest.$ac_ext
++if $ac_preproc_ok; then :
++ break
++fi
++
++ done
++ ac_cv_prog_CPP=$CPP
++
++fi
++ CPP=$ac_cv_prog_CPP
++else
++ ac_cv_prog_CPP=$CPP
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $CPP" >&5
++$as_echo "$CPP" >&6; }
++ac_preproc_ok=false
++for ac_c_preproc_warn_flag in '' yes
++do
++ # Use a header file that comes with gcc, so configuring glibc
++ # with a fresh cross-compiler works.
++ # Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
++ # <limits.h> exists even on freestanding compilers.
++ # On the NeXT, cc -E runs the code through the compiler's parser,
++ # not just through cpp. "Syntax error" is here to catch this case.
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++@%:@ifdef __STDC__
++@%:@ include <limits.h>
++@%:@else
++@%:@ include <assert.h>
++@%:@endif
++ Syntax error
++_ACEOF
++if ac_fn_c_try_cpp "$LINENO"; then :
++
++else
++ # Broken: fails on valid input.
++continue
++fi
++rm -f conftest.err conftest.$ac_ext
++
++ # OK, works on sane cases. Now check whether nonexistent headers
++ # can be detected and how.
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++@%:@include <ac_nonexistent.h>
++_ACEOF
++if ac_fn_c_try_cpp "$LINENO"; then :
++ # Broken: success on invalid input.
++continue
++else
++ # Passes both tests.
++ac_preproc_ok=:
++break
++fi
++rm -f conftest.err conftest.$ac_ext
++
++done
++# Because of `break', _AC_PREPROC_IFELSE's cleaning code was skipped.
++rm -f conftest.err conftest.$ac_ext
++if $ac_preproc_ok; then :
++
++else
++ { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
++$as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
++as_fn_error "C preprocessor \"$CPP\" fails sanity check
++See \`config.log' for more details." "$LINENO" 5; }
++fi
++
++ac_ext=c
++ac_cpp='$CPP $CPPFLAGS'
++ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5'
++ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
++ac_compiler_gnu=$ac_cv_c_compiler_gnu
++
++
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for ANSI C header files" >&5
++$as_echo_n "checking for ANSI C header files... " >&6; }
++if test "${ac_cv_header_stdc+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++#include <stdlib.h>
++#include <stdarg.h>
++#include <string.h>
++#include <float.h>
++
++int
++main ()
++{
++
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_compile "$LINENO"; then :
++ ac_cv_header_stdc=yes
++else
++ ac_cv_header_stdc=no
++fi
++rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
++
++if test $ac_cv_header_stdc = yes; then
++ # SunOS 4.x string.h does not declare mem*, contrary to ANSI.
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++#include <string.h>
++
++_ACEOF
++if (eval "$ac_cpp conftest.$ac_ext") 2>&5 |
++ $EGREP "memchr" >/dev/null 2>&1; then :
++
++else
++ ac_cv_header_stdc=no
++fi
++rm -f conftest*
++
++fi
++
++if test $ac_cv_header_stdc = yes; then
++ # ISC 2.0.2 stdlib.h does not declare free, contrary to ANSI.
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++#include <stdlib.h>
++
++_ACEOF
++if (eval "$ac_cpp conftest.$ac_ext") 2>&5 |
++ $EGREP "free" >/dev/null 2>&1; then :
++
++else
++ ac_cv_header_stdc=no
++fi
++rm -f conftest*
++
++fi
++
++if test $ac_cv_header_stdc = yes; then
++ # /bin/cc in Irix-4.0.5 gets non-ANSI ctype macros unless using -ansi.
++ if test "$cross_compiling" = yes; then :
++ :
++else
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++#include <ctype.h>
++#include <stdlib.h>
++#if ((' ' & 0x0FF) == 0x020)
++# define ISLOWER(c) ('a' <= (c) && (c) <= 'z')
++# define TOUPPER(c) (ISLOWER(c) ? 'A' + ((c) - 'a') : (c))
++#else
++# define ISLOWER(c) \
++ (('a' <= (c) && (c) <= 'i') \
++ || ('j' <= (c) && (c) <= 'r') \
++ || ('s' <= (c) && (c) <= 'z'))
++# define TOUPPER(c) (ISLOWER(c) ? ((c) | 0x40) : (c))
++#endif
++
++#define XOR(e, f) (((e) && !(f)) || (!(e) && (f)))
++int
++main ()
++{
++ int i;
++ for (i = 0; i < 256; i++)
++ if (XOR (islower (i), ISLOWER (i))
++ || toupper (i) != TOUPPER (i))
++ return 2;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_run "$LINENO"; then :
++
++else
++ ac_cv_header_stdc=no
++fi
++rm -f core *.core core.conftest.* gmon.out bb.out conftest$ac_exeext \
++ conftest.$ac_objext conftest.beam conftest.$ac_ext
++fi
++
++fi
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_header_stdc" >&5
++$as_echo "$ac_cv_header_stdc" >&6; }
++if test $ac_cv_header_stdc = yes; then
++
++$as_echo "@%:@define STDC_HEADERS 1" >>confdefs.h
++
++fi
++
++# On IRIX 5.3, sys/types and inttypes.h are conflicting.
++for ac_header in sys/types.h sys/stat.h stdlib.h string.h memory.h strings.h \
++ inttypes.h stdint.h unistd.h
++do :
++ as_ac_Header=`$as_echo "ac_cv_header_$ac_header" | $as_tr_sh`
++ac_fn_c_check_header_compile "$LINENO" "$ac_header" "$as_ac_Header" "$ac_includes_default
++"
++eval as_val=\$$as_ac_Header
++ if test "x$as_val" = x""yes; then :
++ cat >>confdefs.h <<_ACEOF
++@%:@define `$as_echo "HAVE_$ac_header" | $as_tr_cpp` 1
++_ACEOF
++
++fi
++
++done
++
++
++for ac_header in dlfcn.h
++do :
++ ac_fn_c_check_header_compile "$LINENO" "dlfcn.h" "ac_cv_header_dlfcn_h" "$ac_includes_default
++"
++if test "x$ac_cv_header_dlfcn_h" = x""yes; then :
++ cat >>confdefs.h <<_ACEOF
++@%:@define HAVE_DLFCN_H 1
++_ACEOF
++
++fi
++
++done
++
++
++
++# Set options
++
++
++
++ enable_dlopen=no
++
++
++ enable_win32_dll=no
++
++
++ @%:@ Check whether --enable-shared was given.
++if test "${enable_shared+set}" = set; then :
++ enableval=$enable_shared; p=${PACKAGE-default}
++ case $enableval in
++ yes) enable_shared=yes ;;
++ no) enable_shared=no ;;
++ *)
++ enable_shared=no
++ # Look at the argument we got. We use all the common list separators.
++ lt_save_ifs="$IFS"; IFS="${IFS}$PATH_SEPARATOR,"
++ for pkg in $enableval; do
++ IFS="$lt_save_ifs"
++ if test "X$pkg" = "X$p"; then
++ enable_shared=yes
++ fi
++ done
++ IFS="$lt_save_ifs"
++ ;;
++ esac
++else
++ enable_shared=yes
++fi
++
++
++
++
++
++
++
++
++
++ @%:@ Check whether --enable-static was given.
++if test "${enable_static+set}" = set; then :
++ enableval=$enable_static; p=${PACKAGE-default}
++ case $enableval in
++ yes) enable_static=yes ;;
++ no) enable_static=no ;;
++ *)
++ enable_static=no
++ # Look at the argument we got. We use all the common list separators.
++ lt_save_ifs="$IFS"; IFS="${IFS}$PATH_SEPARATOR,"
++ for pkg in $enableval; do
++ IFS="$lt_save_ifs"
++ if test "X$pkg" = "X$p"; then
++ enable_static=yes
++ fi
++ done
++ IFS="$lt_save_ifs"
++ ;;
++ esac
++else
++ enable_static=yes
++fi
++
++
++
++
++
++
++
++
++
++
++@%:@ Check whether --with-pic was given.
++if test "${with_pic+set}" = set; then :
++ withval=$with_pic; pic_mode="$withval"
++else
++ pic_mode=default
++fi
++
++
++test -z "$pic_mode" && pic_mode=default
++
++
++
++
++
++
++
++ @%:@ Check whether --enable-fast-install was given.
++if test "${enable_fast_install+set}" = set; then :
++ enableval=$enable_fast_install; p=${PACKAGE-default}
++ case $enableval in
++ yes) enable_fast_install=yes ;;
++ no) enable_fast_install=no ;;
++ *)
++ enable_fast_install=no
++ # Look at the argument we got. We use all the common list separators.
++ lt_save_ifs="$IFS"; IFS="${IFS}$PATH_SEPARATOR,"
++ for pkg in $enableval; do
++ IFS="$lt_save_ifs"
++ if test "X$pkg" = "X$p"; then
++ enable_fast_install=yes
++ fi
++ done
++ IFS="$lt_save_ifs"
++ ;;
++ esac
++else
++ enable_fast_install=yes
++fi
++
++
++
++
++
++
++
++
++
++
++
++# This can be used to rebuild libtool when needed
++LIBTOOL_DEPS="$ltmain"
++
++# Always use our own libtool.
++LIBTOOL='$(SHELL) $(top_builddir)/libtool'
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++test -z "$LN_S" && LN_S="ln -s"
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++if test -n "${ZSH_VERSION+set}" ; then
++ setopt NO_GLOB_SUBST
++fi
++
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for objdir" >&5
++$as_echo_n "checking for objdir... " >&6; }
++if test "${lt_cv_objdir+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ rm -f .libs 2>/dev/null
++mkdir .libs 2>/dev/null
++if test -d .libs; then
++ lt_cv_objdir=.libs
++else
++ # MS-DOS does not allow filenames that begin with a dot.
++ lt_cv_objdir=_libs
++fi
++rmdir .libs 2>/dev/null
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $lt_cv_objdir" >&5
++$as_echo "$lt_cv_objdir" >&6; }
++objdir=$lt_cv_objdir
++
++
++
++
++
++cat >>confdefs.h <<_ACEOF
++@%:@define LT_OBJDIR "$lt_cv_objdir/"
++_ACEOF
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++case $host_os in
++aix3*)
++ # AIX sometimes has problems with the GCC collect2 program. For some
++ # reason, if we set the COLLECT_NAMES environment variable, the problems
++ # vanish in a puff of smoke.
++ if test "X${COLLECT_NAMES+set}" != Xset; then
++ COLLECT_NAMES=
++ export COLLECT_NAMES
++ fi
++ ;;
++esac
++
++# Sed substitution that helps us do robust quoting. It backslashifies
++# metacharacters that are still active within double-quoted strings.
++sed_quote_subst='s/\(["`$\\]\)/\\\1/g'
++
++# Same as above, but do not quote variable references.
++double_quote_subst='s/\(["`\\]\)/\\\1/g'
++
++# Sed substitution to delay expansion of an escaped shell variable in a
++# double_quote_subst'ed string.
++delay_variable_subst='s/\\\\\\\\\\\$/\\\\\\$/g'
++
++# Sed substitution to delay expansion of an escaped single quote.
++delay_single_quote_subst='s/'\''/'\'\\\\\\\'\''/g'
++
++# Sed substitution to avoid accidental globbing in evaled expressions
++no_glob_subst='s/\*/\\\*/g'
++
++# Global variables:
++ofile=libtool
++can_build_shared=yes
++
++# All known linkers require a `.a' archive for static linking (except MSVC,
++# which needs '.lib').
++libext=a
++
++with_gnu_ld="$lt_cv_prog_gnu_ld"
++
++old_CC="$CC"
++old_CFLAGS="$CFLAGS"
++
++# Set sane defaults for various variables
++test -z "$CC" && CC=cc
++test -z "$LTCC" && LTCC=$CC
++test -z "$LTCFLAGS" && LTCFLAGS=$CFLAGS
++test -z "$LD" && LD=ld
++test -z "$ac_objext" && ac_objext=o
++
++for cc_temp in $compiler""; do
++ case $cc_temp in
++ compile | *[\\/]compile | ccache | *[\\/]ccache ) ;;
++ distcc | *[\\/]distcc | purify | *[\\/]purify ) ;;
++ \-*) ;;
++ *) break;;
++ esac
++done
++cc_basename=`$ECHO "X$cc_temp" | $Xsed -e 's%.*/%%' -e "s%^$host_alias-%%"`
++
++
++# Only perform the check for file, if the check method requires it
++test -z "$MAGIC_CMD" && MAGIC_CMD=file
++case $deplibs_check_method in
++file_magic*)
++ if test "$file_magic_cmd" = '$MAGIC_CMD'; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for ${ac_tool_prefix}file" >&5
++$as_echo_n "checking for ${ac_tool_prefix}file... " >&6; }
++if test "${lt_cv_path_MAGIC_CMD+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ case $MAGIC_CMD in
++[\\/*] | ?:[\\/]*)
++ lt_cv_path_MAGIC_CMD="$MAGIC_CMD" # Let the user override the test with a path.
++ ;;
++*)
++ lt_save_MAGIC_CMD="$MAGIC_CMD"
++ lt_save_ifs="$IFS"; IFS=$PATH_SEPARATOR
++ ac_dummy="/usr/bin$PATH_SEPARATOR$PATH"
++ for ac_dir in $ac_dummy; do
++ IFS="$lt_save_ifs"
++ test -z "$ac_dir" && ac_dir=.
++ if test -f $ac_dir/${ac_tool_prefix}file; then
++ lt_cv_path_MAGIC_CMD="$ac_dir/${ac_tool_prefix}file"
++ if test -n "$file_magic_test_file"; then
++ case $deplibs_check_method in
++ "file_magic "*)
++ file_magic_regex=`expr "$deplibs_check_method" : "file_magic \(.*\)"`
++ MAGIC_CMD="$lt_cv_path_MAGIC_CMD"
++ if eval $file_magic_cmd \$file_magic_test_file 2> /dev/null |
++ $EGREP "$file_magic_regex" > /dev/null; then
++ :
++ else
++ cat <<_LT_EOF 1>&2
++
++*** Warning: the command libtool uses to detect shared libraries,
++*** $file_magic_cmd, produces output that libtool cannot recognize.
++*** The result is that libtool may fail to recognize shared libraries
++*** as such. This will affect the creation of libtool libraries that
++*** depend on shared libraries, but programs linked with such libtool
++*** libraries will work regardless of this problem. Nevertheless, you
++*** may want to report the problem to your system manager and/or to
++*** bug-libtool at gnu.org
++
++_LT_EOF
++ fi ;;
++ esac
++ fi
++ break
++ fi
++ done
++ IFS="$lt_save_ifs"
++ MAGIC_CMD="$lt_save_MAGIC_CMD"
++ ;;
++esac
++fi
++
++MAGIC_CMD="$lt_cv_path_MAGIC_CMD"
++if test -n "$MAGIC_CMD"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $MAGIC_CMD" >&5
++$as_echo "$MAGIC_CMD" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++
++
++
++
++if test -z "$lt_cv_path_MAGIC_CMD"; then
++ if test -n "$ac_tool_prefix"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for file" >&5
++$as_echo_n "checking for file... " >&6; }
++if test "${lt_cv_path_MAGIC_CMD+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ case $MAGIC_CMD in
++[\\/*] | ?:[\\/]*)
++ lt_cv_path_MAGIC_CMD="$MAGIC_CMD" # Let the user override the test with a path.
++ ;;
++*)
++ lt_save_MAGIC_CMD="$MAGIC_CMD"
++ lt_save_ifs="$IFS"; IFS=$PATH_SEPARATOR
++ ac_dummy="/usr/bin$PATH_SEPARATOR$PATH"
++ for ac_dir in $ac_dummy; do
++ IFS="$lt_save_ifs"
++ test -z "$ac_dir" && ac_dir=.
++ if test -f $ac_dir/file; then
++ lt_cv_path_MAGIC_CMD="$ac_dir/file"
++ if test -n "$file_magic_test_file"; then
++ case $deplibs_check_method in
++ "file_magic "*)
++ file_magic_regex=`expr "$deplibs_check_method" : "file_magic \(.*\)"`
++ MAGIC_CMD="$lt_cv_path_MAGIC_CMD"
++ if eval $file_magic_cmd \$file_magic_test_file 2> /dev/null |
++ $EGREP "$file_magic_regex" > /dev/null; then
++ :
++ else
++ cat <<_LT_EOF 1>&2
++
++*** Warning: the command libtool uses to detect shared libraries,
++*** $file_magic_cmd, produces output that libtool cannot recognize.
++*** The result is that libtool may fail to recognize shared libraries
++*** as such. This will affect the creation of libtool libraries that
++*** depend on shared libraries, but programs linked with such libtool
++*** libraries will work regardless of this problem. Nevertheless, you
++*** may want to report the problem to your system manager and/or to
++*** bug-libtool at gnu.org
++
++_LT_EOF
++ fi ;;
++ esac
++ fi
++ break
++ fi
++ done
++ IFS="$lt_save_ifs"
++ MAGIC_CMD="$lt_save_MAGIC_CMD"
++ ;;
++esac
++fi
++
++MAGIC_CMD="$lt_cv_path_MAGIC_CMD"
++if test -n "$MAGIC_CMD"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $MAGIC_CMD" >&5
++$as_echo "$MAGIC_CMD" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++
++ else
++ MAGIC_CMD=:
++ fi
++fi
++
++ fi
++ ;;
++esac
++
++# Use C for the default configuration in the libtool script
++
++lt_save_CC="$CC"
++ac_ext=c
++ac_cpp='$CPP $CPPFLAGS'
++ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5'
++ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
++ac_compiler_gnu=$ac_cv_c_compiler_gnu
++
++
++# Source file extension for C test sources.
++ac_ext=c
++
++# Object file extension for compiled C test sources.
++objext=o
++objext=$objext
++
++# Code to be used in simple compile tests
++lt_simple_compile_test_code="int some_variable = 0;"
++
++# Code to be used in simple link tests
++lt_simple_link_test_code='int main(){return(0);}'
++
++
++
++
++
++
++
++# If no C compiler was specified, use CC.
++LTCC=${LTCC-"$CC"}
++
++# If no C compiler flags were specified, use CFLAGS.
++LTCFLAGS=${LTCFLAGS-"$CFLAGS"}
++
++# Allow CC to be a program name with arguments.
++compiler=$CC
++
++# Save the default compiler, since it gets overwritten when the other
++# tags are being tested, and _LT_TAGVAR(compiler, []) is a NOP.
++compiler_DEFAULT=$CC
++
++# save warnings/boilerplate of simple test code
++ac_outfile=conftest.$ac_objext
++echo "$lt_simple_compile_test_code" >conftest.$ac_ext
++eval "$ac_compile" 2>&1 >/dev/null | $SED '/^$/d; /^ *+/d' >conftest.err
++_lt_compiler_boilerplate=`cat conftest.err`
++$RM conftest*
++
++ac_outfile=conftest.$ac_objext
++echo "$lt_simple_link_test_code" >conftest.$ac_ext
++eval "$ac_link" 2>&1 >/dev/null | $SED '/^$/d; /^ *+/d' >conftest.err
++_lt_linker_boilerplate=`cat conftest.err`
++$RM -r conftest*
++
++
++if test -n "$compiler"; then
++
++lt_prog_compiler_no_builtin_flag=
++
++if test "$GCC" = yes; then
++ lt_prog_compiler_no_builtin_flag=' -fno-builtin'
++
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking if $compiler supports -fno-rtti -fno-exceptions" >&5
++$as_echo_n "checking if $compiler supports -fno-rtti -fno-exceptions... " >&6; }
++if test "${lt_cv_prog_compiler_rtti_exceptions+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ lt_cv_prog_compiler_rtti_exceptions=no
++ ac_outfile=conftest.$ac_objext
++ echo "$lt_simple_compile_test_code" > conftest.$ac_ext
++ lt_compiler_flag="-fno-rtti -fno-exceptions"
++ # Insert the option either (1) after the last *FLAGS variable, or
++ # (2) before a word containing "conftest.", or (3) at the end.
++ # Note that $ac_compile itself does not contain backslashes and begins
++ # with a dollar sign (not a hyphen), so the echo should work correctly.
++ # The option is referenced via a variable to avoid confusing sed.
++ lt_compile=`echo "$ac_compile" | $SED \
++ -e 's:.*FLAGS}\{0,1\} :&$lt_compiler_flag :; t' \
++ -e 's: [^ ]*conftest\.: $lt_compiler_flag&:; t' \
++ -e 's:$: $lt_compiler_flag:'`
++ (eval echo "\"\$as_me:__oline__: $lt_compile\"" >&5)
++ (eval "$lt_compile" 2>conftest.err)
++ ac_status=$?
++ cat conftest.err >&5
++ echo "$as_me:__oline__: \$? = $ac_status" >&5
++ if (exit $ac_status) && test -s "$ac_outfile"; then
++ # The compiler can only warn and ignore the option if not recognized
++ # So say no if there are warnings other than the usual output.
++ $ECHO "X$_lt_compiler_boilerplate" | $Xsed -e '/^$/d' >conftest.exp
++ $SED '/^$/d; /^ *+/d' conftest.err >conftest.er2
++ if test ! -s conftest.er2 || diff conftest.exp conftest.er2 >/dev/null; then
++ lt_cv_prog_compiler_rtti_exceptions=yes
++ fi
++ fi
++ $RM conftest*
++
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $lt_cv_prog_compiler_rtti_exceptions" >&5
++$as_echo "$lt_cv_prog_compiler_rtti_exceptions" >&6; }
++
++if test x"$lt_cv_prog_compiler_rtti_exceptions" = xyes; then
++ lt_prog_compiler_no_builtin_flag="$lt_prog_compiler_no_builtin_flag -fno-rtti -fno-exceptions"
++else
++ :
++fi
++
++fi
++
++
++
++
++
++
++ lt_prog_compiler_wl=
++lt_prog_compiler_pic=
++lt_prog_compiler_static=
++
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $compiler option to produce PIC" >&5
++$as_echo_n "checking for $compiler option to produce PIC... " >&6; }
++
++ if test "$GCC" = yes; then
++ lt_prog_compiler_wl='-Wl,'
++ lt_prog_compiler_static='-static'
++
++ case $host_os in
++ aix*)
++ # All AIX code is PIC.
++ if test "$host_cpu" = ia64; then
++ # AIX 5 now supports IA64 processor
++ lt_prog_compiler_static='-Bstatic'
++ fi
++ ;;
++
++ amigaos*)
++ case $host_cpu in
++ powerpc)
++ # see comment about AmigaOS4 .so support
++ lt_prog_compiler_pic='-fPIC'
++ ;;
++ m68k)
++ # FIXME: we need at least 68020 code to build shared libraries, but
++ # adding the `-m68020' flag to GCC prevents building anything better,
++ # like `-m68040'.
++ lt_prog_compiler_pic='-m68020 -resident32 -malways-restore-a4'
++ ;;
++ esac
++ ;;
++
++ beos* | irix5* | irix6* | nonstopux* | osf3* | osf4* | osf5*)
++ # PIC is the default for these OSes.
++ ;;
++
++ mingw* | cygwin* | pw32* | os2* | cegcc*)
++ # This hack is so that the source file can tell whether it is being
++ # built for inclusion in a dll (and should export symbols for example).
++ # Although the cygwin gcc ignores -fPIC, still need this for old-style
++ # (--disable-auto-import) libraries
++ lt_prog_compiler_pic='-DDLL_EXPORT'
++ ;;
++
++ darwin* | rhapsody*)
++ # PIC is the default on this platform
++ # Common symbols not allowed in MH_DYLIB files
++ lt_prog_compiler_pic='-fno-common'
++ ;;
++
++ hpux*)
++ # PIC is the default for 64-bit PA HP-UX, but not for 32-bit
++ # PA HP-UX. On IA64 HP-UX, PIC is the default but the pic flag
++ # sets the default TLS model and affects inlining.
++ case $host_cpu in
++ hppa*64*)
++ # +Z the default
++ ;;
++ *)
++ lt_prog_compiler_pic='-fPIC'
++ ;;
++ esac
++ ;;
++
++ interix[3-9]*)
++ # Interix 3.x gcc -fpic/-fPIC options generate broken code.
++ # Instead, we relocate shared libraries at runtime.
++ ;;
++
++ msdosdjgpp*)
++ # Just because we use GCC doesn't mean we suddenly get shared libraries
++ # on systems that don't support them.
++ lt_prog_compiler_can_build_shared=no
++ enable_shared=no
++ ;;
++
++ *nto* | *qnx*)
++ # QNX uses GNU C++, but need to define -shared option too, otherwise
++ # it will coredump.
++ lt_prog_compiler_pic='-fPIC -shared'
++ ;;
++
++ sysv4*MP*)
++ if test -d /usr/nec; then
++ lt_prog_compiler_pic=-Kconform_pic
++ fi
++ ;;
++
++ *)
++ lt_prog_compiler_pic='-fPIC'
++ ;;
++ esac
++ else
++ # PORTME Check for flag to pass linker flags through the system compiler.
++ case $host_os in
++ aix*)
++ lt_prog_compiler_wl='-Wl,'
++ if test "$host_cpu" = ia64; then
++ # AIX 5 now supports IA64 processor
++ lt_prog_compiler_static='-Bstatic'
++ else
++ lt_prog_compiler_static='-bnso -bI:/lib/syscalls.exp'
++ fi
++ ;;
++
++ mingw* | cygwin* | pw32* | os2* | cegcc*)
++ # This hack is so that the source file can tell whether it is being
++ # built for inclusion in a dll (and should export symbols for example).
++ lt_prog_compiler_pic='-DDLL_EXPORT'
++ ;;
++
++ hpux9* | hpux10* | hpux11*)
++ lt_prog_compiler_wl='-Wl,'
++ # PIC is the default for IA64 HP-UX and 64-bit HP-UX, but
++ # not for PA HP-UX.
++ case $host_cpu in
++ hppa*64*|ia64*)
++ # +Z the default
++ ;;
++ *)
++ lt_prog_compiler_pic='+Z'
++ ;;
++ esac
++ # Is there a better lt_prog_compiler_static that works with the bundled CC?
++ lt_prog_compiler_static='${wl}-a ${wl}archive'
++ ;;
++
++ irix5* | irix6* | nonstopux*)
++ lt_prog_compiler_wl='-Wl,'
++ # PIC (with -KPIC) is the default.
++ lt_prog_compiler_static='-non_shared'
++ ;;
++
++ linux* | k*bsd*-gnu)
++ case $cc_basename in
++ # old Intel for x86_64 which still supported -KPIC.
++ ecc*)
++ lt_prog_compiler_wl='-Wl,'
++ lt_prog_compiler_pic='-KPIC'
++ lt_prog_compiler_static='-static'
++ ;;
++ # icc used to be incompatible with GCC.
++ # ICC 10 doesn't accept -KPIC any more.
++ icc* | ifort*)
++ lt_prog_compiler_wl='-Wl,'
++ lt_prog_compiler_pic='-fPIC'
++ lt_prog_compiler_static='-static'
++ ;;
++ # Lahey Fortran 8.1.
++ lf95*)
++ lt_prog_compiler_wl='-Wl,'
++ lt_prog_compiler_pic='--shared'
++ lt_prog_compiler_static='--static'
++ ;;
++ pgcc* | pgf77* | pgf90* | pgf95*)
++ # Portland Group compilers (*not* the Pentium gcc compiler,
++ # which looks to be a dead project)
++ lt_prog_compiler_wl='-Wl,'
++ lt_prog_compiler_pic='-fpic'
++ lt_prog_compiler_static='-Bstatic'
++ ;;
++ ccc*)
++ lt_prog_compiler_wl='-Wl,'
++ # All Alpha code is PIC.
++ lt_prog_compiler_static='-non_shared'
++ ;;
++ xl*)
++ # IBM XL C 8.0/Fortran 10.1 on PPC
++ lt_prog_compiler_wl='-Wl,'
++ lt_prog_compiler_pic='-qpic'
++ lt_prog_compiler_static='-qstaticlink'
++ ;;
++ *)
++ case `$CC -V 2>&1 | sed 5q` in
++ *Sun\ C*)
++ # Sun C 5.9
++ lt_prog_compiler_pic='-KPIC'
++ lt_prog_compiler_static='-Bstatic'
++ lt_prog_compiler_wl='-Wl,'
++ ;;
++ *Sun\ F*)
++ # Sun Fortran 8.3 passes all unrecognized flags to the linker
++ lt_prog_compiler_pic='-KPIC'
++ lt_prog_compiler_static='-Bstatic'
++ lt_prog_compiler_wl=''
++ ;;
++ esac
++ ;;
++ esac
++ ;;
++
++ newsos6)
++ lt_prog_compiler_pic='-KPIC'
++ lt_prog_compiler_static='-Bstatic'
++ ;;
++
++ *nto* | *qnx*)
++ # QNX uses GNU C++, but need to define -shared option too, otherwise
++ # it will coredump.
++ lt_prog_compiler_pic='-fPIC -shared'
++ ;;
++
++ osf3* | osf4* | osf5*)
++ lt_prog_compiler_wl='-Wl,'
++ # All OSF/1 code is PIC.
++ lt_prog_compiler_static='-non_shared'
++ ;;
++
++ rdos*)
++ lt_prog_compiler_static='-non_shared'
++ ;;
++
++ solaris*)
++ lt_prog_compiler_pic='-KPIC'
++ lt_prog_compiler_static='-Bstatic'
++ case $cc_basename in
++ f77* | f90* | f95*)
++ lt_prog_compiler_wl='-Qoption ld ';;
++ *)
++ lt_prog_compiler_wl='-Wl,';;
++ esac
++ ;;
++
++ sunos4*)
++ lt_prog_compiler_wl='-Qoption ld '
++ lt_prog_compiler_pic='-PIC'
++ lt_prog_compiler_static='-Bstatic'
++ ;;
++
++ sysv4 | sysv4.2uw2* | sysv4.3*)
++ lt_prog_compiler_wl='-Wl,'
++ lt_prog_compiler_pic='-KPIC'
++ lt_prog_compiler_static='-Bstatic'
++ ;;
++
++ sysv4*MP*)
++ if test -d /usr/nec ;then
++ lt_prog_compiler_pic='-Kconform_pic'
++ lt_prog_compiler_static='-Bstatic'
++ fi
++ ;;
++
++ sysv5* | unixware* | sco3.2v5* | sco5v6* | OpenUNIX*)
++ lt_prog_compiler_wl='-Wl,'
++ lt_prog_compiler_pic='-KPIC'
++ lt_prog_compiler_static='-Bstatic'
++ ;;
++
++ unicos*)
++ lt_prog_compiler_wl='-Wl,'
++ lt_prog_compiler_can_build_shared=no
++ ;;
++
++ uts4*)
++ lt_prog_compiler_pic='-pic'
++ lt_prog_compiler_static='-Bstatic'
++ ;;
++
++ *)
++ lt_prog_compiler_can_build_shared=no
++ ;;
++ esac
++ fi
++
++case $host_os in
++ # For platforms which do not support PIC, -DPIC is meaningless:
++ *djgpp*)
++ lt_prog_compiler_pic=
++ ;;
++ *)
++ lt_prog_compiler_pic="$lt_prog_compiler_pic@&t@ -DPIC"
++ ;;
++esac
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $lt_prog_compiler_pic" >&5
++$as_echo "$lt_prog_compiler_pic" >&6; }
++
++
++
++
++
++
++#
++# Check to make sure the PIC flag actually works.
++#
++if test -n "$lt_prog_compiler_pic"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking if $compiler PIC flag $lt_prog_compiler_pic works" >&5
++$as_echo_n "checking if $compiler PIC flag $lt_prog_compiler_pic works... " >&6; }
++if test "${lt_cv_prog_compiler_pic_works+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ lt_cv_prog_compiler_pic_works=no
++ ac_outfile=conftest.$ac_objext
++ echo "$lt_simple_compile_test_code" > conftest.$ac_ext
++ lt_compiler_flag="$lt_prog_compiler_pic@&t@ -DPIC"
++ # Insert the option either (1) after the last *FLAGS variable, or
++ # (2) before a word containing "conftest.", or (3) at the end.
++ # Note that $ac_compile itself does not contain backslashes and begins
++ # with a dollar sign (not a hyphen), so the echo should work correctly.
++ # The option is referenced via a variable to avoid confusing sed.
++ lt_compile=`echo "$ac_compile" | $SED \
++ -e 's:.*FLAGS}\{0,1\} :&$lt_compiler_flag :; t' \
++ -e 's: [^ ]*conftest\.: $lt_compiler_flag&:; t' \
++ -e 's:$: $lt_compiler_flag:'`
++ (eval echo "\"\$as_me:__oline__: $lt_compile\"" >&5)
++ (eval "$lt_compile" 2>conftest.err)
++ ac_status=$?
++ cat conftest.err >&5
++ echo "$as_me:__oline__: \$? = $ac_status" >&5
++ if (exit $ac_status) && test -s "$ac_outfile"; then
++ # The compiler can only warn and ignore the option if not recognized
++ # So say no if there are warnings other than the usual output.
++ $ECHO "X$_lt_compiler_boilerplate" | $Xsed -e '/^$/d' >conftest.exp
++ $SED '/^$/d; /^ *+/d' conftest.err >conftest.er2
++ if test ! -s conftest.er2 || diff conftest.exp conftest.er2 >/dev/null; then
++ lt_cv_prog_compiler_pic_works=yes
++ fi
++ fi
++ $RM conftest*
++
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $lt_cv_prog_compiler_pic_works" >&5
++$as_echo "$lt_cv_prog_compiler_pic_works" >&6; }
++
++if test x"$lt_cv_prog_compiler_pic_works" = xyes; then
++ case $lt_prog_compiler_pic in
++ "" | " "*) ;;
++ *) lt_prog_compiler_pic=" $lt_prog_compiler_pic" ;;
++ esac
++else
++ lt_prog_compiler_pic=
++ lt_prog_compiler_can_build_shared=no
++fi
++
++fi
++
++
++
++
++
++
++#
++# Check to make sure the static flag actually works.
++#
++wl=$lt_prog_compiler_wl eval lt_tmp_static_flag=\"$lt_prog_compiler_static\"
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking if $compiler static flag $lt_tmp_static_flag works" >&5
++$as_echo_n "checking if $compiler static flag $lt_tmp_static_flag works... " >&6; }
++if test "${lt_cv_prog_compiler_static_works+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ lt_cv_prog_compiler_static_works=no
++ save_LDFLAGS="$LDFLAGS"
++ LDFLAGS="$LDFLAGS $lt_tmp_static_flag"
++ echo "$lt_simple_link_test_code" > conftest.$ac_ext
++ if (eval $ac_link 2>conftest.err) && test -s conftest$ac_exeext; then
++ # The linker can only warn and ignore the option if not recognized
++ # So say no if there are warnings
++ if test -s conftest.err; then
++ # Append any errors to the config.log.
++ cat conftest.err 1>&5
++ $ECHO "X$_lt_linker_boilerplate" | $Xsed -e '/^$/d' > conftest.exp
++ $SED '/^$/d; /^ *+/d' conftest.err >conftest.er2
++ if diff conftest.exp conftest.er2 >/dev/null; then
++ lt_cv_prog_compiler_static_works=yes
++ fi
++ else
++ lt_cv_prog_compiler_static_works=yes
++ fi
++ fi
++ $RM -r conftest*
++ LDFLAGS="$save_LDFLAGS"
++
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $lt_cv_prog_compiler_static_works" >&5
++$as_echo "$lt_cv_prog_compiler_static_works" >&6; }
++
++if test x"$lt_cv_prog_compiler_static_works" = xyes; then
++ :
++else
++ lt_prog_compiler_static=
++fi
++
++
++
++
++
++
++
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking if $compiler supports -c -o file.$ac_objext" >&5
++$as_echo_n "checking if $compiler supports -c -o file.$ac_objext... " >&6; }
++if test "${lt_cv_prog_compiler_c_o+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ lt_cv_prog_compiler_c_o=no
++ $RM -r conftest 2>/dev/null
++ mkdir conftest
++ cd conftest
++ mkdir out
++ echo "$lt_simple_compile_test_code" > conftest.$ac_ext
++
++ lt_compiler_flag="-o out/conftest2.$ac_objext"
++ # Insert the option either (1) after the last *FLAGS variable, or
++ # (2) before a word containing "conftest.", or (3) at the end.
++ # Note that $ac_compile itself does not contain backslashes and begins
++ # with a dollar sign (not a hyphen), so the echo should work correctly.
++ lt_compile=`echo "$ac_compile" | $SED \
++ -e 's:.*FLAGS}\{0,1\} :&$lt_compiler_flag :; t' \
++ -e 's: [^ ]*conftest\.: $lt_compiler_flag&:; t' \
++ -e 's:$: $lt_compiler_flag:'`
++ (eval echo "\"\$as_me:__oline__: $lt_compile\"" >&5)
++ (eval "$lt_compile" 2>out/conftest.err)
++ ac_status=$?
++ cat out/conftest.err >&5
++ echo "$as_me:__oline__: \$? = $ac_status" >&5
++ if (exit $ac_status) && test -s out/conftest2.$ac_objext
++ then
++ # The compiler can only warn and ignore the option if not recognized
++ # So say no if there are warnings
++ $ECHO "X$_lt_compiler_boilerplate" | $Xsed -e '/^$/d' > out/conftest.exp
++ $SED '/^$/d; /^ *+/d' out/conftest.err >out/conftest.er2
++ if test ! -s out/conftest.er2 || diff out/conftest.exp out/conftest.er2 >/dev/null; then
++ lt_cv_prog_compiler_c_o=yes
++ fi
++ fi
++ chmod u+w . 2>&5
++ $RM conftest*
++ # SGI C++ compiler will create directory out/ii_files/ for
++ # template instantiation
++ test -d out/ii_files && $RM out/ii_files/* && rmdir out/ii_files
++ $RM out/* && rmdir out
++ cd ..
++ $RM -r conftest
++ $RM conftest*
++
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $lt_cv_prog_compiler_c_o" >&5
++$as_echo "$lt_cv_prog_compiler_c_o" >&6; }
++
++
++
++
++
++
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking if $compiler supports -c -o file.$ac_objext" >&5
++$as_echo_n "checking if $compiler supports -c -o file.$ac_objext... " >&6; }
++if test "${lt_cv_prog_compiler_c_o+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ lt_cv_prog_compiler_c_o=no
++ $RM -r conftest 2>/dev/null
++ mkdir conftest
++ cd conftest
++ mkdir out
++ echo "$lt_simple_compile_test_code" > conftest.$ac_ext
++
++ lt_compiler_flag="-o out/conftest2.$ac_objext"
++ # Insert the option either (1) after the last *FLAGS variable, or
++ # (2) before a word containing "conftest.", or (3) at the end.
++ # Note that $ac_compile itself does not contain backslashes and begins
++ # with a dollar sign (not a hyphen), so the echo should work correctly.
++ lt_compile=`echo "$ac_compile" | $SED \
++ -e 's:.*FLAGS}\{0,1\} :&$lt_compiler_flag :; t' \
++ -e 's: [^ ]*conftest\.: $lt_compiler_flag&:; t' \
++ -e 's:$: $lt_compiler_flag:'`
++ (eval echo "\"\$as_me:__oline__: $lt_compile\"" >&5)
++ (eval "$lt_compile" 2>out/conftest.err)
++ ac_status=$?
++ cat out/conftest.err >&5
++ echo "$as_me:__oline__: \$? = $ac_status" >&5
++ if (exit $ac_status) && test -s out/conftest2.$ac_objext
++ then
++ # The compiler can only warn and ignore the option if not recognized
++ # So say no if there are warnings
++ $ECHO "X$_lt_compiler_boilerplate" | $Xsed -e '/^$/d' > out/conftest.exp
++ $SED '/^$/d; /^ *+/d' out/conftest.err >out/conftest.er2
++ if test ! -s out/conftest.er2 || diff out/conftest.exp out/conftest.er2 >/dev/null; then
++ lt_cv_prog_compiler_c_o=yes
++ fi
++ fi
++ chmod u+w . 2>&5
++ $RM conftest*
++ # SGI C++ compiler will create directory out/ii_files/ for
++ # template instantiation
++ test -d out/ii_files && $RM out/ii_files/* && rmdir out/ii_files
++ $RM out/* && rmdir out
++ cd ..
++ $RM -r conftest
++ $RM conftest*
++
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $lt_cv_prog_compiler_c_o" >&5
++$as_echo "$lt_cv_prog_compiler_c_o" >&6; }
++
++
++
++
++hard_links="nottested"
++if test "$lt_cv_prog_compiler_c_o" = no && test "$need_locks" != no; then
++ # do not overwrite the value of need_locks provided by the user
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking if we can lock with hard links" >&5
++$as_echo_n "checking if we can lock with hard links... " >&6; }
++ hard_links=yes
++ $RM conftest*
++ ln conftest.a conftest.b 2>/dev/null && hard_links=no
++ touch conftest.a
++ ln conftest.a conftest.b 2>&5 || hard_links=no
++ ln conftest.a conftest.b 2>/dev/null && hard_links=no
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $hard_links" >&5
++$as_echo "$hard_links" >&6; }
++ if test "$hard_links" = no; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: \`$CC' does not support \`-c -o', so \`make -j' may be unsafe" >&5
++$as_echo "$as_me: WARNING: \`$CC' does not support \`-c -o', so \`make -j' may be unsafe" >&2;}
++ need_locks=warn
++ fi
++else
++ need_locks=no
++fi
++
++
++
++
++
++
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking whether the $compiler linker ($LD) supports shared libraries" >&5
++$as_echo_n "checking whether the $compiler linker ($LD) supports shared libraries... " >&6; }
++
++ runpath_var=
++ allow_undefined_flag=
++ always_export_symbols=no
++ archive_cmds=
++ archive_expsym_cmds=
++ compiler_needs_object=no
++ enable_shared_with_static_runtimes=no
++ export_dynamic_flag_spec=
++ export_symbols_cmds='$NM $libobjs $convenience | $global_symbol_pipe | $SED '\''s/.* //'\'' | sort | uniq > $export_symbols'
++ hardcode_automatic=no
++ hardcode_direct=no
++ hardcode_direct_absolute=no
++ hardcode_libdir_flag_spec=
++ hardcode_libdir_flag_spec_ld=
++ hardcode_libdir_separator=
++ hardcode_minus_L=no
++ hardcode_shlibpath_var=unsupported
++ inherit_rpath=no
++ link_all_deplibs=unknown
++ module_cmds=
++ module_expsym_cmds=
++ old_archive_from_new_cmds=
++ old_archive_from_expsyms_cmds=
++ thread_safe_flag_spec=
++ whole_archive_flag_spec=
++ # include_expsyms should be a list of space-separated symbols to be *always*
++ # included in the symbol list
++ include_expsyms=
++ # exclude_expsyms can be an extended regexp of symbols to exclude
++ # it will be wrapped by ` (' and `)$', so one must not match beginning or
++ # end of line. Example: `a|bc|.*d.*' will exclude the symbols `a' and `bc',
++ # as well as any symbol that contains `d'.
++ exclude_expsyms='_GLOBAL_OFFSET_TABLE_|_GLOBAL__F[ID]_.*'
++ # Although _GLOBAL_OFFSET_TABLE_ is a valid symbol C name, most a.out
++ # platforms (ab)use it in PIC code, but their linkers get confused if
++ # the symbol is explicitly referenced. Since portable code cannot
++ # rely on this symbol name, it's probably fine to never include it in
++ # preloaded symbol tables.
++ # Exclude shared library initialization/finalization symbols.
++ extract_expsyms_cmds=
++
++ case $host_os in
++ cygwin* | mingw* | pw32* | cegcc*)
++ # FIXME: the MSVC++ port hasn't been tested in a loooong time
++ # When not using gcc, we currently assume that we are using
++ # Microsoft Visual C++.
++ if test "$GCC" != yes; then
++ with_gnu_ld=no
++ fi
++ ;;
++ interix*)
++ # we just hope/assume this is gcc and not c89 (= MSVC++)
++ with_gnu_ld=yes
++ ;;
++ openbsd*)
++ with_gnu_ld=no
++ ;;
++ esac
++
++ ld_shlibs=yes
++ if test "$with_gnu_ld" = yes; then
++ # If archive_cmds runs LD, not CC, wlarc should be empty
++ wlarc='${wl}'
++
++ # Set some defaults for GNU ld with shared library support. These
++ # are reset later if shared libraries are not supported. Putting them
++ # here allows them to be overridden if necessary.
++ runpath_var=LD_RUN_PATH
++ hardcode_libdir_flag_spec='${wl}-rpath ${wl}$libdir'
++ export_dynamic_flag_spec='${wl}--export-dynamic'
++ # ancient GNU ld didn't support --whole-archive et. al.
++ if $LD --help 2>&1 | $GREP 'no-whole-archive' > /dev/null; then
++ whole_archive_flag_spec="$wlarc"'--whole-archive$convenience '"$wlarc"'--no-whole-archive'
++ else
++ whole_archive_flag_spec=
++ fi
++ supports_anon_versioning=no
++ case `$LD -v 2>&1` in
++ *\ [01].* | *\ 2.[0-9].* | *\ 2.10.*) ;; # catch versions < 2.11
++ *\ 2.11.93.0.2\ *) supports_anon_versioning=yes ;; # RH7.3 ...
++ *\ 2.11.92.0.12\ *) supports_anon_versioning=yes ;; # Mandrake 8.2 ...
++ *\ 2.11.*) ;; # other 2.11 versions
++ *) supports_anon_versioning=yes ;;
++ esac
++
++ # See if GNU ld supports shared libraries.
++ case $host_os in
++ aix[3-9]*)
++ # On AIX/PPC, the GNU linker is very broken
++ if test "$host_cpu" != ia64; then
++ ld_shlibs=no
++ cat <<_LT_EOF 1>&2
++
++*** Warning: the GNU linker, at least up to release 2.9.1, is reported
++*** to be unable to reliably create shared libraries on AIX.
++*** Therefore, libtool is disabling shared libraries support. If you
++*** really care for shared libraries, you may want to modify your PATH
++*** so that a non-GNU linker is found, and then restart.
++
++_LT_EOF
++ fi
++ ;;
++
++ amigaos*)
++ case $host_cpu in
++ powerpc)
++ # see comment about AmigaOS4 .so support
++ archive_cmds='$CC -shared $libobjs $deplibs $compiler_flags ${wl}-soname $wl$soname -o $lib'
++ archive_expsym_cmds=''
++ ;;
++ m68k)
++ archive_cmds='$RM $output_objdir/a2ixlibrary.data~$ECHO "#define NAME $libname" > $output_objdir/a2ixlibrary.data~$ECHO "#define LIBRARY_ID 1" >> $output_objdir/a2ixlibrary.data~$ECHO "#define VERSION $major" >> $output_objdir/a2ixlibrary.data~$ECHO "#define REVISION $revision" >> $output_objdir/a2ixlibrary.data~$AR $AR_FLAGS $lib $libobjs~$RANLIB $lib~(cd $output_objdir && a2ixlibrary -32)'
++ hardcode_libdir_flag_spec='-L$libdir'
++ hardcode_minus_L=yes
++ ;;
++ esac
++ ;;
++
++ beos*)
++ if $LD --help 2>&1 | $GREP ': supported targets:.* elf' > /dev/null; then
++ allow_undefined_flag=unsupported
++ # Joseph Beckenbach <jrb3 at best.com> says some releases of gcc
++ # support --undefined. This deserves some investigation. FIXME
++ archive_cmds='$CC -nostart $libobjs $deplibs $compiler_flags ${wl}-soname $wl$soname -o $lib'
++ else
++ ld_shlibs=no
++ fi
++ ;;
++
++ cygwin* | mingw* | pw32* | cegcc*)
++ # _LT_TAGVAR(hardcode_libdir_flag_spec, ) is actually meaningless,
++ # as there is no search path for DLLs.
++ hardcode_libdir_flag_spec='-L$libdir'
++ allow_undefined_flag=unsupported
++ always_export_symbols=no
++ enable_shared_with_static_runtimes=yes
++ export_symbols_cmds='$NM $libobjs $convenience | $global_symbol_pipe | $SED -e '\''/^[BCDGRS][ ]/s/.*[ ]\([^ ]*\)/\1 DATA/'\'' | $SED -e '\''/^[AITW][ ]/s/.*[ ]//'\'' | sort | uniq > $export_symbols'
++
++ if $LD --help 2>&1 | $GREP 'auto-import' > /dev/null; then
++ archive_cmds='$CC -shared $libobjs $deplibs $compiler_flags -o $output_objdir/$soname ${wl}--enable-auto-image-base -Xlinker --out-implib -Xlinker $lib'
++ # If the export-symbols file already is a .def file (1st line
++ # is EXPORTS), use it as is; otherwise, prepend...
++ archive_expsym_cmds='if test "x`$SED 1q $export_symbols`" = xEXPORTS; then
++ cp $export_symbols $output_objdir/$soname.def;
++ else
++ echo EXPORTS > $output_objdir/$soname.def;
++ cat $export_symbols >> $output_objdir/$soname.def;
++ fi~
++ $CC -shared $output_objdir/$soname.def $libobjs $deplibs $compiler_flags -o $output_objdir/$soname ${wl}--enable-auto-image-base -Xlinker --out-implib -Xlinker $lib'
++ else
++ ld_shlibs=no
++ fi
++ ;;
++
++ interix[3-9]*)
++ hardcode_direct=no
++ hardcode_shlibpath_var=no
++ hardcode_libdir_flag_spec='${wl}-rpath,$libdir'
++ export_dynamic_flag_spec='${wl}-E'
++ # Hack: On Interix 3.x, we cannot compile PIC because of a broken gcc.
++ # Instead, shared libraries are loaded at an image base (0x10000000 by
++ # default) and relocated if they conflict, which is a slow very memory
++ # consuming and fragmenting process. To avoid this, we pick a random,
++ # 256 KiB-aligned image base between 0x50000000 and 0x6FFC0000 at link
++ # time. Moving up from 0x10000000 also allows more sbrk(2) space.
++ archive_cmds='$CC -shared $pic_flag $libobjs $deplibs $compiler_flags ${wl}-h,$soname ${wl}--image-base,`expr ${RANDOM-$$} % 4096 / 2 \* 262144 + 1342177280` -o $lib'
++ archive_expsym_cmds='sed "s,^,_," $export_symbols >$output_objdir/$soname.expsym~$CC -shared $pic_flag $libobjs $deplibs $compiler_flags ${wl}-h,$soname ${wl}--retain-symbols-file,$output_objdir/$soname.expsym ${wl}--image-base,`expr ${RANDOM-$$} % 4096 / 2 \* 262144 + 1342177280` -o $lib'
++ ;;
++
++ gnu* | linux* | tpf* | k*bsd*-gnu)
++ tmp_diet=no
++ if test "$host_os" = linux-dietlibc; then
++ case $cc_basename in
++ diet\ *) tmp_diet=yes;; # linux-dietlibc with static linking (!diet-dyn)
++ esac
++ fi
++ if $LD --help 2>&1 | $EGREP ': supported targets:.* elf' > /dev/null \
++ && test "$tmp_diet" = no
++ then
++ tmp_addflag=
++ tmp_sharedflag='-shared'
++ case $cc_basename,$host_cpu in
++ pgcc*) # Portland Group C compiler
++ whole_archive_flag_spec='${wl}--whole-archive`for conv in $convenience\"\"; do test -n \"$conv\" && new_convenience=\"$new_convenience,$conv\"; done; $ECHO \"$new_convenience\"` ${wl}--no-whole-archive'
++ tmp_addflag=' $pic_flag'
++ ;;
++ pgf77* | pgf90* | pgf95*) # Portland Group f77 and f90 compilers
++ whole_archive_flag_spec='${wl}--whole-archive`for conv in $convenience\"\"; do test -n \"$conv\" && new_convenience=\"$new_convenience,$conv\"; done; $ECHO \"$new_convenience\"` ${wl}--no-whole-archive'
++ tmp_addflag=' $pic_flag -Mnomain' ;;
++ ecc*,ia64* | icc*,ia64*) # Intel C compiler on ia64
++ tmp_addflag=' -i_dynamic' ;;
++ efc*,ia64* | ifort*,ia64*) # Intel Fortran compiler on ia64
++ tmp_addflag=' -i_dynamic -nofor_main' ;;
++ ifc* | ifort*) # Intel Fortran compiler
++ tmp_addflag=' -nofor_main' ;;
++ lf95*) # Lahey Fortran 8.1
++ whole_archive_flag_spec=
++ tmp_sharedflag='--shared' ;;
++ xl[cC]*) # IBM XL C 8.0 on PPC (deal with xlf below)
++ tmp_sharedflag='-qmkshrobj'
++ tmp_addflag= ;;
++ esac
++ case `$CC -V 2>&1 | sed 5q` in
++ *Sun\ C*) # Sun C 5.9
++ whole_archive_flag_spec='${wl}--whole-archive`new_convenience=; for conv in $convenience\"\"; do test -z \"$conv\" || new_convenience=\"$new_convenience,$conv\"; done; $ECHO \"$new_convenience\"` ${wl}--no-whole-archive'
++ compiler_needs_object=yes
++ tmp_sharedflag='-G' ;;
++ *Sun\ F*) # Sun Fortran 8.3
++ tmp_sharedflag='-G' ;;
++ esac
++ archive_cmds='$CC '"$tmp_sharedflag""$tmp_addflag"' $libobjs $deplibs $compiler_flags ${wl}-soname $wl$soname -o $lib'
++
++ if test "x$supports_anon_versioning" = xyes; then
++ archive_expsym_cmds='echo "{ global:" > $output_objdir/$libname.ver~
++ cat $export_symbols | sed -e "s/\(.*\)/\1;/" >> $output_objdir/$libname.ver~
++ echo "local: *; };" >> $output_objdir/$libname.ver~
++ $CC '"$tmp_sharedflag""$tmp_addflag"' $libobjs $deplibs $compiler_flags ${wl}-soname $wl$soname ${wl}-version-script ${wl}$output_objdir/$libname.ver -o $lib'
++ fi
++
++ case $cc_basename in
++ xlf*)
++ # IBM XL Fortran 10.1 on PPC cannot create shared libs itself
++ whole_archive_flag_spec='--whole-archive$convenience --no-whole-archive'
++ hardcode_libdir_flag_spec=
++ hardcode_libdir_flag_spec_ld='-rpath $libdir'
++ archive_cmds='$LD -shared $libobjs $deplibs $compiler_flags -soname $soname -o $lib'
++ if test "x$supports_anon_versioning" = xyes; then
++ archive_expsym_cmds='echo "{ global:" > $output_objdir/$libname.ver~
++ cat $export_symbols | sed -e "s/\(.*\)/\1;/" >> $output_objdir/$libname.ver~
++ echo "local: *; };" >> $output_objdir/$libname.ver~
++ $LD -shared $libobjs $deplibs $compiler_flags -soname $soname -version-script $output_objdir/$libname.ver -o $lib'
++ fi
++ ;;
++ esac
++ else
++ ld_shlibs=no
++ fi
++ ;;
++
++ netbsd*)
++ if echo __ELF__ | $CC -E - | $GREP __ELF__ >/dev/null; then
++ archive_cmds='$LD -Bshareable $libobjs $deplibs $linker_flags -o $lib'
++ wlarc=
++ else
++ archive_cmds='$CC -shared $libobjs $deplibs $compiler_flags ${wl}-soname $wl$soname -o $lib'
++ archive_expsym_cmds='$CC -shared $libobjs $deplibs $compiler_flags ${wl}-soname $wl$soname ${wl}-retain-symbols-file $wl$export_symbols -o $lib'
++ fi
++ ;;
++
++ solaris*)
++ if $LD -v 2>&1 | $GREP 'BFD 2\.8' > /dev/null; then
++ ld_shlibs=no
++ cat <<_LT_EOF 1>&2
++
++*** Warning: The releases 2.8.* of the GNU linker cannot reliably
++*** create shared libraries on Solaris systems. Therefore, libtool
++*** is disabling shared libraries support. We urge you to upgrade GNU
++*** binutils to release 2.9.1 or newer. Another option is to modify
++*** your PATH or compiler configuration so that the native linker is
++*** used, and then restart.
++
++_LT_EOF
++ elif $LD --help 2>&1 | $GREP ': supported targets:.* elf' > /dev/null; then
++ archive_cmds='$CC -shared $libobjs $deplibs $compiler_flags ${wl}-soname $wl$soname -o $lib'
++ archive_expsym_cmds='$CC -shared $libobjs $deplibs $compiler_flags ${wl}-soname $wl$soname ${wl}-retain-symbols-file $wl$export_symbols -o $lib'
++ else
++ ld_shlibs=no
++ fi
++ ;;
++
++ sysv5* | sco3.2v5* | sco5v6* | unixware* | OpenUNIX*)
++ case `$LD -v 2>&1` in
++ *\ [01].* | *\ 2.[0-9].* | *\ 2.1[0-5].*)
++ ld_shlibs=no
++ cat <<_LT_EOF 1>&2
++
++*** Warning: Releases of the GNU linker prior to 2.16.91.0.3 can not
++*** reliably create shared libraries on SCO systems. Therefore, libtool
++*** is disabling shared libraries support. We urge you to upgrade GNU
++*** binutils to release 2.16.91.0.3 or newer. Another option is to modify
++*** your PATH or compiler configuration so that the native linker is
++*** used, and then restart.
++
++_LT_EOF
++ ;;
++ *)
++ # For security reasons, it is highly recommended that you always
++ # use absolute paths for naming shared libraries, and exclude the
++ # DT_RUNPATH tag from executables and libraries. But doing so
++ # requires that you compile everything twice, which is a pain.
++ if $LD --help 2>&1 | $GREP ': supported targets:.* elf' > /dev/null; then
++ hardcode_libdir_flag_spec='${wl}-rpath ${wl}$libdir'
++ archive_cmds='$CC -shared $libobjs $deplibs $compiler_flags ${wl}-soname $wl$soname -o $lib'
++ archive_expsym_cmds='$CC -shared $libobjs $deplibs $compiler_flags ${wl}-soname $wl$soname ${wl}-retain-symbols-file $wl$export_symbols -o $lib'
++ else
++ ld_shlibs=no
++ fi
++ ;;
++ esac
++ ;;
++
++ sunos4*)
++ archive_cmds='$LD -assert pure-text -Bshareable -o $lib $libobjs $deplibs $linker_flags'
++ wlarc=
++ hardcode_direct=yes
++ hardcode_shlibpath_var=no
++ ;;
++
++ *)
++ if $LD --help 2>&1 | $GREP ': supported targets:.* elf' > /dev/null; then
++ archive_cmds='$CC -shared $libobjs $deplibs $compiler_flags ${wl}-soname $wl$soname -o $lib'
++ archive_expsym_cmds='$CC -shared $libobjs $deplibs $compiler_flags ${wl}-soname $wl$soname ${wl}-retain-symbols-file $wl$export_symbols -o $lib'
++ else
++ ld_shlibs=no
++ fi
++ ;;
++ esac
++
++ if test "$ld_shlibs" = no; then
++ runpath_var=
++ hardcode_libdir_flag_spec=
++ export_dynamic_flag_spec=
++ whole_archive_flag_spec=
++ fi
++ else
++ # PORTME fill in a description of your system's linker (not GNU ld)
++ case $host_os in
++ aix3*)
++ allow_undefined_flag=unsupported
++ always_export_symbols=yes
++ archive_expsym_cmds='$LD -o $output_objdir/$soname $libobjs $deplibs $linker_flags -bE:$export_symbols -T512 -H512 -bM:SRE~$AR $AR_FLAGS $lib $output_objdir/$soname'
++ # Note: this linker hardcodes the directories in LIBPATH if there
++ # are no directories specified by -L.
++ hardcode_minus_L=yes
++ if test "$GCC" = yes && test -z "$lt_prog_compiler_static"; then
++ # Neither direct hardcoding nor static linking is supported with a
++ # broken collect2.
++ hardcode_direct=unsupported
++ fi
++ ;;
++
++ aix[4-9]*)
++ if test "$host_cpu" = ia64; then
++ # On IA64, the linker does run time linking by default, so we don't
++ # have to do anything special.
++ aix_use_runtimelinking=no
++ exp_sym_flag='-Bexport'
++ no_entry_flag=""
++ else
++ # If we're using GNU nm, then we don't want the "-C" option.
++ # -C means demangle to AIX nm, but means don't demangle with GNU nm
++ if $NM -V 2>&1 | $GREP 'GNU' > /dev/null; then
++ export_symbols_cmds='$NM -Bpg $libobjs $convenience | awk '\''{ if (((\$ 2 == "T") || (\$ 2 == "D") || (\$ 2 == "B")) && (substr(\$ 3,1,1) != ".")) { print \$ 3 } }'\'' | sort -u > $export_symbols'
++ else
++ export_symbols_cmds='$NM -BCpg $libobjs $convenience | awk '\''{ if (((\$ 2 == "T") || (\$ 2 == "D") || (\$ 2 == "B")) && (substr(\$ 3,1,1) != ".")) { print \$ 3 } }'\'' | sort -u > $export_symbols'
++ fi
++ aix_use_runtimelinking=no
++
++ # Test if we are trying to use run time linking or normal
++ # AIX style linking. If -brtl is somewhere in LDFLAGS, we
++ # need to do runtime linking.
++ case $host_os in aix4.[23]|aix4.[23].*|aix[5-9]*)
++ for ld_flag in $LDFLAGS; do
++ if (test $ld_flag = "-brtl" || test $ld_flag = "-Wl,-brtl"); then
++ aix_use_runtimelinking=yes
++ break
++ fi
++ done
++ ;;
++ esac
++
++ exp_sym_flag='-bexport'
++ no_entry_flag='-bnoentry'
++ fi
++
++ # When large executables or shared objects are built, AIX ld can
++ # have problems creating the table of contents. If linking a library
++ # or program results in "error TOC overflow" add -mminimal-toc to
++ # CXXFLAGS/CFLAGS for g++/gcc. In the cases where that is not
++ # enough to fix the problem, add -Wl,-bbigtoc to LDFLAGS.
++
++ archive_cmds=''
++ hardcode_direct=yes
++ hardcode_direct_absolute=yes
++ hardcode_libdir_separator=':'
++ link_all_deplibs=yes
++ file_list_spec='${wl}-f,'
++
++ if test "$GCC" = yes; then
++ case $host_os in aix4.[012]|aix4.[012].*)
++ # We only want to do this on AIX 4.2 and lower, the check
++ # below for broken collect2 doesn't work under 4.3+
++ collect2name=`${CC} -print-prog-name=collect2`
++ if test -f "$collect2name" &&
++ strings "$collect2name" | $GREP resolve_lib_name >/dev/null
++ then
++ # We have reworked collect2
++ :
++ else
++ # We have old collect2
++ hardcode_direct=unsupported
++ # It fails to find uninstalled libraries when the uninstalled
++ # path is not listed in the libpath. Setting hardcode_minus_L
++ # to unsupported forces relinking
++ hardcode_minus_L=yes
++ hardcode_libdir_flag_spec='-L$libdir'
++ hardcode_libdir_separator=
++ fi
++ ;;
++ esac
++ shared_flag='-shared'
++ if test "$aix_use_runtimelinking" = yes; then
++ shared_flag="$shared_flag "'${wl}-G'
++ fi
++ else
++ # not using gcc
++ if test "$host_cpu" = ia64; then
++ # VisualAge C++, Version 5.5 for AIX 5L for IA-64, Beta 3 Release
++ # chokes on -Wl,-G. The following line is correct:
++ shared_flag='-G'
++ else
++ if test "$aix_use_runtimelinking" = yes; then
++ shared_flag='${wl}-G'
++ else
++ shared_flag='${wl}-bM:SRE'
++ fi
++ fi
++ fi
++
++ export_dynamic_flag_spec='${wl}-bexpall'
++ # It seems that -bexpall does not export symbols beginning with
++ # underscore (_), so it is better to generate a list of symbols to export.
++ always_export_symbols=yes
++ if test "$aix_use_runtimelinking" = yes; then
++ # Warning - without using the other runtime loading flags (-brtl),
++ # -berok will link without error, but may produce a broken library.
++ allow_undefined_flag='-berok'
++ # Determine the default libpath from the value encoded in an
++ # empty executable.
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++int
++main ()
++{
++
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_link "$LINENO"; then :
++
++lt_aix_libpath_sed='
++ /Import File Strings/,/^$/ {
++ /^0/ {
++ s/^0 *\(.*\)$/\1/
++ p
++ }
++ }'
++aix_libpath=`dump -H conftest$ac_exeext 2>/dev/null | $SED -n -e "$lt_aix_libpath_sed"`
++# Check for a 64-bit object if we didn't find anything.
++if test -z "$aix_libpath"; then
++ aix_libpath=`dump -HX64 conftest$ac_exeext 2>/dev/null | $SED -n -e "$lt_aix_libpath_sed"`
++fi
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext conftest.$ac_ext
++if test -z "$aix_libpath"; then aix_libpath="/usr/lib:/lib"; fi
++
++ hardcode_libdir_flag_spec='${wl}-blibpath:$libdir:'"$aix_libpath"
++ archive_expsym_cmds='$CC -o $output_objdir/$soname $libobjs $deplibs '"\${wl}$no_entry_flag"' $compiler_flags `if test "x${allow_undefined_flag}" != "x"; then $ECHO "X${wl}${allow_undefined_flag}" | $Xsed; else :; fi` '"\${wl}$exp_sym_flag:\$export_symbols $shared_flag"
++ else
++ if test "$host_cpu" = ia64; then
++ hardcode_libdir_flag_spec='${wl}-R $libdir:/usr/lib:/lib'
++ allow_undefined_flag="-z nodefs"
++ archive_expsym_cmds="\$CC $shared_flag"' -o $output_objdir/$soname $libobjs $deplibs '"\${wl}$no_entry_flag"' $compiler_flags ${wl}${allow_undefined_flag} '"\${wl}$exp_sym_flag:\$export_symbols"
++ else
++ # Determine the default libpath from the value encoded in an
++ # empty executable.
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++int
++main ()
++{
++
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_link "$LINENO"; then :
++
++lt_aix_libpath_sed='
++ /Import File Strings/,/^$/ {
++ /^0/ {
++ s/^0 *\(.*\)$/\1/
++ p
++ }
++ }'
++aix_libpath=`dump -H conftest$ac_exeext 2>/dev/null | $SED -n -e "$lt_aix_libpath_sed"`
++# Check for a 64-bit object if we didn't find anything.
++if test -z "$aix_libpath"; then
++ aix_libpath=`dump -HX64 conftest$ac_exeext 2>/dev/null | $SED -n -e "$lt_aix_libpath_sed"`
++fi
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext conftest.$ac_ext
++if test -z "$aix_libpath"; then aix_libpath="/usr/lib:/lib"; fi
++
++ hardcode_libdir_flag_spec='${wl}-blibpath:$libdir:'"$aix_libpath"
++ # Warning - without using the other run time loading flags,
++ # -berok will link without error, but may produce a broken library.
++ no_undefined_flag=' ${wl}-bernotok'
++ allow_undefined_flag=' ${wl}-berok'
++ # Exported symbols can be pulled into shared objects from archives
++ whole_archive_flag_spec='$convenience'
++ archive_cmds_need_lc=yes
++ # This is similar to how AIX traditionally builds its shared libraries.
++ archive_expsym_cmds="\$CC $shared_flag"' -o $output_objdir/$soname $libobjs $deplibs ${wl}-bnoentry $compiler_flags ${wl}-bE:$export_symbols${allow_undefined_flag}~$AR $AR_FLAGS $output_objdir/$libname$release.a $output_objdir/$soname'
++ fi
++ fi
++ ;;
++
++ amigaos*)
++ case $host_cpu in
++ powerpc)
++ # see comment about AmigaOS4 .so support
++ archive_cmds='$CC -shared $libobjs $deplibs $compiler_flags ${wl}-soname $wl$soname -o $lib'
++ archive_expsym_cmds=''
++ ;;
++ m68k)
++ archive_cmds='$RM $output_objdir/a2ixlibrary.data~$ECHO "#define NAME $libname" > $output_objdir/a2ixlibrary.data~$ECHO "#define LIBRARY_ID 1" >> $output_objdir/a2ixlibrary.data~$ECHO "#define VERSION $major" >> $output_objdir/a2ixlibrary.data~$ECHO "#define REVISION $revision" >> $output_objdir/a2ixlibrary.data~$AR $AR_FLAGS $lib $libobjs~$RANLIB $lib~(cd $output_objdir && a2ixlibrary -32)'
++ hardcode_libdir_flag_spec='-L$libdir'
++ hardcode_minus_L=yes
++ ;;
++ esac
++ ;;
++
++ bsdi[45]*)
++ export_dynamic_flag_spec=-rdynamic
++ ;;
++
++ cygwin* | mingw* | pw32* | cegcc*)
++ # When not using gcc, we currently assume that we are using
++ # Microsoft Visual C++.
++ # hardcode_libdir_flag_spec is actually meaningless, as there is
++ # no search path for DLLs.
++ hardcode_libdir_flag_spec=' '
++ allow_undefined_flag=unsupported
++ # Tell ltmain to make .lib files, not .a files.
++ libext=lib
++ # Tell ltmain to make .dll files, not .so files.
++ shrext_cmds=".dll"
++ # FIXME: Setting linknames here is a bad hack.
++ archive_cmds='$CC -o $lib $libobjs $compiler_flags `$ECHO "X$deplibs" | $Xsed -e '\''s/ -lc$//'\''` -link -dll~linknames='
++ # The linker will automatically build a .lib file if we build a DLL.
++ old_archive_from_new_cmds='true'
++ # FIXME: Should let the user specify the lib program.
++ old_archive_cmds='lib -OUT:$oldlib$oldobjs$old_deplibs'
++ fix_srcfile_path='`cygpath -w "$srcfile"`'
++ enable_shared_with_static_runtimes=yes
++ ;;
++
++ darwin* | rhapsody*)
++
++
++ archive_cmds_need_lc=no
++ hardcode_direct=no
++ hardcode_automatic=yes
++ hardcode_shlibpath_var=unsupported
++ whole_archive_flag_spec=''
++ link_all_deplibs=yes
++ allow_undefined_flag="$_lt_dar_allow_undefined"
++ case $cc_basename in
++ ifort*) _lt_dar_can_shared=yes ;;
++ *) _lt_dar_can_shared=$GCC ;;
++ esac
++ if test "$_lt_dar_can_shared" = "yes"; then
++ output_verbose_link_cmd=echo
++ archive_cmds="\$CC -dynamiclib \$allow_undefined_flag -o \$lib \$libobjs \$deplibs \$compiler_flags -install_name \$rpath/\$soname \$verstring $_lt_dar_single_mod${_lt_dsymutil}"
++ module_cmds="\$CC \$allow_undefined_flag -o \$lib -bundle \$libobjs \$deplibs \$compiler_flags${_lt_dsymutil}"
++ archive_expsym_cmds="sed 's,^,_,' < \$export_symbols > \$output_objdir/\${libname}-symbols.expsym~\$CC -dynamiclib \$allow_undefined_flag -o \$lib \$libobjs \$deplibs \$compiler_flags -install_name \$rpath/\$soname \$verstring ${_lt_dar_single_mod}${_lt_dar_export_syms}${_lt_dsymutil}"
++ module_expsym_cmds="sed -e 's,^,_,' < \$export_symbols > \$output_objdir/\${libname}-symbols.expsym~\$CC \$allow_undefined_flag -o \$lib -bundle \$libobjs \$deplibs \$compiler_flags${_lt_dar_export_syms}${_lt_dsymutil}"
++
++ else
++ ld_shlibs=no
++ fi
++
++ ;;
++
++ dgux*)
++ archive_cmds='$LD -G -h $soname -o $lib $libobjs $deplibs $linker_flags'
++ hardcode_libdir_flag_spec='-L$libdir'
++ hardcode_shlibpath_var=no
++ ;;
++
++ freebsd1*)
++ ld_shlibs=no
++ ;;
++
++ # FreeBSD 2.2.[012] allows us to include c++rt0.o to get C++ constructor
++ # support. Future versions do this automatically, but an explicit c++rt0.o
++ # does not break anything, and helps significantly (at the cost of a little
++ # extra space).
++ freebsd2.2*)
++ archive_cmds='$LD -Bshareable -o $lib $libobjs $deplibs $linker_flags /usr/lib/c++rt0.o'
++ hardcode_libdir_flag_spec='-R$libdir'
++ hardcode_direct=yes
++ hardcode_shlibpath_var=no
++ ;;
++
++ # Unfortunately, older versions of FreeBSD 2 do not have this feature.
++ freebsd2*)
++ archive_cmds='$LD -Bshareable -o $lib $libobjs $deplibs $linker_flags'
++ hardcode_direct=yes
++ hardcode_minus_L=yes
++ hardcode_shlibpath_var=no
++ ;;
++
++ # FreeBSD 3 and greater uses gcc -shared to do shared libraries.
++ freebsd* | dragonfly*)
++ archive_cmds='$CC -shared -o $lib $libobjs $deplibs $compiler_flags'
++ hardcode_libdir_flag_spec='-R$libdir'
++ hardcode_direct=yes
++ hardcode_shlibpath_var=no
++ ;;
++
++ hpux9*)
++ if test "$GCC" = yes; then
++ archive_cmds='$RM $output_objdir/$soname~$CC -shared -fPIC ${wl}+b ${wl}$install_libdir -o $output_objdir/$soname $libobjs $deplibs $compiler_flags~test $output_objdir/$soname = $lib || mv $output_objdir/$soname $lib'
++ else
++ archive_cmds='$RM $output_objdir/$soname~$LD -b +b $install_libdir -o $output_objdir/$soname $libobjs $deplibs $linker_flags~test $output_objdir/$soname = $lib || mv $output_objdir/$soname $lib'
++ fi
++ hardcode_libdir_flag_spec='${wl}+b ${wl}$libdir'
++ hardcode_libdir_separator=:
++ hardcode_direct=yes
++
++ # hardcode_minus_L: Not really in the search PATH,
++ # but as the default location of the library.
++ hardcode_minus_L=yes
++ export_dynamic_flag_spec='${wl}-E'
++ ;;
++
++ hpux10*)
++ if test "$GCC" = yes -a "$with_gnu_ld" = no; then
++ archive_cmds='$CC -shared -fPIC ${wl}+h ${wl}$soname ${wl}+b ${wl}$install_libdir -o $lib $libobjs $deplibs $compiler_flags'
++ else
++ archive_cmds='$LD -b +h $soname +b $install_libdir -o $lib $libobjs $deplibs $linker_flags'
++ fi
++ if test "$with_gnu_ld" = no; then
++ hardcode_libdir_flag_spec='${wl}+b ${wl}$libdir'
++ hardcode_libdir_flag_spec_ld='+b $libdir'
++ hardcode_libdir_separator=:
++ hardcode_direct=yes
++ hardcode_direct_absolute=yes
++ export_dynamic_flag_spec='${wl}-E'
++ # hardcode_minus_L: Not really in the search PATH,
++ # but as the default location of the library.
++ hardcode_minus_L=yes
++ fi
++ ;;
++
++ hpux11*)
++ if test "$GCC" = yes -a "$with_gnu_ld" = no; then
++ case $host_cpu in
++ hppa*64*)
++ archive_cmds='$CC -shared ${wl}+h ${wl}$soname -o $lib $libobjs $deplibs $compiler_flags'
++ ;;
++ ia64*)
++ archive_cmds='$CC -shared -fPIC ${wl}+h ${wl}$soname ${wl}+nodefaultrpath -o $lib $libobjs $deplibs $compiler_flags'
++ ;;
++ *)
++ archive_cmds='$CC -shared -fPIC ${wl}+h ${wl}$soname ${wl}+b ${wl}$install_libdir -o $lib $libobjs $deplibs $compiler_flags'
++ ;;
++ esac
++ else
++ case $host_cpu in
++ hppa*64*)
++ archive_cmds='$CC -b ${wl}+h ${wl}$soname -o $lib $libobjs $deplibs $compiler_flags'
++ ;;
++ ia64*)
++ archive_cmds='$CC -b ${wl}+h ${wl}$soname ${wl}+nodefaultrpath -o $lib $libobjs $deplibs $compiler_flags'
++ ;;
++ *)
++ archive_cmds='$CC -b ${wl}+h ${wl}$soname ${wl}+b ${wl}$install_libdir -o $lib $libobjs $deplibs $compiler_flags'
++ ;;
++ esac
++ fi
++ if test "$with_gnu_ld" = no; then
++ hardcode_libdir_flag_spec='${wl}+b ${wl}$libdir'
++ hardcode_libdir_separator=:
++
++ case $host_cpu in
++ hppa*64*|ia64*)
++ hardcode_direct=no
++ hardcode_shlibpath_var=no
++ ;;
++ *)
++ hardcode_direct=yes
++ hardcode_direct_absolute=yes
++ export_dynamic_flag_spec='${wl}-E'
++
++ # hardcode_minus_L: Not really in the search PATH,
++ # but as the default location of the library.
++ hardcode_minus_L=yes
++ ;;
++ esac
++ fi
++ ;;
++
++ irix5* | irix6* | nonstopux*)
++ if test "$GCC" = yes; then
++ archive_cmds='$CC -shared $libobjs $deplibs $compiler_flags ${wl}-soname ${wl}$soname `test -n "$verstring" && $ECHO "X${wl}-set_version ${wl}$verstring" | $Xsed` ${wl}-update_registry ${wl}${output_objdir}/so_locations -o $lib'
++ # Try to use the -exported_symbol ld option, if it does not
++ # work, assume that -exports_file does not work either and
++ # implicitly export all symbols.
++ save_LDFLAGS="$LDFLAGS"
++ LDFLAGS="$LDFLAGS -shared ${wl}-exported_symbol ${wl}foo ${wl}-update_registry ${wl}/dev/null"
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++int foo(void) {}
++_ACEOF
++if ac_fn_c_try_link "$LINENO"; then :
++ archive_expsym_cmds='$CC -shared $libobjs $deplibs $compiler_flags ${wl}-soname ${wl}$soname `test -n "$verstring" && $ECHO "X${wl}-set_version ${wl}$verstring" | $Xsed` ${wl}-update_registry ${wl}${output_objdir}/so_locations ${wl}-exports_file ${wl}$export_symbols -o $lib'
++
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext conftest.$ac_ext
++ LDFLAGS="$save_LDFLAGS"
++ else
++ archive_cmds='$CC -shared $libobjs $deplibs $compiler_flags -soname $soname `test -n "$verstring" && $ECHO "X-set_version $verstring" | $Xsed` -update_registry ${output_objdir}/so_locations -o $lib'
++ archive_expsym_cmds='$CC -shared $libobjs $deplibs $compiler_flags -soname $soname `test -n "$verstring" && $ECHO "X-set_version $verstring" | $Xsed` -update_registry ${output_objdir}/so_locations -exports_file $export_symbols -o $lib'
++ fi
++ archive_cmds_need_lc='no'
++ hardcode_libdir_flag_spec='${wl}-rpath ${wl}$libdir'
++ hardcode_libdir_separator=:
++ inherit_rpath=yes
++ link_all_deplibs=yes
++ ;;
++
++ netbsd*)
++ if echo __ELF__ | $CC -E - | $GREP __ELF__ >/dev/null; then
++ archive_cmds='$LD -Bshareable -o $lib $libobjs $deplibs $linker_flags' # a.out
++ else
++ archive_cmds='$LD -shared -o $lib $libobjs $deplibs $linker_flags' # ELF
++ fi
++ hardcode_libdir_flag_spec='-R$libdir'
++ hardcode_direct=yes
++ hardcode_shlibpath_var=no
++ ;;
++
++ newsos6)
++ archive_cmds='$LD -G -h $soname -o $lib $libobjs $deplibs $linker_flags'
++ hardcode_direct=yes
++ hardcode_libdir_flag_spec='${wl}-rpath ${wl}$libdir'
++ hardcode_libdir_separator=:
++ hardcode_shlibpath_var=no
++ ;;
++
++ *nto* | *qnx*)
++ ;;
++
++ openbsd*)
++ if test -f /usr/libexec/ld.so; then
++ hardcode_direct=yes
++ hardcode_shlibpath_var=no
++ hardcode_direct_absolute=yes
++ if test -z "`echo __ELF__ | $CC -E - | $GREP __ELF__`" || test "$host_os-$host_cpu" = "openbsd2.8-powerpc"; then
++ archive_cmds='$CC -shared $pic_flag -o $lib $libobjs $deplibs $compiler_flags'
++ archive_expsym_cmds='$CC -shared $pic_flag -o $lib $libobjs $deplibs $compiler_flags ${wl}-retain-symbols-file,$export_symbols'
++ hardcode_libdir_flag_spec='${wl}-rpath,$libdir'
++ export_dynamic_flag_spec='${wl}-E'
++ else
++ case $host_os in
++ openbsd[01].* | openbsd2.[0-7] | openbsd2.[0-7].*)
++ archive_cmds='$LD -Bshareable -o $lib $libobjs $deplibs $linker_flags'
++ hardcode_libdir_flag_spec='-R$libdir'
++ ;;
++ *)
++ archive_cmds='$CC -shared $pic_flag -o $lib $libobjs $deplibs $compiler_flags'
++ hardcode_libdir_flag_spec='${wl}-rpath,$libdir'
++ ;;
++ esac
++ fi
++ else
++ ld_shlibs=no
++ fi
++ ;;
++
++ os2*)
++ hardcode_libdir_flag_spec='-L$libdir'
++ hardcode_minus_L=yes
++ allow_undefined_flag=unsupported
++ archive_cmds='$ECHO "LIBRARY $libname INITINSTANCE" > $output_objdir/$libname.def~$ECHO "DESCRIPTION \"$libname\"" >> $output_objdir/$libname.def~$ECHO DATA >> $output_objdir/$libname.def~$ECHO " SINGLE NONSHARED" >> $output_objdir/$libname.def~$ECHO EXPORTS >> $output_objdir/$libname.def~emxexp $libobjs >> $output_objdir/$libname.def~$CC -Zdll -Zcrtdll -o $lib $libobjs $deplibs $compiler_flags $output_objdir/$libname.def'
++ old_archive_from_new_cmds='emximp -o $output_objdir/$libname.a $output_objdir/$libname.def'
++ ;;
++
++ osf3*)
++ if test "$GCC" = yes; then
++ allow_undefined_flag=' ${wl}-expect_unresolved ${wl}\*'
++ archive_cmds='$CC -shared${allow_undefined_flag} $libobjs $deplibs $compiler_flags ${wl}-soname ${wl}$soname `test -n "$verstring" && $ECHO "X${wl}-set_version ${wl}$verstring" | $Xsed` ${wl}-update_registry ${wl}${output_objdir}/so_locations -o $lib'
++ else
++ allow_undefined_flag=' -expect_unresolved \*'
++ archive_cmds='$CC -shared${allow_undefined_flag} $libobjs $deplibs $compiler_flags -soname $soname `test -n "$verstring" && $ECHO "X-set_version $verstring" | $Xsed` -update_registry ${output_objdir}/so_locations -o $lib'
++ fi
++ archive_cmds_need_lc='no'
++ hardcode_libdir_flag_spec='${wl}-rpath ${wl}$libdir'
++ hardcode_libdir_separator=:
++ ;;
++
++ osf4* | osf5*) # as osf3* with the addition of -msym flag
++ if test "$GCC" = yes; then
++ allow_undefined_flag=' ${wl}-expect_unresolved ${wl}\*'
++ archive_cmds='$CC -shared${allow_undefined_flag} $libobjs $deplibs $compiler_flags ${wl}-msym ${wl}-soname ${wl}$soname `test -n "$verstring" && $ECHO "X${wl}-set_version ${wl}$verstring" | $Xsed` ${wl}-update_registry ${wl}${output_objdir}/so_locations -o $lib'
++ hardcode_libdir_flag_spec='${wl}-rpath ${wl}$libdir'
++ else
++ allow_undefined_flag=' -expect_unresolved \*'
++ archive_cmds='$CC -shared${allow_undefined_flag} $libobjs $deplibs $compiler_flags -msym -soname $soname `test -n "$verstring" && $ECHO "X-set_version $verstring" | $Xsed` -update_registry ${output_objdir}/so_locations -o $lib'
++ archive_expsym_cmds='for i in `cat $export_symbols`; do printf "%s %s\\n" -exported_symbol "\$i" >> $lib.exp; done; printf "%s\\n" "-hidden">> $lib.exp~
++ $CC -shared${allow_undefined_flag} ${wl}-input ${wl}$lib.exp $compiler_flags $libobjs $deplibs -soname $soname `test -n "$verstring" && $ECHO "X-set_version $verstring" | $Xsed` -update_registry ${output_objdir}/so_locations -o $lib~$RM $lib.exp'
++
++ # Both c and cxx compiler support -rpath directly
++ hardcode_libdir_flag_spec='-rpath $libdir'
++ fi
++ archive_cmds_need_lc='no'
++ hardcode_libdir_separator=:
++ ;;
++
++ solaris*)
++ no_undefined_flag=' -z defs'
++ if test "$GCC" = yes; then
++ wlarc='${wl}'
++ archive_cmds='$CC -shared ${wl}-z ${wl}text ${wl}-h ${wl}$soname -o $lib $libobjs $deplibs $compiler_flags'
++ archive_expsym_cmds='echo "{ global:" > $lib.exp~cat $export_symbols | $SED -e "s/\(.*\)/\1;/" >> $lib.exp~echo "local: *; };" >> $lib.exp~
++ $CC -shared ${wl}-z ${wl}text ${wl}-M ${wl}$lib.exp ${wl}-h ${wl}$soname -o $lib $libobjs $deplibs $compiler_flags~$RM $lib.exp'
++ else
++ case `$CC -V 2>&1` in
++ *"Compilers 5.0"*)
++ wlarc=''
++ archive_cmds='$LD -G${allow_undefined_flag} -h $soname -o $lib $libobjs $deplibs $linker_flags'
++ archive_expsym_cmds='echo "{ global:" > $lib.exp~cat $export_symbols | $SED -e "s/\(.*\)/\1;/" >> $lib.exp~echo "local: *; };" >> $lib.exp~
++ $LD -G${allow_undefined_flag} -M $lib.exp -h $soname -o $lib $libobjs $deplibs $linker_flags~$RM $lib.exp'
++ ;;
++ *)
++ wlarc='${wl}'
++ archive_cmds='$CC -G${allow_undefined_flag} -h $soname -o $lib $libobjs $deplibs $compiler_flags'
++ archive_expsym_cmds='echo "{ global:" > $lib.exp~cat $export_symbols | $SED -e "s/\(.*\)/\1;/" >> $lib.exp~echo "local: *; };" >> $lib.exp~
++ $CC -G${allow_undefined_flag} -M $lib.exp -h $soname -o $lib $libobjs $deplibs $compiler_flags~$RM $lib.exp'
++ ;;
++ esac
++ fi
++ hardcode_libdir_flag_spec='-R$libdir'
++ hardcode_shlibpath_var=no
++ case $host_os in
++ solaris2.[0-5] | solaris2.[0-5].*) ;;
++ *)
++ # The compiler driver will combine and reorder linker options,
++ # but understands `-z linker_flag'. GCC discards it without `$wl',
++ # but is careful enough not to reorder.
++ # Supported since Solaris 2.6 (maybe 2.5.1?)
++ if test "$GCC" = yes; then
++ whole_archive_flag_spec='${wl}-z ${wl}allextract$convenience ${wl}-z ${wl}defaultextract'
++ else
++ whole_archive_flag_spec='-z allextract$convenience -z defaultextract'
++ fi
++ ;;
++ esac
++ link_all_deplibs=yes
++ ;;
++
++ sunos4*)
++ if test "x$host_vendor" = xsequent; then
++ # Use $CC to link under sequent, because it throws in some extra .o
++ # files that make .init and .fini sections work.
++ archive_cmds='$CC -G ${wl}-h $soname -o $lib $libobjs $deplibs $compiler_flags'
++ else
++ archive_cmds='$LD -assert pure-text -Bstatic -o $lib $libobjs $deplibs $linker_flags'
++ fi
++ hardcode_libdir_flag_spec='-L$libdir'
++ hardcode_direct=yes
++ hardcode_minus_L=yes
++ hardcode_shlibpath_var=no
++ ;;
++
++ sysv4)
++ case $host_vendor in
++ sni)
++ archive_cmds='$LD -G -h $soname -o $lib $libobjs $deplibs $linker_flags'
++ hardcode_direct=yes # is this really true???
++ ;;
++ siemens)
++ ## LD is ld it makes a PLAMLIB
++ ## CC just makes a GrossModule.
++ archive_cmds='$LD -G -o $lib $libobjs $deplibs $linker_flags'
++ reload_cmds='$CC -r -o $output$reload_objs'
++ hardcode_direct=no
++ ;;
++ motorola)
++ archive_cmds='$LD -G -h $soname -o $lib $libobjs $deplibs $linker_flags'
++ hardcode_direct=no #Motorola manual says yes, but my tests say they lie
++ ;;
++ esac
++ runpath_var='LD_RUN_PATH'
++ hardcode_shlibpath_var=no
++ ;;
++
++ sysv4.3*)
++ archive_cmds='$LD -G -h $soname -o $lib $libobjs $deplibs $linker_flags'
++ hardcode_shlibpath_var=no
++ export_dynamic_flag_spec='-Bexport'
++ ;;
++
++ sysv4*MP*)
++ if test -d /usr/nec; then
++ archive_cmds='$LD -G -h $soname -o $lib $libobjs $deplibs $linker_flags'
++ hardcode_shlibpath_var=no
++ runpath_var=LD_RUN_PATH
++ hardcode_runpath_var=yes
++ ld_shlibs=yes
++ fi
++ ;;
++
++ sysv4*uw2* | sysv5OpenUNIX* | sysv5UnixWare7.[01].[10]* | unixware7* | sco3.2v5.0.[024]*)
++ no_undefined_flag='${wl}-z,text'
++ archive_cmds_need_lc=no
++ hardcode_shlibpath_var=no
++ runpath_var='LD_RUN_PATH'
++
++ if test "$GCC" = yes; then
++ archive_cmds='$CC -shared ${wl}-h,$soname -o $lib $libobjs $deplibs $compiler_flags'
++ archive_expsym_cmds='$CC -shared ${wl}-Bexport:$export_symbols ${wl}-h,$soname -o $lib $libobjs $deplibs $compiler_flags'
++ else
++ archive_cmds='$CC -G ${wl}-h,$soname -o $lib $libobjs $deplibs $compiler_flags'
++ archive_expsym_cmds='$CC -G ${wl}-Bexport:$export_symbols ${wl}-h,$soname -o $lib $libobjs $deplibs $compiler_flags'
++ fi
++ ;;
++
++ sysv5* | sco3.2v5* | sco5v6*)
++ # Note: We can NOT use -z defs as we might desire, because we do not
++ # link with -lc, and that would cause any symbols used from libc to
++ # always be unresolved, which means just about no library would
++ # ever link correctly. If we're not using GNU ld we use -z text
++ # though, which does catch some bad symbols but isn't as heavy-handed
++ # as -z defs.
++ no_undefined_flag='${wl}-z,text'
++ allow_undefined_flag='${wl}-z,nodefs'
++ archive_cmds_need_lc=no
++ hardcode_shlibpath_var=no
++ hardcode_libdir_flag_spec='${wl}-R,$libdir'
++ hardcode_libdir_separator=':'
++ link_all_deplibs=yes
++ export_dynamic_flag_spec='${wl}-Bexport'
++ runpath_var='LD_RUN_PATH'
++
++ if test "$GCC" = yes; then
++ archive_cmds='$CC -shared ${wl}-h,$soname -o $lib $libobjs $deplibs $compiler_flags'
++ archive_expsym_cmds='$CC -shared ${wl}-Bexport:$export_symbols ${wl}-h,$soname -o $lib $libobjs $deplibs $compiler_flags'
++ else
++ archive_cmds='$CC -G ${wl}-h,$soname -o $lib $libobjs $deplibs $compiler_flags'
++ archive_expsym_cmds='$CC -G ${wl}-Bexport:$export_symbols ${wl}-h,$soname -o $lib $libobjs $deplibs $compiler_flags'
++ fi
++ ;;
++
++ uts4*)
++ archive_cmds='$LD -G -h $soname -o $lib $libobjs $deplibs $linker_flags'
++ hardcode_libdir_flag_spec='-L$libdir'
++ hardcode_shlibpath_var=no
++ ;;
++
++ *)
++ ld_shlibs=no
++ ;;
++ esac
++
++ if test x$host_vendor = xsni; then
++ case $host in
++ sysv4 | sysv4.2uw2* | sysv4.3* | sysv5*)
++ export_dynamic_flag_spec='${wl}-Blargedynsym'
++ ;;
++ esac
++ fi
++ fi
++
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ld_shlibs" >&5
++$as_echo "$ld_shlibs" >&6; }
++test "$ld_shlibs" = no && can_build_shared=no
++
++with_gnu_ld=$with_gnu_ld
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++#
++# Do we need to explicitly link libc?
++#
++case "x$archive_cmds_need_lc" in
++x|xyes)
++ # Assume -lc should be added
++ archive_cmds_need_lc=yes
++
++ if test "$enable_shared" = yes && test "$GCC" = yes; then
++ case $archive_cmds in
++ *'~'*)
++ # FIXME: we may have to deal with multi-command sequences.
++ ;;
++ '$CC '*)
++ # Test whether the compiler implicitly links with -lc since on some
++ # systems, -lgcc has to come before -lc. If gcc already passes -lc
++ # to ld, don't add -lc before -lgcc.
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking whether -lc should be explicitly linked in" >&5
++$as_echo_n "checking whether -lc should be explicitly linked in... " >&6; }
++ $RM conftest*
++ echo "$lt_simple_compile_test_code" > conftest.$ac_ext
++
++ if { { eval echo "\"\$as_me\":${as_lineno-$LINENO}: \"$ac_compile\""; } >&5
++ (eval $ac_compile) 2>&5
++ ac_status=$?
++ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
++ test $ac_status = 0; } 2>conftest.err; then
++ soname=conftest
++ lib=conftest
++ libobjs=conftest.$ac_objext
++ deplibs=
++ wl=$lt_prog_compiler_wl
++ pic_flag=$lt_prog_compiler_pic
++ compiler_flags=-v
++ linker_flags=-v
++ verstring=
++ output_objdir=.
++ libname=conftest
++ lt_save_allow_undefined_flag=$allow_undefined_flag
++ allow_undefined_flag=
++ if { { eval echo "\"\$as_me\":${as_lineno-$LINENO}: \"$archive_cmds 2\>\&1 \| $GREP \" -lc \" \>/dev/null 2\>\&1\""; } >&5
++ (eval $archive_cmds 2\>\&1 \| $GREP \" -lc \" \>/dev/null 2\>\&1) 2>&5
++ ac_status=$?
++ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
++ test $ac_status = 0; }
++ then
++ archive_cmds_need_lc=no
++ else
++ archive_cmds_need_lc=yes
++ fi
++ allow_undefined_flag=$lt_save_allow_undefined_flag
++ else
++ cat conftest.err 1>&5
++ fi
++ $RM conftest*
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $archive_cmds_need_lc" >&5
++$as_echo "$archive_cmds_need_lc" >&6; }
++ ;;
++ esac
++ fi
++ ;;
++esac
++
++
++
++
++
++
++
++
++
++
++
++
++
++
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++
++
++
++
++
++
++
++
++
++
++
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking dynamic linker characteristics" >&5
++$as_echo_n "checking dynamic linker characteristics... " >&6; }
++
++if test "$GCC" = yes; then
++ case $host_os in
++ darwin*) lt_awk_arg="/^libraries:/,/LR/" ;;
++ *) lt_awk_arg="/^libraries:/" ;;
++ esac
++ lt_search_path_spec=`$CC -print-search-dirs | awk $lt_awk_arg | $SED -e "s/^libraries://" -e "s,=/,/,g"`
++ if $ECHO "$lt_search_path_spec" | $GREP ';' >/dev/null ; then
++ # if the path contains ";" then we assume it to be the separator
++ # otherwise default to the standard path separator (i.e. ":") - it is
++ # assumed that no part of a normal pathname contains ";" but that should
++ # okay in the real world where ";" in dirpaths is itself problematic.
++ lt_search_path_spec=`$ECHO "$lt_search_path_spec" | $SED -e 's/;/ /g'`
++ else
++ lt_search_path_spec=`$ECHO "$lt_search_path_spec" | $SED -e "s/$PATH_SEPARATOR/ /g"`
++ fi
++ # Ok, now we have the path, separated by spaces, we can step through it
++ # and add multilib dir if necessary.
++ lt_tmp_lt_search_path_spec=
++ lt_multi_os_dir=`$CC $CPPFLAGS $CFLAGS $LDFLAGS -print-multi-os-directory 2>/dev/null`
++ for lt_sys_path in $lt_search_path_spec; do
++ if test -d "$lt_sys_path/$lt_multi_os_dir"; then
++ lt_tmp_lt_search_path_spec="$lt_tmp_lt_search_path_spec $lt_sys_path/$lt_multi_os_dir"
++ else
++ test -d "$lt_sys_path" && \
++ lt_tmp_lt_search_path_spec="$lt_tmp_lt_search_path_spec $lt_sys_path"
++ fi
++ done
++ lt_search_path_spec=`$ECHO $lt_tmp_lt_search_path_spec | awk '
++BEGIN {RS=" "; FS="/|\n";} {
++ lt_foo="";
++ lt_count=0;
++ for (lt_i = NF; lt_i > 0; lt_i--) {
++ if ($lt_i != "" && $lt_i != ".") {
++ if ($lt_i == "..") {
++ lt_count++;
++ } else {
++ if (lt_count == 0) {
++ lt_foo="/" $lt_i lt_foo;
++ } else {
++ lt_count--;
++ }
++ }
++ }
++ }
++ if (lt_foo != "") { lt_freq[lt_foo]++; }
++ if (lt_freq[lt_foo] == 1) { print lt_foo; }
++}'`
++ sys_lib_search_path_spec=`$ECHO $lt_search_path_spec`
++else
++ sys_lib_search_path_spec="/lib /usr/lib /usr/local/lib"
++fi
++library_names_spec=
++libname_spec='lib$name'
++soname_spec=
++shrext_cmds=".so"
++postinstall_cmds=
++postuninstall_cmds=
++finish_cmds=
++finish_eval=
++shlibpath_var=
++shlibpath_overrides_runpath=unknown
++version_type=none
++dynamic_linker="$host_os ld.so"
++sys_lib_dlsearch_path_spec="/lib /usr/lib"
++need_lib_prefix=unknown
++hardcode_into_libs=no
++
++# when you set need_version to no, make sure it does not cause -set_version
++# flags to be left without arguments
++need_version=unknown
++
++case $host_os in
++aix3*)
++ version_type=linux
++ library_names_spec='${libname}${release}${shared_ext}$versuffix $libname.a'
++ shlibpath_var=LIBPATH
++
++ # AIX 3 has no versioning support, so we append a major version to the name.
++ soname_spec='${libname}${release}${shared_ext}$major'
++ ;;
++
++aix[4-9]*)
++ version_type=linux
++ need_lib_prefix=no
++ need_version=no
++ hardcode_into_libs=yes
++ if test "$host_cpu" = ia64; then
++ # AIX 5 supports IA64
++ library_names_spec='${libname}${release}${shared_ext}$major ${libname}${release}${shared_ext}$versuffix $libname${shared_ext}'
++ shlibpath_var=LD_LIBRARY_PATH
++ else
++ # With GCC up to 2.95.x, collect2 would create an import file
++ # for dependence libraries. The import file would start with
++ # the line `#! .'. This would cause the generated library to
++ # depend on `.', always an invalid library. This was fixed in
++ # development snapshots of GCC prior to 3.0.
++ case $host_os in
++ aix4 | aix4.[01] | aix4.[01].*)
++ if { echo '#if __GNUC__ > 2 || (__GNUC__ == 2 && __GNUC_MINOR__ >= 97)'
++ echo ' yes '
++ echo '#endif'; } | ${CC} -E - | $GREP yes > /dev/null; then
++ :
++ else
++ can_build_shared=no
++ fi
++ ;;
++ esac
++ # AIX (on Power*) has no versioning support, so currently we can not hardcode correct
++ # soname into executable. Probably we can add versioning support to
++ # collect2, so additional links can be useful in future.
++ if test "$aix_use_runtimelinking" = yes; then
++ # If using run time linking (on AIX 4.2 or later) use lib<name>.so
++ # instead of lib<name>.a to let people know that these are not
++ # typical AIX shared libraries.
++ library_names_spec='${libname}${release}${shared_ext}$versuffix ${libname}${release}${shared_ext}$major $libname${shared_ext}'
++ else
++ # We preserve .a as extension for shared libraries through AIX4.2
++ # and later when we are not doing run time linking.
++ library_names_spec='${libname}${release}.a $libname.a'
++ soname_spec='${libname}${release}${shared_ext}$major'
++ fi
++ shlibpath_var=LIBPATH
++ fi
++ ;;
++
++amigaos*)
++ case $host_cpu in
++ powerpc)
++ # Since July 2007 AmigaOS4 officially supports .so libraries.
++ # When compiling the executable, add -use-dynld -Lsobjs: to the compileline.
++ library_names_spec='${libname}${release}${shared_ext}$versuffix ${libname}${release}${shared_ext}$major $libname${shared_ext}'
++ ;;
++ m68k)
++ library_names_spec='$libname.ixlibrary $libname.a'
++ # Create ${libname}_ixlibrary.a entries in /sys/libs.
++ finish_eval='for lib in `ls $libdir/*.ixlibrary 2>/dev/null`; do libname=`$ECHO "X$lib" | $Xsed -e '\''s%^.*/\([^/]*\)\.ixlibrary$%\1%'\''`; test $RM /sys/libs/${libname}_ixlibrary.a; $show "cd /sys/libs && $LN_S $lib ${libname}_ixlibrary.a"; cd /sys/libs && $LN_S $lib ${libname}_ixlibrary.a || exit 1; done'
++ ;;
++ esac
++ ;;
++
++beos*)
++ library_names_spec='${libname}${shared_ext}'
++ dynamic_linker="$host_os ld.so"
++ shlibpath_var=LIBRARY_PATH
++ ;;
++
++bsdi[45]*)
++ version_type=linux
++ need_version=no
++ library_names_spec='${libname}${release}${shared_ext}$versuffix ${libname}${release}${shared_ext}$major $libname${shared_ext}'
++ soname_spec='${libname}${release}${shared_ext}$major'
++ finish_cmds='PATH="\$PATH:/sbin" ldconfig $libdir'
++ shlibpath_var=LD_LIBRARY_PATH
++ sys_lib_search_path_spec="/shlib /usr/lib /usr/X11/lib /usr/contrib/lib /lib /usr/local/lib"
++ sys_lib_dlsearch_path_spec="/shlib /usr/lib /usr/local/lib"
++ # the default ld.so.conf also contains /usr/contrib/lib and
++ # /usr/X11R6/lib (/usr/X11 is a link to /usr/X11R6), but let us allow
++ # libtool to hard-code these into programs
++ ;;
++
++cygwin* | mingw* | pw32* | cegcc*)
++ version_type=windows
++ shrext_cmds=".dll"
++ need_version=no
++ need_lib_prefix=no
++
++ case $GCC,$host_os in
++ yes,cygwin* | yes,mingw* | yes,pw32* | yes,cegcc*)
++ library_names_spec='$libname.dll.a'
++ # DLL is installed to $(libdir)/../bin by postinstall_cmds
++ postinstall_cmds='base_file=`basename \${file}`~
++ dlpath=`$SHELL 2>&1 -c '\''. $dir/'\''\${base_file}'\''i; echo \$dlname'\''`~
++ dldir=$destdir/`dirname \$dlpath`~
++ test -d \$dldir || mkdir -p \$dldir~
++ $install_prog $dir/$dlname \$dldir/$dlname~
++ chmod a+x \$dldir/$dlname~
++ if test -n '\''$stripme'\'' && test -n '\''$striplib'\''; then
++ eval '\''$striplib \$dldir/$dlname'\'' || exit \$?;
++ fi'
++ postuninstall_cmds='dldll=`$SHELL 2>&1 -c '\''. $file; echo \$dlname'\''`~
++ dlpath=$dir/\$dldll~
++ $RM \$dlpath'
++ shlibpath_overrides_runpath=yes
++
++ case $host_os in
++ cygwin*)
++ # Cygwin DLLs use 'cyg' prefix rather than 'lib'
++ soname_spec='`echo ${libname} | sed -e 's/^lib/cyg/'``echo ${release} | $SED -e 's/[.]/-/g'`${versuffix}${shared_ext}'
++ sys_lib_search_path_spec="/usr/lib /lib/w32api /lib /usr/local/lib"
++ ;;
++ mingw* | cegcc*)
++ # MinGW DLLs use traditional 'lib' prefix
++ soname_spec='${libname}`echo ${release} | $SED -e 's/[.]/-/g'`${versuffix}${shared_ext}'
++ sys_lib_search_path_spec=`$CC -print-search-dirs | $GREP "^libraries:" | $SED -e "s/^libraries://" -e "s,=/,/,g"`
++ if $ECHO "$sys_lib_search_path_spec" | $GREP ';[c-zC-Z]:/' >/dev/null; then
++ # It is most probably a Windows format PATH printed by
++ # mingw gcc, but we are running on Cygwin. Gcc prints its search
++ # path with ; separators, and with drive letters. We can handle the
++ # drive letters (cygwin fileutils understands them), so leave them,
++ # especially as we might pass files found there to a mingw objdump,
++ # which wouldn't understand a cygwinified path. Ahh.
++ sys_lib_search_path_spec=`$ECHO "$sys_lib_search_path_spec" | $SED -e 's/;/ /g'`
++ else
++ sys_lib_search_path_spec=`$ECHO "$sys_lib_search_path_spec" | $SED -e "s/$PATH_SEPARATOR/ /g"`
++ fi
++ ;;
++ pw32*)
++ # pw32 DLLs use 'pw' prefix rather than 'lib'
++ library_names_spec='`echo ${libname} | sed -e 's/^lib/pw/'``echo ${release} | $SED -e 's/[.]/-/g'`${versuffix}${shared_ext}'
++ ;;
++ esac
++ ;;
++
++ *)
++ library_names_spec='${libname}`echo ${release} | $SED -e 's/[.]/-/g'`${versuffix}${shared_ext} $libname.lib'
++ ;;
++ esac
++ dynamic_linker='Win32 ld.exe'
++ # FIXME: first we should search . and the directory the executable is in
++ shlibpath_var=PATH
++ ;;
++
++darwin* | rhapsody*)
++ dynamic_linker="$host_os dyld"
++ version_type=darwin
++ need_lib_prefix=no
++ need_version=no
++ library_names_spec='${libname}${release}${major}$shared_ext ${libname}$shared_ext'
++ soname_spec='${libname}${release}${major}$shared_ext'
++ shlibpath_overrides_runpath=yes
++ shlibpath_var=DYLD_LIBRARY_PATH
++ shrext_cmds='`test .$module = .yes && echo .so || echo .dylib`'
++
++ sys_lib_search_path_spec="$sys_lib_search_path_spec /usr/local/lib"
++ sys_lib_dlsearch_path_spec='/usr/local/lib /lib /usr/lib'
++ ;;
++
++dgux*)
++ version_type=linux
++ need_lib_prefix=no
++ need_version=no
++ library_names_spec='${libname}${release}${shared_ext}$versuffix ${libname}${release}${shared_ext}$major $libname$shared_ext'
++ soname_spec='${libname}${release}${shared_ext}$major'
++ shlibpath_var=LD_LIBRARY_PATH
++ ;;
++
++freebsd1*)
++ dynamic_linker=no
++ ;;
++
++freebsd* | dragonfly*)
++ # DragonFly does not have aout. When/if they implement a new
++ # versioning mechanism, adjust this.
++ if test -x /usr/bin/objformat; then
++ objformat=`/usr/bin/objformat`
++ else
++ case $host_os in
++ freebsd[123]*) objformat=aout ;;
++ *) objformat=elf ;;
++ esac
++ fi
++ version_type=freebsd-$objformat
++ case $version_type in
++ freebsd-elf*)
++ library_names_spec='${libname}${release}${shared_ext}$versuffix ${libname}${release}${shared_ext} $libname${shared_ext}'
++ need_version=no
++ need_lib_prefix=no
++ ;;
++ freebsd-*)
++ library_names_spec='${libname}${release}${shared_ext}$versuffix $libname${shared_ext}$versuffix'
++ need_version=yes
++ ;;
++ esac
++ shlibpath_var=LD_LIBRARY_PATH
++ case $host_os in
++ freebsd2*)
++ shlibpath_overrides_runpath=yes
++ ;;
++ freebsd3.[01]* | freebsdelf3.[01]*)
++ shlibpath_overrides_runpath=yes
++ hardcode_into_libs=yes
++ ;;
++ freebsd3.[2-9]* | freebsdelf3.[2-9]* | \
++ freebsd4.[0-5] | freebsdelf4.[0-5] | freebsd4.1.1 | freebsdelf4.1.1)
++ shlibpath_overrides_runpath=no
++ hardcode_into_libs=yes
++ ;;
++ *) # from 4.6 on, and DragonFly
++ shlibpath_overrides_runpath=yes
++ hardcode_into_libs=yes
++ ;;
++ esac
++ ;;
++
++gnu*)
++ version_type=linux
++ need_lib_prefix=no
++ need_version=no
++ library_names_spec='${libname}${release}${shared_ext}$versuffix ${libname}${release}${shared_ext}${major} ${libname}${shared_ext}'
++ soname_spec='${libname}${release}${shared_ext}$major'
++ shlibpath_var=LD_LIBRARY_PATH
++ hardcode_into_libs=yes
++ ;;
++
++hpux9* | hpux10* | hpux11*)
++ # Give a soname corresponding to the major version so that dld.sl refuses to
++ # link against other versions.
++ version_type=sunos
++ need_lib_prefix=no
++ need_version=no
++ case $host_cpu in
++ ia64*)
++ shrext_cmds='.so'
++ hardcode_into_libs=yes
++ dynamic_linker="$host_os dld.so"
++ shlibpath_var=LD_LIBRARY_PATH
++ shlibpath_overrides_runpath=yes # Unless +noenvvar is specified.
++ library_names_spec='${libname}${release}${shared_ext}$versuffix ${libname}${release}${shared_ext}$major $libname${shared_ext}'
++ soname_spec='${libname}${release}${shared_ext}$major'
++ if test "X$HPUX_IA64_MODE" = X32; then
++ sys_lib_search_path_spec="/usr/lib/hpux32 /usr/local/lib/hpux32 /usr/local/lib"
++ else
++ sys_lib_search_path_spec="/usr/lib/hpux64 /usr/local/lib/hpux64"
++ fi
++ sys_lib_dlsearch_path_spec=$sys_lib_search_path_spec
++ ;;
++ hppa*64*)
++ shrext_cmds='.sl'
++ hardcode_into_libs=yes
++ dynamic_linker="$host_os dld.sl"
++ shlibpath_var=LD_LIBRARY_PATH # How should we handle SHLIB_PATH
++ shlibpath_overrides_runpath=yes # Unless +noenvvar is specified.
++ library_names_spec='${libname}${release}${shared_ext}$versuffix ${libname}${release}${shared_ext}$major $libname${shared_ext}'
++ soname_spec='${libname}${release}${shared_ext}$major'
++ sys_lib_search_path_spec="/usr/lib/pa20_64 /usr/ccs/lib/pa20_64"
++ sys_lib_dlsearch_path_spec=$sys_lib_search_path_spec
++ ;;
++ *)
++ shrext_cmds='.sl'
++ dynamic_linker="$host_os dld.sl"
++ shlibpath_var=SHLIB_PATH
++ shlibpath_overrides_runpath=no # +s is required to enable SHLIB_PATH
++ library_names_spec='${libname}${release}${shared_ext}$versuffix ${libname}${release}${shared_ext}$major $libname${shared_ext}'
++ soname_spec='${libname}${release}${shared_ext}$major'
++ ;;
++ esac
++ # HP-UX runs *really* slowly unless shared libraries are mode 555.
++ postinstall_cmds='chmod 555 $lib'
++ ;;
++
++interix[3-9]*)
++ version_type=linux
++ need_lib_prefix=no
++ need_version=no
++ library_names_spec='${libname}${release}${shared_ext}$versuffix ${libname}${release}${shared_ext}$major ${libname}${shared_ext}'
++ soname_spec='${libname}${release}${shared_ext}$major'
++ dynamic_linker='Interix 3.x ld.so.1 (PE, like ELF)'
++ shlibpath_var=LD_LIBRARY_PATH
++ shlibpath_overrides_runpath=no
++ hardcode_into_libs=yes
++ ;;
++
++irix5* | irix6* | nonstopux*)
++ case $host_os in
++ nonstopux*) version_type=nonstopux ;;
++ *)
++ if test "$lt_cv_prog_gnu_ld" = yes; then
++ version_type=linux
++ else
++ version_type=irix
++ fi ;;
++ esac
++ need_lib_prefix=no
++ need_version=no
++ soname_spec='${libname}${release}${shared_ext}$major'
++ library_names_spec='${libname}${release}${shared_ext}$versuffix ${libname}${release}${shared_ext}$major ${libname}${release}${shared_ext} $libname${shared_ext}'
++ case $host_os in
++ irix5* | nonstopux*)
++ libsuff= shlibsuff=
++ ;;
++ *)
++ case $LD in # libtool.m4 will add one of these switches to LD
++ *-32|*"-32 "|*-melf32bsmip|*"-melf32bsmip ")
++ libsuff= shlibsuff= libmagic=32-bit;;
++ *-n32|*"-n32 "|*-melf32bmipn32|*"-melf32bmipn32 ")
++ libsuff=32 shlibsuff=N32 libmagic=N32;;
++ *-64|*"-64 "|*-melf64bmip|*"-melf64bmip ")
++ libsuff=64 shlibsuff=64 libmagic=64-bit;;
++ *) libsuff= shlibsuff= libmagic=never-match;;
++ esac
++ ;;
++ esac
++ shlibpath_var=LD_LIBRARY${shlibsuff}_PATH
++ shlibpath_overrides_runpath=no
++ sys_lib_search_path_spec="/usr/lib${libsuff} /lib${libsuff} /usr/local/lib${libsuff}"
++ sys_lib_dlsearch_path_spec="/usr/lib${libsuff} /lib${libsuff}"
++ hardcode_into_libs=yes
++ ;;
++
++# No shared lib support for Linux oldld, aout, or coff.
++linux*oldld* | linux*aout* | linux*coff*)
++ dynamic_linker=no
++ ;;
++
++# This must be Linux ELF.
++linux* | k*bsd*-gnu)
++ version_type=linux
++ need_lib_prefix=no
++ need_version=no
++ library_names_spec='${libname}${release}${shared_ext}$versuffix ${libname}${release}${shared_ext}$major $libname${shared_ext}'
++ soname_spec='${libname}${release}${shared_ext}$major'
++ finish_cmds='PATH="\$PATH:/sbin" ldconfig -n $libdir'
++ shlibpath_var=LD_LIBRARY_PATH
++ shlibpath_overrides_runpath=no
++ # Some binutils ld are patched to set DT_RUNPATH
++ save_LDFLAGS=$LDFLAGS
++ save_libdir=$libdir
++ eval "libdir=/foo; wl=\"$lt_prog_compiler_wl\"; \
++ LDFLAGS=\"\$LDFLAGS $hardcode_libdir_flag_spec\""
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++int
++main ()
++{
++
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_link "$LINENO"; then :
++ if ($OBJDUMP -p conftest$ac_exeext) 2>/dev/null | grep "RUNPATH.*$libdir" >/dev/null; then :
++ shlibpath_overrides_runpath=yes
++fi
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext conftest.$ac_ext
++ LDFLAGS=$save_LDFLAGS
++ libdir=$save_libdir
++
++ # This implies no fast_install, which is unacceptable.
++ # Some rework will be needed to allow for fast_install
++ # before this can be enabled.
++ hardcode_into_libs=yes
++
++ # Add ABI-specific directories to the system library path.
++ sys_lib_dlsearch_path_spec="/lib64 /usr/lib64 /lib /usr/lib"
++
++ # Append ld.so.conf contents to the search path
++ if test -f /etc/ld.so.conf; then
++ lt_ld_extra=`awk '/^include / { system(sprintf("cd /etc; cat %s 2>/dev/null", \$2)); skip = 1; } { if (!skip) print \$0; skip = 0; }' < /etc/ld.so.conf | $SED -e 's/#.*//;/^[ ]*hwcap[ ]/d;s/[:, ]/ /g;s/=[^=]*$//;s/=[^= ]* / /g;/^$/d' | tr '\n' ' '`
++ sys_lib_dlsearch_path_spec="$sys_lib_dlsearch_path_spec $lt_ld_extra"
++ fi
++
++ # We used to test for /lib/ld.so.1 and disable shared libraries on
++ # powerpc, because MkLinux only supported shared libraries with the
++ # GNU dynamic linker. Since this was broken with cross compilers,
++ # most powerpc-linux boxes support dynamic linking these days and
++ # people can always --disable-shared, the test was removed, and we
++ # assume the GNU/Linux dynamic linker is in use.
++ dynamic_linker='GNU/Linux ld.so'
++ ;;
++
++netbsd*)
++ version_type=sunos
++ need_lib_prefix=no
++ need_version=no
++ if echo __ELF__ | $CC -E - | $GREP __ELF__ >/dev/null; then
++ library_names_spec='${libname}${release}${shared_ext}$versuffix ${libname}${shared_ext}$versuffix'
++ finish_cmds='PATH="\$PATH:/sbin" ldconfig -m $libdir'
++ dynamic_linker='NetBSD (a.out) ld.so'
++ else
++ library_names_spec='${libname}${release}${shared_ext}$versuffix ${libname}${release}${shared_ext}$major ${libname}${shared_ext}'
++ soname_spec='${libname}${release}${shared_ext}$major'
++ dynamic_linker='NetBSD ld.elf_so'
++ fi
++ shlibpath_var=LD_LIBRARY_PATH
++ shlibpath_overrides_runpath=yes
++ hardcode_into_libs=yes
++ ;;
++
++newsos6)
++ version_type=linux
++ library_names_spec='${libname}${release}${shared_ext}$versuffix ${libname}${release}${shared_ext}$major $libname${shared_ext}'
++ shlibpath_var=LD_LIBRARY_PATH
++ shlibpath_overrides_runpath=yes
++ ;;
++
++*nto* | *qnx*)
++ version_type=qnx
++ need_lib_prefix=no
++ need_version=no
++ library_names_spec='${libname}${release}${shared_ext}$versuffix ${libname}${release}${shared_ext}$major $libname${shared_ext}'
++ soname_spec='${libname}${release}${shared_ext}$major'
++ shlibpath_var=LD_LIBRARY_PATH
++ shlibpath_overrides_runpath=no
++ hardcode_into_libs=yes
++ dynamic_linker='ldqnx.so'
++ ;;
++
++openbsd*)
++ version_type=sunos
++ sys_lib_dlsearch_path_spec="/usr/lib"
++ need_lib_prefix=no
++ # Some older versions of OpenBSD (3.3 at least) *do* need versioned libs.
++ case $host_os in
++ openbsd3.3 | openbsd3.3.*) need_version=yes ;;
++ *) need_version=no ;;
++ esac
++ library_names_spec='${libname}${release}${shared_ext}$versuffix ${libname}${shared_ext}$versuffix'
++ finish_cmds='PATH="\$PATH:/sbin" ldconfig -m $libdir'
++ shlibpath_var=LD_LIBRARY_PATH
++ if test -z "`echo __ELF__ | $CC -E - | $GREP __ELF__`" || test "$host_os-$host_cpu" = "openbsd2.8-powerpc"; then
++ case $host_os in
++ openbsd2.[89] | openbsd2.[89].*)
++ shlibpath_overrides_runpath=no
++ ;;
++ *)
++ shlibpath_overrides_runpath=yes
++ ;;
++ esac
++ else
++ shlibpath_overrides_runpath=yes
++ fi
++ ;;
++
++os2*)
++ libname_spec='$name'
++ shrext_cmds=".dll"
++ need_lib_prefix=no
++ library_names_spec='$libname${shared_ext} $libname.a'
++ dynamic_linker='OS/2 ld.exe'
++ shlibpath_var=LIBPATH
++ ;;
++
++osf3* | osf4* | osf5*)
++ version_type=osf
++ need_lib_prefix=no
++ need_version=no
++ soname_spec='${libname}${release}${shared_ext}$major'
++ library_names_spec='${libname}${release}${shared_ext}$versuffix ${libname}${release}${shared_ext}$major $libname${shared_ext}'
++ shlibpath_var=LD_LIBRARY_PATH
++ sys_lib_search_path_spec="/usr/shlib /usr/ccs/lib /usr/lib/cmplrs/cc /usr/lib /usr/local/lib /var/shlib"
++ sys_lib_dlsearch_path_spec="$sys_lib_search_path_spec"
++ ;;
++
++rdos*)
++ dynamic_linker=no
++ ;;
++
++solaris*)
++ version_type=linux
++ need_lib_prefix=no
++ need_version=no
++ library_names_spec='${libname}${release}${shared_ext}$versuffix ${libname}${release}${shared_ext}$major $libname${shared_ext}'
++ soname_spec='${libname}${release}${shared_ext}$major'
++ shlibpath_var=LD_LIBRARY_PATH
++ shlibpath_overrides_runpath=yes
++ hardcode_into_libs=yes
++ # ldd complains unless libraries are executable
++ postinstall_cmds='chmod +x $lib'
++ ;;
++
++sunos4*)
++ version_type=sunos
++ library_names_spec='${libname}${release}${shared_ext}$versuffix ${libname}${shared_ext}$versuffix'
++ finish_cmds='PATH="\$PATH:/usr/etc" ldconfig $libdir'
++ shlibpath_var=LD_LIBRARY_PATH
++ shlibpath_overrides_runpath=yes
++ if test "$with_gnu_ld" = yes; then
++ need_lib_prefix=no
++ fi
++ need_version=yes
++ ;;
++
++sysv4 | sysv4.3*)
++ version_type=linux
++ library_names_spec='${libname}${release}${shared_ext}$versuffix ${libname}${release}${shared_ext}$major $libname${shared_ext}'
++ soname_spec='${libname}${release}${shared_ext}$major'
++ shlibpath_var=LD_LIBRARY_PATH
++ case $host_vendor in
++ sni)
++ shlibpath_overrides_runpath=no
++ need_lib_prefix=no
++ runpath_var=LD_RUN_PATH
++ ;;
++ siemens)
++ need_lib_prefix=no
++ ;;
++ motorola)
++ need_lib_prefix=no
++ need_version=no
++ shlibpath_overrides_runpath=no
++ sys_lib_search_path_spec='/lib /usr/lib /usr/ccs/lib'
++ ;;
++ esac
++ ;;
++
++sysv4*MP*)
++ if test -d /usr/nec ;then
++ version_type=linux
++ library_names_spec='$libname${shared_ext}.$versuffix $libname${shared_ext}.$major $libname${shared_ext}'
++ soname_spec='$libname${shared_ext}.$major'
++ shlibpath_var=LD_LIBRARY_PATH
++ fi
++ ;;
++
++sysv5* | sco3.2v5* | sco5v6* | unixware* | OpenUNIX* | sysv4*uw2*)
++ version_type=freebsd-elf
++ need_lib_prefix=no
++ need_version=no
++ library_names_spec='${libname}${release}${shared_ext}$versuffix ${libname}${release}${shared_ext} $libname${shared_ext}'
++ soname_spec='${libname}${release}${shared_ext}$major'
++ shlibpath_var=LD_LIBRARY_PATH
++ shlibpath_overrides_runpath=yes
++ hardcode_into_libs=yes
++ if test "$with_gnu_ld" = yes; then
++ sys_lib_search_path_spec='/usr/local/lib /usr/gnu/lib /usr/ccs/lib /usr/lib /lib'
++ else
++ sys_lib_search_path_spec='/usr/ccs/lib /usr/lib'
++ case $host_os in
++ sco3.2v5*)
++ sys_lib_search_path_spec="$sys_lib_search_path_spec /lib"
++ ;;
++ esac
++ fi
++ sys_lib_dlsearch_path_spec='/usr/lib'
++ ;;
++
++tpf*)
++ # TPF is a cross-target only. Preferred cross-host = GNU/Linux.
++ version_type=linux
++ need_lib_prefix=no
++ need_version=no
++ library_names_spec='${libname}${release}${shared_ext}$versuffix ${libname}${release}${shared_ext}$major $libname${shared_ext}'
++ shlibpath_var=LD_LIBRARY_PATH
++ shlibpath_overrides_runpath=no
++ hardcode_into_libs=yes
++ ;;
++
++uts4*)
++ version_type=linux
++ library_names_spec='${libname}${release}${shared_ext}$versuffix ${libname}${release}${shared_ext}$major $libname${shared_ext}'
++ soname_spec='${libname}${release}${shared_ext}$major'
++ shlibpath_var=LD_LIBRARY_PATH
++ ;;
++
++*)
++ dynamic_linker=no
++ ;;
++esac
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $dynamic_linker" >&5
++$as_echo "$dynamic_linker" >&6; }
++test "$dynamic_linker" = no && can_build_shared=no
++
++variables_saved_for_relink="PATH $shlibpath_var $runpath_var"
++if test "$GCC" = yes; then
++ variables_saved_for_relink="$variables_saved_for_relink GCC_EXEC_PREFIX COMPILER_PATH LIBRARY_PATH"
++fi
++
++if test "${lt_cv_sys_lib_search_path_spec+set}" = set; then
++ sys_lib_search_path_spec="$lt_cv_sys_lib_search_path_spec"
++fi
++if test "${lt_cv_sys_lib_dlsearch_path_spec+set}" = set; then
++ sys_lib_dlsearch_path_spec="$lt_cv_sys_lib_dlsearch_path_spec"
++fi
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
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++
++
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++
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++
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++
++
++
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++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking how to hardcode library paths into programs" >&5
++$as_echo_n "checking how to hardcode library paths into programs... " >&6; }
++hardcode_action=
++if test -n "$hardcode_libdir_flag_spec" ||
++ test -n "$runpath_var" ||
++ test "X$hardcode_automatic" = "Xyes" ; then
++
++ # We can hardcode non-existent directories.
++ if test "$hardcode_direct" != no &&
++ # If the only mechanism to avoid hardcoding is shlibpath_var, we
++ # have to relink, otherwise we might link with an installed library
++ # when we should be linking with a yet-to-be-installed one
++ ## test "$_LT_TAGVAR(hardcode_shlibpath_var, )" != no &&
++ test "$hardcode_minus_L" != no; then
++ # Linking always hardcodes the temporary library directory.
++ hardcode_action=relink
++ else
++ # We can link without hardcoding, and we can hardcode nonexisting dirs.
++ hardcode_action=immediate
++ fi
++else
++ # We cannot hardcode anything, or else we can only hardcode existing
++ # directories.
++ hardcode_action=unsupported
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $hardcode_action" >&5
++$as_echo "$hardcode_action" >&6; }
++
++if test "$hardcode_action" = relink ||
++ test "$inherit_rpath" = yes; then
++ # Fast installation is not supported
++ enable_fast_install=no
++elif test "$shlibpath_overrides_runpath" = yes ||
++ test "$enable_shared" = no; then
++ # Fast installation is not necessary
++ enable_fast_install=needless
++fi
++
++
++
++
++
++
++ if test "x$enable_dlopen" != xyes; then
++ enable_dlopen=unknown
++ enable_dlopen_self=unknown
++ enable_dlopen_self_static=unknown
++else
++ lt_cv_dlopen=no
++ lt_cv_dlopen_libs=
++
++ case $host_os in
++ beos*)
++ lt_cv_dlopen="load_add_on"
++ lt_cv_dlopen_libs=
++ lt_cv_dlopen_self=yes
++ ;;
++
++ mingw* | pw32* | cegcc*)
++ lt_cv_dlopen="LoadLibrary"
++ lt_cv_dlopen_libs=
++ ;;
++
++ cygwin*)
++ lt_cv_dlopen="dlopen"
++ lt_cv_dlopen_libs=
++ ;;
++
++ darwin*)
++ # if libdl is installed we need to link against it
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for dlopen in -ldl" >&5
++$as_echo_n "checking for dlopen in -ldl... " >&6; }
++if test "${ac_cv_lib_dl_dlopen+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ ac_check_lib_save_LIBS=$LIBS
++LIBS="-ldl $LIBS"
++cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++/* Override any GCC internal prototype to avoid an error.
++ Use char because int might match the return type of a GCC
++ builtin and then its argument prototype would still apply. */
++#ifdef __cplusplus
++extern "C"
++#endif
++char dlopen ();
++int
++main ()
++{
++return dlopen ();
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_link "$LINENO"; then :
++ ac_cv_lib_dl_dlopen=yes
++else
++ ac_cv_lib_dl_dlopen=no
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext conftest.$ac_ext
++LIBS=$ac_check_lib_save_LIBS
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_dl_dlopen" >&5
++$as_echo "$ac_cv_lib_dl_dlopen" >&6; }
++if test "x$ac_cv_lib_dl_dlopen" = x""yes; then :
++ lt_cv_dlopen="dlopen" lt_cv_dlopen_libs="-ldl"
++else
++
++ lt_cv_dlopen="dyld"
++ lt_cv_dlopen_libs=
++ lt_cv_dlopen_self=yes
++
++fi
++
++ ;;
++
++ *)
++ ac_fn_c_check_func "$LINENO" "shl_load" "ac_cv_func_shl_load"
++if test "x$ac_cv_func_shl_load" = x""yes; then :
++ lt_cv_dlopen="shl_load"
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for shl_load in -ldld" >&5
++$as_echo_n "checking for shl_load in -ldld... " >&6; }
++if test "${ac_cv_lib_dld_shl_load+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ ac_check_lib_save_LIBS=$LIBS
++LIBS="-ldld $LIBS"
++cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++/* Override any GCC internal prototype to avoid an error.
++ Use char because int might match the return type of a GCC
++ builtin and then its argument prototype would still apply. */
++#ifdef __cplusplus
++extern "C"
++#endif
++char shl_load ();
++int
++main ()
++{
++return shl_load ();
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_link "$LINENO"; then :
++ ac_cv_lib_dld_shl_load=yes
++else
++ ac_cv_lib_dld_shl_load=no
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext conftest.$ac_ext
++LIBS=$ac_check_lib_save_LIBS
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_dld_shl_load" >&5
++$as_echo "$ac_cv_lib_dld_shl_load" >&6; }
++if test "x$ac_cv_lib_dld_shl_load" = x""yes; then :
++ lt_cv_dlopen="shl_load" lt_cv_dlopen_libs="-ldld"
++else
++ ac_fn_c_check_func "$LINENO" "dlopen" "ac_cv_func_dlopen"
++if test "x$ac_cv_func_dlopen" = x""yes; then :
++ lt_cv_dlopen="dlopen"
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for dlopen in -ldl" >&5
++$as_echo_n "checking for dlopen in -ldl... " >&6; }
++if test "${ac_cv_lib_dl_dlopen+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ ac_check_lib_save_LIBS=$LIBS
++LIBS="-ldl $LIBS"
++cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++/* Override any GCC internal prototype to avoid an error.
++ Use char because int might match the return type of a GCC
++ builtin and then its argument prototype would still apply. */
++#ifdef __cplusplus
++extern "C"
++#endif
++char dlopen ();
++int
++main ()
++{
++return dlopen ();
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_link "$LINENO"; then :
++ ac_cv_lib_dl_dlopen=yes
++else
++ ac_cv_lib_dl_dlopen=no
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext conftest.$ac_ext
++LIBS=$ac_check_lib_save_LIBS
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_dl_dlopen" >&5
++$as_echo "$ac_cv_lib_dl_dlopen" >&6; }
++if test "x$ac_cv_lib_dl_dlopen" = x""yes; then :
++ lt_cv_dlopen="dlopen" lt_cv_dlopen_libs="-ldl"
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for dlopen in -lsvld" >&5
++$as_echo_n "checking for dlopen in -lsvld... " >&6; }
++if test "${ac_cv_lib_svld_dlopen+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ ac_check_lib_save_LIBS=$LIBS
++LIBS="-lsvld $LIBS"
++cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++/* Override any GCC internal prototype to avoid an error.
++ Use char because int might match the return type of a GCC
++ builtin and then its argument prototype would still apply. */
++#ifdef __cplusplus
++extern "C"
++#endif
++char dlopen ();
++int
++main ()
++{
++return dlopen ();
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_link "$LINENO"; then :
++ ac_cv_lib_svld_dlopen=yes
++else
++ ac_cv_lib_svld_dlopen=no
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext conftest.$ac_ext
++LIBS=$ac_check_lib_save_LIBS
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_svld_dlopen" >&5
++$as_echo "$ac_cv_lib_svld_dlopen" >&6; }
++if test "x$ac_cv_lib_svld_dlopen" = x""yes; then :
++ lt_cv_dlopen="dlopen" lt_cv_dlopen_libs="-lsvld"
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for dld_link in -ldld" >&5
++$as_echo_n "checking for dld_link in -ldld... " >&6; }
++if test "${ac_cv_lib_dld_dld_link+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ ac_check_lib_save_LIBS=$LIBS
++LIBS="-ldld $LIBS"
++cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++/* Override any GCC internal prototype to avoid an error.
++ Use char because int might match the return type of a GCC
++ builtin and then its argument prototype would still apply. */
++#ifdef __cplusplus
++extern "C"
++#endif
++char dld_link ();
++int
++main ()
++{
++return dld_link ();
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_link "$LINENO"; then :
++ ac_cv_lib_dld_dld_link=yes
++else
++ ac_cv_lib_dld_dld_link=no
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext conftest.$ac_ext
++LIBS=$ac_check_lib_save_LIBS
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_dld_dld_link" >&5
++$as_echo "$ac_cv_lib_dld_dld_link" >&6; }
++if test "x$ac_cv_lib_dld_dld_link" = x""yes; then :
++ lt_cv_dlopen="dld_link" lt_cv_dlopen_libs="-ldld"
++fi
++
++
++fi
++
++
++fi
++
++
++fi
++
++
++fi
++
++
++fi
++
++ ;;
++ esac
++
++ if test "x$lt_cv_dlopen" != xno; then
++ enable_dlopen=yes
++ else
++ enable_dlopen=no
++ fi
++
++ case $lt_cv_dlopen in
++ dlopen)
++ save_CPPFLAGS="$CPPFLAGS"
++ test "x$ac_cv_header_dlfcn_h" = xyes && CPPFLAGS="$CPPFLAGS -DHAVE_DLFCN_H"
++
++ save_LDFLAGS="$LDFLAGS"
++ wl=$lt_prog_compiler_wl eval LDFLAGS=\"\$LDFLAGS $export_dynamic_flag_spec\"
++
++ save_LIBS="$LIBS"
++ LIBS="$lt_cv_dlopen_libs $LIBS"
++
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking whether a program can dlopen itself" >&5
++$as_echo_n "checking whether a program can dlopen itself... " >&6; }
++if test "${lt_cv_dlopen_self+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test "$cross_compiling" = yes; then :
++ lt_cv_dlopen_self=cross
++else
++ lt_dlunknown=0; lt_dlno_uscore=1; lt_dlneed_uscore=2
++ lt_status=$lt_dlunknown
++ cat > conftest.$ac_ext <<_LT_EOF
++#line __oline__ "configure"
++#include "confdefs.h"
++
++#if HAVE_DLFCN_H
++#include <dlfcn.h>
++#endif
++
++#include <stdio.h>
++
++#ifdef RTLD_GLOBAL
++# define LT_DLGLOBAL RTLD_GLOBAL
++#else
++# ifdef DL_GLOBAL
++# define LT_DLGLOBAL DL_GLOBAL
++# else
++# define LT_DLGLOBAL 0
++# endif
++#endif
++
++/* We may have to define LT_DLLAZY_OR_NOW in the command line if we
++ find out it does not work in some platform. */
++#ifndef LT_DLLAZY_OR_NOW
++# ifdef RTLD_LAZY
++# define LT_DLLAZY_OR_NOW RTLD_LAZY
++# else
++# ifdef DL_LAZY
++# define LT_DLLAZY_OR_NOW DL_LAZY
++# else
++# ifdef RTLD_NOW
++# define LT_DLLAZY_OR_NOW RTLD_NOW
++# else
++# ifdef DL_NOW
++# define LT_DLLAZY_OR_NOW DL_NOW
++# else
++# define LT_DLLAZY_OR_NOW 0
++# endif
++# endif
++# endif
++# endif
++#endif
++
++void fnord() { int i=42;}
++int main ()
++{
++ void *self = dlopen (0, LT_DLGLOBAL|LT_DLLAZY_OR_NOW);
++ int status = $lt_dlunknown;
++
++ if (self)
++ {
++ if (dlsym (self,"fnord")) status = $lt_dlno_uscore;
++ else if (dlsym( self,"_fnord")) status = $lt_dlneed_uscore;
++ /* dlclose (self); */
++ }
++ else
++ puts (dlerror ());
++
++ return status;
++}
++_LT_EOF
++ if { { eval echo "\"\$as_me\":${as_lineno-$LINENO}: \"$ac_link\""; } >&5
++ (eval $ac_link) 2>&5
++ ac_status=$?
++ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
++ test $ac_status = 0; } && test -s conftest${ac_exeext} 2>/dev/null; then
++ (./conftest; exit; ) >&5 2>/dev/null
++ lt_status=$?
++ case x$lt_status in
++ x$lt_dlno_uscore) lt_cv_dlopen_self=yes ;;
++ x$lt_dlneed_uscore) lt_cv_dlopen_self=yes ;;
++ x$lt_dlunknown|x*) lt_cv_dlopen_self=no ;;
++ esac
++ else :
++ # compilation failed
++ lt_cv_dlopen_self=no
++ fi
++fi
++rm -fr conftest*
++
++
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $lt_cv_dlopen_self" >&5
++$as_echo "$lt_cv_dlopen_self" >&6; }
++
++ if test "x$lt_cv_dlopen_self" = xyes; then
++ wl=$lt_prog_compiler_wl eval LDFLAGS=\"\$LDFLAGS $lt_prog_compiler_static\"
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking whether a statically linked program can dlopen itself" >&5
++$as_echo_n "checking whether a statically linked program can dlopen itself... " >&6; }
++if test "${lt_cv_dlopen_self_static+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test "$cross_compiling" = yes; then :
++ lt_cv_dlopen_self_static=cross
++else
++ lt_dlunknown=0; lt_dlno_uscore=1; lt_dlneed_uscore=2
++ lt_status=$lt_dlunknown
++ cat > conftest.$ac_ext <<_LT_EOF
++#line __oline__ "configure"
++#include "confdefs.h"
++
++#if HAVE_DLFCN_H
++#include <dlfcn.h>
++#endif
++
++#include <stdio.h>
++
++#ifdef RTLD_GLOBAL
++# define LT_DLGLOBAL RTLD_GLOBAL
++#else
++# ifdef DL_GLOBAL
++# define LT_DLGLOBAL DL_GLOBAL
++# else
++# define LT_DLGLOBAL 0
++# endif
++#endif
++
++/* We may have to define LT_DLLAZY_OR_NOW in the command line if we
++ find out it does not work in some platform. */
++#ifndef LT_DLLAZY_OR_NOW
++# ifdef RTLD_LAZY
++# define LT_DLLAZY_OR_NOW RTLD_LAZY
++# else
++# ifdef DL_LAZY
++# define LT_DLLAZY_OR_NOW DL_LAZY
++# else
++# ifdef RTLD_NOW
++# define LT_DLLAZY_OR_NOW RTLD_NOW
++# else
++# ifdef DL_NOW
++# define LT_DLLAZY_OR_NOW DL_NOW
++# else
++# define LT_DLLAZY_OR_NOW 0
++# endif
++# endif
++# endif
++# endif
++#endif
++
++void fnord() { int i=42;}
++int main ()
++{
++ void *self = dlopen (0, LT_DLGLOBAL|LT_DLLAZY_OR_NOW);
++ int status = $lt_dlunknown;
++
++ if (self)
++ {
++ if (dlsym (self,"fnord")) status = $lt_dlno_uscore;
++ else if (dlsym( self,"_fnord")) status = $lt_dlneed_uscore;
++ /* dlclose (self); */
++ }
++ else
++ puts (dlerror ());
++
++ return status;
++}
++_LT_EOF
++ if { { eval echo "\"\$as_me\":${as_lineno-$LINENO}: \"$ac_link\""; } >&5
++ (eval $ac_link) 2>&5
++ ac_status=$?
++ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
++ test $ac_status = 0; } && test -s conftest${ac_exeext} 2>/dev/null; then
++ (./conftest; exit; ) >&5 2>/dev/null
++ lt_status=$?
++ case x$lt_status in
++ x$lt_dlno_uscore) lt_cv_dlopen_self_static=yes ;;
++ x$lt_dlneed_uscore) lt_cv_dlopen_self_static=yes ;;
++ x$lt_dlunknown|x*) lt_cv_dlopen_self_static=no ;;
++ esac
++ else :
++ # compilation failed
++ lt_cv_dlopen_self_static=no
++ fi
++fi
++rm -fr conftest*
++
++
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $lt_cv_dlopen_self_static" >&5
++$as_echo "$lt_cv_dlopen_self_static" >&6; }
++ fi
++
++ CPPFLAGS="$save_CPPFLAGS"
++ LDFLAGS="$save_LDFLAGS"
++ LIBS="$save_LIBS"
++ ;;
++ esac
++
++ case $lt_cv_dlopen_self in
++ yes|no) enable_dlopen_self=$lt_cv_dlopen_self ;;
++ *) enable_dlopen_self=unknown ;;
++ esac
++
++ case $lt_cv_dlopen_self_static in
++ yes|no) enable_dlopen_self_static=$lt_cv_dlopen_self_static ;;
++ *) enable_dlopen_self_static=unknown ;;
++ esac
++fi
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++striplib=
++old_striplib=
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking whether stripping libraries is possible" >&5
++$as_echo_n "checking whether stripping libraries is possible... " >&6; }
++if test -n "$STRIP" && $STRIP -V 2>&1 | $GREP "GNU strip" >/dev/null; then
++ test -z "$old_striplib" && old_striplib="$STRIP --strip-debug"
++ test -z "$striplib" && striplib="$STRIP --strip-unneeded"
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
++$as_echo "yes" >&6; }
++else
++# FIXME - insert some real tests, host_os isn't really good enough
++ case $host_os in
++ darwin*)
++ if test -n "$STRIP" ; then
++ striplib="$STRIP -x"
++ old_striplib="$STRIP -S"
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
++$as_echo "yes" >&6; }
++ else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++ fi
++ ;;
++ *)
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++ ;;
++ esac
++fi
++
++
++
++
++
++
++
++
++
++
++
++
++ # Report which library types will actually be built
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking if libtool supports shared libraries" >&5
++$as_echo_n "checking if libtool supports shared libraries... " >&6; }
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $can_build_shared" >&5
++$as_echo "$can_build_shared" >&6; }
++
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking whether to build shared libraries" >&5
++$as_echo_n "checking whether to build shared libraries... " >&6; }
++ test "$can_build_shared" = "no" && enable_shared=no
++
++ # On AIX, shared libraries and static libraries use the same namespace, and
++ # are all built from PIC.
++ case $host_os in
++ aix3*)
++ test "$enable_shared" = yes && enable_static=no
++ if test -n "$RANLIB"; then
++ archive_cmds="$archive_cmds~\$RANLIB \$lib"
++ postinstall_cmds='$RANLIB $lib'
++ fi
++ ;;
++
++ aix[4-9]*)
++ if test "$host_cpu" != ia64 && test "$aix_use_runtimelinking" = no ; then
++ test "$enable_shared" = yes && enable_static=no
++ fi
++ ;;
++ esac
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $enable_shared" >&5
++$as_echo "$enable_shared" >&6; }
++
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking whether to build static libraries" >&5
++$as_echo_n "checking whether to build static libraries... " >&6; }
++ # Make sure either enable_shared or enable_static is yes.
++ test "$enable_shared" = yes || enable_static=yes
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $enable_static" >&5
++$as_echo "$enable_static" >&6; }
++
++
++
++
++fi
++ac_ext=c
++ac_cpp='$CPP $CPPFLAGS'
++ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5'
++ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
++ac_compiler_gnu=$ac_cv_c_compiler_gnu
++
++CC="$lt_save_CC"
++
++
++
++
++
++
++
++
++
++
++
++
++
++ ac_config_commands="$ac_config_commands libtool"
++
++
++
++
++# Only expand once:
++
++
++
++# Checks for programs.
++#as# AC_PROG_CXX
++for ac_prog in gawk mawk nawk awk
++do
++ # Extract the first word of "$ac_prog", so it can be a program name with args.
++set dummy $ac_prog; ac_word=$2
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
++$as_echo_n "checking for $ac_word... " >&6; }
++if test "${ac_cv_prog_AWK+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test -n "$AWK"; then
++ ac_cv_prog_AWK="$AWK" # Let the user override the test.
++else
++as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
++ ac_cv_prog_AWK="$ac_prog"
++ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
++ break 2
++ fi
++done
++ done
++IFS=$as_save_IFS
++
++fi
++fi
++AWK=$ac_cv_prog_AWK
++if test -n "$AWK"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $AWK" >&5
++$as_echo "$AWK" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++
++ test -n "$AWK" && break
++done
++
++ac_ext=c
++ac_cpp='$CPP $CPPFLAGS'
++ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5'
++ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
++ac_compiler_gnu=$ac_cv_c_compiler_gnu
++if test -n "$ac_tool_prefix"; then
++ # Extract the first word of "${ac_tool_prefix}gcc", so it can be a program name with args.
++set dummy ${ac_tool_prefix}gcc; ac_word=$2
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
++$as_echo_n "checking for $ac_word... " >&6; }
++if test "${ac_cv_prog_CC+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test -n "$CC"; then
++ ac_cv_prog_CC="$CC" # Let the user override the test.
++else
++as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
++ ac_cv_prog_CC="${ac_tool_prefix}gcc"
++ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
++ break 2
++ fi
++done
++ done
++IFS=$as_save_IFS
++
++fi
++fi
++CC=$ac_cv_prog_CC
++if test -n "$CC"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $CC" >&5
++$as_echo "$CC" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++
++fi
++if test -z "$ac_cv_prog_CC"; then
++ ac_ct_CC=$CC
++ # Extract the first word of "gcc", so it can be a program name with args.
++set dummy gcc; ac_word=$2
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
++$as_echo_n "checking for $ac_word... " >&6; }
++if test "${ac_cv_prog_ac_ct_CC+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test -n "$ac_ct_CC"; then
++ ac_cv_prog_ac_ct_CC="$ac_ct_CC" # Let the user override the test.
++else
++as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
++ ac_cv_prog_ac_ct_CC="gcc"
++ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
++ break 2
++ fi
++done
++ done
++IFS=$as_save_IFS
++
++fi
++fi
++ac_ct_CC=$ac_cv_prog_ac_ct_CC
++if test -n "$ac_ct_CC"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_ct_CC" >&5
++$as_echo "$ac_ct_CC" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++ if test "x$ac_ct_CC" = x; then
++ CC=""
++ else
++ case $cross_compiling:$ac_tool_warned in
++yes:)
++{ $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: using cross tools not prefixed with host triplet" >&5
++$as_echo "$as_me: WARNING: using cross tools not prefixed with host triplet" >&2;}
++ac_tool_warned=yes ;;
++esac
++ CC=$ac_ct_CC
++ fi
++else
++ CC="$ac_cv_prog_CC"
++fi
++
++if test -z "$CC"; then
++ if test -n "$ac_tool_prefix"; then
++ # Extract the first word of "${ac_tool_prefix}cc", so it can be a program name with args.
++set dummy ${ac_tool_prefix}cc; ac_word=$2
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
++$as_echo_n "checking for $ac_word... " >&6; }
++if test "${ac_cv_prog_CC+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test -n "$CC"; then
++ ac_cv_prog_CC="$CC" # Let the user override the test.
++else
++as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
++ ac_cv_prog_CC="${ac_tool_prefix}cc"
++ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
++ break 2
++ fi
++done
++ done
++IFS=$as_save_IFS
++
++fi
++fi
++CC=$ac_cv_prog_CC
++if test -n "$CC"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $CC" >&5
++$as_echo "$CC" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++
++ fi
++fi
++if test -z "$CC"; then
++ # Extract the first word of "cc", so it can be a program name with args.
++set dummy cc; ac_word=$2
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
++$as_echo_n "checking for $ac_word... " >&6; }
++if test "${ac_cv_prog_CC+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test -n "$CC"; then
++ ac_cv_prog_CC="$CC" # Let the user override the test.
++else
++ ac_prog_rejected=no
++as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
++ if test "$as_dir/$ac_word$ac_exec_ext" = "/usr/ucb/cc"; then
++ ac_prog_rejected=yes
++ continue
++ fi
++ ac_cv_prog_CC="cc"
++ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
++ break 2
++ fi
++done
++ done
++IFS=$as_save_IFS
++
++if test $ac_prog_rejected = yes; then
++ # We found a bogon in the path, so make sure we never use it.
++ set dummy $ac_cv_prog_CC
++ shift
++ if test $@%:@ != 0; then
++ # We chose a different compiler from the bogus one.
++ # However, it has the same basename, so the bogon will be chosen
++ # first if we set CC to just the basename; use the full file name.
++ shift
++ ac_cv_prog_CC="$as_dir/$ac_word${1+' '}$@"
++ fi
++fi
++fi
++fi
++CC=$ac_cv_prog_CC
++if test -n "$CC"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $CC" >&5
++$as_echo "$CC" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++
++fi
++if test -z "$CC"; then
++ if test -n "$ac_tool_prefix"; then
++ for ac_prog in cl.exe
++ do
++ # Extract the first word of "$ac_tool_prefix$ac_prog", so it can be a program name with args.
++set dummy $ac_tool_prefix$ac_prog; ac_word=$2
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
++$as_echo_n "checking for $ac_word... " >&6; }
++if test "${ac_cv_prog_CC+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test -n "$CC"; then
++ ac_cv_prog_CC="$CC" # Let the user override the test.
++else
++as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
++ ac_cv_prog_CC="$ac_tool_prefix$ac_prog"
++ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
++ break 2
++ fi
++done
++ done
++IFS=$as_save_IFS
++
++fi
++fi
++CC=$ac_cv_prog_CC
++if test -n "$CC"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $CC" >&5
++$as_echo "$CC" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++
++ test -n "$CC" && break
++ done
++fi
++if test -z "$CC"; then
++ ac_ct_CC=$CC
++ for ac_prog in cl.exe
++do
++ # Extract the first word of "$ac_prog", so it can be a program name with args.
++set dummy $ac_prog; ac_word=$2
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
++$as_echo_n "checking for $ac_word... " >&6; }
++if test "${ac_cv_prog_ac_ct_CC+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test -n "$ac_ct_CC"; then
++ ac_cv_prog_ac_ct_CC="$ac_ct_CC" # Let the user override the test.
++else
++as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
++ ac_cv_prog_ac_ct_CC="$ac_prog"
++ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
++ break 2
++ fi
++done
++ done
++IFS=$as_save_IFS
++
++fi
++fi
++ac_ct_CC=$ac_cv_prog_ac_ct_CC
++if test -n "$ac_ct_CC"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_ct_CC" >&5
++$as_echo "$ac_ct_CC" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++
++ test -n "$ac_ct_CC" && break
++done
++
++ if test "x$ac_ct_CC" = x; then
++ CC=""
++ else
++ case $cross_compiling:$ac_tool_warned in
++yes:)
++{ $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: using cross tools not prefixed with host triplet" >&5
++$as_echo "$as_me: WARNING: using cross tools not prefixed with host triplet" >&2;}
++ac_tool_warned=yes ;;
++esac
++ CC=$ac_ct_CC
++ fi
++fi
++
++fi
++
++
++test -z "$CC" && { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
++$as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
++as_fn_error "no acceptable C compiler found in \$PATH
++See \`config.log' for more details." "$LINENO" 5; }
++
++# Provide some information about the compiler.
++$as_echo "$as_me:${as_lineno-$LINENO}: checking for C compiler version" >&5
++set X $ac_compile
++ac_compiler=$2
++for ac_option in --version -v -V -qversion; do
++ { { ac_try="$ac_compiler $ac_option >&5"
++case "(($ac_try" in
++ *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
++ *) ac_try_echo=$ac_try;;
++esac
++eval ac_try_echo="\"\$as_me:${as_lineno-$LINENO}: $ac_try_echo\""
++$as_echo "$ac_try_echo"; } >&5
++ (eval "$ac_compiler $ac_option >&5") 2>conftest.err
++ ac_status=$?
++ if test -s conftest.err; then
++ sed '10a\
++... rest of stderr output deleted ...
++ 10q' conftest.err >conftest.er1
++ cat conftest.er1 >&5
++ fi
++ rm -f conftest.er1 conftest.err
++ $as_echo "$as_me:${as_lineno-$LINENO}: \$? = $ac_status" >&5
++ test $ac_status = 0; }
++done
++
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking whether we are using the GNU C compiler" >&5
++$as_echo_n "checking whether we are using the GNU C compiler... " >&6; }
++if test "${ac_cv_c_compiler_gnu+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++int
++main ()
++{
++#ifndef __GNUC__
++ choke me
++#endif
++
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_compile "$LINENO"; then :
++ ac_compiler_gnu=yes
++else
++ ac_compiler_gnu=no
++fi
++rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
++ac_cv_c_compiler_gnu=$ac_compiler_gnu
++
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_c_compiler_gnu" >&5
++$as_echo "$ac_cv_c_compiler_gnu" >&6; }
++if test $ac_compiler_gnu = yes; then
++ GCC=yes
++else
++ GCC=
++fi
++ac_test_CFLAGS=${CFLAGS+set}
++ac_save_CFLAGS=$CFLAGS
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking whether $CC accepts -g" >&5
++$as_echo_n "checking whether $CC accepts -g... " >&6; }
++if test "${ac_cv_prog_cc_g+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ ac_save_c_werror_flag=$ac_c_werror_flag
++ ac_c_werror_flag=yes
++ ac_cv_prog_cc_g=no
++ CFLAGS="-g"
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++int
++main ()
++{
++
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_compile "$LINENO"; then :
++ ac_cv_prog_cc_g=yes
++else
++ CFLAGS=""
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++int
++main ()
++{
++
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_compile "$LINENO"; then :
++
++else
++ ac_c_werror_flag=$ac_save_c_werror_flag
++ CFLAGS="-g"
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++int
++main ()
++{
++
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_compile "$LINENO"; then :
++ ac_cv_prog_cc_g=yes
++fi
++rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
++fi
++rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
++fi
++rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
++ ac_c_werror_flag=$ac_save_c_werror_flag
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_prog_cc_g" >&5
++$as_echo "$ac_cv_prog_cc_g" >&6; }
++if test "$ac_test_CFLAGS" = set; then
++ CFLAGS=$ac_save_CFLAGS
++elif test $ac_cv_prog_cc_g = yes; then
++ if test "$GCC" = yes; then
++ CFLAGS="-g -O2"
++ else
++ CFLAGS="-g"
++ fi
++else
++ if test "$GCC" = yes; then
++ CFLAGS="-O2"
++ else
++ CFLAGS=
++ fi
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $CC option to accept ISO C89" >&5
++$as_echo_n "checking for $CC option to accept ISO C89... " >&6; }
++if test "${ac_cv_prog_cc_c89+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ ac_cv_prog_cc_c89=no
++ac_save_CC=$CC
++cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++#include <stdarg.h>
++#include <stdio.h>
++#include <sys/types.h>
++#include <sys/stat.h>
++/* Most of the following tests are stolen from RCS 5.7's src/conf.sh. */
++struct buf { int x; };
++FILE * (*rcsopen) (struct buf *, struct stat *, int);
++static char *e (p, i)
++ char **p;
++ int i;
++{
++ return p[i];
++}
++static char *f (char * (*g) (char **, int), char **p, ...)
++{
++ char *s;
++ va_list v;
++ va_start (v,p);
++ s = g (p, va_arg (v,int));
++ va_end (v);
++ return s;
++}
++
++/* OSF 4.0 Compaq cc is some sort of almost-ANSI by default. It has
++ function prototypes and stuff, but not '\xHH' hex character constants.
++ These don't provoke an error unfortunately, instead are silently treated
++ as 'x'. The following induces an error, until -std is added to get
++ proper ANSI mode. Curiously '\x00'!='x' always comes out true, for an
++ array size at least. It's necessary to write '\x00'==0 to get something
++ that's true only with -std. */
++int osf4_cc_array ['\x00' == 0 ? 1 : -1];
++
++/* IBM C 6 for AIX is almost-ANSI by default, but it replaces macro parameters
++ inside strings and character constants. */
++#define FOO(x) 'x'
++int xlc6_cc_array[FOO(a) == 'x' ? 1 : -1];
++
++int test (int i, double x);
++struct s1 {int (*f) (int a);};
++struct s2 {int (*f) (double a);};
++int pairnames (int, char **, FILE *(*)(struct buf *, struct stat *, int), int, int);
++int argc;
++char **argv;
++int
++main ()
++{
++return f (e, argv, 0) != argv[0] || f (e, argv, 1) != argv[1];
++ ;
++ return 0;
++}
++_ACEOF
++for ac_arg in '' -qlanglvl=extc89 -qlanglvl=ansi -std \
++ -Ae "-Aa -D_HPUX_SOURCE" "-Xc -D__EXTENSIONS__"
++do
++ CC="$ac_save_CC $ac_arg"
++ if ac_fn_c_try_compile "$LINENO"; then :
++ ac_cv_prog_cc_c89=$ac_arg
++fi
++rm -f core conftest.err conftest.$ac_objext
++ test "x$ac_cv_prog_cc_c89" != "xno" && break
++done
++rm -f conftest.$ac_ext
++CC=$ac_save_CC
++
++fi
++# AC_CACHE_VAL
++case "x$ac_cv_prog_cc_c89" in
++ x)
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: none needed" >&5
++$as_echo "none needed" >&6; } ;;
++ xno)
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: unsupported" >&5
++$as_echo "unsupported" >&6; } ;;
++ *)
++ CC="$CC $ac_cv_prog_cc_c89"
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_prog_cc_c89" >&5
++$as_echo "$ac_cv_prog_cc_c89" >&6; } ;;
++esac
++if test "x$ac_cv_prog_cc_c89" != xno; then :
++
++fi
++
++ac_ext=c
++ac_cpp='$CPP $CPPFLAGS'
++ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5'
++ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
++ac_compiler_gnu=$ac_cv_c_compiler_gnu
++
++depcc="$CC" am_compiler_list=
++
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking dependency style of $depcc" >&5
++$as_echo_n "checking dependency style of $depcc... " >&6; }
++if test "${am_cv_CC_dependencies_compiler_type+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test -z "$AMDEP_TRUE" && test -f "$am_depcomp"; then
++ # We make a subdir and do the tests there. Otherwise we can end up
++ # making bogus files that we don't know about and never remove. For
++ # instance it was reported that on HP-UX the gcc test will end up
++ # making a dummy file named `D' -- because `-MD' means `put the output
++ # in D'.
++ mkdir conftest.dir
++ # Copy depcomp to subdir because otherwise we won't find it if we're
++ # using a relative directory.
++ cp "$am_depcomp" conftest.dir
++ cd conftest.dir
++ # We will build objects and dependencies in a subdirectory because
++ # it helps to detect inapplicable dependency modes. For instance
++ # both Tru64's cc and ICC support -MD to output dependencies as a
++ # side effect of compilation, but ICC will put the dependencies in
++ # the current directory while Tru64 will put them in the object
++ # directory.
++ mkdir sub
++
++ am_cv_CC_dependencies_compiler_type=none
++ if test "$am_compiler_list" = ""; then
++ am_compiler_list=`sed -n 's/^#*\([a-zA-Z0-9]*\))$/\1/p' < ./depcomp`
++ fi
++ am__universal=false
++ case " $depcc " in #(
++ *\ -arch\ *\ -arch\ *) am__universal=true ;;
++ esac
++
++ for depmode in $am_compiler_list; do
++ # Setup a source with many dependencies, because some compilers
++ # like to wrap large dependency lists on column 80 (with \), and
++ # we should not choose a depcomp mode which is confused by this.
++ #
++ # We need to recreate these files for each test, as the compiler may
++ # overwrite some of them when testing with obscure command lines.
++ # This happens at least with the AIX C compiler.
++ : > sub/conftest.c
++ for i in 1 2 3 4 5 6; do
++ echo '#include "conftst'$i'.h"' >> sub/conftest.c
++ # Using `: > sub/conftst$i.h' creates only sub/conftst1.h with
++ # Solaris 8's {/usr,}/bin/sh.
++ touch sub/conftst$i.h
++ done
++ echo "${am__include} ${am__quote}sub/conftest.Po${am__quote}" > confmf
++
++ # We check with `-c' and `-o' for the sake of the "dashmstdout"
++ # mode. It turns out that the SunPro C++ compiler does not properly
++ # handle `-M -o', and we need to detect this. Also, some Intel
++ # versions had trouble with output in subdirs
++ am__obj=sub/conftest.${OBJEXT-o}
++ am__minus_obj="-o $am__obj"
++ case $depmode in
++ gcc)
++ # This depmode causes a compiler race in universal mode.
++ test "$am__universal" = false || continue
++ ;;
++ nosideeffect)
++ # after this tag, mechanisms are not by side-effect, so they'll
++ # only be used when explicitly requested
++ if test "x$enable_dependency_tracking" = xyes; then
++ continue
++ else
++ break
++ fi
++ ;;
++ msvisualcpp | msvcmsys)
++ # This compiler won't grok `-c -o', but also, the minuso test has
++ # not run yet. These depmodes are late enough in the game, and
++ # so weak that their functioning should not be impacted.
++ am__obj=conftest.${OBJEXT-o}
++ am__minus_obj=
++ ;;
++ none) break ;;
++ esac
++ if depmode=$depmode \
++ source=sub/conftest.c object=$am__obj \
++ depfile=sub/conftest.Po tmpdepfile=sub/conftest.TPo \
++ $SHELL ./depcomp $depcc -c $am__minus_obj sub/conftest.c \
++ >/dev/null 2>conftest.err &&
++ grep sub/conftst1.h sub/conftest.Po > /dev/null 2>&1 &&
++ grep sub/conftst6.h sub/conftest.Po > /dev/null 2>&1 &&
++ grep $am__obj sub/conftest.Po > /dev/null 2>&1 &&
++ ${MAKE-make} -s -f confmf > /dev/null 2>&1; then
++ # icc doesn't choke on unknown options, it will just issue warnings
++ # or remarks (even with -Werror). So we grep stderr for any message
++ # that says an option was ignored or not supported.
++ # When given -MP, icc 7.0 and 7.1 complain thusly:
++ # icc: Command line warning: ignoring option '-M'; no argument required
++ # The diagnosis changed in icc 8.0:
++ # icc: Command line remark: option '-MP' not supported
++ if (grep 'ignoring option' conftest.err ||
++ grep 'not supported' conftest.err) >/dev/null 2>&1; then :; else
++ am_cv_CC_dependencies_compiler_type=$depmode
++ break
++ fi
++ fi
++ done
++
++ cd ..
++ rm -rf conftest.dir
++else
++ am_cv_CC_dependencies_compiler_type=none
++fi
++
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $am_cv_CC_dependencies_compiler_type" >&5
++$as_echo "$am_cv_CC_dependencies_compiler_type" >&6; }
++CCDEPMODE=depmode=$am_cv_CC_dependencies_compiler_type
++
++ if
++ test "x$enable_dependency_tracking" != xno \
++ && test "$am_cv_CC_dependencies_compiler_type" = gcc3; then
++ am__fastdepCC_TRUE=
++ am__fastdepCC_FALSE='#'
++else
++ am__fastdepCC_TRUE='#'
++ am__fastdepCC_FALSE=
++fi
++
++
++ac_ext=c
++ac_cpp='$CPP $CPPFLAGS'
++ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5'
++ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
++ac_compiler_gnu=$ac_cv_c_compiler_gnu
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking how to run the C preprocessor" >&5
++$as_echo_n "checking how to run the C preprocessor... " >&6; }
++# On Suns, sometimes $CPP names a directory.
++if test -n "$CPP" && test -d "$CPP"; then
++ CPP=
++fi
++if test -z "$CPP"; then
++ if test "${ac_cv_prog_CPP+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ # Double quotes because CPP needs to be expanded
++ for CPP in "$CC -E" "$CC -E -traditional-cpp" "/lib/cpp"
++ do
++ ac_preproc_ok=false
++for ac_c_preproc_warn_flag in '' yes
++do
++ # Use a header file that comes with gcc, so configuring glibc
++ # with a fresh cross-compiler works.
++ # Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
++ # <limits.h> exists even on freestanding compilers.
++ # On the NeXT, cc -E runs the code through the compiler's parser,
++ # not just through cpp. "Syntax error" is here to catch this case.
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++@%:@ifdef __STDC__
++@%:@ include <limits.h>
++@%:@else
++@%:@ include <assert.h>
++@%:@endif
++ Syntax error
++_ACEOF
++if ac_fn_c_try_cpp "$LINENO"; then :
++
++else
++ # Broken: fails on valid input.
++continue
++fi
++rm -f conftest.err conftest.$ac_ext
++
++ # OK, works on sane cases. Now check whether nonexistent headers
++ # can be detected and how.
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++@%:@include <ac_nonexistent.h>
++_ACEOF
++if ac_fn_c_try_cpp "$LINENO"; then :
++ # Broken: success on invalid input.
++continue
++else
++ # Passes both tests.
++ac_preproc_ok=:
++break
++fi
++rm -f conftest.err conftest.$ac_ext
++
++done
++# Because of `break', _AC_PREPROC_IFELSE's cleaning code was skipped.
++rm -f conftest.err conftest.$ac_ext
++if $ac_preproc_ok; then :
++ break
++fi
++
++ done
++ ac_cv_prog_CPP=$CPP
++
++fi
++ CPP=$ac_cv_prog_CPP
++else
++ ac_cv_prog_CPP=$CPP
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $CPP" >&5
++$as_echo "$CPP" >&6; }
++ac_preproc_ok=false
++for ac_c_preproc_warn_flag in '' yes
++do
++ # Use a header file that comes with gcc, so configuring glibc
++ # with a fresh cross-compiler works.
++ # Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
++ # <limits.h> exists even on freestanding compilers.
++ # On the NeXT, cc -E runs the code through the compiler's parser,
++ # not just through cpp. "Syntax error" is here to catch this case.
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++@%:@ifdef __STDC__
++@%:@ include <limits.h>
++@%:@else
++@%:@ include <assert.h>
++@%:@endif
++ Syntax error
++_ACEOF
++if ac_fn_c_try_cpp "$LINENO"; then :
++
++else
++ # Broken: fails on valid input.
++continue
++fi
++rm -f conftest.err conftest.$ac_ext
++
++ # OK, works on sane cases. Now check whether nonexistent headers
++ # can be detected and how.
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++@%:@include <ac_nonexistent.h>
++_ACEOF
++if ac_fn_c_try_cpp "$LINENO"; then :
++ # Broken: success on invalid input.
++continue
++else
++ # Passes both tests.
++ac_preproc_ok=:
++break
++fi
++rm -f conftest.err conftest.$ac_ext
++
++done
++# Because of `break', _AC_PREPROC_IFELSE's cleaning code was skipped.
++rm -f conftest.err conftest.$ac_ext
++if $ac_preproc_ok; then :
++
++else
++ { { $as_echo "$as_me:${as_lineno-$LINENO}: error: in \`$ac_pwd':" >&5
++$as_echo "$as_me: error: in \`$ac_pwd':" >&2;}
++as_fn_error "C preprocessor \"$CPP\" fails sanity check
++See \`config.log' for more details." "$LINENO" 5; }
++fi
++
++ac_ext=c
++ac_cpp='$CPP $CPPFLAGS'
++ac_compile='$CC -c $CFLAGS $CPPFLAGS conftest.$ac_ext >&5'
++ac_link='$CC -o conftest$ac_exeext $CFLAGS $CPPFLAGS $LDFLAGS conftest.$ac_ext $LIBS >&5'
++ac_compiler_gnu=$ac_cv_c_compiler_gnu
++
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for inline" >&5
++$as_echo_n "checking for inline... " >&6; }
++if test "${ac_cv_c_inline+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ ac_cv_c_inline=no
++for ac_kw in inline __inline__ __inline; do
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++#ifndef __cplusplus
++typedef int foo_t;
++static $ac_kw foo_t static_foo () {return 0; }
++$ac_kw foo_t foo () {return 0; }
++#endif
++
++_ACEOF
++if ac_fn_c_try_compile "$LINENO"; then :
++ ac_cv_c_inline=$ac_kw
++fi
++rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
++ test "$ac_cv_c_inline" != no && break
++done
++
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_c_inline" >&5
++$as_echo "$ac_cv_c_inline" >&6; }
++
++case $ac_cv_c_inline in
++ inline | yes) ;;
++ *)
++ case $ac_cv_c_inline in
++ no) ac_val=;;
++ *) ac_val=$ac_cv_c_inline;;
++ esac
++ cat >>confdefs.h <<_ACEOF
++#ifndef __cplusplus
++#define inline $ac_val
++#endif
++_ACEOF
++ ;;
++esac
++
++#as# AC_PROG_INSTALL
++#as# AC_PROG_LN_S
++#as# AC_PROG_MAKE_SET
++#as# AC_PROG_RANLIB
++
++# Checks for libraries.
++
++# none needed for the libraries we build
++# external library dependencies tested in m4 macros: X11 gd, z, png
++
++
++
++
++if test "$CC" != "gcc"; then
++
++if test "`uname`" = "IRIX" || test "`uname`" = "IRIX64" ; then
++if test "$CC" != "gcc"; then
++ CFLAGS="$CFLAGS"
++ #
++# Handle SGI compiler flags
++#
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for sgiabi" >&5
++$as_echo_n "checking for sgiabi... " >&6; }
++
++@%:@ Check whether --with-sgiabi was given.
++if test "${with_sgiabi+set}" = set; then :
++ withval=$with_sgiabi; if test "$withval" != no ; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
++$as_echo "yes" >&6; }
++
++ if test "`uname`" = "IRIX64" || test "`uname`" = "IRIX" ; then
++
++ if test "$withval" = n32m3 ; then
++ CFLAGS="-n32 -mips3 $CFLAGS"
++ LD="/usr/bin/ld -n32 -mips3 -IPA -L/usr/lib32"
++ if test -d /usr/freeware ; then
++ LDFLAGS="-L/usr/freeware/lib32 $LDFLAGS"
++ fi
++ fi
++
++ if test "$withval" = n32m4 ; then
++ CFLAGS="-n32 -mips4 $CFLAGS"
++ LD="/usr/bin/ld -n32 -mips4 -IPA -L/usr/lib32"
++ if test -d /usr/freeware ; then
++ LDFLAGS="-L/usr/freeware/lib32 $LDFLAGS"
++ fi
++ fi
++
++ if test "$withval" = 64m3 ; then
++ CFLAGS="-64 -mips3 $CFLAGS"
++ LD="/usr/bin/ld -64 -mips3 -IPA -L/usr/lib64"
++ if test -d /usr/freeware ; then
++ LDFLAGS="-L/usr/freeware/lib64 $LDFLAGS"
++ fi
++ fi
++
++ if test "$withval" = 64m4 ; then
++ CFLAGS="-64 -mips4 $CFLAGS"
++ LD="/usr/bin/ld -64 -mips4 -IPA -L/usr/lib64"
++ if test -d /usr/freeware ; then
++ LDFLAGS="-L/usr/freeware/lib64 $LDFLAGS"
++ fi
++ fi
++
++ fi
++
++
++fi
++else
++
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++
++fi
++
++
++
++fi
++fi
++
++
++
++if test "${enable_64+set}" != set; then
++enable_64=no
++fi
++
++
++@%:@ Check whether --enable-64 was given.
++if test "${enable_64+set}" = set; then :
++ enableval=$enable_64;
++fi
++
++if test "${enable_64}" = "yes" ; then
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for 64bit compilation support" >&5
++$as_echo_n "checking for 64bit compilation support... " >&6; }
++
++
++if test "`uname`" = "Linux"; then
++CPPFLAGS="-DAJ_Linux64 $CPPFLAGS"
++fi
++
++
++if test "`uname`" = "FreeBSD"; then
++CPPFLAGS="-DAJ_FreeBSD64 $CPPFLAGS"
++fi
++
++
++
++
++if test "`uname`" = "OSF1"; then
++CPPFLAGS="-DAJ_OSF164 $CPPFLAGS"
++fi
++
++
++if test "`uname`" = "IRIX" || test "`uname`" = "IRIX64"; then
++CPPFLAGS="-DAJ_IRIX64 $CPPFLAGS"
++fi
++
++
++if test "`uname`" = "AIX"; then
++CPPFLAGS="-DAJ_AIX64 $CPPFLAGS"
++if test "$CC" != "gcc"; then
++CC="$CC -q64"
++fi
++NM="nm -B -X 64"
++AR="ar -X 64"
++fi
++
++
++if test "`uname`" = "HP-UX"; then
++if test "$CC" != "gcc"; then
++CC="$CC +DD64"
++fi
++CPPFLAGS="-DAJ_HPUX64 $CPPFLAGS"
++fi
++
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: done" >&5
++$as_echo "done" >&6; }
++fi
++
++
++
++
++
++
++
++
++
++if test "`uname`" = "AIX"; then
++CFLAGS="$CFLAGS -O3 -qstrict -qarch=auto -qtune=auto"
++fi
++
++
++if test "`uname`" = "IRIX" || test "`uname`" = "IRIX64" ; then
++LD="/usr/bin/ld -IPA"
++CFLAGS="$CFLAGS -O3"
++fi
++
++
++if test "`uname`" = "HP-UX"; then
++CFLAGS="$CFLAGS -fast"
++fi
++
++
++if test "`uname`" = "OSF1"; then
++CFLAGS="$CFLAGS -fast -U_FASTMATH"
++fi
++
++
++if test "`uname`" = "SunOS"; then
++CFLAGS="$CFLAGS -O"
++
++
++if test "${enable_64}" = "yes" ; then
++CFLAGS="$CFLAGS -xtarget=ultra -xarch=v9"
++fi
++fi
++
++
++if test "`uname`" = "Linux"; then
++CFLAGS="$CFLAGS -O2"
++fi
++
++
++if test "`uname`" = "FreeBSD"; then
++CFLAGS="$CFLAGS -O2"
++fi
++
++
++
++else
++
++
++if test "`uname -a | grep Darwin`"; then
++ if test "`uname -a | grep i386`"; then
++ CFLAGS="$CFLAGS -O1"
++ else
++ CFLAGS="$CFLAGS -O2"
++ fi
++
++else
++CFLAGS="$CFLAGS -O2"
++fi
++
++fi
++
++
++
++if test "`uname`" = "SunOS"; then
++CFLAGS="$CFLAGS -D__EXTENSIONS__"
++fi
++
++
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking whether byte ordering is bigendian" >&5
++$as_echo_n "checking whether byte ordering is bigendian... " >&6; }
++if test "${ac_cv_c_bigendian+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ ac_cv_c_bigendian=unknown
++ # See if we're dealing with a universal compiler.
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++#ifndef __APPLE_CC__
++ not a universal capable compiler
++ #endif
++ typedef int dummy;
++
++_ACEOF
++if ac_fn_c_try_compile "$LINENO"; then :
++
++ # Check for potential -arch flags. It is not universal unless
++ # there are at least two -arch flags with different values.
++ ac_arch=
++ ac_prev=
++ for ac_word in $CC $CFLAGS $CPPFLAGS $LDFLAGS; do
++ if test -n "$ac_prev"; then
++ case $ac_word in
++ i?86 | x86_64 | ppc | ppc64)
++ if test -z "$ac_arch" || test "$ac_arch" = "$ac_word"; then
++ ac_arch=$ac_word
++ else
++ ac_cv_c_bigendian=universal
++ break
++ fi
++ ;;
++ esac
++ ac_prev=
++ elif test "x$ac_word" = "x-arch"; then
++ ac_prev=arch
++ fi
++ done
++fi
++rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
++ if test $ac_cv_c_bigendian = unknown; then
++ # See if sys/param.h defines the BYTE_ORDER macro.
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++#include <sys/types.h>
++ #include <sys/param.h>
++
++int
++main ()
++{
++#if ! (defined BYTE_ORDER && defined BIG_ENDIAN \
++ && defined LITTLE_ENDIAN && BYTE_ORDER && BIG_ENDIAN \
++ && LITTLE_ENDIAN)
++ bogus endian macros
++ #endif
++
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_compile "$LINENO"; then :
++ # It does; now see whether it defined to BIG_ENDIAN or not.
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++#include <sys/types.h>
++ #include <sys/param.h>
++
++int
++main ()
++{
++#if BYTE_ORDER != BIG_ENDIAN
++ not big endian
++ #endif
++
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_compile "$LINENO"; then :
++ ac_cv_c_bigendian=yes
++else
++ ac_cv_c_bigendian=no
++fi
++rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
++fi
++rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
++ fi
++ if test $ac_cv_c_bigendian = unknown; then
++ # See if <limits.h> defines _LITTLE_ENDIAN or _BIG_ENDIAN (e.g., Solaris).
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++#include <limits.h>
++
++int
++main ()
++{
++#if ! (defined _LITTLE_ENDIAN || defined _BIG_ENDIAN)
++ bogus endian macros
++ #endif
++
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_compile "$LINENO"; then :
++ # It does; now see whether it defined to _BIG_ENDIAN or not.
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++#include <limits.h>
++
++int
++main ()
++{
++#ifndef _BIG_ENDIAN
++ not big endian
++ #endif
++
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_compile "$LINENO"; then :
++ ac_cv_c_bigendian=yes
++else
++ ac_cv_c_bigendian=no
++fi
++rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
++fi
++rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
++ fi
++ if test $ac_cv_c_bigendian = unknown; then
++ # Compile a test program.
++ if test "$cross_compiling" = yes; then :
++ # Try to guess by grepping values from an object file.
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++short int ascii_mm[] =
++ { 0x4249, 0x4765, 0x6E44, 0x6961, 0x6E53, 0x7953, 0 };
++ short int ascii_ii[] =
++ { 0x694C, 0x5454, 0x656C, 0x6E45, 0x6944, 0x6E61, 0 };
++ int use_ascii (int i) {
++ return ascii_mm[i] + ascii_ii[i];
++ }
++ short int ebcdic_ii[] =
++ { 0x89D3, 0xE3E3, 0x8593, 0x95C5, 0x89C4, 0x9581, 0 };
++ short int ebcdic_mm[] =
++ { 0xC2C9, 0xC785, 0x95C4, 0x8981, 0x95E2, 0xA8E2, 0 };
++ int use_ebcdic (int i) {
++ return ebcdic_mm[i] + ebcdic_ii[i];
++ }
++ extern int foo;
++
++int
++main ()
++{
++return use_ascii (foo) == use_ebcdic (foo);
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_compile "$LINENO"; then :
++ if grep BIGenDianSyS conftest.$ac_objext >/dev/null; then
++ ac_cv_c_bigendian=yes
++ fi
++ if grep LiTTleEnDian conftest.$ac_objext >/dev/null ; then
++ if test "$ac_cv_c_bigendian" = unknown; then
++ ac_cv_c_bigendian=no
++ else
++ # finding both strings is unlikely to happen, but who knows?
++ ac_cv_c_bigendian=unknown
++ fi
++ fi
++fi
++rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
++else
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++$ac_includes_default
++int
++main ()
++{
++
++ /* Are we little or big endian? From Harbison&Steele. */
++ union
++ {
++ long int l;
++ char c[sizeof (long int)];
++ } u;
++ u.l = 1;
++ return u.c[sizeof (long int) - 1] == 1;
++
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_run "$LINENO"; then :
++ ac_cv_c_bigendian=no
++else
++ ac_cv_c_bigendian=yes
++fi
++rm -f core *.core core.conftest.* gmon.out bb.out conftest$ac_exeext \
++ conftest.$ac_objext conftest.beam conftest.$ac_ext
++fi
++
++ fi
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_c_bigendian" >&5
++$as_echo "$ac_cv_c_bigendian" >&6; }
++ case $ac_cv_c_bigendian in #(
++ yes)
++ CPPFLAGS="$CPPFLAGS -DBENDIAN";; #(
++ no)
++ CPPFLAGS="$CPPFLAGS -DLENDIAN" ;; #(
++ universal)
++
++$as_echo "@%:@define AC_APPLE_UNIVERSAL_BUILD 1" >>confdefs.h
++
++ ;; #(
++ *)
++ as_fn_error "unknown endianness
++ presetting ac_cv_c_bigendian=no (or yes) will help" "$LINENO" 5 ;;
++ esac
++
++
++
++
++AJAX_FIXED_ROOT="\\\"`pwd`/emboss\\\""
++
++EMBOSS_TOP=`pwd`
++
++AJAX_SYSTEM="\\\"`uname`\\\""
++
++
++
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking whether ln -s works" >&5
++$as_echo_n "checking whether ln -s works... " >&6; }
++LN_S=$as_ln_s
++if test "$LN_S" = "ln -s"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
++$as_echo "yes" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no, using $LN_S" >&5
++$as_echo "no, using $LN_S" >&6; }
++fi
++
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking whether ${MAKE-make} sets \$(MAKE)" >&5
++$as_echo_n "checking whether ${MAKE-make} sets \$(MAKE)... " >&6; }
++set x ${MAKE-make}
++ac_make=`$as_echo "$2" | sed 's/+/p/g; s/[^a-zA-Z0-9_]/_/g'`
++if { as_var=ac_cv_prog_make_${ac_make}_set; eval "test \"\${$as_var+set}\" = set"; }; then :
++ $as_echo_n "(cached) " >&6
++else
++ cat >conftest.make <<\_ACEOF
++SHELL = /bin/sh
++all:
++ @echo '@@@%%%=$(MAKE)=@@@%%%'
++_ACEOF
++# GNU make sometimes prints "make[1]: Entering...", which would confuse us.
++case `${MAKE-make} -f conftest.make 2>/dev/null` in
++ *@@@%%%=?*=@@@%%%*)
++ eval ac_cv_prog_make_${ac_make}_set=yes;;
++ *)
++ eval ac_cv_prog_make_${ac_make}_set=no;;
++esac
++rm -f conftest.make
++fi
++if eval test \$ac_cv_prog_make_${ac_make}_set = yes; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
++$as_echo "yes" >&6; }
++ SET_MAKE=
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++ SET_MAKE="MAKE=${MAKE-make}"
++fi
++
++
++if test "${with_x}" != "no" ; then
++if test "`uname -a | grep Darwin`"; then
++OSXX=`sw_vers -productVersion | sed 's/\(10\.[0-9]*\).*/\1/'`
++if test ${OSXX} '>' '10.4'; then
++CFLAGS="$CFLAGS -I/usr/X11/include -L/usr/X11/lib"
++fi
++fi
++fi
++
++# Checks for header files.
++#as# AC_PATH_X
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for X" >&5
++$as_echo_n "checking for X... " >&6; }
++
++
++@%:@ Check whether --with-x was given.
++if test "${with_x+set}" = set; then :
++ withval=$with_x;
++fi
++
++# $have_x is `yes', `no', `disabled', or empty when we do not yet know.
++if test "x$with_x" = xno; then
++ # The user explicitly disabled X.
++ have_x=disabled
++else
++ case $x_includes,$x_libraries in #(
++ *\'*) as_fn_error "cannot use X directory names containing '" "$LINENO" 5;; #(
++ *,NONE | NONE,*) if test "${ac_cv_have_x+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ # One or both of the vars are not set, and there is no cached value.
++ac_x_includes=no ac_x_libraries=no
++rm -f -r conftest.dir
++if mkdir conftest.dir; then
++ cd conftest.dir
++ cat >Imakefile <<'_ACEOF'
++incroot:
++ @echo incroot='${INCROOT}'
++usrlibdir:
++ @echo usrlibdir='${USRLIBDIR}'
++libdir:
++ @echo libdir='${LIBDIR}'
++_ACEOF
++ if (export CC; ${XMKMF-xmkmf}) >/dev/null 2>/dev/null && test -f Makefile; then
++ # GNU make sometimes prints "make[1]: Entering...", which would confuse us.
++ for ac_var in incroot usrlibdir libdir; do
++ eval "ac_im_$ac_var=\`\${MAKE-make} $ac_var 2>/dev/null | sed -n 's/^$ac_var=//p'\`"
++ done
++ # Open Windows xmkmf reportedly sets LIBDIR instead of USRLIBDIR.
++ for ac_extension in a so sl dylib la dll; do
++ if test ! -f "$ac_im_usrlibdir/libX11.$ac_extension" &&
++ test -f "$ac_im_libdir/libX11.$ac_extension"; then
++ ac_im_usrlibdir=$ac_im_libdir; break
++ fi
++ done
++ # Screen out bogus values from the imake configuration. They are
++ # bogus both because they are the default anyway, and because
++ # using them would break gcc on systems where it needs fixed includes.
++ case $ac_im_incroot in
++ /usr/include) ac_x_includes= ;;
++ *) test -f "$ac_im_incroot/X11/Xos.h" && ac_x_includes=$ac_im_incroot;;
++ esac
++ case $ac_im_usrlibdir in
++ /usr/lib | /usr/lib64 | /lib | /lib64) ;;
++ *) test -d "$ac_im_usrlibdir" && ac_x_libraries=$ac_im_usrlibdir ;;
++ esac
++ fi
++ cd ..
++ rm -f -r conftest.dir
++fi
++
++# Standard set of common directories for X headers.
++# Check X11 before X11Rn because it is often a symlink to the current release.
++ac_x_header_dirs='
++/usr/X11/include
++/usr/X11R7/include
++/usr/X11R6/include
++/usr/X11R5/include
++/usr/X11R4/include
++
++/usr/include/X11
++/usr/include/X11R7
++/usr/include/X11R6
++/usr/include/X11R5
++/usr/include/X11R4
++
++/usr/local/X11/include
++/usr/local/X11R7/include
++/usr/local/X11R6/include
++/usr/local/X11R5/include
++/usr/local/X11R4/include
++
++/usr/local/include/X11
++/usr/local/include/X11R7
++/usr/local/include/X11R6
++/usr/local/include/X11R5
++/usr/local/include/X11R4
++
++/usr/X386/include
++/usr/x386/include
++/usr/XFree86/include/X11
++
++/usr/include
++/usr/local/include
++/usr/unsupported/include
++/usr/athena/include
++/usr/local/x11r5/include
++/usr/lpp/Xamples/include
++
++/usr/openwin/include
++/usr/openwin/share/include'
++
++if test "$ac_x_includes" = no; then
++ # Guess where to find include files, by looking for Xlib.h.
++ # First, try using that file with no special directory specified.
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++@%:@include <X11/Xlib.h>
++_ACEOF
++if ac_fn_c_try_cpp "$LINENO"; then :
++ # We can compile using X headers with no special include directory.
++ac_x_includes=
++else
++ for ac_dir in $ac_x_header_dirs; do
++ if test -r "$ac_dir/X11/Xlib.h"; then
++ ac_x_includes=$ac_dir
++ break
++ fi
++done
++fi
++rm -f conftest.err conftest.$ac_ext
++fi # $ac_x_includes = no
++
++if test "$ac_x_libraries" = no; then
++ # Check for the libraries.
++ # See if we find them without any special options.
++ # Don't add to $LIBS permanently.
++ ac_save_LIBS=$LIBS
++ LIBS="-lX11 $LIBS"
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++@%:@include <X11/Xlib.h>
++int
++main ()
++{
++XrmInitialize ()
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_link "$LINENO"; then :
++ LIBS=$ac_save_LIBS
++# We can link X programs with no special library path.
++ac_x_libraries=
++else
++ LIBS=$ac_save_LIBS
++for ac_dir in `$as_echo "$ac_x_includes $ac_x_header_dirs" | sed s/include/lib/g`
++do
++ # Don't even attempt the hair of trying to link an X program!
++ for ac_extension in a so sl dylib la dll; do
++ if test -r "$ac_dir/libX11.$ac_extension"; then
++ ac_x_libraries=$ac_dir
++ break 2
++ fi
++ done
++done
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext conftest.$ac_ext
++fi # $ac_x_libraries = no
++
++case $ac_x_includes,$ac_x_libraries in #(
++ no,* | *,no | *\'*)
++ # Didn't find X, or a directory has "'" in its name.
++ ac_cv_have_x="have_x=no";; #(
++ *)
++ # Record where we found X for the cache.
++ ac_cv_have_x="have_x=yes\
++ ac_x_includes='$ac_x_includes'\
++ ac_x_libraries='$ac_x_libraries'"
++esac
++fi
++;; #(
++ *) have_x=yes;;
++ esac
++ eval "$ac_cv_have_x"
++fi # $with_x != no
++
++if test "$have_x" != yes; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $have_x" >&5
++$as_echo "$have_x" >&6; }
++ no_x=yes
++else
++ # If each of the values was on the command line, it overrides each guess.
++ test "x$x_includes" = xNONE && x_includes=$ac_x_includes
++ test "x$x_libraries" = xNONE && x_libraries=$ac_x_libraries
++ # Update the cache value to reflect the command line values.
++ ac_cv_have_x="have_x=yes\
++ ac_x_includes='$x_includes'\
++ ac_x_libraries='$x_libraries'"
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: libraries $x_libraries, headers $x_includes" >&5
++$as_echo "libraries $x_libraries, headers $x_includes" >&6; }
++fi
++
++if test "$no_x" = yes; then
++ # Not all programs may use this symbol, but it does not hurt to define it.
++
++$as_echo "@%:@define X_DISPLAY_MISSING 1" >>confdefs.h
++
++ X_CFLAGS= X_PRE_LIBS= X_LIBS= X_EXTRA_LIBS=
++else
++ if test -n "$x_includes"; then
++ X_CFLAGS="$X_CFLAGS -I$x_includes"
++ fi
++
++ # It would also be nice to do this for all -L options, not just this one.
++ if test -n "$x_libraries"; then
++ X_LIBS="$X_LIBS -L$x_libraries"
++ # For Solaris; some versions of Sun CC require a space after -R and
++ # others require no space. Words are not sufficient . . . .
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking whether -R must be followed by a space" >&5
++$as_echo_n "checking whether -R must be followed by a space... " >&6; }
++ ac_xsave_LIBS=$LIBS; LIBS="$LIBS -R$x_libraries"
++ ac_xsave_c_werror_flag=$ac_c_werror_flag
++ ac_c_werror_flag=yes
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++int
++main ()
++{
++
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_link "$LINENO"; then :
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++ X_LIBS="$X_LIBS -R$x_libraries"
++else
++ LIBS="$ac_xsave_LIBS -R $x_libraries"
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++int
++main ()
++{
++
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_link "$LINENO"; then :
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
++$as_echo "yes" >&6; }
++ X_LIBS="$X_LIBS -R $x_libraries"
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: neither works" >&5
++$as_echo "neither works" >&6; }
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext conftest.$ac_ext
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext conftest.$ac_ext
++ ac_c_werror_flag=$ac_xsave_c_werror_flag
++ LIBS=$ac_xsave_LIBS
++ fi
++
++ # Check for system-dependent libraries X programs must link with.
++ # Do this before checking for the system-independent R6 libraries
++ # (-lICE), since we may need -lsocket or whatever for X linking.
++
++ if test "$ISC" = yes; then
++ X_EXTRA_LIBS="$X_EXTRA_LIBS -lnsl_s -linet"
++ else
++ # Martyn Johnson says this is needed for Ultrix, if the X
++ # libraries were built with DECnet support. And Karl Berry says
++ # the Alpha needs dnet_stub (dnet does not exist).
++ ac_xsave_LIBS="$LIBS"; LIBS="$LIBS $X_LIBS -lX11"
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++/* Override any GCC internal prototype to avoid an error.
++ Use char because int might match the return type of a GCC
++ builtin and then its argument prototype would still apply. */
++#ifdef __cplusplus
++extern "C"
++#endif
++char XOpenDisplay ();
++int
++main ()
++{
++return XOpenDisplay ();
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_link "$LINENO"; then :
++
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for dnet_ntoa in -ldnet" >&5
++$as_echo_n "checking for dnet_ntoa in -ldnet... " >&6; }
++if test "${ac_cv_lib_dnet_dnet_ntoa+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ ac_check_lib_save_LIBS=$LIBS
++LIBS="-ldnet $LIBS"
++cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++/* Override any GCC internal prototype to avoid an error.
++ Use char because int might match the return type of a GCC
++ builtin and then its argument prototype would still apply. */
++#ifdef __cplusplus
++extern "C"
++#endif
++char dnet_ntoa ();
++int
++main ()
++{
++return dnet_ntoa ();
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_link "$LINENO"; then :
++ ac_cv_lib_dnet_dnet_ntoa=yes
++else
++ ac_cv_lib_dnet_dnet_ntoa=no
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext conftest.$ac_ext
++LIBS=$ac_check_lib_save_LIBS
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_dnet_dnet_ntoa" >&5
++$as_echo "$ac_cv_lib_dnet_dnet_ntoa" >&6; }
++if test "x$ac_cv_lib_dnet_dnet_ntoa" = x""yes; then :
++ X_EXTRA_LIBS="$X_EXTRA_LIBS -ldnet"
++fi
++
++ if test $ac_cv_lib_dnet_dnet_ntoa = no; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for dnet_ntoa in -ldnet_stub" >&5
++$as_echo_n "checking for dnet_ntoa in -ldnet_stub... " >&6; }
++if test "${ac_cv_lib_dnet_stub_dnet_ntoa+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ ac_check_lib_save_LIBS=$LIBS
++LIBS="-ldnet_stub $LIBS"
++cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++/* Override any GCC internal prototype to avoid an error.
++ Use char because int might match the return type of a GCC
++ builtin and then its argument prototype would still apply. */
++#ifdef __cplusplus
++extern "C"
++#endif
++char dnet_ntoa ();
++int
++main ()
++{
++return dnet_ntoa ();
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_link "$LINENO"; then :
++ ac_cv_lib_dnet_stub_dnet_ntoa=yes
++else
++ ac_cv_lib_dnet_stub_dnet_ntoa=no
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext conftest.$ac_ext
++LIBS=$ac_check_lib_save_LIBS
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_dnet_stub_dnet_ntoa" >&5
++$as_echo "$ac_cv_lib_dnet_stub_dnet_ntoa" >&6; }
++if test "x$ac_cv_lib_dnet_stub_dnet_ntoa" = x""yes; then :
++ X_EXTRA_LIBS="$X_EXTRA_LIBS -ldnet_stub"
++fi
++
++ fi
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext conftest.$ac_ext
++ LIBS="$ac_xsave_LIBS"
++
++ # msh at cis.ufl.edu says -lnsl (and -lsocket) are needed for his 386/AT,
++ # to get the SysV transport functions.
++ # Chad R. Larson says the Pyramis MIS-ES running DC/OSx (SVR4)
++ # needs -lnsl.
++ # The nsl library prevents programs from opening the X display
++ # on Irix 5.2, according to T.E. Dickey.
++ # The functions gethostbyname, getservbyname, and inet_addr are
++ # in -lbsd on LynxOS 3.0.1/i386, according to Lars Hecking.
++ ac_fn_c_check_func "$LINENO" "gethostbyname" "ac_cv_func_gethostbyname"
++if test "x$ac_cv_func_gethostbyname" = x""yes; then :
++
++fi
++
++ if test $ac_cv_func_gethostbyname = no; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for gethostbyname in -lnsl" >&5
++$as_echo_n "checking for gethostbyname in -lnsl... " >&6; }
++if test "${ac_cv_lib_nsl_gethostbyname+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ ac_check_lib_save_LIBS=$LIBS
++LIBS="-lnsl $LIBS"
++cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++/* Override any GCC internal prototype to avoid an error.
++ Use char because int might match the return type of a GCC
++ builtin and then its argument prototype would still apply. */
++#ifdef __cplusplus
++extern "C"
++#endif
++char gethostbyname ();
++int
++main ()
++{
++return gethostbyname ();
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_link "$LINENO"; then :
++ ac_cv_lib_nsl_gethostbyname=yes
++else
++ ac_cv_lib_nsl_gethostbyname=no
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext conftest.$ac_ext
++LIBS=$ac_check_lib_save_LIBS
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_nsl_gethostbyname" >&5
++$as_echo "$ac_cv_lib_nsl_gethostbyname" >&6; }
++if test "x$ac_cv_lib_nsl_gethostbyname" = x""yes; then :
++ X_EXTRA_LIBS="$X_EXTRA_LIBS -lnsl"
++fi
++
++ if test $ac_cv_lib_nsl_gethostbyname = no; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for gethostbyname in -lbsd" >&5
++$as_echo_n "checking for gethostbyname in -lbsd... " >&6; }
++if test "${ac_cv_lib_bsd_gethostbyname+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ ac_check_lib_save_LIBS=$LIBS
++LIBS="-lbsd $LIBS"
++cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++/* Override any GCC internal prototype to avoid an error.
++ Use char because int might match the return type of a GCC
++ builtin and then its argument prototype would still apply. */
++#ifdef __cplusplus
++extern "C"
++#endif
++char gethostbyname ();
++int
++main ()
++{
++return gethostbyname ();
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_link "$LINENO"; then :
++ ac_cv_lib_bsd_gethostbyname=yes
++else
++ ac_cv_lib_bsd_gethostbyname=no
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext conftest.$ac_ext
++LIBS=$ac_check_lib_save_LIBS
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_bsd_gethostbyname" >&5
++$as_echo "$ac_cv_lib_bsd_gethostbyname" >&6; }
++if test "x$ac_cv_lib_bsd_gethostbyname" = x""yes; then :
++ X_EXTRA_LIBS="$X_EXTRA_LIBS -lbsd"
++fi
++
++ fi
++ fi
++
++ # lieder at skyler.mavd.honeywell.com says without -lsocket,
++ # socket/setsockopt and other routines are undefined under SCO ODT
++ # 2.0. But -lsocket is broken on IRIX 5.2 (and is not necessary
++ # on later versions), says Simon Leinen: it contains gethostby*
++ # variants that don't use the name server (or something). -lsocket
++ # must be given before -lnsl if both are needed. We assume that
++ # if connect needs -lnsl, so does gethostbyname.
++ ac_fn_c_check_func "$LINENO" "connect" "ac_cv_func_connect"
++if test "x$ac_cv_func_connect" = x""yes; then :
++
++fi
++
++ if test $ac_cv_func_connect = no; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for connect in -lsocket" >&5
++$as_echo_n "checking for connect in -lsocket... " >&6; }
++if test "${ac_cv_lib_socket_connect+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ ac_check_lib_save_LIBS=$LIBS
++LIBS="-lsocket $X_EXTRA_LIBS $LIBS"
++cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++/* Override any GCC internal prototype to avoid an error.
++ Use char because int might match the return type of a GCC
++ builtin and then its argument prototype would still apply. */
++#ifdef __cplusplus
++extern "C"
++#endif
++char connect ();
++int
++main ()
++{
++return connect ();
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_link "$LINENO"; then :
++ ac_cv_lib_socket_connect=yes
++else
++ ac_cv_lib_socket_connect=no
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext conftest.$ac_ext
++LIBS=$ac_check_lib_save_LIBS
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_socket_connect" >&5
++$as_echo "$ac_cv_lib_socket_connect" >&6; }
++if test "x$ac_cv_lib_socket_connect" = x""yes; then :
++ X_EXTRA_LIBS="-lsocket $X_EXTRA_LIBS"
++fi
++
++ fi
++
++ # Guillermo Gomez says -lposix is necessary on A/UX.
++ ac_fn_c_check_func "$LINENO" "remove" "ac_cv_func_remove"
++if test "x$ac_cv_func_remove" = x""yes; then :
++
++fi
++
++ if test $ac_cv_func_remove = no; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for remove in -lposix" >&5
++$as_echo_n "checking for remove in -lposix... " >&6; }
++if test "${ac_cv_lib_posix_remove+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ ac_check_lib_save_LIBS=$LIBS
++LIBS="-lposix $LIBS"
++cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++/* Override any GCC internal prototype to avoid an error.
++ Use char because int might match the return type of a GCC
++ builtin and then its argument prototype would still apply. */
++#ifdef __cplusplus
++extern "C"
++#endif
++char remove ();
++int
++main ()
++{
++return remove ();
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_link "$LINENO"; then :
++ ac_cv_lib_posix_remove=yes
++else
++ ac_cv_lib_posix_remove=no
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext conftest.$ac_ext
++LIBS=$ac_check_lib_save_LIBS
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_posix_remove" >&5
++$as_echo "$ac_cv_lib_posix_remove" >&6; }
++if test "x$ac_cv_lib_posix_remove" = x""yes; then :
++ X_EXTRA_LIBS="$X_EXTRA_LIBS -lposix"
++fi
++
++ fi
++
++ # BSDI BSD/OS 2.1 needs -lipc for XOpenDisplay.
++ ac_fn_c_check_func "$LINENO" "shmat" "ac_cv_func_shmat"
++if test "x$ac_cv_func_shmat" = x""yes; then :
++
++fi
++
++ if test $ac_cv_func_shmat = no; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for shmat in -lipc" >&5
++$as_echo_n "checking for shmat in -lipc... " >&6; }
++if test "${ac_cv_lib_ipc_shmat+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ ac_check_lib_save_LIBS=$LIBS
++LIBS="-lipc $LIBS"
++cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++/* Override any GCC internal prototype to avoid an error.
++ Use char because int might match the return type of a GCC
++ builtin and then its argument prototype would still apply. */
++#ifdef __cplusplus
++extern "C"
++#endif
++char shmat ();
++int
++main ()
++{
++return shmat ();
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_link "$LINENO"; then :
++ ac_cv_lib_ipc_shmat=yes
++else
++ ac_cv_lib_ipc_shmat=no
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext conftest.$ac_ext
++LIBS=$ac_check_lib_save_LIBS
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_ipc_shmat" >&5
++$as_echo "$ac_cv_lib_ipc_shmat" >&6; }
++if test "x$ac_cv_lib_ipc_shmat" = x""yes; then :
++ X_EXTRA_LIBS="$X_EXTRA_LIBS -lipc"
++fi
++
++ fi
++ fi
++
++ # Check for libraries that X11R6 Xt/Xaw programs need.
++ ac_save_LDFLAGS=$LDFLAGS
++ test -n "$x_libraries" && LDFLAGS="$LDFLAGS -L$x_libraries"
++ # SM needs ICE to (dynamically) link under SunOS 4.x (so we have to
++ # check for ICE first), but we must link in the order -lSM -lICE or
++ # we get undefined symbols. So assume we have SM if we have ICE.
++ # These have to be linked with before -lX11, unlike the other
++ # libraries we check for below, so use a different variable.
++ # John Interrante, Karl Berry
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for IceConnectionNumber in -lICE" >&5
++$as_echo_n "checking for IceConnectionNumber in -lICE... " >&6; }
++if test "${ac_cv_lib_ICE_IceConnectionNumber+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ ac_check_lib_save_LIBS=$LIBS
++LIBS="-lICE $X_EXTRA_LIBS $LIBS"
++cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++/* Override any GCC internal prototype to avoid an error.
++ Use char because int might match the return type of a GCC
++ builtin and then its argument prototype would still apply. */
++#ifdef __cplusplus
++extern "C"
++#endif
++char IceConnectionNumber ();
++int
++main ()
++{
++return IceConnectionNumber ();
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_link "$LINENO"; then :
++ ac_cv_lib_ICE_IceConnectionNumber=yes
++else
++ ac_cv_lib_ICE_IceConnectionNumber=no
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext conftest.$ac_ext
++LIBS=$ac_check_lib_save_LIBS
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_ICE_IceConnectionNumber" >&5
++$as_echo "$ac_cv_lib_ICE_IceConnectionNumber" >&6; }
++if test "x$ac_cv_lib_ICE_IceConnectionNumber" = x""yes; then :
++ X_PRE_LIBS="$X_PRE_LIBS -lSM -lICE"
++fi
++
++ LDFLAGS=$ac_save_LDFLAGS
++
++fi
++
++ac_header_dirent=no
++for ac_hdr in dirent.h sys/ndir.h sys/dir.h ndir.h; do
++ as_ac_Header=`$as_echo "ac_cv_header_dirent_$ac_hdr" | $as_tr_sh`
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_hdr that defines DIR" >&5
++$as_echo_n "checking for $ac_hdr that defines DIR... " >&6; }
++if { as_var=$as_ac_Header; eval "test \"\${$as_var+set}\" = set"; }; then :
++ $as_echo_n "(cached) " >&6
++else
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++#include <sys/types.h>
++#include <$ac_hdr>
++
++int
++main ()
++{
++if ((DIR *) 0)
++return 0;
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_compile "$LINENO"; then :
++ eval "$as_ac_Header=yes"
++else
++ eval "$as_ac_Header=no"
++fi
++rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
++fi
++eval ac_res=\$$as_ac_Header
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_res" >&5
++$as_echo "$ac_res" >&6; }
++eval as_val=\$$as_ac_Header
++ if test "x$as_val" = x""yes; then :
++ cat >>confdefs.h <<_ACEOF
++@%:@define `$as_echo "HAVE_$ac_hdr" | $as_tr_cpp` 1
++_ACEOF
++
++ac_header_dirent=$ac_hdr; break
++fi
++
++done
++# Two versions of opendir et al. are in -ldir and -lx on SCO Xenix.
++if test $ac_header_dirent = dirent.h; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for library containing opendir" >&5
++$as_echo_n "checking for library containing opendir... " >&6; }
++if test "${ac_cv_search_opendir+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ ac_func_search_save_LIBS=$LIBS
++cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++/* Override any GCC internal prototype to avoid an error.
++ Use char because int might match the return type of a GCC
++ builtin and then its argument prototype would still apply. */
++#ifdef __cplusplus
++extern "C"
++#endif
++char opendir ();
++int
++main ()
++{
++return opendir ();
++ ;
++ return 0;
++}
++_ACEOF
++for ac_lib in '' dir; do
++ if test -z "$ac_lib"; then
++ ac_res="none required"
++ else
++ ac_res=-l$ac_lib
++ LIBS="-l$ac_lib $ac_func_search_save_LIBS"
++ fi
++ if ac_fn_c_try_link "$LINENO"; then :
++ ac_cv_search_opendir=$ac_res
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext
++ if test "${ac_cv_search_opendir+set}" = set; then :
++ break
++fi
++done
++if test "${ac_cv_search_opendir+set}" = set; then :
++
++else
++ ac_cv_search_opendir=no
++fi
++rm conftest.$ac_ext
++LIBS=$ac_func_search_save_LIBS
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_search_opendir" >&5
++$as_echo "$ac_cv_search_opendir" >&6; }
++ac_res=$ac_cv_search_opendir
++if test "$ac_res" != no; then :
++ test "$ac_res" = "none required" || LIBS="$ac_res $LIBS"
++
++fi
++
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for library containing opendir" >&5
++$as_echo_n "checking for library containing opendir... " >&6; }
++if test "${ac_cv_search_opendir+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ ac_func_search_save_LIBS=$LIBS
++cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++/* Override any GCC internal prototype to avoid an error.
++ Use char because int might match the return type of a GCC
++ builtin and then its argument prototype would still apply. */
++#ifdef __cplusplus
++extern "C"
++#endif
++char opendir ();
++int
++main ()
++{
++return opendir ();
++ ;
++ return 0;
++}
++_ACEOF
++for ac_lib in '' x; do
++ if test -z "$ac_lib"; then
++ ac_res="none required"
++ else
++ ac_res=-l$ac_lib
++ LIBS="-l$ac_lib $ac_func_search_save_LIBS"
++ fi
++ if ac_fn_c_try_link "$LINENO"; then :
++ ac_cv_search_opendir=$ac_res
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext
++ if test "${ac_cv_search_opendir+set}" = set; then :
++ break
++fi
++done
++if test "${ac_cv_search_opendir+set}" = set; then :
++
++else
++ ac_cv_search_opendir=no
++fi
++rm conftest.$ac_ext
++LIBS=$ac_func_search_save_LIBS
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_search_opendir" >&5
++$as_echo "$ac_cv_search_opendir" >&6; }
++ac_res=$ac_cv_search_opendir
++if test "$ac_res" != no; then :
++ test "$ac_res" = "none required" || LIBS="$ac_res $LIBS"
++
++fi
++
++fi
++
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for ANSI C header files" >&5
++$as_echo_n "checking for ANSI C header files... " >&6; }
++if test "${ac_cv_header_stdc+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++#include <stdlib.h>
++#include <stdarg.h>
++#include <string.h>
++#include <float.h>
++
++int
++main ()
++{
++
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_compile "$LINENO"; then :
++ ac_cv_header_stdc=yes
++else
++ ac_cv_header_stdc=no
++fi
++rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
++
++if test $ac_cv_header_stdc = yes; then
++ # SunOS 4.x string.h does not declare mem*, contrary to ANSI.
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++#include <string.h>
++
++_ACEOF
++if (eval "$ac_cpp conftest.$ac_ext") 2>&5 |
++ $EGREP "memchr" >/dev/null 2>&1; then :
++
++else
++ ac_cv_header_stdc=no
++fi
++rm -f conftest*
++
++fi
++
++if test $ac_cv_header_stdc = yes; then
++ # ISC 2.0.2 stdlib.h does not declare free, contrary to ANSI.
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++#include <stdlib.h>
++
++_ACEOF
++if (eval "$ac_cpp conftest.$ac_ext") 2>&5 |
++ $EGREP "free" >/dev/null 2>&1; then :
++
++else
++ ac_cv_header_stdc=no
++fi
++rm -f conftest*
++
++fi
++
++if test $ac_cv_header_stdc = yes; then
++ # /bin/cc in Irix-4.0.5 gets non-ANSI ctype macros unless using -ansi.
++ if test "$cross_compiling" = yes; then :
++ :
++else
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++#include <ctype.h>
++#include <stdlib.h>
++#if ((' ' & 0x0FF) == 0x020)
++# define ISLOWER(c) ('a' <= (c) && (c) <= 'z')
++# define TOUPPER(c) (ISLOWER(c) ? 'A' + ((c) - 'a') : (c))
++#else
++# define ISLOWER(c) \
++ (('a' <= (c) && (c) <= 'i') \
++ || ('j' <= (c) && (c) <= 'r') \
++ || ('s' <= (c) && (c) <= 'z'))
++# define TOUPPER(c) (ISLOWER(c) ? ((c) | 0x40) : (c))
++#endif
++
++#define XOR(e, f) (((e) && !(f)) || (!(e) && (f)))
++int
++main ()
++{
++ int i;
++ for (i = 0; i < 256; i++)
++ if (XOR (islower (i), ISLOWER (i))
++ || toupper (i) != TOUPPER (i))
++ return 2;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_run "$LINENO"; then :
++
++else
++ ac_cv_header_stdc=no
++fi
++rm -f core *.core core.conftest.* gmon.out bb.out conftest$ac_exeext \
++ conftest.$ac_objext conftest.beam conftest.$ac_ext
++fi
++
++fi
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_header_stdc" >&5
++$as_echo "$ac_cv_header_stdc" >&6; }
++if test $ac_cv_header_stdc = yes; then
++
++$as_echo "@%:@define STDC_HEADERS 1" >>confdefs.h
++
++fi
++
++
++for ac_header in unistd.h TargetConfig.h
++do :
++ as_ac_Header=`$as_echo "ac_cv_header_$ac_header" | $as_tr_sh`
++ac_fn_c_check_header_mongrel "$LINENO" "$ac_header" "$as_ac_Header" "$ac_includes_default"
++eval as_val=\$$as_ac_Header
++ if test "x$as_val" = x""yes; then :
++ cat >>confdefs.h <<_ACEOF
++@%:@define `$as_echo "HAVE_$ac_header" | $as_tr_cpp` 1
++_ACEOF
++
++fi
++
++done
++
++#as# AC_CHECK_HEADERS([arpa/inet.h fcntl.h float.h limits.h \
++#as# malloc.h memory.h netdb.h netinet/in.h \
++#as# shadow.h stddef.h stdint.h stdlib.h string.h strings.h \
++#as# sys/file.h sys/ioctl.h sys/param.h sys/socket.h sys/time.h \
++#as# termios.h unistd.h])
++
++# Checks for typedefs, structures, and compiler characteristics.
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for an ANSI C-conforming const" >&5
++$as_echo_n "checking for an ANSI C-conforming const... " >&6; }
++if test "${ac_cv_c_const+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++int
++main ()
++{
++/* FIXME: Include the comments suggested by Paul. */
++#ifndef __cplusplus
++ /* Ultrix mips cc rejects this. */
++ typedef int charset[2];
++ const charset cs;
++ /* SunOS 4.1.1 cc rejects this. */
++ char const *const *pcpcc;
++ char **ppc;
++ /* NEC SVR4.0.2 mips cc rejects this. */
++ struct point {int x, y;};
++ static struct point const zero = {0,0};
++ /* AIX XL C 1.02.0.0 rejects this.
++ It does not let you subtract one const X* pointer from another in
++ an arm of an if-expression whose if-part is not a constant
++ expression */
++ const char *g = "string";
++ pcpcc = &g + (g ? g-g : 0);
++ /* HPUX 7.0 cc rejects these. */
++ ++pcpcc;
++ ppc = (char**) pcpcc;
++ pcpcc = (char const *const *) ppc;
++ { /* SCO 3.2v4 cc rejects this. */
++ char *t;
++ char const *s = 0 ? (char *) 0 : (char const *) 0;
++
++ *t++ = 0;
++ if (s) return 0;
++ }
++ { /* Someone thinks the Sun supposedly-ANSI compiler will reject this. */
++ int x[] = {25, 17};
++ const int *foo = &x[0];
++ ++foo;
++ }
++ { /* Sun SC1.0 ANSI compiler rejects this -- but not the above. */
++ typedef const int *iptr;
++ iptr p = 0;
++ ++p;
++ }
++ { /* AIX XL C 1.02.0.0 rejects this saying
++ "k.c", line 2.27: 1506-025 (S) Operand must be a modifiable lvalue. */
++ struct s { int j; const int *ap[3]; };
++ struct s *b; b->j = 5;
++ }
++ { /* ULTRIX-32 V3.1 (Rev 9) vcc rejects this */
++ const int foo = 10;
++ if (!foo) return 0;
++ }
++ return !cs[0] && !zero.x;
++#endif
++
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_compile "$LINENO"; then :
++ ac_cv_c_const=yes
++else
++ ac_cv_c_const=no
++fi
++rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_c_const" >&5
++$as_echo "$ac_cv_c_const" >&6; }
++if test $ac_cv_c_const = no; then
++
++$as_echo "@%:@define const /**/" >>confdefs.h
++
++fi
++
++#as# AC_HEADER_STDBOOL
++#as# AC_TYPE_UID_T
++#as# AC_C_INLINE
++#as# AC_TYPE_INT32_T
++ac_fn_c_check_type "$LINENO" "pid_t" "ac_cv_type_pid_t" "$ac_includes_default"
++if test "x$ac_cv_type_pid_t" = x""yes; then :
++
++else
++
++cat >>confdefs.h <<_ACEOF
++@%:@define pid_t int
++_ACEOF
++
++fi
++
++ac_fn_c_check_type "$LINENO" "size_t" "ac_cv_type_size_t" "$ac_includes_default"
++if test "x$ac_cv_type_size_t" = x""yes; then :
++
++else
++
++cat >>confdefs.h <<_ACEOF
++@%:@define size_t unsigned int
++_ACEOF
++
++fi
++
++#as# AC_STRUCT_TIMEZONE
++#as# AC_TYPE_UINT32_T
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking whether struct tm is in sys/time.h or time.h" >&5
++$as_echo_n "checking whether struct tm is in sys/time.h or time.h... " >&6; }
++if test "${ac_cv_struct_tm+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++#include <sys/types.h>
++#include <time.h>
++
++int
++main ()
++{
++struct tm tm;
++ int *p = &tm.tm_sec;
++ return !p;
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_compile "$LINENO"; then :
++ ac_cv_struct_tm=time.h
++else
++ ac_cv_struct_tm=sys/time.h
++fi
++rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_struct_tm" >&5
++$as_echo "$ac_cv_struct_tm" >&6; }
++if test $ac_cv_struct_tm = sys/time.h; then
++
++$as_echo "@%:@define TM_IN_SYS_TIME 1" >>confdefs.h
++
++fi
++
++
++#as# AC_CHECK_TYPES([ptrdiff_t])
++
++
++
++#AC_FUNC_ERROR_AT_LINE
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking whether getpgrp requires zero arguments" >&5
++$as_echo_n "checking whether getpgrp requires zero arguments... " >&6; }
++if test "${ac_cv_func_getpgrp_void+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ # Use it with a single arg.
++cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++$ac_includes_default
++int
++main ()
++{
++getpgrp (0);
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_compile "$LINENO"; then :
++ ac_cv_func_getpgrp_void=no
++else
++ ac_cv_func_getpgrp_void=yes
++fi
++rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
++
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_func_getpgrp_void" >&5
++$as_echo "$ac_cv_func_getpgrp_void" >&6; }
++if test $ac_cv_func_getpgrp_void = yes; then
++
++$as_echo "@%:@define GETPGRP_VOID 1" >>confdefs.h
++
++fi
++
++for ac_func in strftime
++do :
++ ac_fn_c_check_func "$LINENO" "strftime" "ac_cv_func_strftime"
++if test "x$ac_cv_func_strftime" = x""yes; then :
++ cat >>confdefs.h <<_ACEOF
++@%:@define HAVE_STRFTIME 1
++_ACEOF
++
++else
++ # strftime is in -lintl on SCO UNIX.
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for strftime in -lintl" >&5
++$as_echo_n "checking for strftime in -lintl... " >&6; }
++if test "${ac_cv_lib_intl_strftime+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ ac_check_lib_save_LIBS=$LIBS
++LIBS="-lintl $LIBS"
++cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++/* Override any GCC internal prototype to avoid an error.
++ Use char because int might match the return type of a GCC
++ builtin and then its argument prototype would still apply. */
++#ifdef __cplusplus
++extern "C"
++#endif
++char strftime ();
++int
++main ()
++{
++return strftime ();
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_link "$LINENO"; then :
++ ac_cv_lib_intl_strftime=yes
++else
++ ac_cv_lib_intl_strftime=no
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext conftest.$ac_ext
++LIBS=$ac_check_lib_save_LIBS
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_intl_strftime" >&5
++$as_echo "$ac_cv_lib_intl_strftime" >&6; }
++if test "x$ac_cv_lib_intl_strftime" = x""yes; then :
++ $as_echo "@%:@define HAVE_STRFTIME 1" >>confdefs.h
++
++LIBS="-lintl $LIBS"
++fi
++
++fi
++done
++
++for ac_header in vfork.h
++do :
++ ac_fn_c_check_header_mongrel "$LINENO" "vfork.h" "ac_cv_header_vfork_h" "$ac_includes_default"
++if test "x$ac_cv_header_vfork_h" = x""yes; then :
++ cat >>confdefs.h <<_ACEOF
++@%:@define HAVE_VFORK_H 1
++_ACEOF
++
++fi
++
++done
++
++for ac_func in fork vfork
++do :
++ as_ac_var=`$as_echo "ac_cv_func_$ac_func" | $as_tr_sh`
++ac_fn_c_check_func "$LINENO" "$ac_func" "$as_ac_var"
++eval as_val=\$$as_ac_var
++ if test "x$as_val" = x""yes; then :
++ cat >>confdefs.h <<_ACEOF
++@%:@define `$as_echo "HAVE_$ac_func" | $as_tr_cpp` 1
++_ACEOF
++
++fi
++done
++
++if test "x$ac_cv_func_fork" = xyes; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for working fork" >&5
++$as_echo_n "checking for working fork... " >&6; }
++if test "${ac_cv_func_fork_works+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test "$cross_compiling" = yes; then :
++ ac_cv_func_fork_works=cross
++else
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++$ac_includes_default
++int
++main ()
++{
++
++ /* By Ruediger Kuhlmann. */
++ return fork () < 0;
++
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_run "$LINENO"; then :
++ ac_cv_func_fork_works=yes
++else
++ ac_cv_func_fork_works=no
++fi
++rm -f core *.core core.conftest.* gmon.out bb.out conftest$ac_exeext \
++ conftest.$ac_objext conftest.beam conftest.$ac_ext
++fi
++
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_func_fork_works" >&5
++$as_echo "$ac_cv_func_fork_works" >&6; }
++
++else
++ ac_cv_func_fork_works=$ac_cv_func_fork
++fi
++if test "x$ac_cv_func_fork_works" = xcross; then
++ case $host in
++ *-*-amigaos* | *-*-msdosdjgpp*)
++ # Override, as these systems have only a dummy fork() stub
++ ac_cv_func_fork_works=no
++ ;;
++ *)
++ ac_cv_func_fork_works=yes
++ ;;
++ esac
++ { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: result $ac_cv_func_fork_works guessed because of cross compilation" >&5
++$as_echo "$as_me: WARNING: result $ac_cv_func_fork_works guessed because of cross compilation" >&2;}
++fi
++ac_cv_func_vfork_works=$ac_cv_func_vfork
++if test "x$ac_cv_func_vfork" = xyes; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for working vfork" >&5
++$as_echo_n "checking for working vfork... " >&6; }
++if test "${ac_cv_func_vfork_works+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test "$cross_compiling" = yes; then :
++ ac_cv_func_vfork_works=cross
++else
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++/* Thanks to Paul Eggert for this test. */
++$ac_includes_default
++#include <sys/wait.h>
++#ifdef HAVE_VFORK_H
++# include <vfork.h>
++#endif
++/* On some sparc systems, changes by the child to local and incoming
++ argument registers are propagated back to the parent. The compiler
++ is told about this with #include <vfork.h>, but some compilers
++ (e.g. gcc -O) don't grok <vfork.h>. Test for this by using a
++ static variable whose address is put into a register that is
++ clobbered by the vfork. */
++static void
++#ifdef __cplusplus
++sparc_address_test (int arg)
++# else
++sparc_address_test (arg) int arg;
++#endif
++{
++ static pid_t child;
++ if (!child) {
++ child = vfork ();
++ if (child < 0) {
++ perror ("vfork");
++ _exit(2);
++ }
++ if (!child) {
++ arg = getpid();
++ write(-1, "", 0);
++ _exit (arg);
++ }
++ }
++}
++
++int
++main ()
++{
++ pid_t parent = getpid ();
++ pid_t child;
++
++ sparc_address_test (0);
++
++ child = vfork ();
++
++ if (child == 0) {
++ /* Here is another test for sparc vfork register problems. This
++ test uses lots of local variables, at least as many local
++ variables as main has allocated so far including compiler
++ temporaries. 4 locals are enough for gcc 1.40.3 on a Solaris
++ 4.1.3 sparc, but we use 8 to be safe. A buggy compiler should
++ reuse the register of parent for one of the local variables,
++ since it will think that parent can't possibly be used any more
++ in this routine. Assigning to the local variable will thus
++ munge parent in the parent process. */
++ pid_t
++ p = getpid(), p1 = getpid(), p2 = getpid(), p3 = getpid(),
++ p4 = getpid(), p5 = getpid(), p6 = getpid(), p7 = getpid();
++ /* Convince the compiler that p..p7 are live; otherwise, it might
++ use the same hardware register for all 8 local variables. */
++ if (p != p1 || p != p2 || p != p3 || p != p4
++ || p != p5 || p != p6 || p != p7)
++ _exit(1);
++
++ /* On some systems (e.g. IRIX 3.3), vfork doesn't separate parent
++ from child file descriptors. If the child closes a descriptor
++ before it execs or exits, this munges the parent's descriptor
++ as well. Test for this by closing stdout in the child. */
++ _exit(close(fileno(stdout)) != 0);
++ } else {
++ int status;
++ struct stat st;
++
++ while (wait(&status) != child)
++ ;
++ return (
++ /* Was there some problem with vforking? */
++ child < 0
++
++ /* Did the child fail? (This shouldn't happen.) */
++ || status
++
++ /* Did the vfork/compiler bug occur? */
++ || parent != getpid()
++
++ /* Did the file descriptor bug occur? */
++ || fstat(fileno(stdout), &st) != 0
++ );
++ }
++}
++_ACEOF
++if ac_fn_c_try_run "$LINENO"; then :
++ ac_cv_func_vfork_works=yes
++else
++ ac_cv_func_vfork_works=no
++fi
++rm -f core *.core core.conftest.* gmon.out bb.out conftest$ac_exeext \
++ conftest.$ac_objext conftest.beam conftest.$ac_ext
++fi
++
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_func_vfork_works" >&5
++$as_echo "$ac_cv_func_vfork_works" >&6; }
++
++fi;
++if test "x$ac_cv_func_fork_works" = xcross; then
++ ac_cv_func_vfork_works=$ac_cv_func_vfork
++ { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: result $ac_cv_func_vfork_works guessed because of cross compilation" >&5
++$as_echo "$as_me: WARNING: result $ac_cv_func_vfork_works guessed because of cross compilation" >&2;}
++fi
++
++if test "x$ac_cv_func_vfork_works" = xyes; then
++
++$as_echo "@%:@define HAVE_WORKING_VFORK 1" >>confdefs.h
++
++else
++
++$as_echo "@%:@define vfork fork" >>confdefs.h
++
++fi
++if test "x$ac_cv_func_fork_works" = xyes; then
++
++$as_echo "@%:@define HAVE_WORKING_FORK 1" >>confdefs.h
++
++fi
++
++for ac_func in vprintf
++do :
++ ac_fn_c_check_func "$LINENO" "vprintf" "ac_cv_func_vprintf"
++if test "x$ac_cv_func_vprintf" = x""yes; then :
++ cat >>confdefs.h <<_ACEOF
++@%:@define HAVE_VPRINTF 1
++_ACEOF
++
++ac_fn_c_check_func "$LINENO" "_doprnt" "ac_cv_func__doprnt"
++if test "x$ac_cv_func__doprnt" = x""yes; then :
++
++$as_echo "@%:@define HAVE_DOPRNT 1" >>confdefs.h
++
++fi
++
++fi
++done
++
++
++#as# AC_FUNC_MALLOC
++#as# AC_FUNC_MKTIME
++#as# AC_FUNC_REALLOC
++#as# AC_FUNC_STRTOD
++
++for ac_func in memmove
++do :
++ ac_fn_c_check_func "$LINENO" "memmove" "ac_cv_func_memmove"
++if test "x$ac_cv_func_memmove" = x""yes; then :
++ cat >>confdefs.h <<_ACEOF
++@%:@define HAVE_MEMMOVE 1
++_ACEOF
++
++fi
++done
++
++#as# AC_CHECK_FUNCS([alarm atexit bzero dup2 floor \
++#as# getcwd gethostbyname getspnam gettimeofday inet_ntoa \
++#as# localtime_r memmove memset mkdir modf pow regcomp rint \
++#as# select socket sqrt strchr strcspn strdup strerror strpbrk \
++#as# strrchr strspn strstr strtol])
++
++if test "${with_x}" != "no" ; then
++
++ CFLAGS="$CFLAGS $X_CFLAGS"
++if test "`uname`" != "IRIX64" && test "`uname`" != "IRIX" ; then
++ XLIB="$X_LIBS -lX11 $X_EXTRA_LIBS"
++else
++ XLIB="-lX11 $X_EXTRA_LIBS"
++fi
++
++
++ac_fn_c_check_header_mongrel "$LINENO" "X11/Xlib.h" "ac_cv_header_X11_Xlib_h" "$ac_includes_default"
++if test "x$ac_cv_header_X11_Xlib_h" = x""yes; then :
++
++ $as_echo "@%:@define PLD_xwin 1" >>confdefs.h
++
++
++else
++
++ echo ""
++ echo "X11 graphics have been selected but no X11 header files"
++ echo "have been found."
++ echo ""
++ echo "This error usually happens on Linux/MacOSX distributions"
++ echo "where the optional X11 development files have not been installed."
++ echo "On Linux RPM systems this package is usually called something"
++ echo "like xorg-x11-proto-devel whereas on Debian/Ubuntu it may"
++ echo "be called x-dev. On MacOSX installation DVDs the X11 files"
++ echo "can usually be found as an explicitly named optional"
++ echo "installation."
++ echo ""
++ echo "After installing the X11 development files you should do a"
++ echo "'make clean' and perform the configure stage again."
++ echo ""
++ echo "Alternatively, to install EMBOSS without X11 support, you can add"
++ echo "the --without-x switch to the configure command."
++ echo ""
++ exit $?
++
++fi
++
++
++
++
++fi
++
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for socket in -lc" >&5
++$as_echo_n "checking for socket in -lc... " >&6; }
++if test "${ac_cv_lib_c_socket+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ ac_check_lib_save_LIBS=$LIBS
++LIBS="-lc $LIBS"
++cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++/* Override any GCC internal prototype to avoid an error.
++ Use char because int might match the return type of a GCC
++ builtin and then its argument prototype would still apply. */
++#ifdef __cplusplus
++extern "C"
++#endif
++char socket ();
++int
++main ()
++{
++return socket ();
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_link "$LINENO"; then :
++ ac_cv_lib_c_socket=yes
++else
++ ac_cv_lib_c_socket=no
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext conftest.$ac_ext
++LIBS=$ac_check_lib_save_LIBS
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_c_socket" >&5
++$as_echo "$ac_cv_lib_c_socket" >&6; }
++if test "x$ac_cv_lib_c_socket" = x""yes; then :
++ LIBS="$LIBS"
++else
++ LIBS="$LIBS -lsocket"
++fi
++
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for main in -lm" >&5
++$as_echo_n "checking for main in -lm... " >&6; }
++if test "${ac_cv_lib_m_main+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ ac_check_lib_save_LIBS=$LIBS
++LIBS="-lm $LIBS"
++cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++
++int
++main ()
++{
++return main ();
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_link "$LINENO"; then :
++ ac_cv_lib_m_main=yes
++else
++ ac_cv_lib_m_main=no
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext conftest.$ac_ext
++LIBS=$ac_check_lib_save_LIBS
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_m_main" >&5
++$as_echo "$ac_cv_lib_m_main" >&6; }
++if test "x$ac_cv_lib_m_main" = x""yes; then :
++ cat >>confdefs.h <<_ACEOF
++@%:@define HAVE_LIBM 1
++_ACEOF
++
++ LIBS="-lm $LIBS"
++
++fi
++
++
++if test "`uname`" = "FreeBSD" && ${with_pngdriver} != "no"; then
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for main in -liconv" >&5
++$as_echo_n "checking for main in -liconv... " >&6; }
++if test "${ac_cv_lib_iconv_main+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ ac_check_lib_save_LIBS=$LIBS
++LIBS="-liconv $LIBS"
++cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++
++int
++main ()
++{
++return main ();
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_link "$LINENO"; then :
++ ac_cv_lib_iconv_main=yes
++else
++ ac_cv_lib_iconv_main=no
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext conftest.$ac_ext
++LIBS=$ac_check_lib_save_LIBS
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_iconv_main" >&5
++$as_echo "$ac_cv_lib_iconv_main" >&6; }
++if test "x$ac_cv_lib_iconv_main" = x""yes; then :
++ LIBS="$LIBS"
++else
++ LIBS="-liconv $LIBS"
++fi
++
++fi
++
++ if false; then
++ AMPNG_TRUE=
++ AMPNG_FALSE='#'
++else
++ AMPNG_TRUE='#'
++ AMPNG_FALSE=
++fi
++
++ if false; then
++ AMPDF_TRUE=
++ AMPDF_FALSE='#'
++else
++ AMPDF_TRUE='#'
++ AMPDF_FALSE=
++fi
++
++
++#
++# Handle general setup e.g. documentation directory
++#
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking if docroot is given" >&5
++$as_echo_n "checking if docroot is given... " >&6; }
++
++@%:@ Check whether --with-docroot was given.
++if test "${with_docroot+set}" = set; then :
++ withval=$with_docroot; if test "$withval" != no ; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
++$as_echo "yes" >&6; }
++ CPPFLAGS="$CPPFLAGS -DDOC_ROOT=\\\"$withval\\\""
++fi
++else
++
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++
++fi
++
++
++
++
++# GCC profiling
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking if gcc profiling is selected" >&5
++$as_echo_n "checking if gcc profiling is selected... " >&6; }
++
++@%:@ Check whether --with-gccprofile was given.
++if test "${with_gccprofile+set}" = set; then :
++ withval=$with_gccprofile; if test "$withval" != no ; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
++$as_echo "yes" >&6; }
++ CFLAGS="$CFLAGS -g -pg"
++ LDFLAGS="$LDFLAGS -pg"
++fi
++else
++
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++
++fi
++
++
++
++
++#
++# Handle user hints
++#
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking if java include directory given" >&5
++$as_echo_n "checking if java include directory given... " >&6; }
++
++@%:@ Check whether --with-java was given.
++if test "${with_java+set}" = set; then :
++ withval=$with_java; if test "$withval" != no ; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
++$as_echo "yes" >&6; }
++ JALT_HOME="$withval"
++ if test -d $withval ; then
++ echo "Java directory $withval exists"
++ else
++ echo "Java directory $withval does not exist"
++ exit 0
++ fi
++
++ JALT_HOME="${JALT_HOME} -DHAVE_JAVA"
++ # Extract the first word of "javac", so it can be a program name with args.
++set dummy javac; ac_word=$2
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
++$as_echo_n "checking for $ac_word... " >&6; }
++if test "${ac_cv_prog_havejavac+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test -n "$havejavac"; then
++ ac_cv_prog_havejavac="$havejavac" # Let the user override the test.
++else
++as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
++ ac_cv_prog_havejavac=""yes""
++ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
++ break 2
++ fi
++done
++ done
++IFS=$as_save_IFS
++
++ test -z "$ac_cv_prog_havejavac" && ac_cv_prog_havejavac=""no""
++fi
++fi
++havejavac=$ac_cv_prog_havejavac
++if test -n "$havejavac"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $havejavac" >&5
++$as_echo "$havejavac" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++
++ if test "${havejavac}" != yes ; then
++ echo "Error: Either JAVA not installed or 'javac' not in your PATH"
++ exit 1
++ fi
++ if test -f /etc/debian_release || test -f /etc/debian_version ; then
++ CFLAGS="$CFLAGS -DDEBIAN"
++ fi
++ JAVA_OK=yes
++
++else
++ JAVA_OK=no
++
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++
++fi
++else
++
++
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++
++
++fi
++
++
++if test -n "${JALT_HOME}"
++then
++ CFLAGS="$CFLAGS -I${JALT_HOME}"
++fi
++
++
++#
++# Handle user hints
++#
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking if java OS include directory given" >&5
++$as_echo_n "checking if java OS include directory given... " >&6; }
++
++@%:@ Check whether --with-javaos was given.
++if test "${with_javaos+set}" = set; then :
++ withval=$with_javaos; if test "$withval" != no ; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
++$as_echo "yes" >&6; }
++ if test -d $withval ; then
++ echo "Javaos directory $withval exists"
++ else
++ echo "Javaos directory $withval does not exist"
++ exit 0
++ fi
++ ALT_HOMEOS="$withval"
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++else
++
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++ if test "$JAVA_OK" = "yes" ; then
++ echo "Error: --with-java=dir unspecified"
++ exit 0
++ fi
++
++fi
++
++
++if test -n "${ALT_HOMEOS}"
++then
++ CFLAGS="$CFLAGS -I${ALT_HOMEOS}"
++fi
++
++
++
++#
++# Handle user hints
++#
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking whether to look for pdf support" >&5
++$as_echo_n "checking whether to look for pdf support... " >&6; }
++
++@%:@ Check whether --with-hpdf was given.
++if test "${with_hpdf+set}" = set; then :
++ withval=$with_hpdf; if test "$withval" != no ; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
++$as_echo "yes" >&6; }
++ ALT_HOME="$withval"
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++else
++
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
++$as_echo "yes" >&6; }
++ALT_HOME=/usr
++
++fi
++
++
++
++#
++# Locate hpdf
++#
++if test -d "${ALT_HOME}"
++then
++
++#
++# Keep a copy if it fails
++#
++ ALT_LDFLAGS="$LDFLAGS"
++ ALT_CPPFLAGS="$CPPFLAGS"
++
++#
++# Set
++#
++ LDFLAGS="${LDFLAGS} -L${ALT_HOME}/lib"
++ CPPFLAGS="$CPPFLAGS -I$ALT_HOME/include"
++
++#
++# Check for libharu in ALT_HOME
++#
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for HPDF_New in -lhpdf" >&5
++$as_echo_n "checking for HPDF_New in -lhpdf... " >&6; }
++if test "${ac_cv_lib_hpdf_HPDF_New+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ ac_check_lib_save_LIBS=$LIBS
++LIBS="-lhpdf -L${ALT_HOME}/lib $LIBS"
++cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++/* Override any GCC internal prototype to avoid an error.
++ Use char because int might match the return type of a GCC
++ builtin and then its argument prototype would still apply. */
++#ifdef __cplusplus
++extern "C"
++#endif
++char HPDF_New ();
++int
++main ()
++{
++return HPDF_New ();
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_link "$LINENO"; then :
++ ac_cv_lib_hpdf_HPDF_New=yes
++else
++ ac_cv_lib_hpdf_HPDF_New=no
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext conftest.$ac_ext
++LIBS=$ac_check_lib_save_LIBS
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_hpdf_HPDF_New" >&5
++$as_echo "$ac_cv_lib_hpdf_HPDF_New" >&6; }
++if test "x$ac_cv_lib_hpdf_HPDF_New" = x""yes; then :
++ CHECK=1
++else
++ CHECK=0
++fi
++
++#
++#
++# If everything found okay then proceed to include png driver in config.
++#
++ if test $CHECK = "1" ; then
++ LIBS="$LIBS -lhpdf"
++
++ if test "`uname`" = "SunOS"; then
++ LDFLAGS="$LDFLAGS -R$ALT_HOME/lib"
++ fi
++
++ $as_echo "@%:@define PLD_pdf 1" >>confdefs.h
++
++ if true; then
++ AMPDF_TRUE=
++ AMPDF_FALSE='#'
++else
++ AMPDF_TRUE='#'
++ AMPDF_FALSE=
++fi
++
++ echo PDF support found
++ if test $ALT_HOME = "/usr" ; then
++ LDFLAGS="$ALT_LDFLAGS"
++ CPPFLAGS="$ALT_CPPFLAGS"
++ fi
++ else
++#
++# If not okay then reset FLAGS.
++#
++ if false; then
++ AMPDF_TRUE=
++ AMPDF_FALSE='#'
++else
++ AMPDF_TRUE='#'
++ AMPDF_FALSE=
++fi
++
++ LDFLAGS="$ALT_LDFLAGS"
++ CPPFLAGS="$ALT_CPPFLAGS"
++ echo "No pdf support (libhpdf) found."
++ fi
++
++else
++ if test $withval != "no"; then
++ echo "Directory $ALT_HOME does not exist"
++ exit 0
++ fi
++fi
++
++
++
++
++PLPLOT_LIBS=""
++OLIBS="$LIBS"
++LIBS=""
++
++check_plplot_ok=yes
++check_plplotpkg_ok=no
++if test x = x && test x = x; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for PLPlot pkg-config info" >&5
++$as_echo_n "checking for PLPlot pkg-config info... " >&6; }
++ if pkg-config --exists plplotd; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
++$as_echo "yes" >&6; }
++ PLPLOT_CFLAGS=`pkg-config --cflags plplotd`
++ PLPLOT_LIBS=`pkg-config --libs plplotd`
++
++$as_echo "@%:@define PLPLOT_H \"plplot.h\"" >>confdefs.h
++
++
++$as_echo "@%:@define PLPLOTP_H \"plplotP.h\"" >>confdefs.h
++
++ check_plplotpkg_ok=yes
++ else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++ fi
++fi
++if test x$check_plplotpkg_ok = xno; then
++ if test x = x; then
++ ac_fn_c_check_header_mongrel "$LINENO" "plplot.h" "ac_cv_header_plplot_h" "$ac_includes_default"
++if test "x$ac_cv_header_plplot_h" = x""yes; then :
++ check_plplothead_ok=yes
++else
++ check_plplothead_ok=no
++fi
++
++
++ if test x$check_plplothead_ok = xyes; then
++
++$as_echo "@%:@define PLPLOT_H \"plplot.h\"" >>confdefs.h
++
++
++$as_echo "@%:@define PLPLOTP_H \"plplotP.h\"" >>confdefs.h
++
++ else
++ ac_fn_c_check_header_mongrel "$LINENO" "plplot/plplot.h" "ac_cv_header_plplot_plplot_h" "$ac_includes_default"
++if test "x$ac_cv_header_plplot_plplot_h" = x""yes; then :
++ check_plplothead_ok=yes
++else
++ check_plplothead_ok=no
++fi
++
++
++ if test x$check_plplothead_ok = xyes; then
++
++$as_echo "@%:@define PLPLOT_H \"plplot/plplot.h\"" >>confdefs.h
++
++
++$as_echo "@%:@define PLPLOTP_H \"plplot/plplotP.h\"" >>confdefs.h
++
++ else
++ check_plplot_ok=no
++ fi
++ fi
++ else
++ ac_fn_c_check_header_mongrel "$LINENO" "/plplot.h" "ac_cv_header__plplot_h" "$ac_includes_default"
++if test "x$ac_cv_header__plplot_h" = x""yes; then :
++ check_plplothead_ok=yes
++else
++ check_plplothead_ok=no
++fi
++
++
++ if test x$check_plplothead_ok = xyes; then
++
++$as_echo "@%:@define PLPLOT_H \"plplot.h\"" >>confdefs.h
++
++
++$as_echo "@%:@define PLPLOTP_H \"plplotP.h\"" >>confdefs.h
++
++ PLPLOT_CFLAGS="-I"
++ else
++ check_plplot_ok=no
++ fi
++ fi
++ if test x = x; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for c_plinit in -lplplotd" >&5
++$as_echo_n "checking for c_plinit in -lplplotd... " >&6; }
++if test "${ac_cv_lib_plplotd_c_plinit+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ ac_check_lib_save_LIBS=$LIBS
++LIBS="-lplplotd $LIBS"
++cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++/* Override any GCC internal prototype to avoid an error.
++ Use char because int might match the return type of a GCC
++ builtin and then its argument prototype would still apply. */
++#ifdef __cplusplus
++extern "C"
++#endif
++char c_plinit ();
++int
++main ()
++{
++return c_plinit ();
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_link "$LINENO"; then :
++ ac_cv_lib_plplotd_c_plinit=yes
++else
++ ac_cv_lib_plplotd_c_plinit=no
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext conftest.$ac_ext
++LIBS=$ac_check_lib_save_LIBS
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_plplotd_c_plinit" >&5
++$as_echo "$ac_cv_lib_plplotd_c_plinit" >&6; }
++if test "x$ac_cv_lib_plplotd_c_plinit" = x""yes; then :
++ cat >>confdefs.h <<_ACEOF
++@%:@define HAVE_LIBPLPLOTD 1
++_ACEOF
++
++ LIBS="-lplplotd $LIBS"
++
++else
++ check_plplot_ok=no
++fi
++
++ PLPLOT_LIBS="-lplplotd"
++ else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for c_plinit in -lplplotd" >&5
++$as_echo_n "checking for c_plinit in -lplplotd... " >&6; }
++if test "${ac_cv_lib_plplotd_c_plinit+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ ac_check_lib_save_LIBS=$LIBS
++LIBS="-lplplotd -L $LIBS"
++cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++/* Override any GCC internal prototype to avoid an error.
++ Use char because int might match the return type of a GCC
++ builtin and then its argument prototype would still apply. */
++#ifdef __cplusplus
++extern "C"
++#endif
++char c_plinit ();
++int
++main ()
++{
++return c_plinit ();
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_link "$LINENO"; then :
++ ac_cv_lib_plplotd_c_plinit=yes
++else
++ ac_cv_lib_plplotd_c_plinit=no
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext conftest.$ac_ext
++LIBS=$ac_check_lib_save_LIBS
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_plplotd_c_plinit" >&5
++$as_echo "$ac_cv_lib_plplotd_c_plinit" >&6; }
++if test "x$ac_cv_lib_plplotd_c_plinit" = x""yes; then :
++ cat >>confdefs.h <<_ACEOF
++@%:@define HAVE_LIBPLPLOTD 1
++_ACEOF
++
++ LIBS="-lplplotd $LIBS"
++
++else
++ check_plplot_ok=no
++fi
++
++ PLPLOT_LIBS="-L -lplplotd"
++ fi
++fi
++
++LIBS="$OLIBS"
++if test x$check_plplot_ok = xyes; then
++
++
++
++$as_echo "@%:@define HAVE_PLPLOT 1" >>confdefs.h
++
++fi
++
++
++#
++# Handle user hints
++#
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking if png driver is wanted" >&5
++$as_echo_n "checking if png driver is wanted... " >&6; }
++
++@%:@ Check whether --with-pngdriver was given.
++if test "${with_pngdriver+set}" = set; then :
++ withval=$with_pngdriver; if test "$withval" != no ; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
++$as_echo "yes" >&6; }
++ ALT_HOME="$withval"
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++else
++
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
++$as_echo "yes" >&6; }
++ALT_HOME=/usr
++
++fi
++
++
++
++#
++# Locate png/gd/zlib, if wanted
++#
++if test -d "${ALT_HOME}"
++then
++
++#
++# Keep a copy if it fails
++#
++ ALT_LDFLAGS="$LDFLAGS"
++ ALT_CPPFLAGS="$CPPFLAGS"
++
++#
++# Set
++#
++ LDFLAGS="${LDFLAGS} -L${ALT_HOME}/lib"
++ CPPFLAGS="$CPPFLAGS -I$ALT_HOME/include"
++
++ ICCHECK=0
++ if test "`uname`" = "SunOS"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for libiconv_close in -liconv" >&5
++$as_echo_n "checking for libiconv_close in -liconv... " >&6; }
++if test "${ac_cv_lib_iconv_libiconv_close+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ ac_check_lib_save_LIBS=$LIBS
++LIBS="-liconv -L${ALT_HOME}/lib -liconv $LIBS"
++cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++/* Override any GCC internal prototype to avoid an error.
++ Use char because int might match the return type of a GCC
++ builtin and then its argument prototype would still apply. */
++#ifdef __cplusplus
++extern "C"
++#endif
++char libiconv_close ();
++int
++main ()
++{
++return libiconv_close ();
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_link "$LINENO"; then :
++ ac_cv_lib_iconv_libiconv_close=yes
++else
++ ac_cv_lib_iconv_libiconv_close=no
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext conftest.$ac_ext
++LIBS=$ac_check_lib_save_LIBS
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_iconv_libiconv_close" >&5
++$as_echo "$ac_cv_lib_iconv_libiconv_close" >&6; }
++if test "x$ac_cv_lib_iconv_libiconv_close" = x""yes; then :
++ ICCHECK=1
++else
++ ICCHECK=0
++fi
++
++ if test $ICCHECK = "1" ; then
++ LDFLAGS="${LDFLAGS} -L${ALT_HOME}/lib -liconv"
++ fi
++ LDFLAGS="$LDFLAGS -R$ALT_HOME/lib"
++ fi
++
++
++
++
++
++#
++# Check for zlib in ALT_HOME
++#
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for inflateEnd in -lz" >&5
++$as_echo_n "checking for inflateEnd in -lz... " >&6; }
++if test "${ac_cv_lib_z_inflateEnd+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ ac_check_lib_save_LIBS=$LIBS
++LIBS="-lz -L${ALT_HOME}/lib -lz $LIBS"
++cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++/* Override any GCC internal prototype to avoid an error.
++ Use char because int might match the return type of a GCC
++ builtin and then its argument prototype would still apply. */
++#ifdef __cplusplus
++extern "C"
++#endif
++char inflateEnd ();
++int
++main ()
++{
++return inflateEnd ();
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_link "$LINENO"; then :
++ ac_cv_lib_z_inflateEnd=yes
++else
++ ac_cv_lib_z_inflateEnd=no
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext conftest.$ac_ext
++LIBS=$ac_check_lib_save_LIBS
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_z_inflateEnd" >&5
++$as_echo "$ac_cv_lib_z_inflateEnd" >&6; }
++if test "x$ac_cv_lib_z_inflateEnd" = x""yes; then :
++ CHECK=1
++else
++ CHECK=0
++fi
++
++#
++
++#
++# Check for png
++#
++ if test $CHECK = "1" ; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for png_destroy_read_struct in -lpng" >&5
++$as_echo_n "checking for png_destroy_read_struct in -lpng... " >&6; }
++if test "${ac_cv_lib_png_png_destroy_read_struct+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ ac_check_lib_save_LIBS=$LIBS
++LIBS="-lpng -L${ALT_HOME}/lib -lz $LIBS"
++cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++/* Override any GCC internal prototype to avoid an error.
++ Use char because int might match the return type of a GCC
++ builtin and then its argument prototype would still apply. */
++#ifdef __cplusplus
++extern "C"
++#endif
++char png_destroy_read_struct ();
++int
++main ()
++{
++return png_destroy_read_struct ();
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_link "$LINENO"; then :
++ ac_cv_lib_png_png_destroy_read_struct=yes
++else
++ ac_cv_lib_png_png_destroy_read_struct=no
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext conftest.$ac_ext
++LIBS=$ac_check_lib_save_LIBS
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_png_png_destroy_read_struct" >&5
++$as_echo "$ac_cv_lib_png_png_destroy_read_struct" >&6; }
++if test "x$ac_cv_lib_png_png_destroy_read_struct" = x""yes; then :
++ CHECK=1
++else
++ CHECK=0
++fi
++
++ fi
++
++
++
++
++#
++# Check for gd
++#
++ if test $CHECK = "1"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for gdImageCreateFromPng in -lgd" >&5
++$as_echo_n "checking for gdImageCreateFromPng in -lgd... " >&6; }
++if test "${ac_cv_lib_gd_gdImageCreateFromPng+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ ac_check_lib_save_LIBS=$LIBS
++LIBS="-lgd -L${ALT_HOME}/lib -lgd -lpng -lz -lm $LIBS"
++cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++/* Override any GCC internal prototype to avoid an error.
++ Use char because int might match the return type of a GCC
++ builtin and then its argument prototype would still apply. */
++#ifdef __cplusplus
++extern "C"
++#endif
++char gdImageCreateFromPng ();
++int
++main ()
++{
++return gdImageCreateFromPng ();
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_link "$LINENO"; then :
++ ac_cv_lib_gd_gdImageCreateFromPng=yes
++else
++ ac_cv_lib_gd_gdImageCreateFromPng=no
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext conftest.$ac_ext
++LIBS=$ac_check_lib_save_LIBS
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_gd_gdImageCreateFromPng" >&5
++$as_echo "$ac_cv_lib_gd_gdImageCreateFromPng" >&6; }
++if test "x$ac_cv_lib_gd_gdImageCreateFromPng" = x""yes; then :
++ CHECK=1
++else
++ CHECK=0
++fi
++
++ if test $CHECK = "0"; then
++ echo need to upgrade gd for png driver for plplot
++ fi
++ fi
++#
++# If everything found okay then proceed to include png driver in config.
++#
++ if test $CHECK = "1" ; then
++ LIBS="$LIBS -lgd -lpng -lz -lm"
++
++ if test $ICCHECK = "1" ; then
++ LIBS="$LIBS -liconv"
++ fi
++
++ if test "`uname`" = "SunOS"; then
++ LDFLAGS="$LDFLAGS -R$ALT_HOME/lib"
++ fi
++
++ $as_echo "@%:@define PLD_png 1" >>confdefs.h
++
++ if true; then
++ AMPNG_TRUE=
++ AMPNG_FALSE='#'
++else
++ AMPNG_TRUE='#'
++ AMPNG_FALSE=
++fi
++
++ echo PNG libraries found
++ if test $ALT_HOME = "/usr" ; then
++ LDFLAGS="$ALT_LDFLAGS"
++ CPPFLAGS="$ALT_CPPFLAGS"
++ fi
++ else
++#
++# If not okay then reset FLAGS.
++#
++ if false; then
++ AMPNG_TRUE=
++ AMPNG_FALSE='#'
++else
++ AMPNG_TRUE='#'
++ AMPNG_FALSE=
++fi
++
++ LDFLAGS="$ALT_LDFLAGS"
++ CPPFLAGS="$ALT_CPPFLAGS"
++ echo No png driver will be made due to librarys missing/old.
++ fi
++# echo PNG STUFF FOLLOWS!!!
++# echo CHECK = $CHECK
++# echo LIBS = $LIBS
++# echo LDFLAGS = $LDFLAGS
++# echo CPPFLAGS = $CPPFLAGS
++
++
++else
++ if test $withval != "no"; then
++ echo "Directory $ALT_HOME does not exist"
++ exit 0
++ fi
++fi
++
++#
++# Handle user authorisation
++#
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking if any authorisation type is given" >&5
++$as_echo_n "checking if any authorisation type is given... " >&6; }
++
++@%:@ Check whether --with-auth was given.
++if test "${with_auth+set}" = set; then :
++ withval=$with_auth; if test "$withval" != no ; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
++$as_echo "yes" >&6; }
++
++ ALT_AUTHTYPE="-D${withval}"
++
++ if test "$withval" = "yes" ; then
++ ALT_AUTHTYPE="-DPAM"
++ fi
++ if test "$withval" = "pam" ; then
++ ALT_AUTHTYPE="-DPAM"
++ fi
++ if test "$withval" = "shadow" ; then
++ ALT_AUTHTYPE="-DN_SHADOW"
++ fi
++ if test "$withval" = "rshadow" ; then
++ ALT_AUTHTYPE="-DR_SHADOW"
++ fi
++ if test "$withval" = "noshadow" ; then
++ ALT_AUTHTYPE="-DNO_SHADOW"
++ fi
++ if test "$withval" = "rnoshadow" ; then
++ ALT_AUTHTYPE="-DRNO_SHADOW"
++ fi
++ if test "$withval" = "aixshadow" ; then
++ ALT_AUTHTYPE="-DAIX_SHADOW"
++ fi
++ if test "$withval" = "hpuxshadow" ; then
++ ALT_AUTHTYPE="-DHPUX_SHADOW"
++ fi
++if test "`uname`" != "IRIX64" && test "`uname`" != "IRIX" ; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for main in -lcrypt" >&5
++$as_echo_n "checking for main in -lcrypt... " >&6; }
++if test "${ac_cv_lib_crypt_main+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ ac_check_lib_save_LIBS=$LIBS
++LIBS="-lcrypt $LIBS"
++cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++
++int
++main ()
++{
++return main ();
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_link "$LINENO"; then :
++ ac_cv_lib_crypt_main=yes
++else
++ ac_cv_lib_crypt_main=no
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext conftest.$ac_ext
++LIBS=$ac_check_lib_save_LIBS
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_crypt_main" >&5
++$as_echo "$ac_cv_lib_crypt_main" >&6; }
++if test "x$ac_cv_lib_crypt_main" = x""yes; then :
++ LDFLAGS="$LDFLAGS -lcrypt"
++else
++ LDFLAGS="$LDFLAGS"
++fi
++
++fi
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for main in -lpam" >&5
++$as_echo_n "checking for main in -lpam... " >&6; }
++if test "${ac_cv_lib_pam_main+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ ac_check_lib_save_LIBS=$LIBS
++LIBS="-lpam $LIBS"
++cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++
++int
++main ()
++{
++return main ();
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_link "$LINENO"; then :
++ ac_cv_lib_pam_main=yes
++else
++ ac_cv_lib_pam_main=no
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext conftest.$ac_ext
++LIBS=$ac_check_lib_save_LIBS
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_pam_main" >&5
++$as_echo "$ac_cv_lib_pam_main" >&6; }
++if test "x$ac_cv_lib_pam_main" = x""yes; then :
++ LDFLAGS="$LDFLAGS -lpam"
++else
++ LDFLAGS="$LDFLAGS"
++fi
++
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++else
++
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++# if test "$JAVA_OK" = "yes" ; then
++# echo "Error: --with-java=dir unspecified"
++# exit 0
++# fi
++
++fi
++
++
++if test -n "${ALT_AUTHTYPE}"
++then
++ CFLAGS="$CFLAGS ${ALT_AUTHTYPE}"
++else
++ CFLAGS="$CFLAGS -DNO_AUTH"
++fi
++
++
++
++#
++#
++#
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking if Linux x86_64" >&5
++$as_echo_n "checking if Linux x86_64... " >&6; }
++
++
++if test "`uname -a | grep Linux`"; then
++ if test "`uname -a | grep x86_64`"; then
++ CFLAGS="${CFLAGS} -D__amd64__"
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
++$as_echo "yes" >&6; }
++ else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++ fi
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++
++
++
++
++@%:@ Check whether --with-mysql was given.
++if test "${with_mysql+set}" = set; then :
++ withval=$with_mysql;
++ if test "$withval" = "no"; then
++ want_mysql="no"
++ elif test "$withval" = "yes"; then
++ want_mysql="yes"
++ else
++ want_mysql="yes"
++ MYSQL_CONFIG="$withval"
++ fi
++
++else
++ want_mysql="yes"
++
++fi
++
++
++ MYSQL_CFLAGS=""
++ MYSQL_LDFLAGS=""
++ MYSQL_VERSION=""
++
++
++ if test "$want_mysql" = "yes"; then
++
++ if test -z "$MYSQL_CONFIG" -o test; then
++ # Extract the first word of "mysql_config", so it can be a program name with args.
++set dummy mysql_config; ac_word=$2
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
++$as_echo_n "checking for $ac_word... " >&6; }
++if test "${ac_cv_path_MYSQL_CONFIG+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ case $MYSQL_CONFIG in
++ [\\/]* | ?:[\\/]*)
++ ac_cv_path_MYSQL_CONFIG="$MYSQL_CONFIG" # Let the user override the test with a path.
++ ;;
++ *)
++ as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
++ ac_cv_path_MYSQL_CONFIG="$as_dir/$ac_word$ac_exec_ext"
++ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
++ break 2
++ fi
++done
++ done
++IFS=$as_save_IFS
++
++ test -z "$ac_cv_path_MYSQL_CONFIG" && ac_cv_path_MYSQL_CONFIG="no"
++ ;;
++esac
++fi
++MYSQL_CONFIG=$ac_cv_path_MYSQL_CONFIG
++if test -n "$MYSQL_CONFIG"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $MYSQL_CONFIG" >&5
++$as_echo "$MYSQL_CONFIG" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++
++ fi
++
++ if test "$MYSQL_CONFIG" != "no"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for MySQL libraries" >&5
++$as_echo_n "checking for MySQL libraries... " >&6; }
++
++ MYSQL_CFLAGS="`$MYSQL_CONFIG --include`"
++ MYSQL_LDFLAGS="`$MYSQL_CONFIG --libs`"
++
++ MYSQL_VERSION=`$MYSQL_CONFIG --version`
++
++
++ EMBCFLAGS=$CFLAGS
++ EMBLDFLAGS=$LDFLAGS
++ CFLAGS="$MYSQL_CFLAGS $EMBCFLAGS"
++ LDFLAGS="$MYSQL_LDFLAGS $EMBLDFLAGS"
++
++ cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++#include <stdio.h>
++ #include "mysql.h"
++int
++main ()
++{
++mysql_info(NULL)
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_link "$LINENO"; then :
++ havemysql=yes
++else
++ havemysql=no
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext conftest.$ac_ext
++
++ CFLAGS=$EMBCFLAGS
++ LDFLAGS=$EMBLDFLAGS
++
++ if test "$havemysql" = yes; then
++
++$as_echo "@%:@define HAVE_MYSQL 1" >>confdefs.h
++
++ found_mysql="yes"
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
++$as_echo "yes" >&6; }
++ else
++ MYSQL_CFLAGS=""
++ MYSQL_LDFLAGS=""
++ found_mysql="no"
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++ fi
++ else
++ found_mysql="no"
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++ fi
++ fi
++
++
++
++ mysql_version_req=
++
++ if test "$found_mysql" = "yes" -a -n "$mysql_version_req"; then
++
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking if MySQL version is >= $mysql_version_req" >&5
++$as_echo_n "checking if MySQL version is >= $mysql_version_req... " >&6; }
++
++ mysql_version_req_major=`expr $mysql_version_req : '\([0-9]*\)'`
++ mysql_version_req_minor=`expr $mysql_version_req : '[0-9]*\.\([0-9]*\)'`
++ mysql_version_req_micro=`expr $mysql_version_req : '[0-9]*\.[0-9]*\.\([0-9]*\)'`
++ if test "x$mysql_version_req_micro" = "x"; then
++ mysql_version_req_micro="0"
++ fi
++
++ mysql_version_req_number=`expr $mysql_version_req_major \* 1000000 \
++ \+ $mysql_version_req_minor \* 1000 \
++ \+ $mysql_version_req_micro`
++
++ mysql_version_major=`expr $MYSQL_VERSION : '\([0-9]*\)'`
++ mysql_version_minor=`expr $MYSQL_VERSION : '[0-9]*\.\([0-9]*\)'`
++ mysql_version_micro=`expr $MYSQL_VERSION : '[0-9]*\.[0-9]*\.\([0-9]*\)'`
++ if test "x$mysql_version_micro" = "x"; then
++ mysql_version_micro="0"
++ fi
++
++ mysql_version_number=`expr $mysql_version_major \* 1000000 \
++ \+ $mysql_version_minor \* 1000 \
++ \+ $mysql_version_micro`
++
++ mysql_version_check=`expr $mysql_version_number \>\= $mysql_version_req_number`
++ if test "$mysql_version_check" = "1"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
++$as_echo "yes" >&6; }
++ else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++ fi
++ fi
++
++
++
++
++
++
++
++@%:@ Check whether --with-postgresql was given.
++if test "${with_postgresql+set}" = set; then :
++ withval=$with_postgresql;
++ if test "$withval" = "no"; then
++ want_postgresql="no"
++ elif test "$withval" = "yes"; then
++ want_postgresql="yes"
++ else
++ want_postgresql="yes"
++ PG_CONFIG="$withval"
++ fi
++
++else
++ want_postgresql="yes"
++
++fi
++
++
++ POSTGRESQL_CFLAGS=""
++ POSTGRESQL_LDFLAGS=""
++ POSTGRESQL_POSTGRESQL=""
++
++
++ if test "$want_postgresql" = "yes"; then
++
++ if test -z "$PG_CONFIG" -o test; then
++ # Extract the first word of "pg_config", so it can be a program name with args.
++set dummy pg_config; ac_word=$2
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
++$as_echo_n "checking for $ac_word... " >&6; }
++if test "${ac_cv_path_PG_CONFIG+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ case $PG_CONFIG in
++ [\\/]* | ?:[\\/]*)
++ ac_cv_path_PG_CONFIG="$PG_CONFIG" # Let the user override the test with a path.
++ ;;
++ *)
++ as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
++ ac_cv_path_PG_CONFIG="$as_dir/$ac_word$ac_exec_ext"
++ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
++ break 2
++ fi
++done
++ done
++IFS=$as_save_IFS
++
++ test -z "$ac_cv_path_PG_CONFIG" && ac_cv_path_PG_CONFIG="no"
++ ;;
++esac
++fi
++PG_CONFIG=$ac_cv_path_PG_CONFIG
++if test -n "$PG_CONFIG"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $PG_CONFIG" >&5
++$as_echo "$PG_CONFIG" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++
++ fi
++
++ if test "$PG_CONFIG" != "no"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for PostgreSQL libraries" >&5
++$as_echo_n "checking for PostgreSQL libraries... " >&6; }
++
++ POSTGRESQL_CFLAGS="-I`$PG_CONFIG --includedir`"
++ POSTGRESQL_LDFLAGS="-L`$PG_CONFIG --libdir` -lpq"
++
++ POSTGRESQL_VERSION=`$PG_CONFIG --version | sed -e 's#PostgreSQL ##'`
++
++
++$as_echo "@%:@define HAVE_POSTGRESQL 1" >>confdefs.h
++
++
++ found_postgresql="yes"
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
++$as_echo "yes" >&6; }
++ else
++ found_postgresql="no"
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: Not configuring for PostgreSQL" >&5
++$as_echo "Not configuring for PostgreSQL" >&6; }
++ fi
++ fi
++
++
++
++ postgresql_version_req=
++
++ if test "$found_postgresql" = "yes" -a -n "$postgresql_version_req"; then
++
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking if PostgreSQL version is >= $postgresql_version_req" >&5
++$as_echo_n "checking if PostgreSQL version is >= $postgresql_version_req... " >&6; }
++
++ postgresql_version_req_major=`expr $postgresql_version_req : '\([0-9]*\)'`
++ postgresql_version_req_minor=`expr $postgresql_version_req : '[0-9]*\.\([0-9]*\)'`
++ postgresql_version_req_micro=`expr $postgresql_version_req : '[0-9]*\.[0-9]*\.\([0-9]*\)'`
++ if test "x$postgresql_version_req_micro" = "x"; then
++ postgresql_version_req_micro="0"
++ fi
++
++ postgresql_version_req_number=`expr $postgresql_version_req_major \* 1000000 \
++ \+ $postgresql_version_req_minor \* 1000 \
++ \+ $postgresql_version_req_micro`
++
++ postgresql_version_major=`expr $POSTGRESQL_VERSION : '\([0-9]*\)'`
++ postgresql_version_minor=`expr $POSTGRESQL_VERSION : '[0-9]*\.\([0-9]*\)'`
++ postgresql_version_micro=`expr $POSTGRESQL_VERSION : '[0-9]*\.[0-9]*\.\([0-9]*\)'`
++ if test "x$postgresql_version_micro" = "x"; then
++ postgresql_version_micro="0"
++ fi
++
++ postgresql_version_number=`expr $postgresql_version_major \* 1000000 \
++ \+ $postgresql_version_minor \* 1000 \
++ \+ $postgresql_version_micro`
++
++ postgresql_version_check=`expr $postgresql_version_number \>\= $postgresql_version_req_number`
++ if test "$postgresql_version_check" = "1"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
++$as_echo "yes" >&6; }
++ else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++ fi
++ fi
++
++
++
++
++
++
++CFLAGS="$CFLAGS $MYSQL_CFLAGS"
++LDFLAGS="$LDFLAGS $MYSQL_LDFLAGS"
++
++CFLAGS="$CFLAGS $POSTGRESQL_CFLAGS"
++LDFLAGS="$LDFLAGS $POSTGRESQL_LDFLAGS"
++
++
++
++# Extract the first word of "javac", so it can be a program name with args.
++set dummy javac; ac_word=$2
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
++$as_echo_n "checking for $ac_word... " >&6; }
++if test "${ac_cv_prog_javac_in_path+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test -n "$javac_in_path"; then
++ ac_cv_prog_javac_in_path="$javac_in_path" # Let the user override the test.
++else
++as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
++ ac_cv_prog_javac_in_path="true"
++ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
++ break 2
++ fi
++done
++ done
++IFS=$as_save_IFS
++
++ test -z "$ac_cv_prog_javac_in_path" && ac_cv_prog_javac_in_path="false"
++fi
++fi
++javac_in_path=$ac_cv_prog_javac_in_path
++if test -n "$javac_in_path"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $javac_in_path" >&5
++$as_echo "$javac_in_path" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++
++# Extract the first word of "ant", so it can be a program name with args.
++set dummy ant; ac_word=$2
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for $ac_word" >&5
++$as_echo_n "checking for $ac_word... " >&6; }
++if test "${ac_cv_prog_ant_in_path+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ if test -n "$ant_in_path"; then
++ ac_cv_prog_ant_in_path="$ant_in_path" # Let the user override the test.
++else
++as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ for ac_exec_ext in '' $ac_executable_extensions; do
++ if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
++ ac_cv_prog_ant_in_path="true"
++ $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
++ break 2
++ fi
++done
++ done
++IFS=$as_save_IFS
++
++ test -z "$ac_cv_prog_ant_in_path" && ac_cv_prog_ant_in_path="false"
++fi
++fi
++ant_in_path=$ac_cv_prog_ant_in_path
++if test -n "$ant_in_path"; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ant_in_path" >&5
++$as_echo "$ant_in_path" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++
++ if test "$ant_in_path" = "true" && "$javac_in_path" = "true"; then
++ EHAVEANT_TRUE=
++ EHAVEANT_FALSE='#'
++else
++ EHAVEANT_TRUE='#'
++ EHAVEANT_FALSE=
++fi
++
++
++
++
++
++
++
++
++
++
++
++
++
++
++#dnl Test if --enable-corba is given
++#AC_ARG_ENABLE(corba,
++# AS_HELP_STRING([--enable-corba], [corba (need glib and orbit)]))
++#if test "${enable_corba}" = "yes" ; then
++#AC_MSG_CHECKING(for ORBit and glib)
++#CPPFLAGS="$CPPFLAGS -I/usr/lib/glib/include -I/usr/local/lib/glib/include"
++#
++#AC_CHECK_HEADERS(glib.h)
++#AC_CHECK_HEADERS(orb/orbit.h)
++#AC_CHECK_LIB(glib, main)
++#
++#AC_CHECK_LIB(ORBitutil, main)
++#AC_CHECK_LIB(IIOP, main)
++#AC_CHECK_LIB(ORBit, main)
++#fi
++
++@%:@ Check whether --enable-debug was given.
++if test "${enable_debug+set}" = set; then :
++ enableval=$enable_debug;
++fi
++
++if test "${enable_debug}" = "yes" ; then
++ CFLAGS="$CFLAGS -g"
++fi
++
++
++if test "`uname`" = "IRIX" || test "`uname`" = "IRIX64"; then
++CFLAGS="-Wl,-LD_MSG:off=85:off=84:off=16:off=134 $CFLAGS"
++fi
++
++
++
++
++if test "${enable_large+set}" != set; then
++enable_large=yes
++fi
++
++
++@%:@ Check whether --enable-large was given.
++if test "${enable_large+set}" = set; then :
++ enableval=$enable_large;
++fi
++
++if test "${enable_large}" = "yes" ; then
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for large file support" >&5
++$as_echo_n "checking for large file support... " >&6; }
++
++if test "`uname`" = "Linux"; then
++CPPFLAGS="-DAJ_LinuxLF -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE $CPPFLAGS"
++fi
++
++if test "`uname`" = "FreeBSD"; then
++CPPFLAGS="-DAJ_FreeBSDLF $CPPFLAGS"
++fi
++
++if test "`uname`" = "SunOS"; then
++CPPFLAGS="-DAJ_SolarisLF -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE $CPPFLAGS"
++fi
++
++if test "`uname`" = "OSF1"; then
++CPPFLAGS="-DAJ_OSF1LF $CPPFLAGS"
++fi
++
++if test "`uname`" = "IRIX" || test "`uname`" = "IRIX64"; then
++CPPFLAGS="-DAJ_IRIXLF -D_LARGEFILE64_SOURCE $CPPFLAGS"
++fi
++
++if test "`uname`" = "AIX"; then
++CPPFLAGS="-DAJ_AIXLF -D_LARGE_FILES $CPPFLAGS"
++fi
++
++if test "`uname`" = "HP-UX"; then
++CPPFLAGS="-DAJ_HPUXLF -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 $CPPFLAGS"
++fi
++
++if test "`uname`" = "Darwin"; then
++CPPFLAGS="-DAJ_MACOSXLF $CPPFLAGS"
++fi
++
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: done" >&5
++$as_echo "done" >&6; }
++fi
++
++
++
++
++
++
++
++have_systemlibs=no
++@%:@ Check whether --enable-systemlibs was given.
++if test "${enable_systemlibs+set}" = set; then :
++ enableval=$enable_systemlibs;
++fi
++
++if test "${enable_systemlibs}" = "yes" ; then
++ have_systemlibs=yes
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for pcre_compile in -lpcre" >&5
++$as_echo_n "checking for pcre_compile in -lpcre... " >&6; }
++if test "${ac_cv_lib_pcre_pcre_compile+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ ac_check_lib_save_LIBS=$LIBS
++LIBS="-lpcre $LIBS"
++cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++/* Override any GCC internal prototype to avoid an error.
++ Use char because int might match the return type of a GCC
++ builtin and then its argument prototype would still apply. */
++#ifdef __cplusplus
++extern "C"
++#endif
++char pcre_compile ();
++int
++main ()
++{
++return pcre_compile ();
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_link "$LINENO"; then :
++ ac_cv_lib_pcre_pcre_compile=yes
++else
++ ac_cv_lib_pcre_pcre_compile=no
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext conftest.$ac_ext
++LIBS=$ac_check_lib_save_LIBS
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_pcre_pcre_compile" >&5
++$as_echo "$ac_cv_lib_pcre_pcre_compile" >&6; }
++if test "x$ac_cv_lib_pcre_pcre_compile" = x""yes; then :
++ cat >>confdefs.h <<_ACEOF
++@%:@define HAVE_LIBPCRE 1
++_ACEOF
++
++ LIBS="-lpcre $LIBS"
++
++fi
++
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for XML_ParserCreate in -lexpat" >&5
++$as_echo_n "checking for XML_ParserCreate in -lexpat... " >&6; }
++if test "${ac_cv_lib_expat_XML_ParserCreate+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ ac_check_lib_save_LIBS=$LIBS
++LIBS="-lexpat $LIBS"
++cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++/* Override any GCC internal prototype to avoid an error.
++ Use char because int might match the return type of a GCC
++ builtin and then its argument prototype would still apply. */
++#ifdef __cplusplus
++extern "C"
++#endif
++char XML_ParserCreate ();
++int
++main ()
++{
++return XML_ParserCreate ();
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_link "$LINENO"; then :
++ ac_cv_lib_expat_XML_ParserCreate=yes
++else
++ ac_cv_lib_expat_XML_ParserCreate=no
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext conftest.$ac_ext
++LIBS=$ac_check_lib_save_LIBS
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_expat_XML_ParserCreate" >&5
++$as_echo "$ac_cv_lib_expat_XML_ParserCreate" >&6; }
++if test "x$ac_cv_lib_expat_XML_ParserCreate" = x""yes; then :
++ cat >>confdefs.h <<_ACEOF
++@%:@define HAVE_LIBEXPAT 1
++_ACEOF
++
++ LIBS="-lexpat $LIBS"
++
++fi
++
++fi
++ if test "$have_systemlibs" = "yes"; then
++ ESYSTEMLIBS_TRUE=
++ ESYSTEMLIBS_FALSE='#'
++else
++ ESYSTEMLIBS_TRUE='#'
++ ESYSTEMLIBS_FALSE=
++fi
++
++
++
++
++
++
++
++
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for purify" >&5
++$as_echo_n "checking for purify... " >&6; }
++ @%:@ Check whether --enable-purify was given.
++if test "${enable_purify+set}" = set; then :
++ enableval=$enable_purify;
++fi
++
++if test "${enable_purify}" = "yes" ; then
++ CC="purify --chain-length="20" -best-effort -windows=yes gcc -g"
++ LIBTOOL="$LIBTOOL --tag=CC"
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
++$as_echo "yes" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++
++
++if test "${with_gccprofile}" = "yes" ; then
++ CFLAGS="$CFLAGS -pg"
++ LDFLAGS="$LDFLAGS -pg"
++fi
++
++
++
++have_warnings=no
++
++@%:@ Check whether --enable-warnings was given.
++if test "${enable_warnings+set}" = set; then :
++ enableval=$enable_warnings;
++fi
++
++if test "${enable_warnings}" = "yes" ; then
++ if test "$CC" = "gcc"; then
++ have_warnings=yes
++ WARN_CFLAGS="-Wall -fno-strict-aliasing"
++ fi
++fi
++ if test "$have_warnings" = "yes"; then
++ WARNINGS_TRUE=
++ WARNINGS_FALSE='#'
++else
++ WARNINGS_TRUE='#'
++ WARNINGS_FALSE=
++fi
++
++
++
++
++if test "$CC" = "cc"; then
++ case "$host" in
++ alpha*-dec-osf*) CFLAGS="$CFLAGS -ieee";;
++ esac
++fi
++ if test "${enable_purify}" = "yes"; then
++ PURIFY_TRUE=
++ PURIFY_FALSE='#'
++else
++ PURIFY_TRUE='#'
++ PURIFY_FALSE=
++fi
++
++
++
++ if test "$CC" = "gcc"; then
++ ISGCC_TRUE=
++ ISGCC_FALSE='#'
++else
++ ISGCC_TRUE='#'
++ ISGCC_FALSE=
++fi
++
++
++
++
++
++
++
++
++have_devwarnings=no
++
++@%:@ Check whether --enable-devwarnings was given.
++if test "${enable_devwarnings+set}" = set; then :
++ enableval=$enable_devwarnings;
++fi
++
++if test "${enable_devwarnings}" = "yes" ; then
++ if test "$CC" = "gcc"; then
++ have_devwarnings=yes
++ DEVWARN_CFLAGS="-Wextra"
++
++ DEVWARN_CFLAGS="$DEVWARN_CFLAGS -Wstrict-prototypes -Wmissing-prototypes"
++ DEVWARN_CFLAGS="$DEVWARN_CFLAGS -Wold-style-definition -Wmissing-declarations"
++
++ DEVWARN_CFLAGS="$DEVWARN_CFLAGS -Wwrite-strings"
++
++ DEVWARN_CFLAGS="$DEVWARN_CFLAGS -Wshadow"
++
++ DEVWARN_CFLAGS="$DEVWARN_CFLAGS -Wdeclaration-after-statement -Wundef"
++ DEVWARN_CFLAGS="$DEVWARN_CFLAGS -Wpointer-arith"
++ DEVWARN_CFLAGS="$DEVWARN_CFLAGS -Wcast-qual -Wcast-align"
++
++ DEVWARN_CFLAGS="$DEVWARN_CFLAGS -Wbad-function-cast"
++
++ DEVWARN_CFLAGS="$DEVWARN_CFLAGS -Wsign-compare"
++
++ DEVWARN_CFLAGS="$DEVWARN_CFLAGS -Wmissing-field-initializers"
++ DEVWARN_CFLAGS="$DEVWARN_CFLAGS -Wmissing-noreturn -Wnested-externs"
++ DEVWARN_CFLAGS="$DEVWARN_CFLAGS -Wredundant-decls"
++
++
++
++
++
++ fi
++fi
++
++
++@%:@ Check whether --enable-devextrawarnings was given.
++if test "${enable_devextrawarnings+set}" = set; then :
++ enableval=$enable_devextrawarnings;
++fi
++
++if test "${enable_devextrawarnings}" = "yes" ; then
++ if test "$have_devwarnings" = "yes"; then
++
++ DEVWARN_CFLAGS="$DEVWARN_CFLAGS -Wpadded"
++
++ fi
++fi
++
++
++ if test "$have_devwarnings" = "yes"; then
++ DEVWARNINGS_TRUE=
++ DEVWARNINGS_FALSE='#'
++else
++ DEVWARNINGS_TRUE='#'
++ DEVWARNINGS_FALSE=
++fi
++
++
++
++platform_cygwin='no'
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for cygwin" >&5
++$as_echo_n "checking for cygwin... " >&6; }
++case "$host" in
++ *-*-mingw*|*-*-cygwin*)
++ platform_cygwin='yes'
++ ;;
++ *)
++ platform_cygwin='no'
++ ;;
++esac
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $platform_cygwin" >&5
++$as_echo "$platform_cygwin" >&6; }
++ if test "$platform_cygwin" = "yes"; then
++ ISCYGWIN_TRUE=
++ ISCYGWIN_FALSE='#'
++else
++ ISCYGWIN_TRUE='#'
++ ISCYGWIN_FALSE=
++fi
++
++
++
++needajax=no
++ if test "`uname`" = "AIX"; then
++ ISAIXIA64_TRUE=
++ ISAIXIA64_FALSE='#'
++else
++ ISAIXIA64_TRUE='#'
++ ISAIXIA64_FALSE=
++fi
++
++ if test "${enable_shared}" = "yes"; then
++ ISSHARED_TRUE=
++ ISSHARED_FALSE='#'
++else
++ ISSHARED_TRUE='#'
++ ISSHARED_FALSE=
++fi
++
++
++
++if test "`uname`" = "AIX"; then
++if test -d ajax/.libs ; then
++ echo AIX ajax/.libs exists
++else
++ mkdir ajax/.libs
++fi
++
++#if test "$host_os" = "aix5.1.0.0"; then
++# echo $host_os
++# exit 0
++#fi
++case $host_os in
++ aix5*) needajax=no ;;
++ aix4.3.3*) needajax=yes ;;
++ *) needajax=no ;;
++esac
++fi
++ if test "$needajax" = "yes"; then
++ NEEDAJAX_TRUE=
++ NEEDAJAX_FALSE='#'
++else
++ NEEDAJAX_TRUE='#'
++ NEEDAJAX_FALSE=
++fi
++
++
++
++
++
++if test "`uname`" = "HP-UX"; then
++LDFLAGS="$LDFLAGS -lsec"
++fi
++
++
++
++if test "${enable_mprobe+set}" != set; then
++enable_mprobe=no
++fi
++
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for mprobe" >&5
++$as_echo_n "checking for mprobe... " >&6; }
++@%:@ Check whether --enable-mprobe was given.
++if test "${enable_mprobe+set}" = set; then :
++ enableval=$enable_mprobe;
++fi
++
++if test "${enable_mprobe}" = "yes" ; then
++ CPPFLAGS="-DAJ_MPROBE $CPPFLAGS"
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
++$as_echo "yes" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++
++if test "${enable_savestats+set}" != set; then
++enable_savestats=no
++fi
++
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for savestats" >&5
++$as_echo_n "checking for savestats... " >&6; }
++@%:@ Check whether --enable-savestats was given.
++if test "${enable_savestats+set}" = set; then :
++ enableval=$enable_savestats;
++fi
++
++if test "${enable_savestats}" = "yes" ; then
++ CPPFLAGS="-DAJ_SAVESTATS $CPPFLAGS"
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
++$as_echo "yes" >&6; }
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++
++#
++# Handle jemboss threading options
++#
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking if any threading type is given" >&5
++$as_echo_n "checking if any threading type is given... " >&6; }
++
++@%:@ Check whether --with-thread was given.
++if test "${with_thread+set}" = set; then :
++ withval=$with_thread; if test "$withval" != no ; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
++$as_echo "yes" >&6; }
++
++ ALT_THREADTYPE="-D${withval}"
++
++ if test "$withval" = "yes" ; then
++ CFLAGS="$CFLAGS -D_REENTRANT"
++ LDFLAGS="$LDFLAGS -lpthread"
++ LIBS="$LIBS -lpthread"
++ fi
++
++ if test "$withval" = "freebsd" ; then
++ CFLAGS="$CFLAGS -D_THREAD_SAFE -pthread"
++ LDFLAGS="$LDFLAGS"
++ LIBS="$LIBS -lc_r"
++ fi
++
++ if test "$withval" = "linux" ; then
++ CFLAGS="$CFLAGS -D_REENTRANT"
++ LDFLAGS="$LDFLAGS -lpthread"
++ LIBS="$LIBS -lpthread"
++ fi
++
++ if test "$withval" = "solaris" ; then
++ CFLAGS="$CFLAGS -D_POSIX_C_SOURCE=199506L"
++ LDFLAGS="$LDFLAGS -lpthread"
++ LIBS="$LIBS -lpthread"
++ fi
++ if test "$withval" = "macos" ; then
++ CFLAGS="$CFLAGS"
++ LDFLAGS="$LDFLAGS -lpthread"
++ LIBS="$LIBS -lpthread"
++ fi
++ if test "$withval" = "hpux" ; then
++ CFLAGS="$CFLAGS -Ae +z -DNATIVE -D_POSIX_C_SOURCE=199506L"
++ LDFLAGS="$LDFLAGS -lpthread"
++ LIBS="$LIBS -lpthread"
++ fi
++ if test "$withval" = "irix" ; then
++ CFLAGS="$CFLAGS"
++ LDFLAGS="$LDFLAGS -lpthread"
++ LIBS="$LIBS -lpthread"
++ fi
++ if test "$withval" = "aix" ; then
++ CFLAGS="$CFLAGS -D_REENTRANT"
++ LDFLAGS="$LDFLAGS -lpthread"
++ LIBS="$LIBS -lpthread"
++ fi
++ if test "$withval" = "osf" ; then
++ CFLAGS="$CFLAGS -D_REENTRANT -D_OSF_SOURCE"
++ LDFLAGS="$LDFLAGS -lpthread"
++ LIBS="$LIBS -lpthread"
++ fi
++else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++fi
++else
++
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++
++fi
++
++
++
++
++ac_config_files="$ac_config_files nucleus/Makefile ajax/Makefile ajax/core/Makefile ajax/graphics/Makefile ajax/ensembl/Makefile ajax/ajaxdb/Makefile ajax/acd/Makefile emboss/Makefile emboss/acd/Makefile test/Makefile test/data/Makefile test/embl/Makefile test/genbank/Makefile test/pir/Makefile test/swiss/Makefile test/swnew/Makefile test/testdb/Makefile emboss/data/Makefile emboss/data/AAINDEX/Makefile emboss/data/CODONS/Makefile emboss/data/REBASE/Makefile emboss/data/JASPAR_CORE/Makefile emboss/data/JASPAR_FAM/Makefile emboss/data/JASPAR_PHYLOFACTS/Makefile emboss/data/JASPAR_CNE/Makefile emboss/data/JASPAR_POLII/Makefile emboss/data/JASPAR_SPLICE/Makefile emboss/data/JASPAR_PBM/Makefile emboss/data/JASPAR_PBM_HLH/Makefile emboss/data/JASPAR_PBM_HOMEO/Makefile emboss/data/PRINTS/Makefile emboss/data/PROSITE/Makefile doc/Makefile doc/manuals/Makefile doc/tutorials/Makefile doc/programs/Makefile doc/programs/html/Makefile doc/programs/text/Makefile jemboss/Makefile jemboss
/images/Makefile jemboss/lib/Makefile jemboss/lib/axis/Makefile jemboss/resources/Makefile jemboss/utils/Makefile Makefile"
++
++cat >confcache <<\_ACEOF
++# This file is a shell script that caches the results of configure
++# tests run on this system so they can be shared between configure
++# scripts and configure runs, see configure's option --config-cache.
++# It is not useful on other systems. If it contains results you don't
++# want to keep, you may remove or edit it.
++#
++# config.status only pays attention to the cache file if you give it
++# the --recheck option to rerun configure.
++#
++# `ac_cv_env_foo' variables (set or unset) will be overridden when
++# loading this file, other *unset* `ac_cv_foo' will be assigned the
++# following values.
++
++_ACEOF
++
++# The following way of writing the cache mishandles newlines in values,
++# but we know of no workaround that is simple, portable, and efficient.
++# So, we kill variables containing newlines.
++# Ultrix sh set writes to stderr and can't be redirected directly,
++# and sets the high bit in the cache file unless we assign to the vars.
++(
++ for ac_var in `(set) 2>&1 | sed -n 's/^\([a-zA-Z_][a-zA-Z0-9_]*\)=.*/\1/p'`; do
++ eval ac_val=\$$ac_var
++ case $ac_val in #(
++ *${as_nl}*)
++ case $ac_var in #(
++ *_cv_*) { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: cache variable $ac_var contains a newline" >&5
++$as_echo "$as_me: WARNING: cache variable $ac_var contains a newline" >&2;} ;;
++ esac
++ case $ac_var in #(
++ _ | IFS | as_nl) ;; #(
++ BASH_ARGV | BASH_SOURCE) eval $ac_var= ;; #(
++ *) { eval $ac_var=; unset $ac_var;} ;;
++ esac ;;
++ esac
++ done
++
++ (set) 2>&1 |
++ case $as_nl`(ac_space=' '; set) 2>&1` in #(
++ *${as_nl}ac_space=\ *)
++ # `set' does not quote correctly, so add quotes: double-quote
++ # substitution turns \\\\ into \\, and sed turns \\ into \.
++ sed -n \
++ "s/'/'\\\\''/g;
++ s/^\\([_$as_cr_alnum]*_cv_[_$as_cr_alnum]*\\)=\\(.*\\)/\\1='\\2'/p"
++ ;; #(
++ *)
++ # `set' quotes correctly as required by POSIX, so do not add quotes.
++ sed -n "/^[_$as_cr_alnum]*_cv_[_$as_cr_alnum]*=/p"
++ ;;
++ esac |
++ sort
++) |
++ sed '
++ /^ac_cv_env_/b end
++ t clear
++ :clear
++ s/^\([^=]*\)=\(.*[{}].*\)$/test "${\1+set}" = set || &/
++ t end
++ s/^\([^=]*\)=\(.*\)$/\1=${\1=\2}/
++ :end' >>confcache
++if diff "$cache_file" confcache >/dev/null 2>&1; then :; else
++ if test -w "$cache_file"; then
++ test "x$cache_file" != "x/dev/null" &&
++ { $as_echo "$as_me:${as_lineno-$LINENO}: updating cache $cache_file" >&5
++$as_echo "$as_me: updating cache $cache_file" >&6;}
++ cat confcache >$cache_file
++ else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: not updating unwritable cache $cache_file" >&5
++$as_echo "$as_me: not updating unwritable cache $cache_file" >&6;}
++ fi
++fi
++rm -f confcache
++
++test "x$prefix" = xNONE && prefix=$ac_default_prefix
++# Let make expand exec_prefix.
++test "x$exec_prefix" = xNONE && exec_prefix='${prefix}'
++
++# Transform confdefs.h into DEFS.
++# Protect against shell expansion while executing Makefile rules.
++# Protect against Makefile macro expansion.
++#
++# If the first sed substitution is executed (which looks for macros that
++# take arguments), then branch to the quote section. Otherwise,
++# look for a macro that doesn't take arguments.
++ac_script='
++:mline
++/\\$/{
++ N
++ s,\\\n,,
++ b mline
++}
++t clear
++:clear
++s/^[ ]*#[ ]*define[ ][ ]*\([^ (][^ (]*([^)]*)\)[ ]*\(.*\)/-D\1=\2/g
++t quote
++s/^[ ]*#[ ]*define[ ][ ]*\([^ ][^ ]*\)[ ]*\(.*\)/-D\1=\2/g
++t quote
++b any
++:quote
++s/[ `~#$^&*(){}\\|;'\''"<>?]/\\&/g
++s/\[/\\&/g
++s/\]/\\&/g
++s/\$/$$/g
++H
++:any
++${
++ g
++ s/^\n//
++ s/\n/ /g
++ p
++}
++'
++DEFS=`sed -n "$ac_script" confdefs.h`
++
++
++ac_libobjs=
++ac_ltlibobjs=
++for ac_i in : $LIB@&t at OBJS; do test "x$ac_i" = x: && continue
++ # 1. Remove the extension, and $U if already installed.
++ ac_script='s/\$U\././;s/\.o$//;s/\.obj$//'
++ ac_i=`$as_echo "$ac_i" | sed "$ac_script"`
++ # 2. Prepend LIBOBJDIR. When used with automake>=1.10 LIBOBJDIR
++ # will be set to the directory where LIBOBJS objects are built.
++ as_fn_append ac_libobjs " \${LIBOBJDIR}$ac_i\$U.$ac_objext"
++ as_fn_append ac_ltlibobjs " \${LIBOBJDIR}$ac_i"'$U.lo'
++done
++LIB@&t at OBJS=$ac_libobjs
++
++LTLIBOBJS=$ac_ltlibobjs
++
++
++ if test -n "$EXEEXT"; then
++ am__EXEEXT_TRUE=
++ am__EXEEXT_FALSE='#'
++else
++ am__EXEEXT_TRUE='#'
++ am__EXEEXT_FALSE=
++fi
++
++if test -z "${AMDEP_TRUE}" && test -z "${AMDEP_FALSE}"; then
++ as_fn_error "conditional \"AMDEP\" was never defined.
++Usually this means the macro was only invoked conditionally." "$LINENO" 5
++fi
++if test -z "${am__fastdepCC_TRUE}" && test -z "${am__fastdepCC_FALSE}"; then
++ as_fn_error "conditional \"am__fastdepCC\" was never defined.
++Usually this means the macro was only invoked conditionally." "$LINENO" 5
++fi
++if test -z "${am__fastdepCC_TRUE}" && test -z "${am__fastdepCC_FALSE}"; then
++ as_fn_error "conditional \"am__fastdepCC\" was never defined.
++Usually this means the macro was only invoked conditionally." "$LINENO" 5
++fi
++
++if test -z "${AMPNG_TRUE}" && test -z "${AMPNG_FALSE}"; then
++ as_fn_error "conditional \"AMPNG\" was never defined.
++Usually this means the macro was only invoked conditionally." "$LINENO" 5
++fi
++if test -z "${AMPDF_TRUE}" && test -z "${AMPDF_FALSE}"; then
++ as_fn_error "conditional \"AMPDF\" was never defined.
++Usually this means the macro was only invoked conditionally." "$LINENO" 5
++fi
++if test -z "${AMPDF_TRUE}" && test -z "${AMPDF_FALSE}"; then
++ as_fn_error "conditional \"AMPDF\" was never defined.
++Usually this means the macro was only invoked conditionally." "$LINENO" 5
++fi
++if test -z "${AMPDF_TRUE}" && test -z "${AMPDF_FALSE}"; then
++ as_fn_error "conditional \"AMPDF\" was never defined.
++Usually this means the macro was only invoked conditionally." "$LINENO" 5
++fi
++if test -z "${AMPNG_TRUE}" && test -z "${AMPNG_FALSE}"; then
++ as_fn_error "conditional \"AMPNG\" was never defined.
++Usually this means the macro was only invoked conditionally." "$LINENO" 5
++fi
++if test -z "${AMPNG_TRUE}" && test -z "${AMPNG_FALSE}"; then
++ as_fn_error "conditional \"AMPNG\" was never defined.
++Usually this means the macro was only invoked conditionally." "$LINENO" 5
++fi
++if test -z "${EHAVEANT_TRUE}" && test -z "${EHAVEANT_FALSE}"; then
++ as_fn_error "conditional \"EHAVEANT\" was never defined.
++Usually this means the macro was only invoked conditionally." "$LINENO" 5
++fi
++if test -z "${ESYSTEMLIBS_TRUE}" && test -z "${ESYSTEMLIBS_FALSE}"; then
++ as_fn_error "conditional \"ESYSTEMLIBS\" was never defined.
++Usually this means the macro was only invoked conditionally." "$LINENO" 5
++fi
++if test -z "${WARNINGS_TRUE}" && test -z "${WARNINGS_FALSE}"; then
++ as_fn_error "conditional \"WARNINGS\" was never defined.
++Usually this means the macro was only invoked conditionally." "$LINENO" 5
++fi
++if test -z "${PURIFY_TRUE}" && test -z "${PURIFY_FALSE}"; then
++ as_fn_error "conditional \"PURIFY\" was never defined.
++Usually this means the macro was only invoked conditionally." "$LINENO" 5
++fi
++if test -z "${ISGCC_TRUE}" && test -z "${ISGCC_FALSE}"; then
++ as_fn_error "conditional \"ISGCC\" was never defined.
++Usually this means the macro was only invoked conditionally." "$LINENO" 5
++fi
++if test -z "${DEVWARNINGS_TRUE}" && test -z "${DEVWARNINGS_FALSE}"; then
++ as_fn_error "conditional \"DEVWARNINGS\" was never defined.
++Usually this means the macro was only invoked conditionally." "$LINENO" 5
++fi
++if test -z "${ISCYGWIN_TRUE}" && test -z "${ISCYGWIN_FALSE}"; then
++ as_fn_error "conditional \"ISCYGWIN\" was never defined.
++Usually this means the macro was only invoked conditionally." "$LINENO" 5
++fi
++if test -z "${ISAIXIA64_TRUE}" && test -z "${ISAIXIA64_FALSE}"; then
++ as_fn_error "conditional \"ISAIXIA64\" was never defined.
++Usually this means the macro was only invoked conditionally." "$LINENO" 5
++fi
++if test -z "${ISSHARED_TRUE}" && test -z "${ISSHARED_FALSE}"; then
++ as_fn_error "conditional \"ISSHARED\" was never defined.
++Usually this means the macro was only invoked conditionally." "$LINENO" 5
++fi
++if test -z "${NEEDAJAX_TRUE}" && test -z "${NEEDAJAX_FALSE}"; then
++ as_fn_error "conditional \"NEEDAJAX\" was never defined.
++Usually this means the macro was only invoked conditionally." "$LINENO" 5
++fi
++
++: ${CONFIG_STATUS=./config.status}
++ac_write_fail=0
++ac_clean_files_save=$ac_clean_files
++ac_clean_files="$ac_clean_files $CONFIG_STATUS"
++{ $as_echo "$as_me:${as_lineno-$LINENO}: creating $CONFIG_STATUS" >&5
++$as_echo "$as_me: creating $CONFIG_STATUS" >&6;}
++as_write_fail=0
++cat >$CONFIG_STATUS <<_ASEOF || as_write_fail=1
++#! $SHELL
++# Generated by $as_me.
++# Run this file to recreate the current configuration.
++# Compiler output produced by configure, useful for debugging
++# configure, is in config.log if it exists.
++
++debug=false
++ac_cs_recheck=false
++ac_cs_silent=false
++
++SHELL=\${CONFIG_SHELL-$SHELL}
++export SHELL
++_ASEOF
++cat >>$CONFIG_STATUS <<\_ASEOF || as_write_fail=1
++## -------------------- ##
++## M4sh Initialization. ##
++## -------------------- ##
++
++# Be more Bourne compatible
++DUALCASE=1; export DUALCASE # for MKS sh
++if test -n "${ZSH_VERSION+set}" && (emulate sh) >/dev/null 2>&1; then :
++ emulate sh
++ NULLCMD=:
++ # Pre-4.2 versions of Zsh do word splitting on ${1+"$@"}, which
++ # is contrary to our usage. Disable this feature.
++ alias -g '${1+"$@"}'='"$@"'
++ setopt NO_GLOB_SUBST
++else
++ case `(set -o) 2>/dev/null` in @%:@(
++ *posix*) :
++ set -o posix ;; @%:@(
++ *) :
++ ;;
++esac
++fi
++
++
++as_nl='
++'
++export as_nl
++# Printing a long string crashes Solaris 7 /usr/bin/printf.
++as_echo='\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\\'
++as_echo=$as_echo$as_echo$as_echo$as_echo$as_echo
++as_echo=$as_echo$as_echo$as_echo$as_echo$as_echo$as_echo
++# Prefer a ksh shell builtin over an external printf program on Solaris,
++# but without wasting forks for bash or zsh.
++if test -z "$BASH_VERSION$ZSH_VERSION" \
++ && (test "X`print -r -- $as_echo`" = "X$as_echo") 2>/dev/null; then
++ as_echo='print -r --'
++ as_echo_n='print -rn --'
++elif (test "X`printf %s $as_echo`" = "X$as_echo") 2>/dev/null; then
++ as_echo='printf %s\n'
++ as_echo_n='printf %s'
++else
++ if test "X`(/usr/ucb/echo -n -n $as_echo) 2>/dev/null`" = "X-n $as_echo"; then
++ as_echo_body='eval /usr/ucb/echo -n "$1$as_nl"'
++ as_echo_n='/usr/ucb/echo -n'
++ else
++ as_echo_body='eval expr "X$1" : "X\\(.*\\)"'
++ as_echo_n_body='eval
++ arg=$1;
++ case $arg in @%:@(
++ *"$as_nl"*)
++ expr "X$arg" : "X\\(.*\\)$as_nl";
++ arg=`expr "X$arg" : ".*$as_nl\\(.*\\)"`;;
++ esac;
++ expr "X$arg" : "X\\(.*\\)" | tr -d "$as_nl"
++ '
++ export as_echo_n_body
++ as_echo_n='sh -c $as_echo_n_body as_echo'
++ fi
++ export as_echo_body
++ as_echo='sh -c $as_echo_body as_echo'
++fi
++
++# The user is always right.
++if test "${PATH_SEPARATOR+set}" != set; then
++ PATH_SEPARATOR=:
++ (PATH='/bin;/bin'; FPATH=$PATH; sh -c :) >/dev/null 2>&1 && {
++ (PATH='/bin:/bin'; FPATH=$PATH; sh -c :) >/dev/null 2>&1 ||
++ PATH_SEPARATOR=';'
++ }
++fi
++
++
++# IFS
++# We need space, tab and new line, in precisely that order. Quoting is
++# there to prevent editors from complaining about space-tab.
++# (If _AS_PATH_WALK were called with IFS unset, it would disable word
++# splitting by setting IFS to empty value.)
++IFS=" "" $as_nl"
++
++# Find who we are. Look in the path if we contain no directory separator.
++case $0 in @%:@((
++ *[\\/]* ) as_myself=$0 ;;
++ *) as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
++for as_dir in $PATH
++do
++ IFS=$as_save_IFS
++ test -z "$as_dir" && as_dir=.
++ test -r "$as_dir/$0" && as_myself=$as_dir/$0 && break
++ done
++IFS=$as_save_IFS
++
++ ;;
++esac
++# We did not find ourselves, most probably we were run as `sh COMMAND'
++# in which case we are not to be found in the path.
++if test "x$as_myself" = x; then
++ as_myself=$0
++fi
++if test ! -f "$as_myself"; then
++ $as_echo "$as_myself: error: cannot find myself; rerun with an absolute file name" >&2
++ exit 1
++fi
++
++# Unset variables that we do not need and which cause bugs (e.g. in
++# pre-3.0 UWIN ksh). But do not cause bugs in bash 2.01; the "|| exit 1"
++# suppresses any "Segmentation fault" message there. '((' could
++# trigger a bug in pdksh 5.2.14.
++for as_var in BASH_ENV ENV MAIL MAILPATH
++do eval test x\${$as_var+set} = xset \
++ && ( (unset $as_var) || exit 1) >/dev/null 2>&1 && unset $as_var || :
++done
++PS1='$ '
++PS2='> '
++PS4='+ '
++
++# NLS nuisances.
++LC_ALL=C
++export LC_ALL
++LANGUAGE=C
++export LANGUAGE
++
++# CDPATH.
++(unset CDPATH) >/dev/null 2>&1 && unset CDPATH
++
++
++@%:@ as_fn_error ERROR [LINENO LOG_FD]
++@%:@ ---------------------------------
++@%:@ Output "`basename @S|@0`: error: ERROR" to stderr. If LINENO and LOG_FD are
++@%:@ provided, also output the error to LOG_FD, referencing LINENO. Then exit the
++@%:@ script with status @S|@?, using 1 if that was 0.
++as_fn_error ()
++{
++ as_status=$?; test $as_status -eq 0 && as_status=1
++ if test "$3"; then
++ as_lineno=${as_lineno-"$2"} as_lineno_stack=as_lineno_stack=$as_lineno_stack
++ $as_echo "$as_me:${as_lineno-$LINENO}: error: $1" >&$3
++ fi
++ $as_echo "$as_me: error: $1" >&2
++ as_fn_exit $as_status
++} @%:@ as_fn_error
++
++
++@%:@ as_fn_set_status STATUS
++@%:@ -----------------------
++@%:@ Set @S|@? to STATUS, without forking.
++as_fn_set_status ()
++{
++ return $1
++} @%:@ as_fn_set_status
++
++@%:@ as_fn_exit STATUS
++@%:@ -----------------
++@%:@ Exit the shell with STATUS, even in a "trap 0" or "set -e" context.
++as_fn_exit ()
++{
++ set +e
++ as_fn_set_status $1
++ exit $1
++} @%:@ as_fn_exit
++
++@%:@ as_fn_unset VAR
++@%:@ ---------------
++@%:@ Portably unset VAR.
++as_fn_unset ()
++{
++ { eval $1=; unset $1;}
++}
++as_unset=as_fn_unset
++@%:@ as_fn_append VAR VALUE
++@%:@ ----------------------
++@%:@ Append the text in VALUE to the end of the definition contained in VAR. Take
++@%:@ advantage of any shell optimizations that allow amortized linear growth over
++@%:@ repeated appends, instead of the typical quadratic growth present in naive
++@%:@ implementations.
++if (eval "as_var=1; as_var+=2; test x\$as_var = x12") 2>/dev/null; then :
++ eval 'as_fn_append ()
++ {
++ eval $1+=\$2
++ }'
++else
++ as_fn_append ()
++ {
++ eval $1=\$$1\$2
++ }
++fi # as_fn_append
++
++@%:@ as_fn_arith ARG...
++@%:@ ------------------
++@%:@ Perform arithmetic evaluation on the ARGs, and store the result in the
++@%:@ global @S|@as_val. Take advantage of shells that can avoid forks. The arguments
++@%:@ must be portable across @S|@(()) and expr.
++if (eval "test \$(( 1 + 1 )) = 2") 2>/dev/null; then :
++ eval 'as_fn_arith ()
++ {
++ as_val=$(( $* ))
++ }'
++else
++ as_fn_arith ()
++ {
++ as_val=`expr "$@" || test $? -eq 1`
++ }
++fi # as_fn_arith
++
++
++if expr a : '\(a\)' >/dev/null 2>&1 &&
++ test "X`expr 00001 : '.*\(...\)'`" = X001; then
++ as_expr=expr
++else
++ as_expr=false
++fi
++
++if (basename -- /) >/dev/null 2>&1 && test "X`basename -- / 2>&1`" = "X/"; then
++ as_basename=basename
++else
++ as_basename=false
++fi
++
++if (as_dir=`dirname -- /` && test "X$as_dir" = X/) >/dev/null 2>&1; then
++ as_dirname=dirname
++else
++ as_dirname=false
++fi
++
++as_me=`$as_basename -- "$0" ||
++$as_expr X/"$0" : '.*/\([^/][^/]*\)/*$' \| \
++ X"$0" : 'X\(//\)$' \| \
++ X"$0" : 'X\(/\)' \| . 2>/dev/null ||
++$as_echo X/"$0" |
++ sed '/^.*\/\([^/][^/]*\)\/*$/{
++ s//\1/
++ q
++ }
++ /^X\/\(\/\/\)$/{
++ s//\1/
++ q
++ }
++ /^X\/\(\/\).*/{
++ s//\1/
++ q
++ }
++ s/.*/./; q'`
++
++# Avoid depending upon Character Ranges.
++as_cr_letters='abcdefghijklmnopqrstuvwxyz'
++as_cr_LETTERS='ABCDEFGHIJKLMNOPQRSTUVWXYZ'
++as_cr_Letters=$as_cr_letters$as_cr_LETTERS
++as_cr_digits='0123456789'
++as_cr_alnum=$as_cr_Letters$as_cr_digits
++
++ECHO_C= ECHO_N= ECHO_T=
++case `echo -n x` in @%:@(((((
++-n*)
++ case `echo 'xy\c'` in
++ *c*) ECHO_T=' ';; # ECHO_T is single tab character.
++ xy) ECHO_C='\c';;
++ *) echo `echo ksh88 bug on AIX 6.1` > /dev/null
++ ECHO_T=' ';;
++ esac;;
++*)
++ ECHO_N='-n';;
++esac
++
++rm -f conf$$ conf$$.exe conf$$.file
++if test -d conf$$.dir; then
++ rm -f conf$$.dir/conf$$.file
++else
++ rm -f conf$$.dir
++ mkdir conf$$.dir 2>/dev/null
++fi
++if (echo >conf$$.file) 2>/dev/null; then
++ if ln -s conf$$.file conf$$ 2>/dev/null; then
++ as_ln_s='ln -s'
++ # ... but there are two gotchas:
++ # 1) On MSYS, both `ln -s file dir' and `ln file dir' fail.
++ # 2) DJGPP < 2.04 has no symlinks; `ln -s' creates a wrapper executable.
++ # In both cases, we have to default to `cp -p'.
++ ln -s conf$$.file conf$$.dir 2>/dev/null && test ! -f conf$$.exe ||
++ as_ln_s='cp -p'
++ elif ln conf$$.file conf$$ 2>/dev/null; then
++ as_ln_s=ln
++ else
++ as_ln_s='cp -p'
++ fi
++else
++ as_ln_s='cp -p'
++fi
++rm -f conf$$ conf$$.exe conf$$.dir/conf$$.file conf$$.file
++rmdir conf$$.dir 2>/dev/null
++
++
++@%:@ as_fn_mkdir_p
++@%:@ -------------
++@%:@ Create "@S|@as_dir" as a directory, including parents if necessary.
++as_fn_mkdir_p ()
++{
++
++ case $as_dir in #(
++ -*) as_dir=./$as_dir;;
++ esac
++ test -d "$as_dir" || eval $as_mkdir_p || {
++ as_dirs=
++ while :; do
++ case $as_dir in #(
++ *\'*) as_qdir=`$as_echo "$as_dir" | sed "s/'/'\\\\\\\\''/g"`;; #'(
++ *) as_qdir=$as_dir;;
++ esac
++ as_dirs="'$as_qdir' $as_dirs"
++ as_dir=`$as_dirname -- "$as_dir" ||
++$as_expr X"$as_dir" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
++ X"$as_dir" : 'X\(//\)[^/]' \| \
++ X"$as_dir" : 'X\(//\)$' \| \
++ X"$as_dir" : 'X\(/\)' \| . 2>/dev/null ||
++$as_echo X"$as_dir" |
++ sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{
++ s//\1/
++ q
++ }
++ /^X\(\/\/\)[^/].*/{
++ s//\1/
++ q
++ }
++ /^X\(\/\/\)$/{
++ s//\1/
++ q
++ }
++ /^X\(\/\).*/{
++ s//\1/
++ q
++ }
++ s/.*/./; q'`
++ test -d "$as_dir" && break
++ done
++ test -z "$as_dirs" || eval "mkdir $as_dirs"
++ } || test -d "$as_dir" || as_fn_error "cannot create directory $as_dir"
++
++
++} @%:@ as_fn_mkdir_p
++if mkdir -p . 2>/dev/null; then
++ as_mkdir_p='mkdir -p "$as_dir"'
++else
++ test -d ./-p && rmdir ./-p
++ as_mkdir_p=false
++fi
++
++if test -x / >/dev/null 2>&1; then
++ as_test_x='test -x'
++else
++ if ls -dL / >/dev/null 2>&1; then
++ as_ls_L_option=L
++ else
++ as_ls_L_option=
++ fi
++ as_test_x='
++ eval sh -c '\''
++ if test -d "$1"; then
++ test -d "$1/.";
++ else
++ case $1 in @%:@(
++ -*)set "./$1";;
++ esac;
++ case `ls -ld'$as_ls_L_option' "$1" 2>/dev/null` in @%:@((
++ ???[sx]*):;;*)false;;esac;fi
++ '\'' sh
++ '
++fi
++as_executable_p=$as_test_x
++
++# Sed expression to map a string onto a valid CPP name.
++as_tr_cpp="eval sed 'y%*$as_cr_letters%P$as_cr_LETTERS%;s%[^_$as_cr_alnum]%_%g'"
++
++# Sed expression to map a string onto a valid variable name.
++as_tr_sh="eval sed 'y%*+%pp%;s%[^_$as_cr_alnum]%_%g'"
++
++
++exec 6>&1
++## ----------------------------------- ##
++## Main body of $CONFIG_STATUS script. ##
++## ----------------------------------- ##
++_ASEOF
++test $as_write_fail = 0 && chmod +x $CONFIG_STATUS || ac_write_fail=1
++
++cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1
++# Save the log message, to keep $0 and so on meaningful, and to
++# report actual input values of CONFIG_FILES etc. instead of their
++# values after options handling.
++ac_log="
++This file was extended by $as_me, which was
++generated by GNU Autoconf 2.65. Invocation command line was
++
++ CONFIG_FILES = $CONFIG_FILES
++ CONFIG_HEADERS = $CONFIG_HEADERS
++ CONFIG_LINKS = $CONFIG_LINKS
++ CONFIG_COMMANDS = $CONFIG_COMMANDS
++ $ $0 $@
++
++on `(hostname || uname -n) 2>/dev/null | sed 1q`
++"
++
++_ACEOF
++
++case $ac_config_files in *"
++"*) set x $ac_config_files; shift; ac_config_files=$*;;
++esac
++
++
++
++cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
++# Files that config.status was made for.
++config_files="$ac_config_files"
++config_commands="$ac_config_commands"
++
++_ACEOF
++
++cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1
++ac_cs_usage="\
++\`$as_me' instantiates files and other configuration actions
++from templates according to the current configuration. Unless the files
++and actions are specified as TAGs, all are instantiated by default.
++
++Usage: $0 [OPTION]... [TAG]...
++
++ -h, --help print this help, then exit
++ -V, --version print version number and configuration settings, then exit
++ --config print configuration, then exit
++ -q, --quiet, --silent
++ do not print progress messages
++ -d, --debug don't remove temporary files
++ --recheck update $as_me by reconfiguring in the same conditions
++ --file=FILE[:TEMPLATE]
++ instantiate the configuration file FILE
++
++Configuration files:
++$config_files
++
++Configuration commands:
++$config_commands
++
++Report bugs to the package provider."
++
++_ACEOF
++cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
++ac_cs_config="`$as_echo "$ac_configure_args" | sed 's/^ //; s/[\\""\`\$]/\\\\&/g'`"
++ac_cs_version="\\
++config.status
++configured by $0, generated by GNU Autoconf 2.65,
++ with options \\"\$ac_cs_config\\"
++
++Copyright (C) 2009 Free Software Foundation, Inc.
++This config.status script is free software; the Free Software Foundation
++gives unlimited permission to copy, distribute and modify it."
++
++ac_pwd='$ac_pwd'
++srcdir='$srcdir'
++INSTALL='$INSTALL'
++MKDIR_P='$MKDIR_P'
++AWK='$AWK'
++test -n "\$AWK" || AWK=awk
++_ACEOF
++
++cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1
++# The default lists apply if the user does not specify any file.
++ac_need_defaults=:
++while test $# != 0
++do
++ case $1 in
++ --*=*)
++ ac_option=`expr "X$1" : 'X\([^=]*\)='`
++ ac_optarg=`expr "X$1" : 'X[^=]*=\(.*\)'`
++ ac_shift=:
++ ;;
++ *)
++ ac_option=$1
++ ac_optarg=$2
++ ac_shift=shift
++ ;;
++ esac
++
++ case $ac_option in
++ # Handling of the options.
++ -recheck | --recheck | --rechec | --reche | --rech | --rec | --re | --r)
++ ac_cs_recheck=: ;;
++ --version | --versio | --versi | --vers | --ver | --ve | --v | -V )
++ $as_echo "$ac_cs_version"; exit ;;
++ --config | --confi | --conf | --con | --co | --c )
++ $as_echo "$ac_cs_config"; exit ;;
++ --debug | --debu | --deb | --de | --d | -d )
++ debug=: ;;
++ --file | --fil | --fi | --f )
++ $ac_shift
++ case $ac_optarg in
++ *\'*) ac_optarg=`$as_echo "$ac_optarg" | sed "s/'/'\\\\\\\\''/g"` ;;
++ esac
++ as_fn_append CONFIG_FILES " '$ac_optarg'"
++ ac_need_defaults=false;;
++ --he | --h | --help | --hel | -h )
++ $as_echo "$ac_cs_usage"; exit ;;
++ -q | -quiet | --quiet | --quie | --qui | --qu | --q \
++ | -silent | --silent | --silen | --sile | --sil | --si | --s)
++ ac_cs_silent=: ;;
++
++ # This is an error.
++ -*) as_fn_error "unrecognized option: \`$1'
++Try \`$0 --help' for more information." ;;
++
++ *) as_fn_append ac_config_targets " $1"
++ ac_need_defaults=false ;;
++
++ esac
++ shift
++done
++
++ac_configure_extra_args=
++
++if $ac_cs_silent; then
++ exec 6>/dev/null
++ ac_configure_extra_args="$ac_configure_extra_args --silent"
++fi
++
++_ACEOF
++cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
++if \$ac_cs_recheck; then
++ set X '$SHELL' '$0' $ac_configure_args \$ac_configure_extra_args --no-create --no-recursion
++ shift
++ \$as_echo "running CONFIG_SHELL=$SHELL \$*" >&6
++ CONFIG_SHELL='$SHELL'
++ export CONFIG_SHELL
++ exec "\$@"
++fi
++
++_ACEOF
++cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1
++exec 5>>config.log
++{
++ echo
++ sed 'h;s/./-/g;s/^.../@%:@@%:@ /;s/...$/ @%:@@%:@/;p;x;p;x' <<_ASBOX
++@%:@@%:@ Running $as_me. @%:@@%:@
++_ASBOX
++ $as_echo "$ac_log"
++} >&5
++
++_ACEOF
++cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
++#
++# INIT-COMMANDS
++#
++AMDEP_TRUE="$AMDEP_TRUE" ac_aux_dir="$ac_aux_dir"
++
++
++# The HP-UX ksh and POSIX shell print the target directory to stdout
++# if CDPATH is set.
++(unset CDPATH) >/dev/null 2>&1 && unset CDPATH
++
++sed_quote_subst='$sed_quote_subst'
++double_quote_subst='$double_quote_subst'
++delay_variable_subst='$delay_variable_subst'
++macro_version='`$ECHO "X$macro_version" | $Xsed -e "$delay_single_quote_subst"`'
++macro_revision='`$ECHO "X$macro_revision" | $Xsed -e "$delay_single_quote_subst"`'
++enable_shared='`$ECHO "X$enable_shared" | $Xsed -e "$delay_single_quote_subst"`'
++enable_static='`$ECHO "X$enable_static" | $Xsed -e "$delay_single_quote_subst"`'
++pic_mode='`$ECHO "X$pic_mode" | $Xsed -e "$delay_single_quote_subst"`'
++enable_fast_install='`$ECHO "X$enable_fast_install" | $Xsed -e "$delay_single_quote_subst"`'
++host_alias='`$ECHO "X$host_alias" | $Xsed -e "$delay_single_quote_subst"`'
++host='`$ECHO "X$host" | $Xsed -e "$delay_single_quote_subst"`'
++host_os='`$ECHO "X$host_os" | $Xsed -e "$delay_single_quote_subst"`'
++build_alias='`$ECHO "X$build_alias" | $Xsed -e "$delay_single_quote_subst"`'
++build='`$ECHO "X$build" | $Xsed -e "$delay_single_quote_subst"`'
++build_os='`$ECHO "X$build_os" | $Xsed -e "$delay_single_quote_subst"`'
++SED='`$ECHO "X$SED" | $Xsed -e "$delay_single_quote_subst"`'
++Xsed='`$ECHO "X$Xsed" | $Xsed -e "$delay_single_quote_subst"`'
++GREP='`$ECHO "X$GREP" | $Xsed -e "$delay_single_quote_subst"`'
++EGREP='`$ECHO "X$EGREP" | $Xsed -e "$delay_single_quote_subst"`'
++FGREP='`$ECHO "X$FGREP" | $Xsed -e "$delay_single_quote_subst"`'
++LD='`$ECHO "X$LD" | $Xsed -e "$delay_single_quote_subst"`'
++NM='`$ECHO "X$NM" | $Xsed -e "$delay_single_quote_subst"`'
++LN_S='`$ECHO "X$LN_S" | $Xsed -e "$delay_single_quote_subst"`'
++max_cmd_len='`$ECHO "X$max_cmd_len" | $Xsed -e "$delay_single_quote_subst"`'
++ac_objext='`$ECHO "X$ac_objext" | $Xsed -e "$delay_single_quote_subst"`'
++exeext='`$ECHO "X$exeext" | $Xsed -e "$delay_single_quote_subst"`'
++lt_unset='`$ECHO "X$lt_unset" | $Xsed -e "$delay_single_quote_subst"`'
++lt_SP2NL='`$ECHO "X$lt_SP2NL" | $Xsed -e "$delay_single_quote_subst"`'
++lt_NL2SP='`$ECHO "X$lt_NL2SP" | $Xsed -e "$delay_single_quote_subst"`'
++reload_flag='`$ECHO "X$reload_flag" | $Xsed -e "$delay_single_quote_subst"`'
++reload_cmds='`$ECHO "X$reload_cmds" | $Xsed -e "$delay_single_quote_subst"`'
++OBJDUMP='`$ECHO "X$OBJDUMP" | $Xsed -e "$delay_single_quote_subst"`'
++deplibs_check_method='`$ECHO "X$deplibs_check_method" | $Xsed -e "$delay_single_quote_subst"`'
++file_magic_cmd='`$ECHO "X$file_magic_cmd" | $Xsed -e "$delay_single_quote_subst"`'
++AR='`$ECHO "X$AR" | $Xsed -e "$delay_single_quote_subst"`'
++AR_FLAGS='`$ECHO "X$AR_FLAGS" | $Xsed -e "$delay_single_quote_subst"`'
++STRIP='`$ECHO "X$STRIP" | $Xsed -e "$delay_single_quote_subst"`'
++RANLIB='`$ECHO "X$RANLIB" | $Xsed -e "$delay_single_quote_subst"`'
++old_postinstall_cmds='`$ECHO "X$old_postinstall_cmds" | $Xsed -e "$delay_single_quote_subst"`'
++old_postuninstall_cmds='`$ECHO "X$old_postuninstall_cmds" | $Xsed -e "$delay_single_quote_subst"`'
++old_archive_cmds='`$ECHO "X$old_archive_cmds" | $Xsed -e "$delay_single_quote_subst"`'
++CC='`$ECHO "X$CC" | $Xsed -e "$delay_single_quote_subst"`'
++CFLAGS='`$ECHO "X$CFLAGS" | $Xsed -e "$delay_single_quote_subst"`'
++compiler='`$ECHO "X$compiler" | $Xsed -e "$delay_single_quote_subst"`'
++GCC='`$ECHO "X$GCC" | $Xsed -e "$delay_single_quote_subst"`'
++lt_cv_sys_global_symbol_pipe='`$ECHO "X$lt_cv_sys_global_symbol_pipe" | $Xsed -e "$delay_single_quote_subst"`'
++lt_cv_sys_global_symbol_to_cdecl='`$ECHO "X$lt_cv_sys_global_symbol_to_cdecl" | $Xsed -e "$delay_single_quote_subst"`'
++lt_cv_sys_global_symbol_to_c_name_address='`$ECHO "X$lt_cv_sys_global_symbol_to_c_name_address" | $Xsed -e "$delay_single_quote_subst"`'
++lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='`$ECHO "X$lt_cv_sys_global_symbol_to_c_name_address_lib_prefix" | $Xsed -e "$delay_single_quote_subst"`'
++objdir='`$ECHO "X$objdir" | $Xsed -e "$delay_single_quote_subst"`'
++SHELL='`$ECHO "X$SHELL" | $Xsed -e "$delay_single_quote_subst"`'
++ECHO='`$ECHO "X$ECHO" | $Xsed -e "$delay_single_quote_subst"`'
++MAGIC_CMD='`$ECHO "X$MAGIC_CMD" | $Xsed -e "$delay_single_quote_subst"`'
++lt_prog_compiler_no_builtin_flag='`$ECHO "X$lt_prog_compiler_no_builtin_flag" | $Xsed -e "$delay_single_quote_subst"`'
++lt_prog_compiler_wl='`$ECHO "X$lt_prog_compiler_wl" | $Xsed -e "$delay_single_quote_subst"`'
++lt_prog_compiler_pic='`$ECHO "X$lt_prog_compiler_pic" | $Xsed -e "$delay_single_quote_subst"`'
++lt_prog_compiler_static='`$ECHO "X$lt_prog_compiler_static" | $Xsed -e "$delay_single_quote_subst"`'
++lt_cv_prog_compiler_c_o='`$ECHO "X$lt_cv_prog_compiler_c_o" | $Xsed -e "$delay_single_quote_subst"`'
++need_locks='`$ECHO "X$need_locks" | $Xsed -e "$delay_single_quote_subst"`'
++DSYMUTIL='`$ECHO "X$DSYMUTIL" | $Xsed -e "$delay_single_quote_subst"`'
++NMEDIT='`$ECHO "X$NMEDIT" | $Xsed -e "$delay_single_quote_subst"`'
++LIPO='`$ECHO "X$LIPO" | $Xsed -e "$delay_single_quote_subst"`'
++OTOOL='`$ECHO "X$OTOOL" | $Xsed -e "$delay_single_quote_subst"`'
++OTOOL64='`$ECHO "X$OTOOL64" | $Xsed -e "$delay_single_quote_subst"`'
++libext='`$ECHO "X$libext" | $Xsed -e "$delay_single_quote_subst"`'
++shrext_cmds='`$ECHO "X$shrext_cmds" | $Xsed -e "$delay_single_quote_subst"`'
++extract_expsyms_cmds='`$ECHO "X$extract_expsyms_cmds" | $Xsed -e "$delay_single_quote_subst"`'
++archive_cmds_need_lc='`$ECHO "X$archive_cmds_need_lc" | $Xsed -e "$delay_single_quote_subst"`'
++enable_shared_with_static_runtimes='`$ECHO "X$enable_shared_with_static_runtimes" | $Xsed -e "$delay_single_quote_subst"`'
++export_dynamic_flag_spec='`$ECHO "X$export_dynamic_flag_spec" | $Xsed -e "$delay_single_quote_subst"`'
++whole_archive_flag_spec='`$ECHO "X$whole_archive_flag_spec" | $Xsed -e "$delay_single_quote_subst"`'
++compiler_needs_object='`$ECHO "X$compiler_needs_object" | $Xsed -e "$delay_single_quote_subst"`'
++old_archive_from_new_cmds='`$ECHO "X$old_archive_from_new_cmds" | $Xsed -e "$delay_single_quote_subst"`'
++old_archive_from_expsyms_cmds='`$ECHO "X$old_archive_from_expsyms_cmds" | $Xsed -e "$delay_single_quote_subst"`'
++archive_cmds='`$ECHO "X$archive_cmds" | $Xsed -e "$delay_single_quote_subst"`'
++archive_expsym_cmds='`$ECHO "X$archive_expsym_cmds" | $Xsed -e "$delay_single_quote_subst"`'
++module_cmds='`$ECHO "X$module_cmds" | $Xsed -e "$delay_single_quote_subst"`'
++module_expsym_cmds='`$ECHO "X$module_expsym_cmds" | $Xsed -e "$delay_single_quote_subst"`'
++with_gnu_ld='`$ECHO "X$with_gnu_ld" | $Xsed -e "$delay_single_quote_subst"`'
++allow_undefined_flag='`$ECHO "X$allow_undefined_flag" | $Xsed -e "$delay_single_quote_subst"`'
++no_undefined_flag='`$ECHO "X$no_undefined_flag" | $Xsed -e "$delay_single_quote_subst"`'
++hardcode_libdir_flag_spec='`$ECHO "X$hardcode_libdir_flag_spec" | $Xsed -e "$delay_single_quote_subst"`'
++hardcode_libdir_flag_spec_ld='`$ECHO "X$hardcode_libdir_flag_spec_ld" | $Xsed -e "$delay_single_quote_subst"`'
++hardcode_libdir_separator='`$ECHO "X$hardcode_libdir_separator" | $Xsed -e "$delay_single_quote_subst"`'
++hardcode_direct='`$ECHO "X$hardcode_direct" | $Xsed -e "$delay_single_quote_subst"`'
++hardcode_direct_absolute='`$ECHO "X$hardcode_direct_absolute" | $Xsed -e "$delay_single_quote_subst"`'
++hardcode_minus_L='`$ECHO "X$hardcode_minus_L" | $Xsed -e "$delay_single_quote_subst"`'
++hardcode_shlibpath_var='`$ECHO "X$hardcode_shlibpath_var" | $Xsed -e "$delay_single_quote_subst"`'
++hardcode_automatic='`$ECHO "X$hardcode_automatic" | $Xsed -e "$delay_single_quote_subst"`'
++inherit_rpath='`$ECHO "X$inherit_rpath" | $Xsed -e "$delay_single_quote_subst"`'
++link_all_deplibs='`$ECHO "X$link_all_deplibs" | $Xsed -e "$delay_single_quote_subst"`'
++fix_srcfile_path='`$ECHO "X$fix_srcfile_path" | $Xsed -e "$delay_single_quote_subst"`'
++always_export_symbols='`$ECHO "X$always_export_symbols" | $Xsed -e "$delay_single_quote_subst"`'
++export_symbols_cmds='`$ECHO "X$export_symbols_cmds" | $Xsed -e "$delay_single_quote_subst"`'
++exclude_expsyms='`$ECHO "X$exclude_expsyms" | $Xsed -e "$delay_single_quote_subst"`'
++include_expsyms='`$ECHO "X$include_expsyms" | $Xsed -e "$delay_single_quote_subst"`'
++prelink_cmds='`$ECHO "X$prelink_cmds" | $Xsed -e "$delay_single_quote_subst"`'
++file_list_spec='`$ECHO "X$file_list_spec" | $Xsed -e "$delay_single_quote_subst"`'
++variables_saved_for_relink='`$ECHO "X$variables_saved_for_relink" | $Xsed -e "$delay_single_quote_subst"`'
++need_lib_prefix='`$ECHO "X$need_lib_prefix" | $Xsed -e "$delay_single_quote_subst"`'
++need_version='`$ECHO "X$need_version" | $Xsed -e "$delay_single_quote_subst"`'
++version_type='`$ECHO "X$version_type" | $Xsed -e "$delay_single_quote_subst"`'
++runpath_var='`$ECHO "X$runpath_var" | $Xsed -e "$delay_single_quote_subst"`'
++shlibpath_var='`$ECHO "X$shlibpath_var" | $Xsed -e "$delay_single_quote_subst"`'
++shlibpath_overrides_runpath='`$ECHO "X$shlibpath_overrides_runpath" | $Xsed -e "$delay_single_quote_subst"`'
++libname_spec='`$ECHO "X$libname_spec" | $Xsed -e "$delay_single_quote_subst"`'
++library_names_spec='`$ECHO "X$library_names_spec" | $Xsed -e "$delay_single_quote_subst"`'
++soname_spec='`$ECHO "X$soname_spec" | $Xsed -e "$delay_single_quote_subst"`'
++postinstall_cmds='`$ECHO "X$postinstall_cmds" | $Xsed -e "$delay_single_quote_subst"`'
++postuninstall_cmds='`$ECHO "X$postuninstall_cmds" | $Xsed -e "$delay_single_quote_subst"`'
++finish_cmds='`$ECHO "X$finish_cmds" | $Xsed -e "$delay_single_quote_subst"`'
++finish_eval='`$ECHO "X$finish_eval" | $Xsed -e "$delay_single_quote_subst"`'
++hardcode_into_libs='`$ECHO "X$hardcode_into_libs" | $Xsed -e "$delay_single_quote_subst"`'
++sys_lib_search_path_spec='`$ECHO "X$sys_lib_search_path_spec" | $Xsed -e "$delay_single_quote_subst"`'
++sys_lib_dlsearch_path_spec='`$ECHO "X$sys_lib_dlsearch_path_spec" | $Xsed -e "$delay_single_quote_subst"`'
++hardcode_action='`$ECHO "X$hardcode_action" | $Xsed -e "$delay_single_quote_subst"`'
++enable_dlopen='`$ECHO "X$enable_dlopen" | $Xsed -e "$delay_single_quote_subst"`'
++enable_dlopen_self='`$ECHO "X$enable_dlopen_self" | $Xsed -e "$delay_single_quote_subst"`'
++enable_dlopen_self_static='`$ECHO "X$enable_dlopen_self_static" | $Xsed -e "$delay_single_quote_subst"`'
++old_striplib='`$ECHO "X$old_striplib" | $Xsed -e "$delay_single_quote_subst"`'
++striplib='`$ECHO "X$striplib" | $Xsed -e "$delay_single_quote_subst"`'
++
++LTCC='$LTCC'
++LTCFLAGS='$LTCFLAGS'
++compiler='$compiler_DEFAULT'
++
++# Quote evaled strings.
++for var in SED \
++GREP \
++EGREP \
++FGREP \
++LD \
++NM \
++LN_S \
++lt_SP2NL \
++lt_NL2SP \
++reload_flag \
++OBJDUMP \
++deplibs_check_method \
++file_magic_cmd \
++AR \
++AR_FLAGS \
++STRIP \
++RANLIB \
++CC \
++CFLAGS \
++compiler \
++lt_cv_sys_global_symbol_pipe \
++lt_cv_sys_global_symbol_to_cdecl \
++lt_cv_sys_global_symbol_to_c_name_address \
++lt_cv_sys_global_symbol_to_c_name_address_lib_prefix \
++SHELL \
++ECHO \
++lt_prog_compiler_no_builtin_flag \
++lt_prog_compiler_wl \
++lt_prog_compiler_pic \
++lt_prog_compiler_static \
++lt_cv_prog_compiler_c_o \
++need_locks \
++DSYMUTIL \
++NMEDIT \
++LIPO \
++OTOOL \
++OTOOL64 \
++shrext_cmds \
++export_dynamic_flag_spec \
++whole_archive_flag_spec \
++compiler_needs_object \
++with_gnu_ld \
++allow_undefined_flag \
++no_undefined_flag \
++hardcode_libdir_flag_spec \
++hardcode_libdir_flag_spec_ld \
++hardcode_libdir_separator \
++fix_srcfile_path \
++exclude_expsyms \
++include_expsyms \
++file_list_spec \
++variables_saved_for_relink \
++libname_spec \
++library_names_spec \
++soname_spec \
++finish_eval \
++old_striplib \
++striplib; do
++ case \`eval \\\\\$ECHO "X\\\\\$\$var"\` in
++ *[\\\\\\\`\\"\\\$]*)
++ eval "lt_\$var=\\\\\\"\\\`\\\$ECHO \\"X\\\$\$var\\" | \\\$Xsed -e \\"\\\$sed_quote_subst\\"\\\`\\\\\\""
++ ;;
++ *)
++ eval "lt_\$var=\\\\\\"\\\$\$var\\\\\\""
++ ;;
++ esac
++done
++
++# Double-quote double-evaled strings.
++for var in reload_cmds \
++old_postinstall_cmds \
++old_postuninstall_cmds \
++old_archive_cmds \
++extract_expsyms_cmds \
++old_archive_from_new_cmds \
++old_archive_from_expsyms_cmds \
++archive_cmds \
++archive_expsym_cmds \
++module_cmds \
++module_expsym_cmds \
++export_symbols_cmds \
++prelink_cmds \
++postinstall_cmds \
++postuninstall_cmds \
++finish_cmds \
++sys_lib_search_path_spec \
++sys_lib_dlsearch_path_spec; do
++ case \`eval \\\\\$ECHO "X\\\\\$\$var"\` in
++ *[\\\\\\\`\\"\\\$]*)
++ eval "lt_\$var=\\\\\\"\\\`\\\$ECHO \\"X\\\$\$var\\" | \\\$Xsed -e \\"\\\$double_quote_subst\\" -e \\"\\\$sed_quote_subst\\" -e \\"\\\$delay_variable_subst\\"\\\`\\\\\\""
++ ;;
++ *)
++ eval "lt_\$var=\\\\\\"\\\$\$var\\\\\\""
++ ;;
++ esac
++done
++
++# Fix-up fallback echo if it was mangled by the above quoting rules.
++case \$lt_ECHO in
++*'\\\$0 --fallback-echo"') lt_ECHO=\`\$ECHO "X\$lt_ECHO" | \$Xsed -e 's/\\\\\\\\\\\\\\\$0 --fallback-echo"\$/\$0 --fallback-echo"/'\`
++ ;;
++esac
++
++ac_aux_dir='$ac_aux_dir'
++xsi_shell='$xsi_shell'
++lt_shell_append='$lt_shell_append'
++
++# See if we are running on zsh, and set the options which allow our
++# commands through without removal of \ escapes INIT.
++if test -n "\${ZSH_VERSION+set}" ; then
++ setopt NO_GLOB_SUBST
++fi
++
++
++ PACKAGE='$PACKAGE'
++ VERSION='$VERSION'
++ TIMESTAMP='$TIMESTAMP'
++ RM='$RM'
++ ofile='$ofile'
++
++
++
++
++_ACEOF
++
++cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1
++
++# Handling of arguments.
++for ac_config_target in $ac_config_targets
++do
++ case $ac_config_target in
++ "depfiles") CONFIG_COMMANDS="$CONFIG_COMMANDS depfiles" ;;
++ "libtool") CONFIG_COMMANDS="$CONFIG_COMMANDS libtool" ;;
++ "nucleus/Makefile") CONFIG_FILES="$CONFIG_FILES nucleus/Makefile" ;;
++ "ajax/Makefile") CONFIG_FILES="$CONFIG_FILES ajax/Makefile" ;;
++ "ajax/core/Makefile") CONFIG_FILES="$CONFIG_FILES ajax/core/Makefile" ;;
++ "ajax/graphics/Makefile") CONFIG_FILES="$CONFIG_FILES ajax/graphics/Makefile" ;;
++ "ajax/ensembl/Makefile") CONFIG_FILES="$CONFIG_FILES ajax/ensembl/Makefile" ;;
++ "ajax/ajaxdb/Makefile") CONFIG_FILES="$CONFIG_FILES ajax/ajaxdb/Makefile" ;;
++ "ajax/acd/Makefile") CONFIG_FILES="$CONFIG_FILES ajax/acd/Makefile" ;;
++ "emboss/Makefile") CONFIG_FILES="$CONFIG_FILES emboss/Makefile" ;;
++ "emboss/acd/Makefile") CONFIG_FILES="$CONFIG_FILES emboss/acd/Makefile" ;;
++ "test/Makefile") CONFIG_FILES="$CONFIG_FILES test/Makefile" ;;
++ "test/data/Makefile") CONFIG_FILES="$CONFIG_FILES test/data/Makefile" ;;
++ "test/embl/Makefile") CONFIG_FILES="$CONFIG_FILES test/embl/Makefile" ;;
++ "test/genbank/Makefile") CONFIG_FILES="$CONFIG_FILES test/genbank/Makefile" ;;
++ "test/pir/Makefile") CONFIG_FILES="$CONFIG_FILES test/pir/Makefile" ;;
++ "test/swiss/Makefile") CONFIG_FILES="$CONFIG_FILES test/swiss/Makefile" ;;
++ "test/swnew/Makefile") CONFIG_FILES="$CONFIG_FILES test/swnew/Makefile" ;;
++ "test/testdb/Makefile") CONFIG_FILES="$CONFIG_FILES test/testdb/Makefile" ;;
++ "emboss/data/Makefile") CONFIG_FILES="$CONFIG_FILES emboss/data/Makefile" ;;
++ "emboss/data/AAINDEX/Makefile") CONFIG_FILES="$CONFIG_FILES emboss/data/AAINDEX/Makefile" ;;
++ "emboss/data/CODONS/Makefile") CONFIG_FILES="$CONFIG_FILES emboss/data/CODONS/Makefile" ;;
++ "emboss/data/REBASE/Makefile") CONFIG_FILES="$CONFIG_FILES emboss/data/REBASE/Makefile" ;;
++ "emboss/data/JASPAR_CORE/Makefile") CONFIG_FILES="$CONFIG_FILES emboss/data/JASPAR_CORE/Makefile" ;;
++ "emboss/data/JASPAR_FAM/Makefile") CONFIG_FILES="$CONFIG_FILES emboss/data/JASPAR_FAM/Makefile" ;;
++ "emboss/data/JASPAR_PHYLOFACTS/Makefile") CONFIG_FILES="$CONFIG_FILES emboss/data/JASPAR_PHYLOFACTS/Makefile" ;;
++ "emboss/data/JASPAR_CNE/Makefile") CONFIG_FILES="$CONFIG_FILES emboss/data/JASPAR_CNE/Makefile" ;;
++ "emboss/data/JASPAR_POLII/Makefile") CONFIG_FILES="$CONFIG_FILES emboss/data/JASPAR_POLII/Makefile" ;;
++ "emboss/data/JASPAR_SPLICE/Makefile") CONFIG_FILES="$CONFIG_FILES emboss/data/JASPAR_SPLICE/Makefile" ;;
++ "emboss/data/JASPAR_PBM/Makefile") CONFIG_FILES="$CONFIG_FILES emboss/data/JASPAR_PBM/Makefile" ;;
++ "emboss/data/JASPAR_PBM_HLH/Makefile") CONFIG_FILES="$CONFIG_FILES emboss/data/JASPAR_PBM_HLH/Makefile" ;;
++ "emboss/data/JASPAR_PBM_HOMEO/Makefile") CONFIG_FILES="$CONFIG_FILES emboss/data/JASPAR_PBM_HOMEO/Makefile" ;;
++ "emboss/data/PRINTS/Makefile") CONFIG_FILES="$CONFIG_FILES emboss/data/PRINTS/Makefile" ;;
++ "emboss/data/PROSITE/Makefile") CONFIG_FILES="$CONFIG_FILES emboss/data/PROSITE/Makefile" ;;
++ "doc/Makefile") CONFIG_FILES="$CONFIG_FILES doc/Makefile" ;;
++ "doc/manuals/Makefile") CONFIG_FILES="$CONFIG_FILES doc/manuals/Makefile" ;;
++ "doc/tutorials/Makefile") CONFIG_FILES="$CONFIG_FILES doc/tutorials/Makefile" ;;
++ "doc/programs/Makefile") CONFIG_FILES="$CONFIG_FILES doc/programs/Makefile" ;;
++ "doc/programs/html/Makefile") CONFIG_FILES="$CONFIG_FILES doc/programs/html/Makefile" ;;
++ "doc/programs/text/Makefile") CONFIG_FILES="$CONFIG_FILES doc/programs/text/Makefile" ;;
++ "jemboss/Makefile") CONFIG_FILES="$CONFIG_FILES jemboss/Makefile" ;;
++ "jemboss/images/Makefile") CONFIG_FILES="$CONFIG_FILES jemboss/images/Makefile" ;;
++ "jemboss/lib/Makefile") CONFIG_FILES="$CONFIG_FILES jemboss/lib/Makefile" ;;
++ "jemboss/lib/axis/Makefile") CONFIG_FILES="$CONFIG_FILES jemboss/lib/axis/Makefile" ;;
++ "jemboss/resources/Makefile") CONFIG_FILES="$CONFIG_FILES jemboss/resources/Makefile" ;;
++ "jemboss/utils/Makefile") CONFIG_FILES="$CONFIG_FILES jemboss/utils/Makefile" ;;
++ "Makefile") CONFIG_FILES="$CONFIG_FILES Makefile" ;;
++
++ *) as_fn_error "invalid argument: \`$ac_config_target'" "$LINENO" 5;;
++ esac
++done
++
++
++# If the user did not use the arguments to specify the items to instantiate,
++# then the envvar interface is used. Set only those that are not.
++# We use the long form for the default assignment because of an extremely
++# bizarre bug on SunOS 4.1.3.
++if $ac_need_defaults; then
++ test "${CONFIG_FILES+set}" = set || CONFIG_FILES=$config_files
++ test "${CONFIG_COMMANDS+set}" = set || CONFIG_COMMANDS=$config_commands
++fi
++
++# Have a temporary directory for convenience. Make it in the build tree
++# simply because there is no reason against having it here, and in addition,
++# creating and moving files from /tmp can sometimes cause problems.
++# Hook for its removal unless debugging.
++# Note that there is a small window in which the directory will not be cleaned:
++# after its creation but before its name has been assigned to `$tmp'.
++$debug ||
++{
++ tmp=
++ trap 'exit_status=$?
++ { test -z "$tmp" || test ! -d "$tmp" || rm -fr "$tmp"; } && exit $exit_status
++' 0
++ trap 'as_fn_exit 1' 1 2 13 15
++}
++# Create a (secure) tmp directory for tmp files.
++
++{
++ tmp=`(umask 077 && mktemp -d "./confXXXXXX") 2>/dev/null` &&
++ test -n "$tmp" && test -d "$tmp"
++} ||
++{
++ tmp=./conf$$-$RANDOM
++ (umask 077 && mkdir "$tmp")
++} || as_fn_error "cannot create a temporary directory in ." "$LINENO" 5
++
++# Set up the scripts for CONFIG_FILES section.
++# No need to generate them if there are no CONFIG_FILES.
++# This happens for instance with `./config.status config.h'.
++if test -n "$CONFIG_FILES"; then
++
++
++ac_cr=`echo X | tr X '\015'`
++# On cygwin, bash can eat \r inside `` if the user requested igncr.
++# But we know of no other shell where ac_cr would be empty at this
++# point, so we can use a bashism as a fallback.
++if test "x$ac_cr" = x; then
++ eval ac_cr=\$\'\\r\'
++fi
++ac_cs_awk_cr=`$AWK 'BEGIN { print "a\rb" }' </dev/null 2>/dev/null`
++if test "$ac_cs_awk_cr" = "a${ac_cr}b"; then
++ ac_cs_awk_cr='\r'
++else
++ ac_cs_awk_cr=$ac_cr
++fi
++
++echo 'BEGIN {' >"$tmp/subs1.awk" &&
++_ACEOF
++
++
++{
++ echo "cat >conf$$subs.awk <<_ACEOF" &&
++ echo "$ac_subst_vars" | sed 's/.*/&!$&$ac_delim/' &&
++ echo "_ACEOF"
++} >conf$$subs.sh ||
++ as_fn_error "could not make $CONFIG_STATUS" "$LINENO" 5
++ac_delim_num=`echo "$ac_subst_vars" | grep -c '$'`
++ac_delim='%!_!# '
++for ac_last_try in false false false false false :; do
++ . ./conf$$subs.sh ||
++ as_fn_error "could not make $CONFIG_STATUS" "$LINENO" 5
++
++ ac_delim_n=`sed -n "s/.*$ac_delim\$/X/p" conf$$subs.awk | grep -c X`
++ if test $ac_delim_n = $ac_delim_num; then
++ break
++ elif $ac_last_try; then
++ as_fn_error "could not make $CONFIG_STATUS" "$LINENO" 5
++ else
++ ac_delim="$ac_delim!$ac_delim _$ac_delim!! "
++ fi
++done
++rm -f conf$$subs.sh
++
++cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
++cat >>"\$tmp/subs1.awk" <<\\_ACAWK &&
++_ACEOF
++sed -n '
++h
++s/^/S["/; s/!.*/"]=/
++p
++g
++s/^[^!]*!//
++:repl
++t repl
++s/'"$ac_delim"'$//
++t delim
++:nl
++h
++s/\(.\{148\}\)..*/\1/
++t more1
++s/["\\]/\\&/g; s/^/"/; s/$/\\n"\\/
++p
++n
++b repl
++:more1
++s/["\\]/\\&/g; s/^/"/; s/$/"\\/
++p
++g
++s/.\{148\}//
++t nl
++:delim
++h
++s/\(.\{148\}\)..*/\1/
++t more2
++s/["\\]/\\&/g; s/^/"/; s/$/"/
++p
++b
++:more2
++s/["\\]/\\&/g; s/^/"/; s/$/"\\/
++p
++g
++s/.\{148\}//
++t delim
++' <conf$$subs.awk | sed '
++/^[^""]/{
++ N
++ s/\n//
++}
++' >>$CONFIG_STATUS || ac_write_fail=1
++rm -f conf$$subs.awk
++cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
++_ACAWK
++cat >>"\$tmp/subs1.awk" <<_ACAWK &&
++ for (key in S) S_is_set[key] = 1
++ FS = ""
++
++}
++{
++ line = $ 0
++ nfields = split(line, field, "@")
++ substed = 0
++ len = length(field[1])
++ for (i = 2; i < nfields; i++) {
++ key = field[i]
++ keylen = length(key)
++ if (S_is_set[key]) {
++ value = S[key]
++ line = substr(line, 1, len) "" value "" substr(line, len + keylen + 3)
++ len += length(value) + length(field[++i])
++ substed = 1
++ } else
++ len += 1 + keylen
++ }
++
++ print line
++}
++
++_ACAWK
++_ACEOF
++cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1
++if sed "s/$ac_cr//" < /dev/null > /dev/null 2>&1; then
++ sed "s/$ac_cr\$//; s/$ac_cr/$ac_cs_awk_cr/g"
++else
++ cat
++fi < "$tmp/subs1.awk" > "$tmp/subs.awk" \
++ || as_fn_error "could not setup config files machinery" "$LINENO" 5
++_ACEOF
++
++# VPATH may cause trouble with some makes, so we remove $(srcdir),
++# ${srcdir} and @srcdir@ from VPATH if srcdir is ".", strip leading and
++# trailing colons and then remove the whole line if VPATH becomes empty
++# (actually we leave an empty line to preserve line numbers).
++if test "x$srcdir" = x.; then
++ ac_vpsub='/^[ ]*VPATH[ ]*=/{
++s/:*\$(srcdir):*/:/
++s/:*\${srcdir}:*/:/
++s/:*@srcdir@:*/:/
++s/^\([^=]*=[ ]*\):*/\1/
++s/:*$//
++s/^[^=]*=[ ]*$//
++}'
++fi
++
++cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1
++fi # test -n "$CONFIG_FILES"
++
++
++eval set X " :F $CONFIG_FILES :C $CONFIG_COMMANDS"
++shift
++for ac_tag
++do
++ case $ac_tag in
++ :[FHLC]) ac_mode=$ac_tag; continue;;
++ esac
++ case $ac_mode$ac_tag in
++ :[FHL]*:*);;
++ :L* | :C*:*) as_fn_error "invalid tag \`$ac_tag'" "$LINENO" 5;;
++ :[FH]-) ac_tag=-:-;;
++ :[FH]*) ac_tag=$ac_tag:$ac_tag.in;;
++ esac
++ ac_save_IFS=$IFS
++ IFS=:
++ set x $ac_tag
++ IFS=$ac_save_IFS
++ shift
++ ac_file=$1
++ shift
++
++ case $ac_mode in
++ :L) ac_source=$1;;
++ :[FH])
++ ac_file_inputs=
++ for ac_f
++ do
++ case $ac_f in
++ -) ac_f="$tmp/stdin";;
++ *) # Look for the file first in the build tree, then in the source tree
++ # (if the path is not absolute). The absolute path cannot be DOS-style,
++ # because $ac_f cannot contain `:'.
++ test -f "$ac_f" ||
++ case $ac_f in
++ [\\/$]*) false;;
++ *) test -f "$srcdir/$ac_f" && ac_f="$srcdir/$ac_f";;
++ esac ||
++ as_fn_error "cannot find input file: \`$ac_f'" "$LINENO" 5;;
++ esac
++ case $ac_f in *\'*) ac_f=`$as_echo "$ac_f" | sed "s/'/'\\\\\\\\''/g"`;; esac
++ as_fn_append ac_file_inputs " '$ac_f'"
++ done
++
++ # Let's still pretend it is `configure' which instantiates (i.e., don't
++ # use $as_me), people would be surprised to read:
++ # /* config.h. Generated by config.status. */
++ configure_input='Generated from '`
++ $as_echo "$*" | sed 's|^[^:]*/||;s|:[^:]*/|, |g'
++ `' by configure.'
++ if test x"$ac_file" != x-; then
++ configure_input="$ac_file. $configure_input"
++ { $as_echo "$as_me:${as_lineno-$LINENO}: creating $ac_file" >&5
++$as_echo "$as_me: creating $ac_file" >&6;}
++ fi
++ # Neutralize special characters interpreted by sed in replacement strings.
++ case $configure_input in #(
++ *\&* | *\|* | *\\* )
++ ac_sed_conf_input=`$as_echo "$configure_input" |
++ sed 's/[\\\\&|]/\\\\&/g'`;; #(
++ *) ac_sed_conf_input=$configure_input;;
++ esac
++
++ case $ac_tag in
++ *:-:* | *:-) cat >"$tmp/stdin" \
++ || as_fn_error "could not create $ac_file" "$LINENO" 5 ;;
++ esac
++ ;;
++ esac
++
++ ac_dir=`$as_dirname -- "$ac_file" ||
++$as_expr X"$ac_file" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
++ X"$ac_file" : 'X\(//\)[^/]' \| \
++ X"$ac_file" : 'X\(//\)$' \| \
++ X"$ac_file" : 'X\(/\)' \| . 2>/dev/null ||
++$as_echo X"$ac_file" |
++ sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{
++ s//\1/
++ q
++ }
++ /^X\(\/\/\)[^/].*/{
++ s//\1/
++ q
++ }
++ /^X\(\/\/\)$/{
++ s//\1/
++ q
++ }
++ /^X\(\/\).*/{
++ s//\1/
++ q
++ }
++ s/.*/./; q'`
++ as_dir="$ac_dir"; as_fn_mkdir_p
++ ac_builddir=.
++
++case "$ac_dir" in
++.) ac_dir_suffix= ac_top_builddir_sub=. ac_top_build_prefix= ;;
++*)
++ ac_dir_suffix=/`$as_echo "$ac_dir" | sed 's|^\.[\\/]||'`
++ # A ".." for each directory in $ac_dir_suffix.
++ ac_top_builddir_sub=`$as_echo "$ac_dir_suffix" | sed 's|/[^\\/]*|/..|g;s|/||'`
++ case $ac_top_builddir_sub in
++ "") ac_top_builddir_sub=. ac_top_build_prefix= ;;
++ *) ac_top_build_prefix=$ac_top_builddir_sub/ ;;
++ esac ;;
++esac
++ac_abs_top_builddir=$ac_pwd
++ac_abs_builddir=$ac_pwd$ac_dir_suffix
++# for backward compatibility:
++ac_top_builddir=$ac_top_build_prefix
++
++case $srcdir in
++ .) # We are building in place.
++ ac_srcdir=.
++ ac_top_srcdir=$ac_top_builddir_sub
++ ac_abs_top_srcdir=$ac_pwd ;;
++ [\\/]* | ?:[\\/]* ) # Absolute name.
++ ac_srcdir=$srcdir$ac_dir_suffix;
++ ac_top_srcdir=$srcdir
++ ac_abs_top_srcdir=$srcdir ;;
++ *) # Relative name.
++ ac_srcdir=$ac_top_build_prefix$srcdir$ac_dir_suffix
++ ac_top_srcdir=$ac_top_build_prefix$srcdir
++ ac_abs_top_srcdir=$ac_pwd/$srcdir ;;
++esac
++ac_abs_srcdir=$ac_abs_top_srcdir$ac_dir_suffix
++
++
++ case $ac_mode in
++ :F)
++ #
++ # CONFIG_FILE
++ #
++
++ case $INSTALL in
++ [\\/$]* | ?:[\\/]* ) ac_INSTALL=$INSTALL ;;
++ *) ac_INSTALL=$ac_top_build_prefix$INSTALL ;;
++ esac
++ ac_MKDIR_P=$MKDIR_P
++ case $MKDIR_P in
++ [\\/$]* | ?:[\\/]* ) ;;
++ */*) ac_MKDIR_P=$ac_top_build_prefix$MKDIR_P ;;
++ esac
++_ACEOF
++
++cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1
++# If the template does not know about datarootdir, expand it.
++# FIXME: This hack should be removed a few years after 2.60.
++ac_datarootdir_hack=; ac_datarootdir_seen=
++ac_sed_dataroot='
++/datarootdir/ {
++ p
++ q
++}
++/@datadir@/p
++/@docdir@/p
++/@infodir@/p
++/@localedir@/p
++/@mandir@/p'
++case `eval "sed -n \"\$ac_sed_dataroot\" $ac_file_inputs"` in
++*datarootdir*) ac_datarootdir_seen=yes;;
++*@datadir@*|*@docdir@*|*@infodir@*|*@localedir@*|*@mandir@*)
++ { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $ac_file_inputs seems to ignore the --datarootdir setting" >&5
++$as_echo "$as_me: WARNING: $ac_file_inputs seems to ignore the --datarootdir setting" >&2;}
++_ACEOF
++cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
++ ac_datarootdir_hack='
++ s&@datadir@&$datadir&g
++ s&@docdir@&$docdir&g
++ s&@infodir@&$infodir&g
++ s&@localedir@&$localedir&g
++ s&@mandir@&$mandir&g
++ s&\\\${datarootdir}&$datarootdir&g' ;;
++esac
++_ACEOF
++
++# Neutralize VPATH when `$srcdir' = `.'.
++# Shell code in configure.ac might set extrasub.
++# FIXME: do we really want to maintain this feature?
++cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
++ac_sed_extra="$ac_vpsub
++$extrasub
++_ACEOF
++cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1
++:t
++/@[a-zA-Z_][a-zA-Z_0-9]*@/!b
++s|@configure_input@|$ac_sed_conf_input|;t t
++s&@top_builddir@&$ac_top_builddir_sub&;t t
++s&@top_build_prefix@&$ac_top_build_prefix&;t t
++s&@srcdir@&$ac_srcdir&;t t
++s&@abs_srcdir@&$ac_abs_srcdir&;t t
++s&@top_srcdir@&$ac_top_srcdir&;t t
++s&@abs_top_srcdir@&$ac_abs_top_srcdir&;t t
++s&@builddir@&$ac_builddir&;t t
++s&@abs_builddir@&$ac_abs_builddir&;t t
++s&@abs_top_builddir@&$ac_abs_top_builddir&;t t
++s&@INSTALL@&$ac_INSTALL&;t t
++s&@MKDIR_P@&$ac_MKDIR_P&;t t
++$ac_datarootdir_hack
++"
++eval sed \"\$ac_sed_extra\" "$ac_file_inputs" | $AWK -f "$tmp/subs.awk" >$tmp/out \
++ || as_fn_error "could not create $ac_file" "$LINENO" 5
++
++test -z "$ac_datarootdir_hack$ac_datarootdir_seen" &&
++ { ac_out=`sed -n '/\${datarootdir}/p' "$tmp/out"`; test -n "$ac_out"; } &&
++ { ac_out=`sed -n '/^[ ]*datarootdir[ ]*:*=/p' "$tmp/out"`; test -z "$ac_out"; } &&
++ { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: $ac_file contains a reference to the variable \`datarootdir'
++which seems to be undefined. Please make sure it is defined." >&5
++$as_echo "$as_me: WARNING: $ac_file contains a reference to the variable \`datarootdir'
++which seems to be undefined. Please make sure it is defined." >&2;}
++
++ rm -f "$tmp/stdin"
++ case $ac_file in
++ -) cat "$tmp/out" && rm -f "$tmp/out";;
++ *) rm -f "$ac_file" && mv "$tmp/out" "$ac_file";;
++ esac \
++ || as_fn_error "could not create $ac_file" "$LINENO" 5
++ ;;
++
++
++ :C) { $as_echo "$as_me:${as_lineno-$LINENO}: executing $ac_file commands" >&5
++$as_echo "$as_me: executing $ac_file commands" >&6;}
++ ;;
++ esac
++
++
++ case $ac_file$ac_mode in
++ "depfiles":C) test x"$AMDEP_TRUE" != x"" || {
++ # Autoconf 2.62 quotes --file arguments for eval, but not when files
++ # are listed without --file. Let's play safe and only enable the eval
++ # if we detect the quoting.
++ case $CONFIG_FILES in
++ *\'*) eval set x "$CONFIG_FILES" ;;
++ *) set x $CONFIG_FILES ;;
++ esac
++ shift
++ for mf
++ do
++ # Strip MF so we end up with the name of the file.
++ mf=`echo "$mf" | sed -e 's/:.*$//'`
++ # Check whether this is an Automake generated Makefile or not.
++ # We used to match only the files named `Makefile.in', but
++ # some people rename them; so instead we look at the file content.
++ # Grep'ing the first line is not enough: some people post-process
++ # each Makefile.in and add a new line on top of each file to say so.
++ # Grep'ing the whole file is not good either: AIX grep has a line
++ # limit of 2048, but all sed's we know have understand at least 4000.
++ if sed -n 's,^#.*generated by automake.*,X,p' "$mf" | grep X >/dev/null 2>&1; then
++ dirpart=`$as_dirname -- "$mf" ||
++$as_expr X"$mf" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
++ X"$mf" : 'X\(//\)[^/]' \| \
++ X"$mf" : 'X\(//\)$' \| \
++ X"$mf" : 'X\(/\)' \| . 2>/dev/null ||
++$as_echo X"$mf" |
++ sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{
++ s//\1/
++ q
++ }
++ /^X\(\/\/\)[^/].*/{
++ s//\1/
++ q
++ }
++ /^X\(\/\/\)$/{
++ s//\1/
++ q
++ }
++ /^X\(\/\).*/{
++ s//\1/
++ q
++ }
++ s/.*/./; q'`
++ else
++ continue
++ fi
++ # Extract the definition of DEPDIR, am__include, and am__quote
++ # from the Makefile without running `make'.
++ DEPDIR=`sed -n 's/^DEPDIR = //p' < "$mf"`
++ test -z "$DEPDIR" && continue
++ am__include=`sed -n 's/^am__include = //p' < "$mf"`
++ test -z "am__include" && continue
++ am__quote=`sed -n 's/^am__quote = //p' < "$mf"`
++ # When using ansi2knr, U may be empty or an underscore; expand it
++ U=`sed -n 's/^U = //p' < "$mf"`
++ # Find all dependency output files, they are included files with
++ # $(DEPDIR) in their names. We invoke sed twice because it is the
++ # simplest approach to changing $(DEPDIR) to its actual value in the
++ # expansion.
++ for file in `sed -n "
++ s/^$am__include $am__quote\(.*(DEPDIR).*\)$am__quote"'$/\1/p' <"$mf" | \
++ sed -e 's/\$(DEPDIR)/'"$DEPDIR"'/g' -e 's/\$U/'"$U"'/g'`; do
++ # Make sure the directory exists.
++ test -f "$dirpart/$file" && continue
++ fdir=`$as_dirname -- "$file" ||
++$as_expr X"$file" : 'X\(.*[^/]\)//*[^/][^/]*/*$' \| \
++ X"$file" : 'X\(//\)[^/]' \| \
++ X"$file" : 'X\(//\)$' \| \
++ X"$file" : 'X\(/\)' \| . 2>/dev/null ||
++$as_echo X"$file" |
++ sed '/^X\(.*[^/]\)\/\/*[^/][^/]*\/*$/{
++ s//\1/
++ q
++ }
++ /^X\(\/\/\)[^/].*/{
++ s//\1/
++ q
++ }
++ /^X\(\/\/\)$/{
++ s//\1/
++ q
++ }
++ /^X\(\/\).*/{
++ s//\1/
++ q
++ }
++ s/.*/./; q'`
++ as_dir=$dirpart/$fdir; as_fn_mkdir_p
++ # echo "creating $dirpart/$file"
++ echo '# dummy' > "$dirpart/$file"
++ done
++ done
++}
++ ;;
++ "libtool":C)
++
++ # See if we are running on zsh, and set the options which allow our
++ # commands through without removal of \ escapes.
++ if test -n "${ZSH_VERSION+set}" ; then
++ setopt NO_GLOB_SUBST
++ fi
++
++ cfgfile="${ofile}T"
++ trap "$RM \"$cfgfile\"; exit 1" 1 2 15
++ $RM "$cfgfile"
++
++ cat <<_LT_EOF >> "$cfgfile"
++#! $SHELL
++
++# `$ECHO "$ofile" | sed 's%^.*/%%'` - Provide generalized library-building support services.
++# Generated automatically by $as_me ($PACKAGE$TIMESTAMP) $VERSION
++# Libtool was configured on host `(hostname || uname -n) 2>/dev/null | sed 1q`:
++# NOTE: Changes made to this file will be lost: look at ltmain.sh.
++#
++# Copyright (C) 1996, 1997, 1998, 1999, 2000, 2001, 2003, 2004, 2005,
++# 2006, 2007, 2008 Free Software Foundation, Inc.
++# Written by Gordon Matzigkeit, 1996
++#
++# This file is part of GNU Libtool.
++#
++# GNU Libtool is free software; you can redistribute it and/or
++# modify it under the terms of the GNU General Public License as
++# published by the Free Software Foundation; either version 2 of
++# the License, or (at your option) any later version.
++#
++# As a special exception to the GNU General Public License,
++# if you distribute this file as part of a program or library that
++# is built using GNU Libtool, you may include this file under the
++# same distribution terms that you use for the rest of that program.
++#
++# GNU Libtool is distributed in the hope that it will be useful,
++# but WITHOUT ANY WARRANTY; without even the implied warranty of
++# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
++# GNU General Public License for more details.
++#
++# You should have received a copy of the GNU General Public License
++# along with GNU Libtool; see the file COPYING. If not, a copy
++# can be downloaded from http://www.gnu.org/licenses/gpl.html, or
++# obtained by writing to the Free Software Foundation, Inc.,
++# 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA.
++
++
++# The names of the tagged configurations supported by this script.
++available_tags=""
++
++# ### BEGIN LIBTOOL CONFIG
++
++# Which release of libtool.m4 was used?
++macro_version=$macro_version
++macro_revision=$macro_revision
++
++# Whether or not to build shared libraries.
++build_libtool_libs=$enable_shared
++
++# Whether or not to build static libraries.
++build_old_libs=$enable_static
++
++# What type of objects to build.
++pic_mode=$pic_mode
++
++# Whether or not to optimize for fast installation.
++fast_install=$enable_fast_install
++
++# The host system.
++host_alias=$host_alias
++host=$host
++host_os=$host_os
++
++# The build system.
++build_alias=$build_alias
++build=$build
++build_os=$build_os
++
++# A sed program that does not truncate output.
++SED=$lt_SED
++
++# Sed that helps us avoid accidentally triggering echo(1) options like -n.
++Xsed="\$SED -e 1s/^X//"
++
++# A grep program that handles long lines.
++GREP=$lt_GREP
++
++# An ERE matcher.
++EGREP=$lt_EGREP
++
++# A literal string matcher.
++FGREP=$lt_FGREP
++
++# A BSD- or MS-compatible name lister.
++NM=$lt_NM
++
++# Whether we need soft or hard links.
++LN_S=$lt_LN_S
++
++# What is the maximum length of a command?
++max_cmd_len=$max_cmd_len
++
++# Object file suffix (normally "o").
++objext=$ac_objext
++
++# Executable file suffix (normally "").
++exeext=$exeext
++
++# whether the shell understands "unset".
++lt_unset=$lt_unset
++
++# turn spaces into newlines.
++SP2NL=$lt_lt_SP2NL
++
++# turn newlines into spaces.
++NL2SP=$lt_lt_NL2SP
++
++# How to create reloadable object files.
++reload_flag=$lt_reload_flag
++reload_cmds=$lt_reload_cmds
++
++# An object symbol dumper.
++OBJDUMP=$lt_OBJDUMP
++
++# Method to check whether dependent libraries are shared objects.
++deplibs_check_method=$lt_deplibs_check_method
++
++# Command to use when deplibs_check_method == "file_magic".
++file_magic_cmd=$lt_file_magic_cmd
++
++# The archiver.
++AR=$lt_AR
++AR_FLAGS=$lt_AR_FLAGS
++
++# A symbol stripping program.
++STRIP=$lt_STRIP
++
++# Commands used to install an old-style archive.
++RANLIB=$lt_RANLIB
++old_postinstall_cmds=$lt_old_postinstall_cmds
++old_postuninstall_cmds=$lt_old_postuninstall_cmds
++
++# A C compiler.
++LTCC=$lt_CC
++
++# LTCC compiler flags.
++LTCFLAGS=$lt_CFLAGS
++
++# Take the output of nm and produce a listing of raw symbols and C names.
++global_symbol_pipe=$lt_lt_cv_sys_global_symbol_pipe
++
++# Transform the output of nm in a proper C declaration.
++global_symbol_to_cdecl=$lt_lt_cv_sys_global_symbol_to_cdecl
++
++# Transform the output of nm in a C name address pair.
++global_symbol_to_c_name_address=$lt_lt_cv_sys_global_symbol_to_c_name_address
++
++# Transform the output of nm in a C name address pair when lib prefix is needed.
++global_symbol_to_c_name_address_lib_prefix=$lt_lt_cv_sys_global_symbol_to_c_name_address_lib_prefix
++
++# The name of the directory that contains temporary libtool files.
++objdir=$objdir
++
++# Shell to use when invoking shell scripts.
++SHELL=$lt_SHELL
++
++# An echo program that does not interpret backslashes.
++ECHO=$lt_ECHO
++
++# Used to examine libraries when file_magic_cmd begins with "file".
++MAGIC_CMD=$MAGIC_CMD
++
++# Must we lock files when doing compilation?
++need_locks=$lt_need_locks
++
++# Tool to manipulate archived DWARF debug symbol files on Mac OS X.
++DSYMUTIL=$lt_DSYMUTIL
++
++# Tool to change global to local symbols on Mac OS X.
++NMEDIT=$lt_NMEDIT
++
++# Tool to manipulate fat objects and archives on Mac OS X.
++LIPO=$lt_LIPO
++
++# ldd/readelf like tool for Mach-O binaries on Mac OS X.
++OTOOL=$lt_OTOOL
++
++# ldd/readelf like tool for 64 bit Mach-O binaries on Mac OS X 10.4.
++OTOOL64=$lt_OTOOL64
++
++# Old archive suffix (normally "a").
++libext=$libext
++
++# Shared library suffix (normally ".so").
++shrext_cmds=$lt_shrext_cmds
++
++# The commands to extract the exported symbol list from a shared archive.
++extract_expsyms_cmds=$lt_extract_expsyms_cmds
++
++# Variables whose values should be saved in libtool wrapper scripts and
++# restored at link time.
++variables_saved_for_relink=$lt_variables_saved_for_relink
++
++# Do we need the "lib" prefix for modules?
++need_lib_prefix=$need_lib_prefix
++
++# Do we need a version for libraries?
++need_version=$need_version
++
++# Library versioning type.
++version_type=$version_type
++
++# Shared library runtime path variable.
++runpath_var=$runpath_var
++
++# Shared library path variable.
++shlibpath_var=$shlibpath_var
++
++# Is shlibpath searched before the hard-coded library search path?
++shlibpath_overrides_runpath=$shlibpath_overrides_runpath
++
++# Format of library name prefix.
++libname_spec=$lt_libname_spec
++
++# List of archive names. First name is the real one, the rest are links.
++# The last name is the one that the linker finds with -lNAME
++library_names_spec=$lt_library_names_spec
++
++# The coded name of the library, if different from the real name.
++soname_spec=$lt_soname_spec
++
++# Command to use after installation of a shared archive.
++postinstall_cmds=$lt_postinstall_cmds
++
++# Command to use after uninstallation of a shared archive.
++postuninstall_cmds=$lt_postuninstall_cmds
++
++# Commands used to finish a libtool library installation in a directory.
++finish_cmds=$lt_finish_cmds
++
++# As "finish_cmds", except a single script fragment to be evaled but
++# not shown.
++finish_eval=$lt_finish_eval
++
++# Whether we should hardcode library paths into libraries.
++hardcode_into_libs=$hardcode_into_libs
++
++# Compile-time system search path for libraries.
++sys_lib_search_path_spec=$lt_sys_lib_search_path_spec
++
++# Run-time system search path for libraries.
++sys_lib_dlsearch_path_spec=$lt_sys_lib_dlsearch_path_spec
++
++# Whether dlopen is supported.
++dlopen_support=$enable_dlopen
++
++# Whether dlopen of programs is supported.
++dlopen_self=$enable_dlopen_self
++
++# Whether dlopen of statically linked programs is supported.
++dlopen_self_static=$enable_dlopen_self_static
++
++# Commands to strip libraries.
++old_striplib=$lt_old_striplib
++striplib=$lt_striplib
++
++
++# The linker used to build libraries.
++LD=$lt_LD
++
++# Commands used to build an old-style archive.
++old_archive_cmds=$lt_old_archive_cmds
++
++# A language specific compiler.
++CC=$lt_compiler
++
++# Is the compiler the GNU compiler?
++with_gcc=$GCC
++
++# Compiler flag to turn off builtin functions.
++no_builtin_flag=$lt_lt_prog_compiler_no_builtin_flag
++
++# How to pass a linker flag through the compiler.
++wl=$lt_lt_prog_compiler_wl
++
++# Additional compiler flags for building library objects.
++pic_flag=$lt_lt_prog_compiler_pic
++
++# Compiler flag to prevent dynamic linking.
++link_static_flag=$lt_lt_prog_compiler_static
++
++# Does compiler simultaneously support -c and -o options?
++compiler_c_o=$lt_lt_cv_prog_compiler_c_o
++
++# Whether or not to add -lc for building shared libraries.
++build_libtool_need_lc=$archive_cmds_need_lc
++
++# Whether or not to disallow shared libs when runtime libs are static.
++allow_libtool_libs_with_static_runtimes=$enable_shared_with_static_runtimes
++
++# Compiler flag to allow reflexive dlopens.
++export_dynamic_flag_spec=$lt_export_dynamic_flag_spec
++
++# Compiler flag to generate shared objects directly from archives.
++whole_archive_flag_spec=$lt_whole_archive_flag_spec
++
++# Whether the compiler copes with passing no objects directly.
++compiler_needs_object=$lt_compiler_needs_object
++
++# Create an old-style archive from a shared archive.
++old_archive_from_new_cmds=$lt_old_archive_from_new_cmds
++
++# Create a temporary old-style archive to link instead of a shared archive.
++old_archive_from_expsyms_cmds=$lt_old_archive_from_expsyms_cmds
++
++# Commands used to build a shared archive.
++archive_cmds=$lt_archive_cmds
++archive_expsym_cmds=$lt_archive_expsym_cmds
++
++# Commands used to build a loadable module if different from building
++# a shared archive.
++module_cmds=$lt_module_cmds
++module_expsym_cmds=$lt_module_expsym_cmds
++
++# Whether we are building with GNU ld or not.
++with_gnu_ld=$lt_with_gnu_ld
++
++# Flag that allows shared libraries with undefined symbols to be built.
++allow_undefined_flag=$lt_allow_undefined_flag
++
++# Flag that enforces no undefined symbols.
++no_undefined_flag=$lt_no_undefined_flag
++
++# Flag to hardcode \$libdir into a binary during linking.
++# This must work even if \$libdir does not exist
++hardcode_libdir_flag_spec=$lt_hardcode_libdir_flag_spec
++
++# If ld is used when linking, flag to hardcode \$libdir into a binary
++# during linking. This must work even if \$libdir does not exist.
++hardcode_libdir_flag_spec_ld=$lt_hardcode_libdir_flag_spec_ld
++
++# Whether we need a single "-rpath" flag with a separated argument.
++hardcode_libdir_separator=$lt_hardcode_libdir_separator
++
++# Set to "yes" if using DIR/libNAME\${shared_ext} during linking hardcodes
++# DIR into the resulting binary.
++hardcode_direct=$hardcode_direct
++
++# Set to "yes" if using DIR/libNAME\${shared_ext} during linking hardcodes
++# DIR into the resulting binary and the resulting library dependency is
++# "absolute",i.e impossible to change by setting \${shlibpath_var} if the
++# library is relocated.
++hardcode_direct_absolute=$hardcode_direct_absolute
++
++# Set to "yes" if using the -LDIR flag during linking hardcodes DIR
++# into the resulting binary.
++hardcode_minus_L=$hardcode_minus_L
++
++# Set to "yes" if using SHLIBPATH_VAR=DIR during linking hardcodes DIR
++# into the resulting binary.
++hardcode_shlibpath_var=$hardcode_shlibpath_var
++
++# Set to "yes" if building a shared library automatically hardcodes DIR
++# into the library and all subsequent libraries and executables linked
++# against it.
++hardcode_automatic=$hardcode_automatic
++
++# Set to yes if linker adds runtime paths of dependent libraries
++# to runtime path list.
++inherit_rpath=$inherit_rpath
++
++# Whether libtool must link a program against all its dependency libraries.
++link_all_deplibs=$link_all_deplibs
++
++# Fix the shell variable \$srcfile for the compiler.
++fix_srcfile_path=$lt_fix_srcfile_path
++
++# Set to "yes" if exported symbols are required.
++always_export_symbols=$always_export_symbols
++
++# The commands to list exported symbols.
++export_symbols_cmds=$lt_export_symbols_cmds
++
++# Symbols that should not be listed in the preloaded symbols.
++exclude_expsyms=$lt_exclude_expsyms
++
++# Symbols that must always be exported.
++include_expsyms=$lt_include_expsyms
++
++# Commands necessary for linking programs (against libraries) with templates.
++prelink_cmds=$lt_prelink_cmds
++
++# Specify filename containing input files.
++file_list_spec=$lt_file_list_spec
++
++# How to hardcode a shared library path into an executable.
++hardcode_action=$hardcode_action
++
++# ### END LIBTOOL CONFIG
++
++_LT_EOF
++
++ case $host_os in
++ aix3*)
++ cat <<\_LT_EOF >> "$cfgfile"
++# AIX sometimes has problems with the GCC collect2 program. For some
++# reason, if we set the COLLECT_NAMES environment variable, the problems
++# vanish in a puff of smoke.
++if test "X${COLLECT_NAMES+set}" != Xset; then
++ COLLECT_NAMES=
++ export COLLECT_NAMES
++fi
++_LT_EOF
++ ;;
++ esac
++
++
++ltmain="$ac_aux_dir/ltmain.sh"
++
++
++ # We use sed instead of cat because bash on DJGPP gets confused if
++ # if finds mixed CR/LF and LF-only lines. Since sed operates in
++ # text mode, it properly converts lines to CR/LF. This bash problem
++ # is reportedly fixed, but why not run on old versions too?
++ sed '/^# Generated shell functions inserted here/q' "$ltmain" >> "$cfgfile" \
++ || (rm -f "$cfgfile"; exit 1)
++
++ case $xsi_shell in
++ yes)
++ cat << \_LT_EOF >> "$cfgfile"
++
++# func_dirname file append nondir_replacement
++# Compute the dirname of FILE. If nonempty, add APPEND to the result,
++# otherwise set result to NONDIR_REPLACEMENT.
++func_dirname ()
++{
++ case ${1} in
++ */*) func_dirname_result="${1%/*}${2}" ;;
++ * ) func_dirname_result="${3}" ;;
++ esac
++}
++
++# func_basename file
++func_basename ()
++{
++ func_basename_result="${1##*/}"
++}
++
++# func_dirname_and_basename file append nondir_replacement
++# perform func_basename and func_dirname in a single function
++# call:
++# dirname: Compute the dirname of FILE. If nonempty,
++# add APPEND to the result, otherwise set result
++# to NONDIR_REPLACEMENT.
++# value returned in "$func_dirname_result"
++# basename: Compute filename of FILE.
++# value retuned in "$func_basename_result"
++# Implementation must be kept synchronized with func_dirname
++# and func_basename. For efficiency, we do not delegate to
++# those functions but instead duplicate the functionality here.
++func_dirname_and_basename ()
++{
++ case ${1} in
++ */*) func_dirname_result="${1%/*}${2}" ;;
++ * ) func_dirname_result="${3}" ;;
++ esac
++ func_basename_result="${1##*/}"
++}
++
++# func_stripname prefix suffix name
++# strip PREFIX and SUFFIX off of NAME.
++# PREFIX and SUFFIX must not contain globbing or regex special
++# characters, hashes, percent signs, but SUFFIX may contain a leading
++# dot (in which case that matches only a dot).
++func_stripname ()
++{
++ # pdksh 5.2.14 does not do ${X%$Y} correctly if both X and Y are
++ # positional parameters, so assign one to ordinary parameter first.
++ func_stripname_result=${3}
++ func_stripname_result=${func_stripname_result#"${1}"}
++ func_stripname_result=${func_stripname_result%"${2}"}
++}
++
++# func_opt_split
++func_opt_split ()
++{
++ func_opt_split_opt=${1%%=*}
++ func_opt_split_arg=${1#*=}
++}
++
++# func_lo2o object
++func_lo2o ()
++{
++ case ${1} in
++ *.lo) func_lo2o_result=${1%.lo}.${objext} ;;
++ *) func_lo2o_result=${1} ;;
++ esac
++}
++
++# func_xform libobj-or-source
++func_xform ()
++{
++ func_xform_result=${1%.*}.lo
++}
++
++# func_arith arithmetic-term...
++func_arith ()
++{
++ func_arith_result=$(( $* ))
++}
++
++# func_len string
++# STRING may not start with a hyphen.
++func_len ()
++{
++ func_len_result=${#1}
++}
++
++_LT_EOF
++ ;;
++ *) # Bourne compatible functions.
++ cat << \_LT_EOF >> "$cfgfile"
++
++# func_dirname file append nondir_replacement
++# Compute the dirname of FILE. If nonempty, add APPEND to the result,
++# otherwise set result to NONDIR_REPLACEMENT.
++func_dirname ()
++{
++ # Extract subdirectory from the argument.
++ func_dirname_result=`$ECHO "X${1}" | $Xsed -e "$dirname"`
++ if test "X$func_dirname_result" = "X${1}"; then
++ func_dirname_result="${3}"
++ else
++ func_dirname_result="$func_dirname_result${2}"
++ fi
++}
++
++# func_basename file
++func_basename ()
++{
++ func_basename_result=`$ECHO "X${1}" | $Xsed -e "$basename"`
++}
++
++
++# func_stripname prefix suffix name
++# strip PREFIX and SUFFIX off of NAME.
++# PREFIX and SUFFIX must not contain globbing or regex special
++# characters, hashes, percent signs, but SUFFIX may contain a leading
++# dot (in which case that matches only a dot).
++# func_strip_suffix prefix name
++func_stripname ()
++{
++ case ${2} in
++ .*) func_stripname_result=`$ECHO "X${3}" \
++ | $Xsed -e "s%^${1}%%" -e "s%\\\\${2}\$%%"`;;
++ *) func_stripname_result=`$ECHO "X${3}" \
++ | $Xsed -e "s%^${1}%%" -e "s%${2}\$%%"`;;
++ esac
++}
++
++# sed scripts:
++my_sed_long_opt='1s/^\(-[^=]*\)=.*/\1/;q'
++my_sed_long_arg='1s/^-[^=]*=//'
++
++# func_opt_split
++func_opt_split ()
++{
++ func_opt_split_opt=`$ECHO "X${1}" | $Xsed -e "$my_sed_long_opt"`
++ func_opt_split_arg=`$ECHO "X${1}" | $Xsed -e "$my_sed_long_arg"`
++}
++
++# func_lo2o object
++func_lo2o ()
++{
++ func_lo2o_result=`$ECHO "X${1}" | $Xsed -e "$lo2o"`
++}
++
++# func_xform libobj-or-source
++func_xform ()
++{
++ func_xform_result=`$ECHO "X${1}" | $Xsed -e 's/\.[^.]*$/.lo/'`
++}
++
++# func_arith arithmetic-term...
++func_arith ()
++{
++ func_arith_result=`expr "$@"`
++}
++
++# func_len string
++# STRING may not start with a hyphen.
++func_len ()
++{
++ func_len_result=`expr "$1" : ".*" 2>/dev/null || echo $max_cmd_len`
++}
++
++_LT_EOF
++esac
++
++case $lt_shell_append in
++ yes)
++ cat << \_LT_EOF >> "$cfgfile"
++
++# func_append var value
++# Append VALUE to the end of shell variable VAR.
++func_append ()
++{
++ eval "$1+=\$2"
++}
++_LT_EOF
++ ;;
++ *)
++ cat << \_LT_EOF >> "$cfgfile"
++
++# func_append var value
++# Append VALUE to the end of shell variable VAR.
++func_append ()
++{
++ eval "$1=\$$1\$2"
++}
++
++_LT_EOF
++ ;;
++ esac
++
++
++ sed -n '/^# Generated shell functions inserted here/,$p' "$ltmain" >> "$cfgfile" \
++ || (rm -f "$cfgfile"; exit 1)
++
++ mv -f "$cfgfile" "$ofile" ||
++ (rm -f "$ofile" && cp "$cfgfile" "$ofile" && rm -f "$cfgfile")
++ chmod +x "$ofile"
++
++ ;;
++
++ esac
++done # for ac_tag
++
++
++as_fn_exit 0
++_ACEOF
++ac_clean_files=$ac_clean_files_save
++
++test $ac_write_fail = 0 ||
++ as_fn_error "write failure creating $CONFIG_STATUS" "$LINENO" 5
++
++
++# configure is writing to config.log, and then calls config.status.
++# config.status does its own redirection, appending to config.log.
++# Unfortunately, on DOS this fails, as config.log is still kept open
++# by configure, so config.status won't be able to write to it; its
++# output is simply discarded. So we exec the FD to /dev/null,
++# effectively closing config.log, so it can be properly (re)opened and
++# appended to by config.status. When coming back to configure, we
++# need to make the FD available again.
++if test "$no_create" != yes; then
++ ac_cs_success=:
++ ac_config_status_args=
++ test "$silent" = yes &&
++ ac_config_status_args="$ac_config_status_args --quiet"
++ exec 5>/dev/null
++ $SHELL $CONFIG_STATUS $ac_config_status_args || ac_cs_success=false
++ exec 5>>config.log
++ # Use ||, not &&, to avoid exiting from the if with $? = 1, which
++ # would make configure fail if this is the last instruction.
++ $ac_cs_success || as_fn_exit $?
++fi
++if test -n "$ac_unrecognized_opts" && test "$enable_option_checking" != no; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: WARNING: unrecognized options: $ac_unrecognized_opts" >&5
++$as_echo "$as_me: WARNING: unrecognized options: $ac_unrecognized_opts" >&2;}
++fi
++
+diff -urP EMBOSS-6.3.1.orig/autom4te.cache/requests EMBOSS-6.3.1/autom4te.cache/requests
+--- EMBOSS-6.3.1.orig/autom4te.cache/requests 1969-12-31 19:00:00.000000000 -0500
++++ EMBOSS-6.3.1/autom4te.cache/requests 2010-08-02 17:23:22.949268306 -0400
+@@ -0,0 +1,68 @@
++# This file was generated.
++# It contains the lists of macros which have been traced.
++# It can be safely removed.
++
++ at request = (
++ bless( [
++ '0',
++ 1,
++ [
++ '/usr/share/autoconf'
++ ],
++ [
++ '/usr/share/autoconf/autoconf/autoconf.m4f',
++ 'aclocal.m4',
++ 'configure.in'
++ ],
++ {
++ 'AM_PROG_F77_C_O' => 1,
++ '_LT_AC_TAGCONFIG' => 1,
++ 'm4_pattern_forbid' => 1,
++ 'AC_INIT' => 1,
++ '_AM_COND_IF' => 1,
++ 'AC_CANONICAL_TARGET' => 1,
++ 'AC_SUBST' => 1,
++ 'AC_CONFIG_LIBOBJ_DIR' => 1,
++ 'AC_FC_SRCEXT' => 1,
++ 'AC_CANONICAL_HOST' => 1,
++ 'AC_PROG_LIBTOOL' => 1,
++ 'AM_INIT_AUTOMAKE' => 1,
++ 'AC_CONFIG_SUBDIRS' => 1,
++ 'AM_AUTOMAKE_VERSION' => 1,
++ 'LT_CONFIG_LTDL_DIR' => 1,
++ 'AC_REQUIRE_AUX_FILE' => 1,
++ 'AC_CONFIG_LINKS' => 1,
++ 'LT_SUPPORTED_TAG' => 1,
++ 'm4_sinclude' => 1,
++ 'AM_MAINTAINER_MODE' => 1,
++ 'AM_GNU_GETTEXT_INTL_SUBDIR' => 1,
++ '_m4_warn' => 1,
++ 'AM_PROG_CXX_C_O' => 1,
++ '_AM_COND_ENDIF' => 1,
++ 'AM_ENABLE_MULTILIB' => 1,
++ 'AM_SILENT_RULES' => 1,
++ 'AC_CONFIG_FILES' => 1,
++ 'LT_INIT' => 1,
++ 'include' => 1,
++ 'AM_GNU_GETTEXT' => 1,
++ 'AC_LIBSOURCE' => 1,
++ 'AM_PROG_FC_C_O' => 1,
++ 'AC_CANONICAL_BUILD' => 1,
++ 'AC_FC_FREEFORM' => 1,
++ 'AH_OUTPUT' => 1,
++ '_AM_SUBST_NOTMAKE' => 1,
++ 'AC_CONFIG_AUX_DIR' => 1,
++ 'm4_pattern_allow' => 1,
++ 'sinclude' => 1,
++ 'AM_PROG_CC_C_O' => 1,
++ 'AC_CANONICAL_SYSTEM' => 1,
++ 'AM_CONDITIONAL' => 1,
++ 'AC_CONFIG_HEADERS' => 1,
++ 'AC_DEFINE_TRACE_LITERAL' => 1,
++ 'm4_include' => 1,
++ '_AM_COND_ELSE' => 1,
++ 'AC_SUBST_TRACE' => 1
++ }
++ ], 'Autom4te::Request' )
++ );
++
+diff -urP EMBOSS-6.3.1.orig/autom4te.cache/traces.0 EMBOSS-6.3.1/autom4te.cache/traces.0
+--- EMBOSS-6.3.1.orig/autom4te.cache/traces.0 1969-12-31 19:00:00.000000000 -0500
++++ EMBOSS-6.3.1/autom4te.cache/traces.0 2010-08-02 17:23:22.873143149 -0400
+@@ -0,0 +1,1017 @@
++m4trace:aclocal.m4:8901: -1- m4_include([m4/amd64.m4])
++m4trace:aclocal.m4:8902: -1- m4_include([m4/general.m4])
++m4trace:aclocal.m4:8903: -1- m4_include([m4/hpdf.m4])
++m4trace:aclocal.m4:8904: -1- m4_include([m4/java.m4])
++m4trace:aclocal.m4:8905: -1- m4_include([m4/lf_x11.m4])
++m4trace:aclocal.m4:8906: -1- m4_include([m4/mysql.m4])
++m4trace:aclocal.m4:8907: -1- m4_include([m4/plplot.m4])
++m4trace:aclocal.m4:8908: -1- m4_include([m4/pngdriver.m4])
++m4trace:aclocal.m4:8909: -1- m4_include([m4/postgresql.m4])
++m4trace:aclocal.m4:8910: -1- m4_include([m4/sgi.m4])
++m4trace:configure.in:8: -1- AC_INIT([ajax/core/ajmath.c])
++m4trace:configure.in:8: -1- m4_pattern_forbid([^_?A[CHUM]_])
++m4trace:configure.in:8: -1- m4_pattern_forbid([_AC_])
++m4trace:configure.in:8: -1- m4_pattern_forbid([^LIBOBJS$], [do not use LIBOBJS directly, use AC_LIBOBJ (see section `AC_LIBOBJ vs LIBOBJS'])
++m4trace:configure.in:8: -1- m4_pattern_allow([^AS_FLAGS$])
++m4trace:configure.in:8: -1- m4_pattern_forbid([^_?m4_])
++m4trace:configure.in:8: -1- m4_pattern_forbid([^dnl$])
++m4trace:configure.in:8: -1- m4_pattern_forbid([^_?AS_])
++m4trace:configure.in:8: -1- AC_SUBST([SHELL])
++m4trace:configure.in:8: -1- AC_SUBST_TRACE([SHELL])
++m4trace:configure.in:8: -1- m4_pattern_allow([^SHELL$])
++m4trace:configure.in:8: -1- AC_SUBST([PATH_SEPARATOR])
++m4trace:configure.in:8: -1- AC_SUBST_TRACE([PATH_SEPARATOR])
++m4trace:configure.in:8: -1- m4_pattern_allow([^PATH_SEPARATOR$])
++m4trace:configure.in:8: -1- AC_SUBST([PACKAGE_NAME], [m4_ifdef([AC_PACKAGE_NAME], ['AC_PACKAGE_NAME'])])
++m4trace:configure.in:8: -1- AC_SUBST_TRACE([PACKAGE_NAME])
++m4trace:configure.in:8: -1- m4_pattern_allow([^PACKAGE_NAME$])
++m4trace:configure.in:8: -1- AC_SUBST([PACKAGE_TARNAME], [m4_ifdef([AC_PACKAGE_TARNAME], ['AC_PACKAGE_TARNAME'])])
++m4trace:configure.in:8: -1- AC_SUBST_TRACE([PACKAGE_TARNAME])
++m4trace:configure.in:8: -1- m4_pattern_allow([^PACKAGE_TARNAME$])
++m4trace:configure.in:8: -1- AC_SUBST([PACKAGE_VERSION], [m4_ifdef([AC_PACKAGE_VERSION], ['AC_PACKAGE_VERSION'])])
++m4trace:configure.in:8: -1- AC_SUBST_TRACE([PACKAGE_VERSION])
++m4trace:configure.in:8: -1- m4_pattern_allow([^PACKAGE_VERSION$])
++m4trace:configure.in:8: -1- AC_SUBST([PACKAGE_STRING], [m4_ifdef([AC_PACKAGE_STRING], ['AC_PACKAGE_STRING'])])
++m4trace:configure.in:8: -1- AC_SUBST_TRACE([PACKAGE_STRING])
++m4trace:configure.in:8: -1- m4_pattern_allow([^PACKAGE_STRING$])
++m4trace:configure.in:8: -1- AC_SUBST([PACKAGE_BUGREPORT], [m4_ifdef([AC_PACKAGE_BUGREPORT], ['AC_PACKAGE_BUGREPORT'])])
++m4trace:configure.in:8: -1- AC_SUBST_TRACE([PACKAGE_BUGREPORT])
++m4trace:configure.in:8: -1- m4_pattern_allow([^PACKAGE_BUGREPORT$])
++m4trace:configure.in:8: -1- AC_SUBST([PACKAGE_URL], [m4_ifdef([AC_PACKAGE_URL], ['AC_PACKAGE_URL'])])
++m4trace:configure.in:8: -1- AC_SUBST_TRACE([PACKAGE_URL])
++m4trace:configure.in:8: -1- m4_pattern_allow([^PACKAGE_URL$])
++m4trace:configure.in:8: -1- AC_SUBST([exec_prefix], [NONE])
++m4trace:configure.in:8: -1- AC_SUBST_TRACE([exec_prefix])
++m4trace:configure.in:8: -1- m4_pattern_allow([^exec_prefix$])
++m4trace:configure.in:8: -1- AC_SUBST([prefix], [NONE])
++m4trace:configure.in:8: -1- AC_SUBST_TRACE([prefix])
++m4trace:configure.in:8: -1- m4_pattern_allow([^prefix$])
++m4trace:configure.in:8: -1- AC_SUBST([program_transform_name], [s,x,x,])
++m4trace:configure.in:8: -1- AC_SUBST_TRACE([program_transform_name])
++m4trace:configure.in:8: -1- m4_pattern_allow([^program_transform_name$])
++m4trace:configure.in:8: -1- AC_SUBST([bindir], ['${exec_prefix}/bin'])
++m4trace:configure.in:8: -1- AC_SUBST_TRACE([bindir])
++m4trace:configure.in:8: -1- m4_pattern_allow([^bindir$])
++m4trace:configure.in:8: -1- AC_SUBST([sbindir], ['${exec_prefix}/sbin'])
++m4trace:configure.in:8: -1- AC_SUBST_TRACE([sbindir])
++m4trace:configure.in:8: -1- m4_pattern_allow([^sbindir$])
++m4trace:configure.in:8: -1- AC_SUBST([libexecdir], ['${exec_prefix}/libexec'])
++m4trace:configure.in:8: -1- AC_SUBST_TRACE([libexecdir])
++m4trace:configure.in:8: -1- m4_pattern_allow([^libexecdir$])
++m4trace:configure.in:8: -1- AC_SUBST([datarootdir], ['${prefix}/share'])
++m4trace:configure.in:8: -1- AC_SUBST_TRACE([datarootdir])
++m4trace:configure.in:8: -1- m4_pattern_allow([^datarootdir$])
++m4trace:configure.in:8: -1- AC_SUBST([datadir], ['${datarootdir}'])
++m4trace:configure.in:8: -1- AC_SUBST_TRACE([datadir])
++m4trace:configure.in:8: -1- m4_pattern_allow([^datadir$])
++m4trace:configure.in:8: -1- AC_SUBST([sysconfdir], ['${prefix}/etc'])
++m4trace:configure.in:8: -1- AC_SUBST_TRACE([sysconfdir])
++m4trace:configure.in:8: -1- m4_pattern_allow([^sysconfdir$])
++m4trace:configure.in:8: -1- AC_SUBST([sharedstatedir], ['${prefix}/com'])
++m4trace:configure.in:8: -1- AC_SUBST_TRACE([sharedstatedir])
++m4trace:configure.in:8: -1- m4_pattern_allow([^sharedstatedir$])
++m4trace:configure.in:8: -1- AC_SUBST([localstatedir], ['${prefix}/var'])
++m4trace:configure.in:8: -1- AC_SUBST_TRACE([localstatedir])
++m4trace:configure.in:8: -1- m4_pattern_allow([^localstatedir$])
++m4trace:configure.in:8: -1- AC_SUBST([includedir], ['${prefix}/include'])
++m4trace:configure.in:8: -1- AC_SUBST_TRACE([includedir])
++m4trace:configure.in:8: -1- m4_pattern_allow([^includedir$])
++m4trace:configure.in:8: -1- AC_SUBST([oldincludedir], ['/usr/include'])
++m4trace:configure.in:8: -1- AC_SUBST_TRACE([oldincludedir])
++m4trace:configure.in:8: -1- m4_pattern_allow([^oldincludedir$])
++m4trace:configure.in:8: -1- AC_SUBST([docdir], [m4_ifset([AC_PACKAGE_TARNAME],
++ ['${datarootdir}/doc/${PACKAGE_TARNAME}'],
++ ['${datarootdir}/doc/${PACKAGE}'])])
++m4trace:configure.in:8: -1- AC_SUBST_TRACE([docdir])
++m4trace:configure.in:8: -1- m4_pattern_allow([^docdir$])
++m4trace:configure.in:8: -1- AC_SUBST([infodir], ['${datarootdir}/info'])
++m4trace:configure.in:8: -1- AC_SUBST_TRACE([infodir])
++m4trace:configure.in:8: -1- m4_pattern_allow([^infodir$])
++m4trace:configure.in:8: -1- AC_SUBST([htmldir], ['${docdir}'])
++m4trace:configure.in:8: -1- AC_SUBST_TRACE([htmldir])
++m4trace:configure.in:8: -1- m4_pattern_allow([^htmldir$])
++m4trace:configure.in:8: -1- AC_SUBST([dvidir], ['${docdir}'])
++m4trace:configure.in:8: -1- AC_SUBST_TRACE([dvidir])
++m4trace:configure.in:8: -1- m4_pattern_allow([^dvidir$])
++m4trace:configure.in:8: -1- AC_SUBST([pdfdir], ['${docdir}'])
++m4trace:configure.in:8: -1- AC_SUBST_TRACE([pdfdir])
++m4trace:configure.in:8: -1- m4_pattern_allow([^pdfdir$])
++m4trace:configure.in:8: -1- AC_SUBST([psdir], ['${docdir}'])
++m4trace:configure.in:8: -1- AC_SUBST_TRACE([psdir])
++m4trace:configure.in:8: -1- m4_pattern_allow([^psdir$])
++m4trace:configure.in:8: -1- AC_SUBST([libdir], ['${exec_prefix}/lib'])
++m4trace:configure.in:8: -1- AC_SUBST_TRACE([libdir])
++m4trace:configure.in:8: -1- m4_pattern_allow([^libdir$])
++m4trace:configure.in:8: -1- AC_SUBST([localedir], ['${datarootdir}/locale'])
++m4trace:configure.in:8: -1- AC_SUBST_TRACE([localedir])
++m4trace:configure.in:8: -1- m4_pattern_allow([^localedir$])
++m4trace:configure.in:8: -1- AC_SUBST([mandir], ['${datarootdir}/man'])
++m4trace:configure.in:8: -1- AC_SUBST_TRACE([mandir])
++m4trace:configure.in:8: -1- m4_pattern_allow([^mandir$])
++m4trace:configure.in:8: -1- AC_DEFINE_TRACE_LITERAL([PACKAGE_NAME])
++m4trace:configure.in:8: -1- m4_pattern_allow([^PACKAGE_NAME$])
++m4trace:configure.in:8: -1- AH_OUTPUT([PACKAGE_NAME], [/* Define to the full name of this package. */
++@%:@undef PACKAGE_NAME])
++m4trace:configure.in:8: -1- AC_DEFINE_TRACE_LITERAL([PACKAGE_TARNAME])
++m4trace:configure.in:8: -1- m4_pattern_allow([^PACKAGE_TARNAME$])
++m4trace:configure.in:8: -1- AH_OUTPUT([PACKAGE_TARNAME], [/* Define to the one symbol short name of this package. */
++@%:@undef PACKAGE_TARNAME])
++m4trace:configure.in:8: -1- AC_DEFINE_TRACE_LITERAL([PACKAGE_VERSION])
++m4trace:configure.in:8: -1- m4_pattern_allow([^PACKAGE_VERSION$])
++m4trace:configure.in:8: -1- AH_OUTPUT([PACKAGE_VERSION], [/* Define to the version of this package. */
++@%:@undef PACKAGE_VERSION])
++m4trace:configure.in:8: -1- AC_DEFINE_TRACE_LITERAL([PACKAGE_STRING])
++m4trace:configure.in:8: -1- m4_pattern_allow([^PACKAGE_STRING$])
++m4trace:configure.in:8: -1- AH_OUTPUT([PACKAGE_STRING], [/* Define to the full name and version of this package. */
++@%:@undef PACKAGE_STRING])
++m4trace:configure.in:8: -1- AC_DEFINE_TRACE_LITERAL([PACKAGE_BUGREPORT])
++m4trace:configure.in:8: -1- m4_pattern_allow([^PACKAGE_BUGREPORT$])
++m4trace:configure.in:8: -1- AH_OUTPUT([PACKAGE_BUGREPORT], [/* Define to the address where bug reports for this package should be sent. */
++@%:@undef PACKAGE_BUGREPORT])
++m4trace:configure.in:8: -1- AC_DEFINE_TRACE_LITERAL([PACKAGE_URL])
++m4trace:configure.in:8: -1- m4_pattern_allow([^PACKAGE_URL$])
++m4trace:configure.in:8: -1- AH_OUTPUT([PACKAGE_URL], [/* Define to the home page for this package. */
++@%:@undef PACKAGE_URL])
++m4trace:configure.in:8: -1- AC_SUBST([DEFS])
++m4trace:configure.in:8: -1- AC_SUBST_TRACE([DEFS])
++m4trace:configure.in:8: -1- m4_pattern_allow([^DEFS$])
++m4trace:configure.in:8: -1- AC_SUBST([ECHO_C])
++m4trace:configure.in:8: -1- AC_SUBST_TRACE([ECHO_C])
++m4trace:configure.in:8: -1- m4_pattern_allow([^ECHO_C$])
++m4trace:configure.in:8: -1- AC_SUBST([ECHO_N])
++m4trace:configure.in:8: -1- AC_SUBST_TRACE([ECHO_N])
++m4trace:configure.in:8: -1- m4_pattern_allow([^ECHO_N$])
++m4trace:configure.in:8: -1- AC_SUBST([ECHO_T])
++m4trace:configure.in:8: -1- AC_SUBST_TRACE([ECHO_T])
++m4trace:configure.in:8: -1- m4_pattern_allow([^ECHO_T$])
++m4trace:configure.in:8: -1- AC_SUBST([LIBS])
++m4trace:configure.in:8: -1- AC_SUBST_TRACE([LIBS])
++m4trace:configure.in:8: -1- m4_pattern_allow([^LIBS$])
++m4trace:configure.in:8: -1- AC_SUBST([build_alias])
++m4trace:configure.in:8: -1- AC_SUBST_TRACE([build_alias])
++m4trace:configure.in:8: -1- m4_pattern_allow([^build_alias$])
++m4trace:configure.in:8: -1- AC_SUBST([host_alias])
++m4trace:configure.in:8: -1- AC_SUBST_TRACE([host_alias])
++m4trace:configure.in:8: -1- m4_pattern_allow([^host_alias$])
++m4trace:configure.in:8: -1- AC_SUBST([target_alias])
++m4trace:configure.in:8: -1- AC_SUBST_TRACE([target_alias])
++m4trace:configure.in:8: -1- m4_pattern_allow([^target_alias$])
++m4trace:configure.in:9: -1- AM_INIT_AUTOMAKE([EMBOSS], [6.3.1])
++m4trace:configure.in:9: -1- m4_pattern_allow([^AM_[A-Z]+FLAGS$])
++m4trace:configure.in:9: -1- AM_AUTOMAKE_VERSION([1.11.1])
++m4trace:configure.in:9: -1- AC_REQUIRE_AUX_FILE([install-sh])
++m4trace:configure.in:9: -1- AC_SUBST([INSTALL_PROGRAM])
++m4trace:configure.in:9: -1- AC_SUBST_TRACE([INSTALL_PROGRAM])
++m4trace:configure.in:9: -1- m4_pattern_allow([^INSTALL_PROGRAM$])
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++m4trace:configure.in:20: -1- AC_SUBST_TRACE([CC])
++m4trace:configure.in:20: -1- m4_pattern_allow([^CC$])
++m4trace:configure.in:20: -1- AC_SUBST([CFLAGS])
++m4trace:configure.in:20: -1- AC_SUBST_TRACE([CFLAGS])
++m4trace:configure.in:20: -1- m4_pattern_allow([^CFLAGS$])
++m4trace:configure.in:20: -1- AC_SUBST([LDFLAGS])
++m4trace:configure.in:20: -1- AC_SUBST_TRACE([LDFLAGS])
++m4trace:configure.in:20: -1- m4_pattern_allow([^LDFLAGS$])
++m4trace:configure.in:20: -1- AC_SUBST([LIBS])
++m4trace:configure.in:20: -1- AC_SUBST_TRACE([LIBS])
++m4trace:configure.in:20: -1- m4_pattern_allow([^LIBS$])
++m4trace:configure.in:20: -1- AC_SUBST([CPPFLAGS])
++m4trace:configure.in:20: -1- AC_SUBST_TRACE([CPPFLAGS])
++m4trace:configure.in:20: -1- m4_pattern_allow([^CPPFLAGS$])
++m4trace:configure.in:20: -1- AC_SUBST([CC])
++m4trace:configure.in:20: -1- AC_SUBST_TRACE([CC])
++m4trace:configure.in:20: -1- m4_pattern_allow([^CC$])
++m4trace:configure.in:20: -1- AC_SUBST([CC])
++m4trace:configure.in:20: -1- AC_SUBST_TRACE([CC])
++m4trace:configure.in:20: -1- m4_pattern_allow([^CC$])
++m4trace:configure.in:20: -1- AC_SUBST([CC])
++m4trace:configure.in:20: -1- AC_SUBST_TRACE([CC])
++m4trace:configure.in:20: -1- m4_pattern_allow([^CC$])
++m4trace:configure.in:20: -1- AC_SUBST([CC])
++m4trace:configure.in:20: -1- AC_SUBST_TRACE([CC])
++m4trace:configure.in:20: -1- m4_pattern_allow([^CC$])
++m4trace:configure.in:20: -1- AC_SUBST([ac_ct_CC])
++m4trace:configure.in:20: -1- AC_SUBST_TRACE([ac_ct_CC])
++m4trace:configure.in:20: -1- m4_pattern_allow([^ac_ct_CC$])
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++m4trace:configure.in:20: -1- AC_SUBST_TRACE([CCDEPMODE])
++m4trace:configure.in:20: -1- m4_pattern_allow([^CCDEPMODE$])
++m4trace:configure.in:20: -1- AM_CONDITIONAL([am__fastdepCC], [
++ test "x$enable_dependency_tracking" != xno \
++ && test "$am_cv_CC_dependencies_compiler_type" = gcc3])
++m4trace:configure.in:20: -1- AC_SUBST([am__fastdepCC_TRUE])
++m4trace:configure.in:20: -1- AC_SUBST_TRACE([am__fastdepCC_TRUE])
++m4trace:configure.in:20: -1- m4_pattern_allow([^am__fastdepCC_TRUE$])
++m4trace:configure.in:20: -1- AC_SUBST([am__fastdepCC_FALSE])
++m4trace:configure.in:20: -1- AC_SUBST_TRACE([am__fastdepCC_FALSE])
++m4trace:configure.in:20: -1- m4_pattern_allow([^am__fastdepCC_FALSE$])
++m4trace:configure.in:20: -1- _AM_SUBST_NOTMAKE([am__fastdepCC_TRUE])
++m4trace:configure.in:20: -1- _AM_SUBST_NOTMAKE([am__fastdepCC_FALSE])
++m4trace:configure.in:21: -1- AC_SUBST([CPP])
++m4trace:configure.in:21: -1- AC_SUBST_TRACE([CPP])
++m4trace:configure.in:21: -1- m4_pattern_allow([^CPP$])
++m4trace:configure.in:21: -1- AC_SUBST([CPPFLAGS])
++m4trace:configure.in:21: -1- AC_SUBST_TRACE([CPPFLAGS])
++m4trace:configure.in:21: -1- m4_pattern_allow([^CPPFLAGS$])
++m4trace:configure.in:21: -1- AC_SUBST([CPP])
++m4trace:configure.in:21: -1- AC_SUBST_TRACE([CPP])
++m4trace:configure.in:21: -1- m4_pattern_allow([^CPP$])
++m4trace:configure.in:22: -1- AH_OUTPUT([inline], [/* Define to `__inline__\' or `__inline\' if that\'s what the C compiler
++ calls it, or to nothing if \'inline\' is not supported under any name. */
++#ifndef __cplusplus
++#undef inline
++#endif])
++m4trace:configure.in:197: -1- AH_OUTPUT([WORDS_BIGENDIAN], [/* Define WORDS_BIGENDIAN to 1 if your processor stores words with the most
++ significant byte first (like Motorola and SPARC, unlike Intel). */
++#if defined AC_APPLE_UNIVERSAL_BUILD
++# if defined __BIG_ENDIAN__
++# define WORDS_BIGENDIAN 1
++# endif
++#else
++# ifndef WORDS_BIGENDIAN
++# undef WORDS_BIGENDIAN
++# endif
++#endif])
++m4trace:configure.in:197: -1- AC_DEFINE_TRACE_LITERAL([AC_APPLE_UNIVERSAL_BUILD])
++m4trace:configure.in:197: -1- m4_pattern_allow([^AC_APPLE_UNIVERSAL_BUILD$])
++m4trace:configure.in:197: -1- AH_OUTPUT([AC_APPLE_UNIVERSAL_BUILD], [/* Define if building universal (internal helper macro) */
++@%:@undef AC_APPLE_UNIVERSAL_BUILD])
++m4trace:configure.in:201: -1- AC_SUBST([AJAX_FIXED_ROOT])
++m4trace:configure.in:201: -1- AC_SUBST_TRACE([AJAX_FIXED_ROOT])
++m4trace:configure.in:201: -1- m4_pattern_allow([^AJAX_FIXED_ROOT$])
++m4trace:configure.in:203: -1- AC_SUBST([EMBOSS_TOP])
++m4trace:configure.in:203: -1- AC_SUBST_TRACE([EMBOSS_TOP])
++m4trace:configure.in:203: -1- m4_pattern_allow([^EMBOSS_TOP$])
++m4trace:configure.in:205: -1- AC_SUBST([AJAX_SYSTEM])
++m4trace:configure.in:205: -1- AC_SUBST_TRACE([AJAX_SYSTEM])
++m4trace:configure.in:205: -1- m4_pattern_allow([^AJAX_SYSTEM$])
++m4trace:configure.in:211: -1- AC_SUBST([LN_S], [$as_ln_s])
++m4trace:configure.in:211: -1- AC_SUBST_TRACE([LN_S])
++m4trace:configure.in:211: -1- m4_pattern_allow([^LN_S$])
++m4trace:configure.in:212: -1- AC_SUBST([SET_MAKE])
++m4trace:configure.in:212: -1- AC_SUBST_TRACE([SET_MAKE])
++m4trace:configure.in:212: -1- m4_pattern_allow([^SET_MAKE$])
++m4trace:configure.in:226: -1- AC_SUBST([XMKMF])
++m4trace:configure.in:226: -1- AC_SUBST_TRACE([XMKMF])
++m4trace:configure.in:226: -1- m4_pattern_allow([^XMKMF$])
++m4trace:configure.in:226: -1- AC_DEFINE_TRACE_LITERAL([X_DISPLAY_MISSING])
++m4trace:configure.in:226: -1- m4_pattern_allow([^X_DISPLAY_MISSING$])
++m4trace:configure.in:226: -1- AH_OUTPUT([X_DISPLAY_MISSING], [/* Define to 1 if the X Window System is missing or not being used. */
++@%:@undef X_DISPLAY_MISSING])
++m4trace:configure.in:226: -1- AC_SUBST([X_CFLAGS])
++m4trace:configure.in:226: -1- AC_SUBST_TRACE([X_CFLAGS])
++m4trace:configure.in:226: -1- m4_pattern_allow([^X_CFLAGS$])
++m4trace:configure.in:226: -1- AC_SUBST([X_PRE_LIBS])
++m4trace:configure.in:226: -1- AC_SUBST_TRACE([X_PRE_LIBS])
++m4trace:configure.in:226: -1- m4_pattern_allow([^X_PRE_LIBS$])
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++m4trace:configure.in:226: -1- AC_SUBST_TRACE([X_LIBS])
++m4trace:configure.in:226: -1- m4_pattern_allow([^X_LIBS$])
++m4trace:configure.in:226: -1- AC_SUBST([X_EXTRA_LIBS])
++m4trace:configure.in:226: -1- AC_SUBST_TRACE([X_EXTRA_LIBS])
++m4trace:configure.in:226: -1- m4_pattern_allow([^X_EXTRA_LIBS$])
++m4trace:configure.in:227: -1- AH_OUTPUT([HAVE_DIRENT_H], [/* Define to 1 if you have the <dirent.h> header file, and it defines `DIR\'.
++ */
++@%:@undef HAVE_DIRENT_H])
++m4trace:configure.in:227: -1- AH_OUTPUT([HAVE_SYS_NDIR_H], [/* Define to 1 if you have the <sys/ndir.h> header file, and it defines `DIR\'.
++ */
++@%:@undef HAVE_SYS_NDIR_H])
++m4trace:configure.in:227: -1- AH_OUTPUT([HAVE_SYS_DIR_H], [/* Define to 1 if you have the <sys/dir.h> header file, and it defines `DIR\'.
++ */
++@%:@undef HAVE_SYS_DIR_H])
++m4trace:configure.in:227: -1- AH_OUTPUT([HAVE_NDIR_H], [/* Define to 1 if you have the <ndir.h> header file, and it defines `DIR\'. */
++@%:@undef HAVE_NDIR_H])
++m4trace:configure.in:228: -1- AC_DEFINE_TRACE_LITERAL([STDC_HEADERS])
++m4trace:configure.in:228: -1- m4_pattern_allow([^STDC_HEADERS$])
++m4trace:configure.in:228: -1- AH_OUTPUT([STDC_HEADERS], [/* Define to 1 if you have the ANSI C header files. */
++@%:@undef STDC_HEADERS])
++m4trace:configure.in:230: -1- AH_OUTPUT([HAVE_UNISTD_H], [/* Define to 1 if you have the <unistd.h> header file. */
++@%:@undef HAVE_UNISTD_H])
++m4trace:configure.in:230: -1- AH_OUTPUT([HAVE_TARGETCONFIG_H], [/* Define to 1 if you have the <TargetConfig.h> header file. */
++@%:@undef HAVE_TARGETCONFIG_H])
++m4trace:configure.in:238: -1- AC_DEFINE_TRACE_LITERAL([const])
++m4trace:configure.in:238: -1- m4_pattern_allow([^const$])
++m4trace:configure.in:238: -1- AH_OUTPUT([const], [/* Define to empty if `const\' does not conform to ANSI C. */
++@%:@undef const])
++m4trace:configure.in:243: -1- AC_DEFINE_TRACE_LITERAL([pid_t])
++m4trace:configure.in:243: -1- m4_pattern_allow([^pid_t$])
++m4trace:configure.in:243: -1- AH_OUTPUT([pid_t], [/* Define to `int\' if <sys/types.h> does not define. */
++@%:@undef pid_t])
++m4trace:configure.in:244: -1- AC_DEFINE_TRACE_LITERAL([size_t])
++m4trace:configure.in:244: -1- m4_pattern_allow([^size_t$])
++m4trace:configure.in:244: -1- AH_OUTPUT([size_t], [/* Define to `unsigned int\' if <sys/types.h> does not define. */
++@%:@undef size_t])
++m4trace:configure.in:247: -1- AC_DEFINE_TRACE_LITERAL([TM_IN_SYS_TIME])
++m4trace:configure.in:247: -1- m4_pattern_allow([^TM_IN_SYS_TIME$])
++m4trace:configure.in:247: -1- AH_OUTPUT([TM_IN_SYS_TIME], [/* Define to 1 if your <sys/time.h> declares `struct tm\'. */
++@%:@undef TM_IN_SYS_TIME])
++m4trace:configure.in:255: -1- AC_DEFINE_TRACE_LITERAL([GETPGRP_VOID])
++m4trace:configure.in:255: -1- m4_pattern_allow([^GETPGRP_VOID$])
++m4trace:configure.in:255: -1- AH_OUTPUT([GETPGRP_VOID], [/* Define to 1 if the `getpgrp\' function requires zero arguments. */
++@%:@undef GETPGRP_VOID])
++m4trace:configure.in:256: -1- AH_OUTPUT([HAVE_STRFTIME], [/* Define to 1 if you have the `strftime\' function. */
++@%:@undef HAVE_STRFTIME])
++m4trace:configure.in:256: -1- AC_DEFINE_TRACE_LITERAL([HAVE_STRFTIME])
++m4trace:configure.in:256: -1- m4_pattern_allow([^HAVE_STRFTIME$])
++m4trace:configure.in:256: -1- AC_DEFINE_TRACE_LITERAL([HAVE_STRFTIME])
++m4trace:configure.in:256: -1- m4_pattern_allow([^HAVE_STRFTIME$])
++m4trace:configure.in:257: -1- _m4_warn([obsolete], [The macro `AC_FUNC_VFORK' is obsolete.
++You should run autoupdate.], [../../lib/autoconf/functions.m4:1926: AC_FUNC_VFORK is expanded from...
++configure.in:257: the top level])
++m4trace:configure.in:257: -1- AH_OUTPUT([HAVE_VFORK_H], [/* Define to 1 if you have the <vfork.h> header file. */
++@%:@undef HAVE_VFORK_H])
++m4trace:configure.in:257: -1- AC_DEFINE_TRACE_LITERAL([HAVE_VFORK_H])
++m4trace:configure.in:257: -1- m4_pattern_allow([^HAVE_VFORK_H$])
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++m4trace:configure.in:257: -1- AH_OUTPUT([HAVE_VFORK], [/* Define to 1 if you have the `vfork\' function. */
++@%:@undef HAVE_VFORK])
++m4trace:configure.in:257: -1- AC_DEFINE_TRACE_LITERAL([HAVE_WORKING_VFORK])
++m4trace:configure.in:257: -1- m4_pattern_allow([^HAVE_WORKING_VFORK$])
++m4trace:configure.in:257: -1- AH_OUTPUT([HAVE_WORKING_VFORK], [/* Define to 1 if `vfork\' works. */
++@%:@undef HAVE_WORKING_VFORK])
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++m4trace:configure.in:257: -1- m4_pattern_allow([^vfork$])
++m4trace:configure.in:257: -1- AH_OUTPUT([vfork], [/* Define as `fork\' if `vfork\' does not work. */
++@%:@undef vfork])
++m4trace:configure.in:257: -1- AC_DEFINE_TRACE_LITERAL([HAVE_WORKING_FORK])
++m4trace:configure.in:257: -1- m4_pattern_allow([^HAVE_WORKING_FORK$])
++m4trace:configure.in:257: -1- AH_OUTPUT([HAVE_WORKING_FORK], [/* Define to 1 if `fork\' works. */
++@%:@undef HAVE_WORKING_FORK])
++m4trace:configure.in:258: -1- AH_OUTPUT([HAVE_VPRINTF], [/* Define to 1 if you have the `vprintf\' function. */
++@%:@undef HAVE_VPRINTF])
++m4trace:configure.in:258: -1- AC_DEFINE_TRACE_LITERAL([HAVE_VPRINTF])
++m4trace:configure.in:258: -1- m4_pattern_allow([^HAVE_VPRINTF$])
++m4trace:configure.in:258: -1- AC_DEFINE_TRACE_LITERAL([HAVE_DOPRNT])
++m4trace:configure.in:258: -1- m4_pattern_allow([^HAVE_DOPRNT$])
++m4trace:configure.in:258: -1- AH_OUTPUT([HAVE_DOPRNT], [/* Define to 1 if you don\'t have `vprintf\' but do have `_doprnt.\' */
++@%:@undef HAVE_DOPRNT])
++m4trace:configure.in:264: -1- AH_OUTPUT([HAVE_MEMMOVE], [/* Define to 1 if you have the `memmove\' function. */
++@%:@undef HAVE_MEMMOVE])
++m4trace:configure.in:264: -1- AC_DEFINE_TRACE_LITERAL([HAVE_MEMMOVE])
++m4trace:configure.in:264: -1- m4_pattern_allow([^HAVE_MEMMOVE$])
++m4trace:configure.in:272: -1- AC_SUBST([XLIB])
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++m4trace:configure.in:272: -1- AC_DEFINE_TRACE_LITERAL([PLD_xwin])
++m4trace:configure.in:272: -1- m4_pattern_allow([^PLD_xwin$])
++m4trace:configure.in:277: -1- AH_OUTPUT([HAVE_LIBM], [/* Define to 1 if you have the `m\' library (-lm). */
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++m4trace:configure.in:277: -1- AC_DEFINE_TRACE_LITERAL([HAVE_LIBM])
++m4trace:configure.in:277: -1- m4_pattern_allow([^HAVE_LIBM$])
++m4trace:configure.in:284: -1- AM_CONDITIONAL([AMPNG], [false])
++m4trace:configure.in:284: -1- AC_SUBST([AMPNG_TRUE])
++m4trace:configure.in:284: -1- AC_SUBST_TRACE([AMPNG_TRUE])
++m4trace:configure.in:284: -1- m4_pattern_allow([^AMPNG_TRUE$])
++m4trace:configure.in:284: -1- AC_SUBST([AMPNG_FALSE])
++m4trace:configure.in:284: -1- AC_SUBST_TRACE([AMPNG_FALSE])
++m4trace:configure.in:284: -1- m4_pattern_allow([^AMPNG_FALSE$])
++m4trace:configure.in:284: -1- _AM_SUBST_NOTMAKE([AMPNG_TRUE])
++m4trace:configure.in:284: -1- _AM_SUBST_NOTMAKE([AMPNG_FALSE])
++m4trace:configure.in:285: -1- AM_CONDITIONAL([AMPDF], [false])
++m4trace:configure.in:285: -1- AC_SUBST([AMPDF_TRUE])
++m4trace:configure.in:285: -1- AC_SUBST_TRACE([AMPDF_TRUE])
++m4trace:configure.in:285: -1- m4_pattern_allow([^AMPDF_TRUE$])
++m4trace:configure.in:285: -1- AC_SUBST([AMPDF_FALSE])
++m4trace:configure.in:285: -1- AC_SUBST_TRACE([AMPDF_FALSE])
++m4trace:configure.in:285: -1- m4_pattern_allow([^AMPDF_FALSE$])
++m4trace:configure.in:285: -1- _AM_SUBST_NOTMAKE([AMPDF_TRUE])
++m4trace:configure.in:285: -1- _AM_SUBST_NOTMAKE([AMPDF_FALSE])
++m4trace:configure.in:288: -1- AC_SUBST([havejavac])
++m4trace:configure.in:288: -1- AC_SUBST_TRACE([havejavac])
++m4trace:configure.in:288: -1- m4_pattern_allow([^havejavac$])
++m4trace:configure.in:288: -1- AC_SUBST([JAVA_OK])
++m4trace:configure.in:288: -1- AC_SUBST_TRACE([JAVA_OK])
++m4trace:configure.in:288: -1- m4_pattern_allow([^JAVA_OK$])
++m4trace:configure.in:288: -1- AC_SUBST([JAVA_OK])
++m4trace:configure.in:288: -1- AC_SUBST_TRACE([JAVA_OK])
++m4trace:configure.in:288: -1- m4_pattern_allow([^JAVA_OK$])
++m4trace:configure.in:290: -1- AC_DEFINE_TRACE_LITERAL([PLD_pdf])
++m4trace:configure.in:290: -1- m4_pattern_allow([^PLD_pdf$])
++m4trace:configure.in:290: -1- AM_CONDITIONAL([AMPDF], [true])
++m4trace:configure.in:290: -1- AC_SUBST([AMPDF_TRUE])
++m4trace:configure.in:290: -1- AC_SUBST_TRACE([AMPDF_TRUE])
++m4trace:configure.in:290: -1- m4_pattern_allow([^AMPDF_TRUE$])
++m4trace:configure.in:290: -1- AC_SUBST([AMPDF_FALSE])
++m4trace:configure.in:290: -1- AC_SUBST_TRACE([AMPDF_FALSE])
++m4trace:configure.in:290: -1- m4_pattern_allow([^AMPDF_FALSE$])
++m4trace:configure.in:290: -1- _AM_SUBST_NOTMAKE([AMPDF_TRUE])
++m4trace:configure.in:290: -1- _AM_SUBST_NOTMAKE([AMPDF_FALSE])
++m4trace:configure.in:290: -1- AM_CONDITIONAL([AMPDF], [false])
++m4trace:configure.in:290: -1- AC_SUBST([AMPDF_TRUE])
++m4trace:configure.in:290: -1- AC_SUBST_TRACE([AMPDF_TRUE])
++m4trace:configure.in:290: -1- m4_pattern_allow([^AMPDF_TRUE$])
++m4trace:configure.in:290: -1- AC_SUBST([AMPDF_FALSE])
++m4trace:configure.in:290: -1- AC_SUBST_TRACE([AMPDF_FALSE])
++m4trace:configure.in:290: -1- m4_pattern_allow([^AMPDF_FALSE$])
++m4trace:configure.in:290: -1- _AM_SUBST_NOTMAKE([AMPDF_TRUE])
++m4trace:configure.in:290: -1- _AM_SUBST_NOTMAKE([AMPDF_FALSE])
++m4trace:configure.in:291: -1- AC_DEFINE_TRACE_LITERAL([PLPLOT_H])
++m4trace:configure.in:291: -1- m4_pattern_allow([^PLPLOT_H$])
++m4trace:configure.in:291: -1- AH_OUTPUT([PLPLOT_H], [/* PLPlot header filename. */
++@%:@undef PLPLOT_H])
++m4trace:configure.in:291: -1- AC_DEFINE_TRACE_LITERAL([PLPLOTP_H])
++m4trace:configure.in:291: -1- m4_pattern_allow([^PLPLOTP_H$])
++m4trace:configure.in:291: -1- AH_OUTPUT([PLPLOTP_H], [/* PLPlot private header filename. */
++@%:@undef PLPLOTP_H])
++m4trace:configure.in:291: -1- AC_DEFINE_TRACE_LITERAL([PLPLOT_H])
++m4trace:configure.in:291: -1- m4_pattern_allow([^PLPLOT_H$])
++m4trace:configure.in:291: -1- AH_OUTPUT([PLPLOT_H], [/* PLPlot header filename. */
++@%:@undef PLPLOT_H])
++m4trace:configure.in:291: -1- AC_DEFINE_TRACE_LITERAL([PLPLOTP_H])
++m4trace:configure.in:291: -1- m4_pattern_allow([^PLPLOTP_H$])
++m4trace:configure.in:291: -1- AH_OUTPUT([PLPLOTP_H], [/* PLPlot private header filename. */
++@%:@undef PLPLOTP_H])
++m4trace:configure.in:291: -1- AC_DEFINE_TRACE_LITERAL([PLPLOT_H])
++m4trace:configure.in:291: -1- m4_pattern_allow([^PLPLOT_H$])
++m4trace:configure.in:291: -1- AH_OUTPUT([PLPLOT_H], [/* PLPlot header filename. */
++@%:@undef PLPLOT_H])
++m4trace:configure.in:291: -1- AC_DEFINE_TRACE_LITERAL([PLPLOTP_H])
++m4trace:configure.in:291: -1- m4_pattern_allow([^PLPLOTP_H$])
++m4trace:configure.in:291: -1- AH_OUTPUT([PLPLOTP_H], [/* PLPlot private header filename. */
++@%:@undef PLPLOTP_H])
++m4trace:configure.in:291: -1- AC_DEFINE_TRACE_LITERAL([PLPLOT_H])
++m4trace:configure.in:291: -1- m4_pattern_allow([^PLPLOT_H$])
++m4trace:configure.in:291: -1- AH_OUTPUT([PLPLOT_H], [/* PLPlot header filename. */
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++m4trace:configure.in:291: -1- AC_DEFINE_TRACE_LITERAL([PLPLOTP_H])
++m4trace:configure.in:291: -1- m4_pattern_allow([^PLPLOTP_H$])
++m4trace:configure.in:291: -1- AH_OUTPUT([PLPLOTP_H], [/* PLPlot private header filename. */
++@%:@undef PLPLOTP_H])
++m4trace:configure.in:291: -1- AH_OUTPUT([HAVE_LIBPLPLOTD], [/* Define to 1 if you have the `plplotd\' library (-lplplotd). */
++@%:@undef HAVE_LIBPLPLOTD])
++m4trace:configure.in:291: -1- AC_DEFINE_TRACE_LITERAL([HAVE_LIBPLPLOTD])
++m4trace:configure.in:291: -1- m4_pattern_allow([^HAVE_LIBPLPLOTD$])
++m4trace:configure.in:291: -1- AH_OUTPUT([HAVE_LIBPLPLOTD], [/* Define to 1 if you have the `plplotd\' library (-lplplotd). */
++@%:@undef HAVE_LIBPLPLOTD])
++m4trace:configure.in:291: -1- AC_DEFINE_TRACE_LITERAL([HAVE_LIBPLPLOTD])
++m4trace:configure.in:291: -1- m4_pattern_allow([^HAVE_LIBPLPLOTD$])
++m4trace:configure.in:291: -1- AC_SUBST([PLPLOT_CFLAGS])
++m4trace:configure.in:291: -1- AC_SUBST_TRACE([PLPLOT_CFLAGS])
++m4trace:configure.in:291: -1- m4_pattern_allow([^PLPLOT_CFLAGS$])
++m4trace:configure.in:291: -1- AC_SUBST([PLPLOT_LIBS])
++m4trace:configure.in:291: -1- AC_SUBST_TRACE([PLPLOT_LIBS])
++m4trace:configure.in:291: -1- m4_pattern_allow([^PLPLOT_LIBS$])
++m4trace:configure.in:291: -1- AC_DEFINE_TRACE_LITERAL([HAVE_PLPLOT])
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++m4trace:configure.in:291: -1- AH_OUTPUT([HAVE_PLPLOT], [/* Define if you have the PLPlot libraries and header files. */
++@%:@undef HAVE_PLPLOT])
++m4trace:configure.in:292: -1- AC_DEFINE_TRACE_LITERAL([PLD_png])
++m4trace:configure.in:292: -1- m4_pattern_allow([^PLD_png$])
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++m4trace:configure.in:292: -1- AC_SUBST_TRACE([AMPNG_TRUE])
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++m4trace:configure.in:296: -1- AC_SUBST([MYSQL_CONFIG])
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++m4trace:configure.in:296: -1- AH_OUTPUT([HAVE_MYSQL], [/* Define to 1 if MySQL libraries are available */
++@%:@undef HAVE_MYSQL])
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++m4trace:configure.in:296: -1- AC_SUBST([MYSQL_LDFLAGS])
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++@%:@undef HAVE_POSTGRESQL])
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++m4trace:configure.in:315: -1- AC_SUBST([HAVE_MEMMOVE])
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++m4trace:configure.in:316: -1- AC_SUBST([HAVE_STRERROR])
++m4trace:configure.in:316: -1- AC_SUBST_TRACE([HAVE_STRERROR])
++m4trace:configure.in:316: -1- m4_pattern_allow([^HAVE_STRERROR$])
++m4trace:configure.in:317: -1- AC_SUBST([PCRE_MAJOR])
++m4trace:configure.in:317: -1- AC_SUBST_TRACE([PCRE_MAJOR])
++m4trace:configure.in:317: -1- m4_pattern_allow([^PCRE_MAJOR$])
++m4trace:configure.in:318: -1- AC_SUBST([PCRE_MINOR])
++m4trace:configure.in:318: -1- AC_SUBST_TRACE([PCRE_MINOR])
++m4trace:configure.in:318: -1- m4_pattern_allow([^PCRE_MINOR$])
++m4trace:configure.in:319: -1- AC_SUBST([PCRE_DATE])
++m4trace:configure.in:319: -1- AC_SUBST_TRACE([PCRE_DATE])
++m4trace:configure.in:319: -1- m4_pattern_allow([^PCRE_DATE$])
++m4trace:configure.in:320: -1- AC_SUBST([PCRE_VERSION])
++m4trace:configure.in:320: -1- AC_SUBST_TRACE([PCRE_VERSION])
++m4trace:configure.in:320: -1- m4_pattern_allow([^PCRE_VERSION$])
++m4trace:configure.in:321: -1- AC_SUBST([PCRE_LIB_VERSION])
++m4trace:configure.in:321: -1- AC_SUBST_TRACE([PCRE_LIB_VERSION])
++m4trace:configure.in:321: -1- m4_pattern_allow([^PCRE_LIB_VERSION$])
++m4trace:configure.in:322: -1- AC_SUBST([PCRE_POSIXLIB_VERSION])
++m4trace:configure.in:322: -1- AC_SUBST_TRACE([PCRE_POSIXLIB_VERSION])
++m4trace:configure.in:322: -1- m4_pattern_allow([^PCRE_POSIXLIB_VERSION$])
++m4trace:configure.in:323: -1- AC_SUBST([POSIX_MALLOC_THRESHOLD])
++m4trace:configure.in:323: -1- AC_SUBST_TRACE([POSIX_MALLOC_THRESHOLD])
++m4trace:configure.in:323: -1- m4_pattern_allow([^POSIX_MALLOC_THRESHOLD$])
++m4trace:configure.in:427: -1- AH_OUTPUT([HAVE_LIBPCRE], [/* Define to 1 if you have the `pcre\' library (-lpcre). */
++@%:@undef HAVE_LIBPCRE])
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++m4trace:configure.in:428: -1- AH_OUTPUT([HAVE_LIBEXPAT], [/* Define to 1 if you have the `expat\' library (-lexpat). */
++@%:@undef HAVE_LIBEXPAT])
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++m4trace:configure.in:466: -1- AC_SUBST([WARN_CFLAGS])
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++m4trace:configure.in:476: -1- AM_CONDITIONAL([WARNINGS], [test "$have_warnings" = "yes"])
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++m4trace:configure.in:476: -1- AC_SUBST_TRACE([WARNINGS_FALSE])
++m4trace:configure.in:476: -1- m4_pattern_allow([^WARNINGS_FALSE$])
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++m4trace:configure.in:486: -1- AM_CONDITIONAL([PURIFY], [test "${enable_purify}" = "yes"])
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++m4trace:configure.in:486: -1- _AM_SUBST_NOTMAKE([PURIFY_TRUE])
++m4trace:configure.in:486: -1- _AM_SUBST_NOTMAKE([PURIFY_FALSE])
++m4trace:configure.in:491: -1- AM_CONDITIONAL([ISGCC], [test "$CC" = "gcc"])
++m4trace:configure.in:491: -1- AC_SUBST([ISGCC_TRUE])
++m4trace:configure.in:491: -1- AC_SUBST_TRACE([ISGCC_TRUE])
++m4trace:configure.in:491: -1- m4_pattern_allow([^ISGCC_TRUE$])
++m4trace:configure.in:491: -1- AC_SUBST([ISGCC_FALSE])
++m4trace:configure.in:491: -1- AC_SUBST_TRACE([ISGCC_FALSE])
++m4trace:configure.in:491: -1- m4_pattern_allow([^ISGCC_FALSE$])
++m4trace:configure.in:491: -1- _AM_SUBST_NOTMAKE([ISGCC_TRUE])
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++m4trace:configure.in:501: -1- AC_SUBST([DEVWARN_CFLAGS])
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++m4trace:configure.in:501: -1- m4_pattern_allow([^DEVWARN_CFLAGS$])
++m4trace:configure.in:570: -1- AM_CONDITIONAL([DEVWARNINGS], [test "$have_devwarnings" = "yes"])
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++m4trace:configure.in:570: -1- m4_pattern_allow([^DEVWARNINGS_TRUE$])
++m4trace:configure.in:570: -1- AC_SUBST([DEVWARNINGS_FALSE])
++m4trace:configure.in:570: -1- AC_SUBST_TRACE([DEVWARNINGS_FALSE])
++m4trace:configure.in:570: -1- m4_pattern_allow([^DEVWARNINGS_FALSE$])
++m4trace:configure.in:570: -1- _AM_SUBST_NOTMAKE([DEVWARNINGS_TRUE])
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++m4trace:configure.in:571: -1- AC_SUBST_TRACE([DEVWARNINGS])
++m4trace:configure.in:571: -1- m4_pattern_allow([^DEVWARNINGS$])
++m4trace:configure.in:587: -1- AM_CONDITIONAL([ISCYGWIN], [test "$platform_cygwin" = "yes"])
++m4trace:configure.in:587: -1- AC_SUBST([ISCYGWIN_TRUE])
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++m4trace:configure.in:587: -1- m4_pattern_allow([^ISCYGWIN_TRUE$])
++m4trace:configure.in:587: -1- AC_SUBST([ISCYGWIN_FALSE])
++m4trace:configure.in:587: -1- AC_SUBST_TRACE([ISCYGWIN_FALSE])
++m4trace:configure.in:587: -1- m4_pattern_allow([^ISCYGWIN_FALSE$])
++m4trace:configure.in:587: -1- _AM_SUBST_NOTMAKE([ISCYGWIN_TRUE])
++m4trace:configure.in:587: -1- _AM_SUBST_NOTMAKE([ISCYGWIN_FALSE])
++m4trace:configure.in:588: -1- AC_SUBST([ISCYGWIN])
++m4trace:configure.in:588: -1- AC_SUBST_TRACE([ISCYGWIN])
++m4trace:configure.in:588: -1- m4_pattern_allow([^ISCYGWIN$])
++m4trace:configure.in:595: -1- AM_CONDITIONAL([ISAIXIA64], [test "`uname`" = "AIX"])
++m4trace:configure.in:595: -1- AC_SUBST([ISAIXIA64_TRUE])
++m4trace:configure.in:595: -1- AC_SUBST_TRACE([ISAIXIA64_TRUE])
++m4trace:configure.in:595: -1- m4_pattern_allow([^ISAIXIA64_TRUE$])
++m4trace:configure.in:595: -1- AC_SUBST([ISAIXIA64_FALSE])
++m4trace:configure.in:595: -1- AC_SUBST_TRACE([ISAIXIA64_FALSE])
++m4trace:configure.in:595: -1- m4_pattern_allow([^ISAIXIA64_FALSE$])
++m4trace:configure.in:595: -1- _AM_SUBST_NOTMAKE([ISAIXIA64_TRUE])
++m4trace:configure.in:595: -1- _AM_SUBST_NOTMAKE([ISAIXIA64_FALSE])
++m4trace:configure.in:596: -1- AM_CONDITIONAL([ISSHARED], [test "${enable_shared}" = "yes"])
++m4trace:configure.in:596: -1- AC_SUBST([ISSHARED_TRUE])
++m4trace:configure.in:596: -1- AC_SUBST_TRACE([ISSHARED_TRUE])
++m4trace:configure.in:596: -1- m4_pattern_allow([^ISSHARED_TRUE$])
++m4trace:configure.in:596: -1- AC_SUBST([ISSHARED_FALSE])
++m4trace:configure.in:596: -1- AC_SUBST_TRACE([ISSHARED_FALSE])
++m4trace:configure.in:596: -1- m4_pattern_allow([^ISSHARED_FALSE$])
++m4trace:configure.in:596: -1- _AM_SUBST_NOTMAKE([ISSHARED_TRUE])
++m4trace:configure.in:596: -1- _AM_SUBST_NOTMAKE([ISSHARED_FALSE])
++m4trace:configure.in:597: -1- AC_SUBST([ISAIXIA64])
++m4trace:configure.in:597: -1- AC_SUBST_TRACE([ISAIXIA64])
++m4trace:configure.in:597: -1- m4_pattern_allow([^ISAIXIA64$])
++m4trace:configure.in:616: -1- AM_CONDITIONAL([NEEDAJAX], [test "$needajax" = "yes"])
++m4trace:configure.in:616: -1- AC_SUBST([NEEDAJAX_TRUE])
++m4trace:configure.in:616: -1- AC_SUBST_TRACE([NEEDAJAX_TRUE])
++m4trace:configure.in:616: -1- m4_pattern_allow([^NEEDAJAX_TRUE$])
++m4trace:configure.in:616: -1- AC_SUBST([NEEDAJAX_FALSE])
++m4trace:configure.in:616: -1- AC_SUBST_TRACE([NEEDAJAX_FALSE])
++m4trace:configure.in:616: -1- m4_pattern_allow([^NEEDAJAX_FALSE$])
++m4trace:configure.in:616: -1- _AM_SUBST_NOTMAKE([NEEDAJAX_TRUE])
++m4trace:configure.in:616: -1- _AM_SUBST_NOTMAKE([NEEDAJAX_FALSE])
++m4trace:configure.in:617: -1- AC_SUBST([NEEDAJAX])
++m4trace:configure.in:617: -1- AC_SUBST_TRACE([NEEDAJAX])
++m4trace:configure.in:617: -1- m4_pattern_allow([^NEEDAJAX$])
++m4trace:configure.in:664: -1- AC_CONFIG_FILES([nucleus/Makefile ajax/Makefile
++ajax/core/Makefile
++ajax/graphics/Makefile ajax/ensembl/Makefile ajax/ajaxdb/Makefile
++ajax/acd/Makefile
++emboss/Makefile emboss/acd/Makefile test/Makefile test/data/Makefile
++test/embl/Makefile test/genbank/Makefile
++test/pir/Makefile test/swiss/Makefile
++test/swnew/Makefile test/testdb/Makefile
++emboss/data/Makefile
++emboss/data/AAINDEX/Makefile
++emboss/data/CODONS/Makefile emboss/data/REBASE/Makefile
++emboss/data/JASPAR_CORE/Makefile emboss/data/JASPAR_FAM/Makefile
++emboss/data/JASPAR_PHYLOFACTS/Makefile emboss/data/JASPAR_CNE/Makefile
++emboss/data/JASPAR_POLII/Makefile emboss/data/JASPAR_SPLICE/Makefile
++emboss/data/JASPAR_PBM/Makefile emboss/data/JASPAR_PBM_HLH/Makefile
++emboss/data/JASPAR_PBM_HOMEO/Makefile
++emboss/data/PRINTS/Makefile emboss/data/PROSITE/Makefile
++doc/Makefile doc/manuals/Makefile doc/tutorials/Makefile
++doc/programs/Makefile doc/programs/html/Makefile doc/programs/text/Makefile
++jemboss/Makefile
++jemboss/images/Makefile
++jemboss/lib/Makefile jemboss/lib/axis/Makefile
++jemboss/resources/Makefile jemboss/utils/Makefile
++Makefile])
++m4trace:configure.in:664: -1- _m4_warn([obsolete], [AC_OUTPUT should be used without arguments.
++You should run autoupdate.], [])
++m4trace:configure.in:664: -1- AC_SUBST([LIB@&t at OBJS], [$ac_libobjs])
++m4trace:configure.in:664: -1- AC_SUBST_TRACE([LIB@&t at OBJS])
++m4trace:configure.in:664: -1- m4_pattern_allow([^LIB@&t at OBJS$])
++m4trace:configure.in:664: -1- AC_SUBST([LTLIBOBJS], [$ac_ltlibobjs])
++m4trace:configure.in:664: -1- AC_SUBST_TRACE([LTLIBOBJS])
++m4trace:configure.in:664: -1- m4_pattern_allow([^LTLIBOBJS$])
++m4trace:configure.in:664: -1- AM_CONDITIONAL([am__EXEEXT], [test -n "$EXEEXT"])
++m4trace:configure.in:664: -1- AC_SUBST([am__EXEEXT_TRUE])
++m4trace:configure.in:664: -1- AC_SUBST_TRACE([am__EXEEXT_TRUE])
++m4trace:configure.in:664: -1- m4_pattern_allow([^am__EXEEXT_TRUE$])
++m4trace:configure.in:664: -1- AC_SUBST([am__EXEEXT_FALSE])
++m4trace:configure.in:664: -1- AC_SUBST_TRACE([am__EXEEXT_FALSE])
++m4trace:configure.in:664: -1- m4_pattern_allow([^am__EXEEXT_FALSE$])
++m4trace:configure.in:664: -1- _AM_SUBST_NOTMAKE([am__EXEEXT_TRUE])
++m4trace:configure.in:664: -1- _AM_SUBST_NOTMAKE([am__EXEEXT_FALSE])
++m4trace:configure.in:664: -1- _m4_warn([obsolete], [AC_C_BIGENDIAN should be used with AC_CONFIG_HEADERS], [])
++m4trace:configure.in:664: -1- AC_SUBST_TRACE([top_builddir])
++m4trace:configure.in:664: -1- AC_SUBST_TRACE([top_build_prefix])
++m4trace:configure.in:664: -1- AC_SUBST_TRACE([srcdir])
++m4trace:configure.in:664: -1- AC_SUBST_TRACE([abs_srcdir])
++m4trace:configure.in:664: -1- AC_SUBST_TRACE([top_srcdir])
++m4trace:configure.in:664: -1- AC_SUBST_TRACE([abs_top_srcdir])
++m4trace:configure.in:664: -1- AC_SUBST_TRACE([builddir])
++m4trace:configure.in:664: -1- AC_SUBST_TRACE([abs_builddir])
++m4trace:configure.in:664: -1- AC_SUBST_TRACE([abs_top_builddir])
++m4trace:configure.in:664: -1- AC_SUBST_TRACE([INSTALL])
++m4trace:configure.in:664: -1- AC_SUBST_TRACE([MKDIR_P])
++m4trace:configure.in:664: -1- AC_REQUIRE_AUX_FILE([ltmain.sh])
+diff -urP EMBOSS-6.3.1.orig/doc/Makefile.in EMBOSS-6.3.1/doc/Makefile.in
+--- EMBOSS-6.3.1.orig/doc/Makefile.in 2010-07-19 07:55:40.000000000 -0400
++++ EMBOSS-6.3.1/doc/Makefile.in 2010-08-02 17:23:23.593142800 -0400
+@@ -39,9 +39,9 @@
+ am__aclocal_m4_deps = $(top_srcdir)/m4/amd64.m4 \
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+- $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pngdriver.m4 \
+- $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+- $(top_srcdir)/configure.in
++ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
++ $(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/postgresql.m4 \
++ $(top_srcdir)/m4/sgi.m4 $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+ $(ACLOCAL_M4)
+ mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
+@@ -167,6 +167,8 @@
+ PCRE_POSIXLIB_VERSION = @PCRE_POSIXLIB_VERSION@
+ PCRE_VERSION = @PCRE_VERSION@
+ PG_CONFIG = @PG_CONFIG@
++PLPLOT_CFLAGS = @PLPLOT_CFLAGS@
++PLPLOT_LIBS = @PLPLOT_LIBS@
+ POSIX_MALLOC_THRESHOLD = @POSIX_MALLOC_THRESHOLD@
+ POSTGRESQL_CFLAGS = @POSTGRESQL_CFLAGS@
+ POSTGRESQL_LDFLAGS = @POSTGRESQL_LDFLAGS@
+@@ -253,9 +255,9 @@
+ exit 1;; \
+ esac; \
+ done; \
+- echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu doc/Makefile'; \
++ echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnits doc/Makefile'; \
+ $(am__cd) $(top_srcdir) && \
+- $(AUTOMAKE) --gnu doc/Makefile
++ $(AUTOMAKE) --gnits doc/Makefile
+ .PRECIOUS: Makefile
+ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+ @case '$?' in \
+diff -urP EMBOSS-6.3.1.orig/doc/manuals/Makefile.in EMBOSS-6.3.1/doc/manuals/Makefile.in
+--- EMBOSS-6.3.1.orig/doc/manuals/Makefile.in 2010-07-19 07:55:40.000000000 -0400
++++ EMBOSS-6.3.1/doc/manuals/Makefile.in 2010-08-02 17:23:23.661142730 -0400
+@@ -39,9 +39,9 @@
+ am__aclocal_m4_deps = $(top_srcdir)/m4/amd64.m4 \
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+- $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pngdriver.m4 \
+- $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+- $(top_srcdir)/configure.in
++ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
++ $(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/postgresql.m4 \
++ $(top_srcdir)/m4/sgi.m4 $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+ $(ACLOCAL_M4)
+ mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
+@@ -151,6 +151,8 @@
+ PCRE_POSIXLIB_VERSION = @PCRE_POSIXLIB_VERSION@
+ PCRE_VERSION = @PCRE_VERSION@
+ PG_CONFIG = @PG_CONFIG@
++PLPLOT_CFLAGS = @PLPLOT_CFLAGS@
++PLPLOT_LIBS = @PLPLOT_LIBS@
+ POSIX_MALLOC_THRESHOLD = @POSIX_MALLOC_THRESHOLD@
+ POSTGRESQL_CFLAGS = @POSTGRESQL_CFLAGS@
+ POSTGRESQL_LDFLAGS = @POSTGRESQL_LDFLAGS@
+@@ -241,9 +243,9 @@
+ exit 1;; \
+ esac; \
+ done; \
+- echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu doc/manuals/Makefile'; \
++ echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnits doc/manuals/Makefile'; \
+ $(am__cd) $(top_srcdir) && \
+- $(AUTOMAKE) --gnu doc/manuals/Makefile
++ $(AUTOMAKE) --gnits doc/manuals/Makefile
+ .PRECIOUS: Makefile
+ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+ @case '$?' in \
+diff -urP EMBOSS-6.3.1.orig/doc/programs/html/Makefile.in EMBOSS-6.3.1/doc/programs/html/Makefile.in
+--- EMBOSS-6.3.1.orig/doc/programs/html/Makefile.in 2010-07-19 07:55:40.000000000 -0400
++++ EMBOSS-6.3.1/doc/programs/html/Makefile.in 2010-08-02 17:23:23.811143149 -0400
+@@ -39,9 +39,9 @@
+ am__aclocal_m4_deps = $(top_srcdir)/m4/amd64.m4 \
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+- $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pngdriver.m4 \
+- $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+- $(top_srcdir)/configure.in
++ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
++ $(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/postgresql.m4 \
++ $(top_srcdir)/m4/sgi.m4 $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+ $(ACLOCAL_M4)
+ mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
+@@ -151,6 +151,8 @@
+ PCRE_POSIXLIB_VERSION = @PCRE_POSIXLIB_VERSION@
+ PCRE_VERSION = @PCRE_VERSION@
+ PG_CONFIG = @PG_CONFIG@
++PLPLOT_CFLAGS = @PLPLOT_CFLAGS@
++PLPLOT_LIBS = @PLPLOT_LIBS@
+ POSIX_MALLOC_THRESHOLD = @POSIX_MALLOC_THRESHOLD@
+ POSTGRESQL_CFLAGS = @POSTGRESQL_CFLAGS@
+ POSTGRESQL_LDFLAGS = @POSTGRESQL_LDFLAGS@
+@@ -352,9 +354,9 @@
+ exit 1;; \
+ esac; \
+ done; \
+- echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu doc/programs/html/Makefile'; \
++ echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnits doc/programs/html/Makefile'; \
+ $(am__cd) $(top_srcdir) && \
+- $(AUTOMAKE) --gnu doc/programs/html/Makefile
++ $(AUTOMAKE) --gnits doc/programs/html/Makefile
+ .PRECIOUS: Makefile
+ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+ @case '$?' in \
+diff -urP EMBOSS-6.3.1.orig/doc/programs/Makefile.in EMBOSS-6.3.1/doc/programs/Makefile.in
+--- EMBOSS-6.3.1.orig/doc/programs/Makefile.in 2010-07-19 07:55:40.000000000 -0400
++++ EMBOSS-6.3.1/doc/programs/Makefile.in 2010-08-02 17:23:23.730143289 -0400
+@@ -39,9 +39,9 @@
+ am__aclocal_m4_deps = $(top_srcdir)/m4/amd64.m4 \
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+- $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pngdriver.m4 \
+- $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+- $(top_srcdir)/configure.in
++ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
++ $(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/postgresql.m4 \
++ $(top_srcdir)/m4/sgi.m4 $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+ $(ACLOCAL_M4)
+ mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
+@@ -167,6 +167,8 @@
+ PCRE_POSIXLIB_VERSION = @PCRE_POSIXLIB_VERSION@
+ PCRE_VERSION = @PCRE_VERSION@
+ PG_CONFIG = @PG_CONFIG@
++PLPLOT_CFLAGS = @PLPLOT_CFLAGS@
++PLPLOT_LIBS = @PLPLOT_LIBS@
+ POSIX_MALLOC_THRESHOLD = @POSIX_MALLOC_THRESHOLD@
+ POSTGRESQL_CFLAGS = @POSTGRESQL_CFLAGS@
+ POSTGRESQL_LDFLAGS = @POSTGRESQL_LDFLAGS@
+@@ -253,9 +255,9 @@
+ exit 1;; \
+ esac; \
+ done; \
+- echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu doc/programs/Makefile'; \
++ echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnits doc/programs/Makefile'; \
+ $(am__cd) $(top_srcdir) && \
+- $(AUTOMAKE) --gnu doc/programs/Makefile
++ $(AUTOMAKE) --gnits doc/programs/Makefile
+ .PRECIOUS: Makefile
+ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+ @case '$?' in \
+diff -urP EMBOSS-6.3.1.orig/doc/programs/text/Makefile.in EMBOSS-6.3.1/doc/programs/text/Makefile.in
+--- EMBOSS-6.3.1.orig/doc/programs/text/Makefile.in 2010-07-19 07:55:40.000000000 -0400
++++ EMBOSS-6.3.1/doc/programs/text/Makefile.in 2010-08-02 17:23:23.888142800 -0400
+@@ -39,9 +39,9 @@
+ am__aclocal_m4_deps = $(top_srcdir)/m4/amd64.m4 \
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+- $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pngdriver.m4 \
+- $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+- $(top_srcdir)/configure.in
++ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
++ $(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/postgresql.m4 \
++ $(top_srcdir)/m4/sgi.m4 $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+ $(ACLOCAL_M4)
+ mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
+@@ -151,6 +151,8 @@
+ PCRE_POSIXLIB_VERSION = @PCRE_POSIXLIB_VERSION@
+ PCRE_VERSION = @PCRE_VERSION@
+ PG_CONFIG = @PG_CONFIG@
++PLPLOT_CFLAGS = @PLPLOT_CFLAGS@
++PLPLOT_LIBS = @PLPLOT_LIBS@
+ POSIX_MALLOC_THRESHOLD = @POSIX_MALLOC_THRESHOLD@
+ POSTGRESQL_CFLAGS = @POSTGRESQL_CFLAGS@
+ POSTGRESQL_LDFLAGS = @POSTGRESQL_LDFLAGS@
+@@ -298,9 +300,9 @@
+ exit 1;; \
+ esac; \
+ done; \
+- echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu doc/programs/text/Makefile'; \
++ echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnits doc/programs/text/Makefile'; \
+ $(am__cd) $(top_srcdir) && \
+- $(AUTOMAKE) --gnu doc/programs/text/Makefile
++ $(AUTOMAKE) --gnits doc/programs/text/Makefile
+ .PRECIOUS: Makefile
+ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+ @case '$?' in \
+diff -urP EMBOSS-6.3.1.orig/doc/tutorials/Makefile.in EMBOSS-6.3.1/doc/tutorials/Makefile.in
+--- EMBOSS-6.3.1.orig/doc/tutorials/Makefile.in 2010-07-19 07:55:40.000000000 -0400
++++ EMBOSS-6.3.1/doc/tutorials/Makefile.in 2010-08-02 17:23:23.956143149 -0400
+@@ -39,9 +39,9 @@
+ am__aclocal_m4_deps = $(top_srcdir)/m4/amd64.m4 \
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+- $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pngdriver.m4 \
+- $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+- $(top_srcdir)/configure.in
++ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
++ $(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/postgresql.m4 \
++ $(top_srcdir)/m4/sgi.m4 $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+ $(ACLOCAL_M4)
+ mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
+@@ -151,6 +151,8 @@
+ PCRE_POSIXLIB_VERSION = @PCRE_POSIXLIB_VERSION@
+ PCRE_VERSION = @PCRE_VERSION@
+ PG_CONFIG = @PG_CONFIG@
++PLPLOT_CFLAGS = @PLPLOT_CFLAGS@
++PLPLOT_LIBS = @PLPLOT_LIBS@
+ POSIX_MALLOC_THRESHOLD = @POSIX_MALLOC_THRESHOLD@
+ POSTGRESQL_CFLAGS = @POSTGRESQL_CFLAGS@
+ POSTGRESQL_LDFLAGS = @POSTGRESQL_LDFLAGS@
+@@ -239,9 +241,9 @@
+ exit 1;; \
+ esac; \
+ done; \
+- echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu doc/tutorials/Makefile'; \
++ echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnits doc/tutorials/Makefile'; \
+ $(am__cd) $(top_srcdir) && \
+- $(AUTOMAKE) --gnu doc/tutorials/Makefile
++ $(AUTOMAKE) --gnits doc/tutorials/Makefile
+ .PRECIOUS: Makefile
+ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+ @case '$?' in \
+diff -urP EMBOSS-6.3.1.orig/emboss/acd/Makefile.in EMBOSS-6.3.1/emboss/acd/Makefile.in
+--- EMBOSS-6.3.1.orig/emboss/acd/Makefile.in 2010-07-19 07:55:41.000000000 -0400
++++ EMBOSS-6.3.1/emboss/acd/Makefile.in 2010-08-02 17:23:24.995143010 -0400
+@@ -39,9 +39,9 @@
+ am__aclocal_m4_deps = $(top_srcdir)/m4/amd64.m4 \
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+- $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pngdriver.m4 \
+- $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+- $(top_srcdir)/configure.in
++ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
++ $(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/postgresql.m4 \
++ $(top_srcdir)/m4/sgi.m4 $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+ $(ACLOCAL_M4)
+ mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
+@@ -152,6 +152,8 @@
+ PCRE_POSIXLIB_VERSION = @PCRE_POSIXLIB_VERSION@
+ PCRE_VERSION = @PCRE_VERSION@
+ PG_CONFIG = @PG_CONFIG@
++PLPLOT_CFLAGS = @PLPLOT_CFLAGS@
++PLPLOT_LIBS = @PLPLOT_LIBS@
+ POSIX_MALLOC_THRESHOLD = @POSIX_MALLOC_THRESHOLD@
+ POSTGRESQL_CFLAGS = @POSTGRESQL_CFLAGS@
+ POSTGRESQL_LDFLAGS = @POSTGRESQL_LDFLAGS@
+@@ -308,9 +310,9 @@
+ exit 1;; \
+ esac; \
+ done; \
+- echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu emboss/acd/Makefile'; \
++ echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnits emboss/acd/Makefile'; \
+ $(am__cd) $(top_srcdir) && \
+- $(AUTOMAKE) --gnu emboss/acd/Makefile
++ $(AUTOMAKE) --gnits emboss/acd/Makefile
+ .PRECIOUS: Makefile
+ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+ @case '$?' in \
+diff -urP EMBOSS-6.3.1.orig/emboss/data/AAINDEX/Makefile.in EMBOSS-6.3.1/emboss/data/AAINDEX/Makefile.in
+--- EMBOSS-6.3.1.orig/emboss/data/AAINDEX/Makefile.in 2010-07-19 07:55:41.000000000 -0400
++++ EMBOSS-6.3.1/emboss/data/AAINDEX/Makefile.in 2010-08-02 17:23:25.066142730 -0400
+@@ -39,9 +39,9 @@
+ am__aclocal_m4_deps = $(top_srcdir)/m4/amd64.m4 \
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+- $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pngdriver.m4 \
+- $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+- $(top_srcdir)/configure.in
++ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
++ $(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/postgresql.m4 \
++ $(top_srcdir)/m4/sgi.m4 $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+ $(ACLOCAL_M4)
+ mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
+@@ -151,6 +151,8 @@
+ PCRE_POSIXLIB_VERSION = @PCRE_POSIXLIB_VERSION@
+ PCRE_VERSION = @PCRE_VERSION@
+ PG_CONFIG = @PG_CONFIG@
++PLPLOT_CFLAGS = @PLPLOT_CFLAGS@
++PLPLOT_LIBS = @PLPLOT_LIBS@
+ POSIX_MALLOC_THRESHOLD = @POSIX_MALLOC_THRESHOLD@
+ POSTGRESQL_CFLAGS = @POSTGRESQL_CFLAGS@
+ POSTGRESQL_LDFLAGS = @POSTGRESQL_LDFLAGS@
+@@ -237,9 +239,9 @@
+ exit 1;; \
+ esac; \
+ done; \
+- echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu emboss/data/AAINDEX/Makefile'; \
++ echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnits emboss/data/AAINDEX/Makefile'; \
+ $(am__cd) $(top_srcdir) && \
+- $(AUTOMAKE) --gnu emboss/data/AAINDEX/Makefile
++ $(AUTOMAKE) --gnits emboss/data/AAINDEX/Makefile
+ .PRECIOUS: Makefile
+ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+ @case '$?' in \
+diff -urP EMBOSS-6.3.1.orig/emboss/data/CODONS/Makefile.in EMBOSS-6.3.1/emboss/data/CODONS/Makefile.in
+--- EMBOSS-6.3.1.orig/emboss/data/CODONS/Makefile.in 2010-07-19 07:55:41.000000000 -0400
++++ EMBOSS-6.3.1/emboss/data/CODONS/Makefile.in 2010-08-02 17:23:25.144143079 -0400
+@@ -39,9 +39,9 @@
+ am__aclocal_m4_deps = $(top_srcdir)/m4/amd64.m4 \
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+- $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pngdriver.m4 \
+- $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+- $(top_srcdir)/configure.in
++ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
++ $(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/postgresql.m4 \
++ $(top_srcdir)/m4/sgi.m4 $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+ $(ACLOCAL_M4)
+ mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
+@@ -151,6 +151,8 @@
+ PCRE_POSIXLIB_VERSION = @PCRE_POSIXLIB_VERSION@
+ PCRE_VERSION = @PCRE_VERSION@
+ PG_CONFIG = @PG_CONFIG@
++PLPLOT_CFLAGS = @PLPLOT_CFLAGS@
++PLPLOT_LIBS = @PLPLOT_LIBS@
+ POSIX_MALLOC_THRESHOLD = @POSIX_MALLOC_THRESHOLD@
+ POSTGRESQL_CFLAGS = @POSTGRESQL_CFLAGS@
+ POSTGRESQL_LDFLAGS = @POSTGRESQL_LDFLAGS@
+@@ -296,9 +298,9 @@
+ exit 1;; \
+ esac; \
+ done; \
+- echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu emboss/data/CODONS/Makefile'; \
++ echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnits emboss/data/CODONS/Makefile'; \
+ $(am__cd) $(top_srcdir) && \
+- $(AUTOMAKE) --gnu emboss/data/CODONS/Makefile
++ $(AUTOMAKE) --gnits emboss/data/CODONS/Makefile
+ .PRECIOUS: Makefile
+ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+ @case '$?' in \
+diff -urP EMBOSS-6.3.1.orig/emboss/data/JASPAR_CNE/Makefile.in EMBOSS-6.3.1/emboss/data/JASPAR_CNE/Makefile.in
+--- EMBOSS-6.3.1.orig/emboss/data/JASPAR_CNE/Makefile.in 2010-07-19 07:55:41.000000000 -0400
++++ EMBOSS-6.3.1/emboss/data/JASPAR_CNE/Makefile.in 2010-08-02 17:23:25.214143219 -0400
+@@ -39,9 +39,9 @@
+ am__aclocal_m4_deps = $(top_srcdir)/m4/amd64.m4 \
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+- $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pngdriver.m4 \
+- $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+- $(top_srcdir)/configure.in
++ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
++ $(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/postgresql.m4 \
++ $(top_srcdir)/m4/sgi.m4 $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+ $(ACLOCAL_M4)
+ mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
+@@ -151,6 +151,8 @@
+ PCRE_POSIXLIB_VERSION = @PCRE_POSIXLIB_VERSION@
+ PCRE_VERSION = @PCRE_VERSION@
+ PG_CONFIG = @PG_CONFIG@
++PLPLOT_CFLAGS = @PLPLOT_CFLAGS@
++PLPLOT_LIBS = @PLPLOT_LIBS@
+ POSIX_MALLOC_THRESHOLD = @POSIX_MALLOC_THRESHOLD@
+ POSTGRESQL_CFLAGS = @POSTGRESQL_CFLAGS@
+ POSTGRESQL_LDFLAGS = @POSTGRESQL_LDFLAGS@
+@@ -237,9 +239,9 @@
+ exit 1;; \
+ esac; \
+ done; \
+- echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu emboss/data/JASPAR_CNE/Makefile'; \
++ echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnits emboss/data/JASPAR_CNE/Makefile'; \
+ $(am__cd) $(top_srcdir) && \
+- $(AUTOMAKE) --gnu emboss/data/JASPAR_CNE/Makefile
++ $(AUTOMAKE) --gnits emboss/data/JASPAR_CNE/Makefile
+ .PRECIOUS: Makefile
+ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+ @case '$?' in \
+diff -urP EMBOSS-6.3.1.orig/emboss/data/JASPAR_CORE/Makefile.in EMBOSS-6.3.1/emboss/data/JASPAR_CORE/Makefile.in
+--- EMBOSS-6.3.1.orig/emboss/data/JASPAR_CORE/Makefile.in 2010-07-19 07:55:41.000000000 -0400
++++ EMBOSS-6.3.1/emboss/data/JASPAR_CORE/Makefile.in 2010-08-02 17:23:25.283143010 -0400
+@@ -39,9 +39,9 @@
+ am__aclocal_m4_deps = $(top_srcdir)/m4/amd64.m4 \
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+- $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pngdriver.m4 \
+- $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+- $(top_srcdir)/configure.in
++ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
++ $(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/postgresql.m4 \
++ $(top_srcdir)/m4/sgi.m4 $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+ $(ACLOCAL_M4)
+ mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
+@@ -151,6 +151,8 @@
+ PCRE_POSIXLIB_VERSION = @PCRE_POSIXLIB_VERSION@
+ PCRE_VERSION = @PCRE_VERSION@
+ PG_CONFIG = @PG_CONFIG@
++PLPLOT_CFLAGS = @PLPLOT_CFLAGS@
++PLPLOT_LIBS = @PLPLOT_LIBS@
+ POSIX_MALLOC_THRESHOLD = @POSIX_MALLOC_THRESHOLD@
+ POSTGRESQL_CFLAGS = @POSTGRESQL_CFLAGS@
+ POSTGRESQL_LDFLAGS = @POSTGRESQL_LDFLAGS@
+@@ -237,9 +239,9 @@
+ exit 1;; \
+ esac; \
+ done; \
+- echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu emboss/data/JASPAR_CORE/Makefile'; \
++ echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnits emboss/data/JASPAR_CORE/Makefile'; \
+ $(am__cd) $(top_srcdir) && \
+- $(AUTOMAKE) --gnu emboss/data/JASPAR_CORE/Makefile
++ $(AUTOMAKE) --gnits emboss/data/JASPAR_CORE/Makefile
+ .PRECIOUS: Makefile
+ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+ @case '$?' in \
+diff -urP EMBOSS-6.3.1.orig/emboss/data/JASPAR_FAM/Makefile.in EMBOSS-6.3.1/emboss/data/JASPAR_FAM/Makefile.in
+--- EMBOSS-6.3.1.orig/emboss/data/JASPAR_FAM/Makefile.in 2010-07-19 07:55:41.000000000 -0400
++++ EMBOSS-6.3.1/emboss/data/JASPAR_FAM/Makefile.in 2010-08-02 17:23:25.353143778 -0400
+@@ -39,9 +39,9 @@
+ am__aclocal_m4_deps = $(top_srcdir)/m4/amd64.m4 \
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+- $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pngdriver.m4 \
+- $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+- $(top_srcdir)/configure.in
++ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
++ $(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/postgresql.m4 \
++ $(top_srcdir)/m4/sgi.m4 $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+ $(ACLOCAL_M4)
+ mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
+@@ -151,6 +151,8 @@
+ PCRE_POSIXLIB_VERSION = @PCRE_POSIXLIB_VERSION@
+ PCRE_VERSION = @PCRE_VERSION@
+ PG_CONFIG = @PG_CONFIG@
++PLPLOT_CFLAGS = @PLPLOT_CFLAGS@
++PLPLOT_LIBS = @PLPLOT_LIBS@
+ POSIX_MALLOC_THRESHOLD = @POSIX_MALLOC_THRESHOLD@
+ POSTGRESQL_CFLAGS = @POSTGRESQL_CFLAGS@
+ POSTGRESQL_LDFLAGS = @POSTGRESQL_LDFLAGS@
+@@ -237,9 +239,9 @@
+ exit 1;; \
+ esac; \
+ done; \
+- echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu emboss/data/JASPAR_FAM/Makefile'; \
++ echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnits emboss/data/JASPAR_FAM/Makefile'; \
+ $(am__cd) $(top_srcdir) && \
+- $(AUTOMAKE) --gnu emboss/data/JASPAR_FAM/Makefile
++ $(AUTOMAKE) --gnits emboss/data/JASPAR_FAM/Makefile
+ .PRECIOUS: Makefile
+ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+ @case '$?' in \
+diff -urP EMBOSS-6.3.1.orig/emboss/data/JASPAR_PBM/Makefile.in EMBOSS-6.3.1/emboss/data/JASPAR_PBM/Makefile.in
+--- EMBOSS-6.3.1.orig/emboss/data/JASPAR_PBM/Makefile.in 2010-07-19 07:55:41.000000000 -0400
++++ EMBOSS-6.3.1/emboss/data/JASPAR_PBM/Makefile.in 2010-08-02 17:23:25.422143149 -0400
+@@ -39,9 +39,9 @@
+ am__aclocal_m4_deps = $(top_srcdir)/m4/amd64.m4 \
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+- $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pngdriver.m4 \
+- $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+- $(top_srcdir)/configure.in
++ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
++ $(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/postgresql.m4 \
++ $(top_srcdir)/m4/sgi.m4 $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+ $(ACLOCAL_M4)
+ mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
+@@ -151,6 +151,8 @@
+ PCRE_POSIXLIB_VERSION = @PCRE_POSIXLIB_VERSION@
+ PCRE_VERSION = @PCRE_VERSION@
+ PG_CONFIG = @PG_CONFIG@
++PLPLOT_CFLAGS = @PLPLOT_CFLAGS@
++PLPLOT_LIBS = @PLPLOT_LIBS@
+ POSIX_MALLOC_THRESHOLD = @POSIX_MALLOC_THRESHOLD@
+ POSTGRESQL_CFLAGS = @POSTGRESQL_CFLAGS@
+ POSTGRESQL_LDFLAGS = @POSTGRESQL_LDFLAGS@
+@@ -237,9 +239,9 @@
+ exit 1;; \
+ esac; \
+ done; \
+- echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu emboss/data/JASPAR_PBM/Makefile'; \
++ echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnits emboss/data/JASPAR_PBM/Makefile'; \
+ $(am__cd) $(top_srcdir) && \
+- $(AUTOMAKE) --gnu emboss/data/JASPAR_PBM/Makefile
++ $(AUTOMAKE) --gnits emboss/data/JASPAR_PBM/Makefile
+ .PRECIOUS: Makefile
+ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+ @case '$?' in \
+diff -urP EMBOSS-6.3.1.orig/emboss/data/JASPAR_PBM_HLH/Makefile.in EMBOSS-6.3.1/emboss/data/JASPAR_PBM_HLH/Makefile.in
+--- EMBOSS-6.3.1.orig/emboss/data/JASPAR_PBM_HLH/Makefile.in 2010-07-19 07:55:41.000000000 -0400
++++ EMBOSS-6.3.1/emboss/data/JASPAR_PBM_HLH/Makefile.in 2010-08-02 17:23:25.492142870 -0400
+@@ -39,9 +39,9 @@
+ am__aclocal_m4_deps = $(top_srcdir)/m4/amd64.m4 \
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+- $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pngdriver.m4 \
+- $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+- $(top_srcdir)/configure.in
++ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
++ $(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/postgresql.m4 \
++ $(top_srcdir)/m4/sgi.m4 $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+ $(ACLOCAL_M4)
+ mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
+@@ -151,6 +151,8 @@
+ PCRE_POSIXLIB_VERSION = @PCRE_POSIXLIB_VERSION@
+ PCRE_VERSION = @PCRE_VERSION@
+ PG_CONFIG = @PG_CONFIG@
++PLPLOT_CFLAGS = @PLPLOT_CFLAGS@
++PLPLOT_LIBS = @PLPLOT_LIBS@
+ POSIX_MALLOC_THRESHOLD = @POSIX_MALLOC_THRESHOLD@
+ POSTGRESQL_CFLAGS = @POSTGRESQL_CFLAGS@
+ POSTGRESQL_LDFLAGS = @POSTGRESQL_LDFLAGS@
+@@ -237,9 +239,9 @@
+ exit 1;; \
+ esac; \
+ done; \
+- echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu emboss/data/JASPAR_PBM_HLH/Makefile'; \
++ echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnits emboss/data/JASPAR_PBM_HLH/Makefile'; \
+ $(am__cd) $(top_srcdir) && \
+- $(AUTOMAKE) --gnu emboss/data/JASPAR_PBM_HLH/Makefile
++ $(AUTOMAKE) --gnits emboss/data/JASPAR_PBM_HLH/Makefile
+ .PRECIOUS: Makefile
+ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+ @case '$?' in \
+diff -urP EMBOSS-6.3.1.orig/emboss/data/JASPAR_PBM_HOMEO/Makefile.in EMBOSS-6.3.1/emboss/data/JASPAR_PBM_HOMEO/Makefile.in
+--- EMBOSS-6.3.1.orig/emboss/data/JASPAR_PBM_HOMEO/Makefile.in 2010-07-19 07:55:41.000000000 -0400
++++ EMBOSS-6.3.1/emboss/data/JASPAR_PBM_HOMEO/Makefile.in 2010-08-02 17:23:25.561143149 -0400
+@@ -39,9 +39,9 @@
+ am__aclocal_m4_deps = $(top_srcdir)/m4/amd64.m4 \
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+- $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pngdriver.m4 \
+- $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+- $(top_srcdir)/configure.in
++ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
++ $(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/postgresql.m4 \
++ $(top_srcdir)/m4/sgi.m4 $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+ $(ACLOCAL_M4)
+ mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
+@@ -151,6 +151,8 @@
+ PCRE_POSIXLIB_VERSION = @PCRE_POSIXLIB_VERSION@
+ PCRE_VERSION = @PCRE_VERSION@
+ PG_CONFIG = @PG_CONFIG@
++PLPLOT_CFLAGS = @PLPLOT_CFLAGS@
++PLPLOT_LIBS = @PLPLOT_LIBS@
+ POSIX_MALLOC_THRESHOLD = @POSIX_MALLOC_THRESHOLD@
+ POSTGRESQL_CFLAGS = @POSTGRESQL_CFLAGS@
+ POSTGRESQL_LDFLAGS = @POSTGRESQL_LDFLAGS@
+@@ -237,9 +239,9 @@
+ exit 1;; \
+ esac; \
+ done; \
+- echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu emboss/data/JASPAR_PBM_HOMEO/Makefile'; \
++ echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnits emboss/data/JASPAR_PBM_HOMEO/Makefile'; \
+ $(am__cd) $(top_srcdir) && \
+- $(AUTOMAKE) --gnu emboss/data/JASPAR_PBM_HOMEO/Makefile
++ $(AUTOMAKE) --gnits emboss/data/JASPAR_PBM_HOMEO/Makefile
+ .PRECIOUS: Makefile
+ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+ @case '$?' in \
+diff -urP EMBOSS-6.3.1.orig/emboss/data/JASPAR_PHYLOFACTS/Makefile.in EMBOSS-6.3.1/emboss/data/JASPAR_PHYLOFACTS/Makefile.in
+--- EMBOSS-6.3.1.orig/emboss/data/JASPAR_PHYLOFACTS/Makefile.in 2010-07-19 07:55:41.000000000 -0400
++++ EMBOSS-6.3.1/emboss/data/JASPAR_PHYLOFACTS/Makefile.in 2010-08-02 17:23:25.630143079 -0400
+@@ -39,9 +39,9 @@
+ am__aclocal_m4_deps = $(top_srcdir)/m4/amd64.m4 \
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+- $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pngdriver.m4 \
+- $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+- $(top_srcdir)/configure.in
++ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
++ $(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/postgresql.m4 \
++ $(top_srcdir)/m4/sgi.m4 $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+ $(ACLOCAL_M4)
+ mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
+@@ -151,6 +151,8 @@
+ PCRE_POSIXLIB_VERSION = @PCRE_POSIXLIB_VERSION@
+ PCRE_VERSION = @PCRE_VERSION@
+ PG_CONFIG = @PG_CONFIG@
++PLPLOT_CFLAGS = @PLPLOT_CFLAGS@
++PLPLOT_LIBS = @PLPLOT_LIBS@
+ POSIX_MALLOC_THRESHOLD = @POSIX_MALLOC_THRESHOLD@
+ POSTGRESQL_CFLAGS = @POSTGRESQL_CFLAGS@
+ POSTGRESQL_LDFLAGS = @POSTGRESQL_LDFLAGS@
+@@ -237,9 +239,9 @@
+ exit 1;; \
+ esac; \
+ done; \
+- echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu emboss/data/JASPAR_PHYLOFACTS/Makefile'; \
++ echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnits emboss/data/JASPAR_PHYLOFACTS/Makefile'; \
+ $(am__cd) $(top_srcdir) && \
+- $(AUTOMAKE) --gnu emboss/data/JASPAR_PHYLOFACTS/Makefile
++ $(AUTOMAKE) --gnits emboss/data/JASPAR_PHYLOFACTS/Makefile
+ .PRECIOUS: Makefile
+ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+ @case '$?' in \
+diff -urP EMBOSS-6.3.1.orig/emboss/data/JASPAR_POLII/Makefile.in EMBOSS-6.3.1/emboss/data/JASPAR_POLII/Makefile.in
+--- EMBOSS-6.3.1.orig/emboss/data/JASPAR_POLII/Makefile.in 2010-07-19 07:55:41.000000000 -0400
++++ EMBOSS-6.3.1/emboss/data/JASPAR_POLII/Makefile.in 2010-08-02 17:23:25.704143778 -0400
+@@ -39,9 +39,9 @@
+ am__aclocal_m4_deps = $(top_srcdir)/m4/amd64.m4 \
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+- $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pngdriver.m4 \
+- $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+- $(top_srcdir)/configure.in
++ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
++ $(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/postgresql.m4 \
++ $(top_srcdir)/m4/sgi.m4 $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+ $(ACLOCAL_M4)
+ mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
+@@ -151,6 +151,8 @@
+ PCRE_POSIXLIB_VERSION = @PCRE_POSIXLIB_VERSION@
+ PCRE_VERSION = @PCRE_VERSION@
+ PG_CONFIG = @PG_CONFIG@
++PLPLOT_CFLAGS = @PLPLOT_CFLAGS@
++PLPLOT_LIBS = @PLPLOT_LIBS@
+ POSIX_MALLOC_THRESHOLD = @POSIX_MALLOC_THRESHOLD@
+ POSTGRESQL_CFLAGS = @POSTGRESQL_CFLAGS@
+ POSTGRESQL_LDFLAGS = @POSTGRESQL_LDFLAGS@
+@@ -237,9 +239,9 @@
+ exit 1;; \
+ esac; \
+ done; \
+- echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu emboss/data/JASPAR_POLII/Makefile'; \
++ echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnits emboss/data/JASPAR_POLII/Makefile'; \
+ $(am__cd) $(top_srcdir) && \
+- $(AUTOMAKE) --gnu emboss/data/JASPAR_POLII/Makefile
++ $(AUTOMAKE) --gnits emboss/data/JASPAR_POLII/Makefile
+ .PRECIOUS: Makefile
+ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+ @case '$?' in \
+diff -urP EMBOSS-6.3.1.orig/emboss/data/JASPAR_SPLICE/Makefile.in EMBOSS-6.3.1/emboss/data/JASPAR_SPLICE/Makefile.in
+--- EMBOSS-6.3.1.orig/emboss/data/JASPAR_SPLICE/Makefile.in 2010-07-19 07:55:41.000000000 -0400
++++ EMBOSS-6.3.1/emboss/data/JASPAR_SPLICE/Makefile.in 2010-08-02 17:23:25.777143568 -0400
+@@ -39,9 +39,9 @@
+ am__aclocal_m4_deps = $(top_srcdir)/m4/amd64.m4 \
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+- $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pngdriver.m4 \
+- $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+- $(top_srcdir)/configure.in
++ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
++ $(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/postgresql.m4 \
++ $(top_srcdir)/m4/sgi.m4 $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+ $(ACLOCAL_M4)
+ mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
+@@ -151,6 +151,8 @@
+ PCRE_POSIXLIB_VERSION = @PCRE_POSIXLIB_VERSION@
+ PCRE_VERSION = @PCRE_VERSION@
+ PG_CONFIG = @PG_CONFIG@
++PLPLOT_CFLAGS = @PLPLOT_CFLAGS@
++PLPLOT_LIBS = @PLPLOT_LIBS@
+ POSIX_MALLOC_THRESHOLD = @POSIX_MALLOC_THRESHOLD@
+ POSTGRESQL_CFLAGS = @POSTGRESQL_CFLAGS@
+ POSTGRESQL_LDFLAGS = @POSTGRESQL_LDFLAGS@
+@@ -237,9 +239,9 @@
+ exit 1;; \
+ esac; \
+ done; \
+- echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu emboss/data/JASPAR_SPLICE/Makefile'; \
++ echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnits emboss/data/JASPAR_SPLICE/Makefile'; \
+ $(am__cd) $(top_srcdir) && \
+- $(AUTOMAKE) --gnu emboss/data/JASPAR_SPLICE/Makefile
++ $(AUTOMAKE) --gnits emboss/data/JASPAR_SPLICE/Makefile
+ .PRECIOUS: Makefile
+ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+ @case '$?' in \
+diff -urP EMBOSS-6.3.1.orig/emboss/data/Makefile.in EMBOSS-6.3.1/emboss/data/Makefile.in
+--- EMBOSS-6.3.1.orig/emboss/data/Makefile.in 2010-07-19 07:55:41.000000000 -0400
++++ EMBOSS-6.3.1/emboss/data/Makefile.in 2010-08-02 17:23:25.863143219 -0400
+@@ -39,9 +39,9 @@
+ am__aclocal_m4_deps = $(top_srcdir)/m4/amd64.m4 \
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+- $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pngdriver.m4 \
+- $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+- $(top_srcdir)/configure.in
++ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
++ $(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/postgresql.m4 \
++ $(top_srcdir)/m4/sgi.m4 $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+ $(ACLOCAL_M4)
+ mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
+@@ -191,6 +191,8 @@
+ PCRE_POSIXLIB_VERSION = @PCRE_POSIXLIB_VERSION@
+ PCRE_VERSION = @PCRE_VERSION@
+ PG_CONFIG = @PG_CONFIG@
++PLPLOT_CFLAGS = @PLPLOT_CFLAGS@
++PLPLOT_LIBS = @PLPLOT_LIBS@
+ POSIX_MALLOC_THRESHOLD = @POSIX_MALLOC_THRESHOLD@
+ POSTGRESQL_CFLAGS = @POSTGRESQL_CFLAGS@
+ POSTGRESQL_LDFLAGS = @POSTGRESQL_LDFLAGS@
+@@ -318,9 +320,9 @@
+ exit 1;; \
+ esac; \
+ done; \
+- echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu emboss/data/Makefile'; \
++ echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnits emboss/data/Makefile'; \
+ $(am__cd) $(top_srcdir) && \
+- $(AUTOMAKE) --gnu emboss/data/Makefile
++ $(AUTOMAKE) --gnits emboss/data/Makefile
+ .PRECIOUS: Makefile
+ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+ @case '$?' in \
+diff -urP EMBOSS-6.3.1.orig/emboss/data/PRINTS/Makefile.in EMBOSS-6.3.1/emboss/data/PRINTS/Makefile.in
+--- EMBOSS-6.3.1.orig/emboss/data/PRINTS/Makefile.in 2010-07-19 07:55:41.000000000 -0400
++++ EMBOSS-6.3.1/emboss/data/PRINTS/Makefile.in 2010-08-02 17:23:25.935143359 -0400
+@@ -39,9 +39,9 @@
+ am__aclocal_m4_deps = $(top_srcdir)/m4/amd64.m4 \
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+- $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pngdriver.m4 \
+- $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+- $(top_srcdir)/configure.in
++ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
++ $(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/postgresql.m4 \
++ $(top_srcdir)/m4/sgi.m4 $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+ $(ACLOCAL_M4)
+ mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
+@@ -151,6 +151,8 @@
+ PCRE_POSIXLIB_VERSION = @PCRE_POSIXLIB_VERSION@
+ PCRE_VERSION = @PCRE_VERSION@
+ PG_CONFIG = @PG_CONFIG@
++PLPLOT_CFLAGS = @PLPLOT_CFLAGS@
++PLPLOT_LIBS = @PLPLOT_LIBS@
+ POSIX_MALLOC_THRESHOLD = @POSIX_MALLOC_THRESHOLD@
+ POSTGRESQL_CFLAGS = @POSTGRESQL_CFLAGS@
+ POSTGRESQL_LDFLAGS = @POSTGRESQL_LDFLAGS@
+@@ -237,9 +239,9 @@
+ exit 1;; \
+ esac; \
+ done; \
+- echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu emboss/data/PRINTS/Makefile'; \
++ echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnits emboss/data/PRINTS/Makefile'; \
+ $(am__cd) $(top_srcdir) && \
+- $(AUTOMAKE) --gnu emboss/data/PRINTS/Makefile
++ $(AUTOMAKE) --gnits emboss/data/PRINTS/Makefile
+ .PRECIOUS: Makefile
+ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+ @case '$?' in \
+diff -urP EMBOSS-6.3.1.orig/emboss/data/PROSITE/Makefile.in EMBOSS-6.3.1/emboss/data/PROSITE/Makefile.in
+--- EMBOSS-6.3.1.orig/emboss/data/PROSITE/Makefile.in 2010-07-19 07:55:41.000000000 -0400
++++ EMBOSS-6.3.1/emboss/data/PROSITE/Makefile.in 2010-08-02 17:23:26.007143918 -0400
+@@ -39,9 +39,9 @@
+ am__aclocal_m4_deps = $(top_srcdir)/m4/amd64.m4 \
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+- $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pngdriver.m4 \
+- $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+- $(top_srcdir)/configure.in
++ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
++ $(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/postgresql.m4 \
++ $(top_srcdir)/m4/sgi.m4 $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+ $(ACLOCAL_M4)
+ mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
+@@ -151,6 +151,8 @@
+ PCRE_POSIXLIB_VERSION = @PCRE_POSIXLIB_VERSION@
+ PCRE_VERSION = @PCRE_VERSION@
+ PG_CONFIG = @PG_CONFIG@
++PLPLOT_CFLAGS = @PLPLOT_CFLAGS@
++PLPLOT_LIBS = @PLPLOT_LIBS@
+ POSIX_MALLOC_THRESHOLD = @POSIX_MALLOC_THRESHOLD@
+ POSTGRESQL_CFLAGS = @POSTGRESQL_CFLAGS@
+ POSTGRESQL_LDFLAGS = @POSTGRESQL_LDFLAGS@
+@@ -237,9 +239,9 @@
+ exit 1;; \
+ esac; \
+ done; \
+- echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu emboss/data/PROSITE/Makefile'; \
++ echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnits emboss/data/PROSITE/Makefile'; \
+ $(am__cd) $(top_srcdir) && \
+- $(AUTOMAKE) --gnu emboss/data/PROSITE/Makefile
++ $(AUTOMAKE) --gnits emboss/data/PROSITE/Makefile
+ .PRECIOUS: Makefile
+ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+ @case '$?' in \
+diff -urP EMBOSS-6.3.1.orig/emboss/data/REBASE/Makefile.in EMBOSS-6.3.1/emboss/data/REBASE/Makefile.in
+--- EMBOSS-6.3.1.orig/emboss/data/REBASE/Makefile.in 2010-07-19 07:55:42.000000000 -0400
++++ EMBOSS-6.3.1/emboss/data/REBASE/Makefile.in 2010-08-02 17:23:26.080143359 -0400
+@@ -39,9 +39,9 @@
+ am__aclocal_m4_deps = $(top_srcdir)/m4/amd64.m4 \
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+- $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pngdriver.m4 \
+- $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+- $(top_srcdir)/configure.in
++ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
++ $(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/postgresql.m4 \
++ $(top_srcdir)/m4/sgi.m4 $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+ $(ACLOCAL_M4)
+ mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
+@@ -151,6 +151,8 @@
+ PCRE_POSIXLIB_VERSION = @PCRE_POSIXLIB_VERSION@
+ PCRE_VERSION = @PCRE_VERSION@
+ PG_CONFIG = @PG_CONFIG@
++PLPLOT_CFLAGS = @PLPLOT_CFLAGS@
++PLPLOT_LIBS = @PLPLOT_LIBS@
+ POSIX_MALLOC_THRESHOLD = @POSIX_MALLOC_THRESHOLD@
+ POSTGRESQL_CFLAGS = @POSTGRESQL_CFLAGS@
+ POSTGRESQL_LDFLAGS = @POSTGRESQL_LDFLAGS@
+@@ -237,9 +239,9 @@
+ exit 1;; \
+ esac; \
+ done; \
+- echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu emboss/data/REBASE/Makefile'; \
++ echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnits emboss/data/REBASE/Makefile'; \
+ $(am__cd) $(top_srcdir) && \
+- $(AUTOMAKE) --gnu emboss/data/REBASE/Makefile
++ $(AUTOMAKE) --gnits emboss/data/REBASE/Makefile
+ .PRECIOUS: Makefile
+ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+ @case '$?' in \
+diff -urP EMBOSS-6.3.1.orig/emboss/Makefile.in EMBOSS-6.3.1/emboss/Makefile.in
+--- EMBOSS-6.3.1.orig/emboss/Makefile.in 2010-08-02 17:23:03.949267957 -0400
++++ EMBOSS-6.3.1/emboss/Makefile.in 2010-08-02 17:23:24.902143429 -0400
+@@ -120,9 +120,8 @@
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
+- $(top_srcdir)/m4/pngdriver.m4 \
+- $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+- $(top_srcdir)/configure.in
++ $(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/postgresql.m4 \
++ $(top_srcdir)/m4/sgi.m4 $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+ $(ACLOCAL_M4)
+ mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
+@@ -137,7 +136,7 @@
+ aaindexextract_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_abiview_OBJECTS = abiview.$(OBJEXT)
+ abiview_OBJECTS = $(am_abiview_OBJECTS)
+@@ -145,23 +144,21 @@
+ abiview_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_acdc_OBJECTS = acdc.$(OBJEXT)
+ acdc_OBJECTS = $(am_acdc_OBJECTS)
+ acdc_LDADD = $(LDADD)
+ acdc_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_acdgalaxy_OBJECTS = acdgalaxy.$(OBJEXT)
+ acdgalaxy_OBJECTS = $(am_acdgalaxy_OBJECTS)
+ acdgalaxy_LDADD = $(LDADD)
+ acdgalaxy_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_acdlog_OBJECTS = acdlog.$(OBJEXT)
+ acdlog_OBJECTS = $(am_acdlog_OBJECTS)
+@@ -169,15 +166,14 @@
+ acdlog_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_acdpretty_OBJECTS = acdpretty.$(OBJEXT)
+ acdpretty_OBJECTS = $(am_acdpretty_OBJECTS)
+ acdpretty_LDADD = $(LDADD)
+ acdpretty_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_acdrelations_OBJECTS = acdrelations.$(OBJEXT)
+ acdrelations_OBJECTS = $(am_acdrelations_OBJECTS)
+@@ -185,7 +181,7 @@
+ acdrelations_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_acdtable_OBJECTS = acdtable.$(OBJEXT)
+ acdtable_OBJECTS = $(am_acdtable_OBJECTS)
+@@ -193,47 +189,42 @@
+ acdtable_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_acdtrace_OBJECTS = acdtrace.$(OBJEXT)
+ acdtrace_OBJECTS = $(am_acdtrace_OBJECTS)
+ acdtrace_LDADD = $(LDADD)
+ acdtrace_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_acdvalid_OBJECTS = acdvalid.$(OBJEXT)
+ acdvalid_OBJECTS = $(am_acdvalid_OBJECTS)
+ acdvalid_LDADD = $(LDADD)
+ acdvalid_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_acdxsd_OBJECTS = acdxsd.$(OBJEXT)
+ acdxsd_OBJECTS = $(am_acdxsd_OBJECTS)
+ acdxsd_LDADD = $(LDADD)
+ acdxsd_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_ajtest_OBJECTS = ajtest.$(OBJEXT)
+ ajtest_OBJECTS = $(am_ajtest_OBJECTS)
+ ajtest_LDADD = $(LDADD)
+ ajtest_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_aligncopy_OBJECTS = aligncopy.$(OBJEXT)
+ aligncopy_OBJECTS = $(am_aligncopy_OBJECTS)
+ aligncopy_LDADD = $(LDADD)
+ aligncopy_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_aligncopypair_OBJECTS = aligncopypair.$(OBJEXT)
+ aligncopypair_OBJECTS = $(am_aligncopypair_OBJECTS)
+@@ -241,7 +232,7 @@
+ aligncopypair_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_antigenic_OBJECTS = antigenic.$(OBJEXT)
+ antigenic_OBJECTS = $(am_antigenic_OBJECTS)
+@@ -249,7 +240,7 @@
+ antigenic_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_backtranambig_OBJECTS = backtranambig.$(OBJEXT)
+ backtranambig_OBJECTS = $(am_backtranambig_OBJECTS)
+@@ -257,7 +248,7 @@
+ backtranambig_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_backtranseq_OBJECTS = backtranseq.$(OBJEXT)
+ backtranseq_OBJECTS = $(am_backtranseq_OBJECTS)
+@@ -265,7 +256,7 @@
+ backtranseq_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_banana_OBJECTS = banana.$(OBJEXT)
+ banana_OBJECTS = $(am_banana_OBJECTS)
+@@ -273,55 +264,49 @@
+ banana_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_biosed_OBJECTS = biosed.$(OBJEXT)
+ biosed_OBJECTS = $(am_biosed_OBJECTS)
+ biosed_LDADD = $(LDADD)
+ biosed_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_btwisted_OBJECTS = btwisted.$(OBJEXT)
+ btwisted_OBJECTS = $(am_btwisted_OBJECTS)
+ btwisted_LDADD = $(LDADD)
+ btwisted_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_cai_OBJECTS = cai.$(OBJEXT)
+ cai_OBJECTS = $(am_cai_OBJECTS)
+ cai_LDADD = $(LDADD)
+ cai_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_chaos_OBJECTS = chaos.$(OBJEXT)
+ chaos_OBJECTS = $(am_chaos_OBJECTS)
+ chaos_LDADD = $(LDADD)
+ chaos_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_charge_OBJECTS = charge.$(OBJEXT)
+ charge_OBJECTS = $(am_charge_OBJECTS)
+ charge_LDADD = $(LDADD)
+ charge_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_checktrans_OBJECTS = checktrans.$(OBJEXT)
+ checktrans_OBJECTS = $(am_checktrans_OBJECTS)
+ checktrans_LDADD = $(LDADD)
+ checktrans_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_chips_OBJECTS = chips.$(OBJEXT)
+ chips_OBJECTS = $(am_chips_OBJECTS)
+@@ -329,71 +314,63 @@
+ chips_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_cirdna_OBJECTS = cirdna.$(OBJEXT)
+ cirdna_OBJECTS = $(am_cirdna_OBJECTS)
+ cirdna_LDADD = $(LDADD)
+ cirdna_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_codcmp_OBJECTS = codcmp.$(OBJEXT)
+ codcmp_OBJECTS = $(am_codcmp_OBJECTS)
+ codcmp_LDADD = $(LDADD)
+ codcmp_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ codcopy_SOURCES = codcopy.c
+ codcopy_OBJECTS = codcopy.$(OBJEXT)
+ codcopy_LDADD = $(LDADD)
+ codcopy_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_coderet_OBJECTS = coderet.$(OBJEXT)
+ coderet_OBJECTS = $(am_coderet_OBJECTS)
+ coderet_LDADD = $(LDADD)
+ coderet_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_complex_OBJECTS = complex.$(OBJEXT)
+ complex_OBJECTS = $(am_complex_OBJECTS)
+ complex_LDADD = $(LDADD)
+ complex_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_compseq_OBJECTS = compseq.$(OBJEXT)
+ compseq_OBJECTS = $(am_compseq_OBJECTS)
+ compseq_LDADD = $(LDADD)
+ compseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_cons_OBJECTS = cons.$(OBJEXT)
+ cons_OBJECTS = $(am_cons_OBJECTS)
+ cons_LDADD = $(LDADD)
+ cons_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_consambig_OBJECTS = consambig.$(OBJEXT)
+ consambig_OBJECTS = $(am_consambig_OBJECTS)
+ consambig_LDADD = $(LDADD)
+ consambig_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_corbatest_OBJECTS = corbatest.$(OBJEXT)
+ corbatest_OBJECTS = $(am_corbatest_OBJECTS)
+@@ -401,7 +378,7 @@
+ corbatest_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_cpgplot_OBJECTS = cpgplot.$(OBJEXT)
+ cpgplot_OBJECTS = $(am_cpgplot_OBJECTS)
+@@ -409,15 +386,14 @@
+ cpgplot_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_cpgreport_OBJECTS = cpgreport.$(OBJEXT)
+ cpgreport_OBJECTS = $(am_cpgreport_OBJECTS)
+ cpgreport_LDADD = $(LDADD)
+ cpgreport_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_cusp_OBJECTS = cusp.$(OBJEXT)
+ cusp_OBJECTS = $(am_cusp_OBJECTS)
+@@ -425,15 +401,14 @@
+ cusp_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_cutgextract_OBJECTS = cutgextract.$(OBJEXT)
+ cutgextract_OBJECTS = $(am_cutgextract_OBJECTS)
+ cutgextract_LDADD = $(LDADD)
+ cutgextract_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_cutseq_OBJECTS = cutseq.$(OBJEXT)
+ cutseq_OBJECTS = $(am_cutseq_OBJECTS)
+@@ -441,159 +416,140 @@
+ cutseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_dan_OBJECTS = dan.$(OBJEXT)
+ dan_OBJECTS = $(am_dan_OBJECTS)
+ dan_LDADD = $(LDADD)
+ dan_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_dbiblast_OBJECTS = dbiblast.$(OBJEXT)
+ dbiblast_OBJECTS = $(am_dbiblast_OBJECTS)
+ dbiblast_LDADD = $(LDADD)
+ dbiblast_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_dbifasta_OBJECTS = dbifasta.$(OBJEXT)
+ dbifasta_OBJECTS = $(am_dbifasta_OBJECTS)
+ dbifasta_LDADD = $(LDADD)
+ dbifasta_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_dbiflat_OBJECTS = dbiflat.$(OBJEXT)
+ dbiflat_OBJECTS = $(am_dbiflat_OBJECTS)
+ dbiflat_LDADD = $(LDADD)
+ dbiflat_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_dbigcg_OBJECTS = dbigcg.$(OBJEXT)
+ dbigcg_OBJECTS = $(am_dbigcg_OBJECTS)
+ dbigcg_LDADD = $(LDADD)
+ dbigcg_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_dbxfasta_OBJECTS = dbxfasta.$(OBJEXT)
+ dbxfasta_OBJECTS = $(am_dbxfasta_OBJECTS)
+ dbxfasta_LDADD = $(LDADD)
+ dbxfasta_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_dbxflat_OBJECTS = dbxflat.$(OBJEXT)
+ dbxflat_OBJECTS = $(am_dbxflat_OBJECTS)
+ dbxflat_LDADD = $(LDADD)
+ dbxflat_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_dbxgcg_OBJECTS = dbxgcg.$(OBJEXT)
+ dbxgcg_OBJECTS = $(am_dbxgcg_OBJECTS)
+ dbxgcg_LDADD = $(LDADD)
+ dbxgcg_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_degapseq_OBJECTS = degapseq.$(OBJEXT)
+ degapseq_OBJECTS = $(am_degapseq_OBJECTS)
+ degapseq_LDADD = $(LDADD)
+ degapseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_density_OBJECTS = density.$(OBJEXT)
+ density_OBJECTS = $(am_density_OBJECTS)
+ density_LDADD = $(LDADD)
+ density_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_descseq_OBJECTS = descseq.$(OBJEXT)
+ descseq_OBJECTS = $(am_descseq_OBJECTS)
+ descseq_LDADD = $(LDADD)
+ descseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_diffseq_OBJECTS = diffseq.$(OBJEXT)
+ diffseq_OBJECTS = $(am_diffseq_OBJECTS)
+ diffseq_LDADD = $(LDADD)
+ diffseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_digest_OBJECTS = digest.$(OBJEXT)
+ digest_OBJECTS = $(am_digest_OBJECTS)
+ digest_LDADD = $(LDADD)
+ digest_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_distmat_OBJECTS = distmat.$(OBJEXT)
+ distmat_OBJECTS = $(am_distmat_OBJECTS)
+ distmat_LDADD = $(LDADD)
+ distmat_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ domtesta_SOURCES = domtesta.c
+ domtesta_OBJECTS = domtesta.$(OBJEXT)
+ domtesta_LDADD = $(LDADD)
+ domtesta_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ domtestb_SOURCES = domtestb.c
+ domtestb_OBJECTS = domtestb.$(OBJEXT)
+ domtestb_LDADD = $(LDADD)
+ domtestb_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ domtestc_SOURCES = domtestc.c
+ domtestc_OBJECTS = domtestc.$(OBJEXT)
+ domtestc_LDADD = $(LDADD)
+ domtestc_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ domtestd_SOURCES = domtestd.c
+ domtestd_OBJECTS = domtestd.$(OBJEXT)
+ domtestd_LDADD = $(LDADD)
+ domtestd_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_dotmatcher_OBJECTS = dotmatcher.$(OBJEXT)
+ dotmatcher_OBJECTS = $(am_dotmatcher_OBJECTS)
+ dotmatcher_LDADD = $(LDADD)
+ dotmatcher_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_dotpath_OBJECTS = dotpath.$(OBJEXT)
+ dotpath_OBJECTS = $(am_dotpath_OBJECTS)
+@@ -601,31 +557,28 @@
+ dotpath_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_dottup_OBJECTS = dottup.$(OBJEXT)
+ dottup_OBJECTS = $(am_dottup_OBJECTS)
+ dottup_LDADD = $(LDADD)
+ dottup_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_dreg_OBJECTS = dreg.$(OBJEXT)
+ dreg_OBJECTS = $(am_dreg_OBJECTS)
+ dreg_LDADD = $(LDADD)
+ dreg_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_edamclean_OBJECTS = edamclean.$(OBJEXT)
+ edamclean_OBJECTS = $(am_edamclean_OBJECTS)
+ edamclean_LDADD = $(LDADD)
+ edamclean_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_edialign_OBJECTS = edialign.$(OBJEXT)
+ edialign_OBJECTS = $(am_edialign_OBJECTS)
+@@ -633,15 +586,14 @@
+ edialign_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_einverted_OBJECTS = einverted.$(OBJEXT)
+ einverted_OBJECTS = $(am_einverted_OBJECTS)
+ einverted_LDADD = $(LDADD)
+ einverted_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_embossdata_OBJECTS = embossdata.$(OBJEXT)
+ embossdata_OBJECTS = $(am_embossdata_OBJECTS)
+@@ -649,7 +601,7 @@
+ embossdata_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_embossversion_OBJECTS = embossversion.$(OBJEXT)
+ embossversion_OBJECTS = $(am_embossversion_OBJECTS)
+@@ -657,7 +609,7 @@
+ embossversion_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_emma_OBJECTS = emma.$(OBJEXT)
+ emma_OBJECTS = $(am_emma_OBJECTS)
+@@ -665,23 +617,21 @@
+ emma_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_emowse_OBJECTS = emowse.$(OBJEXT)
+ emowse_OBJECTS = $(am_emowse_OBJECTS)
+ emowse_LDADD = $(LDADD)
+ emowse_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_ensembltest_OBJECTS = ensembltest.$(OBJEXT)
+ ensembltest_OBJECTS = $(am_ensembltest_OBJECTS)
+ ensembltest_LDADD = $(LDADD)
+ ensembltest_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_entrails_OBJECTS = entrails.$(OBJEXT)
+ entrails_OBJECTS = $(am_entrails_OBJECTS)
+@@ -689,15 +639,14 @@
+ entrails_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_entrailsbook_OBJECTS = entrailsbook.$(OBJEXT)
+ entrailsbook_OBJECTS = $(am_entrailsbook_OBJECTS)
+ entrailsbook_LDADD = $(LDADD)
+ entrailsbook_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_entrailshtml_OBJECTS = entrailshtml.$(OBJEXT)
+ entrailshtml_OBJECTS = $(am_entrailshtml_OBJECTS)
+@@ -705,7 +654,7 @@
+ entrailshtml_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_entrailswiki_OBJECTS = entrailswiki.$(OBJEXT)
+ entrailswiki_OBJECTS = $(am_entrailswiki_OBJECTS)
+@@ -713,7 +662,7 @@
+ entrailswiki_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_entret_OBJECTS = entret.$(OBJEXT)
+ entret_OBJECTS = $(am_entret_OBJECTS)
+@@ -721,15 +670,14 @@
+ entret_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_epestfind_OBJECTS = epestfind.$(OBJEXT)
+ epestfind_OBJECTS = $(am_epestfind_OBJECTS)
+ epestfind_LDADD = $(LDADD)
+ epestfind_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_eprimer3_OBJECTS = eprimer3.$(OBJEXT)
+ eprimer3_OBJECTS = $(am_eprimer3_OBJECTS)
+@@ -737,15 +685,14 @@
+ eprimer3_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_equicktandem_OBJECTS = equicktandem.$(OBJEXT)
+ equicktandem_OBJECTS = $(am_equicktandem_OBJECTS)
+ equicktandem_LDADD = $(LDADD)
+ equicktandem_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_est2genome_OBJECTS = est2genome.$(OBJEXT)
+ est2genome_OBJECTS = $(am_est2genome_OBJECTS)
+@@ -753,7 +700,7 @@
+ est2genome_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_etandem_OBJECTS = etandem.$(OBJEXT)
+ etandem_OBJECTS = $(am_etandem_OBJECTS)
+@@ -761,15 +708,14 @@
+ etandem_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_extractalign_OBJECTS = extractalign.$(OBJEXT)
+ extractalign_OBJECTS = $(am_extractalign_OBJECTS)
+ extractalign_LDADD = $(LDADD)
+ extractalign_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_extractfeat_OBJECTS = extractfeat.$(OBJEXT)
+ extractfeat_OBJECTS = $(am_extractfeat_OBJECTS)
+@@ -777,7 +723,7 @@
+ extractfeat_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_extractseq_OBJECTS = extractseq.$(OBJEXT)
+ extractseq_OBJECTS = $(am_extractseq_OBJECTS)
+@@ -785,7 +731,7 @@
+ extractseq_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_featcopy_OBJECTS = featcopy.$(OBJEXT)
+ featcopy_OBJECTS = $(am_featcopy_OBJECTS)
+@@ -793,15 +739,14 @@
+ featcopy_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_featreport_OBJECTS = featreport.$(OBJEXT)
+ featreport_OBJECTS = $(am_featreport_OBJECTS)
+ featreport_LDADD = $(LDADD)
+ featreport_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_findkm_OBJECTS = findkm.$(OBJEXT)
+ findkm_OBJECTS = $(am_findkm_OBJECTS)
+@@ -809,71 +754,63 @@
+ findkm_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_freak_OBJECTS = freak.$(OBJEXT)
+ freak_OBJECTS = $(am_freak_OBJECTS)
+ freak_LDADD = $(LDADD)
+ freak_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_fuzznuc_OBJECTS = fuzznuc.$(OBJEXT)
+ fuzznuc_OBJECTS = $(am_fuzznuc_OBJECTS)
+ fuzznuc_LDADD = $(LDADD)
+ fuzznuc_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_fuzzpro_OBJECTS = fuzzpro.$(OBJEXT)
+ fuzzpro_OBJECTS = $(am_fuzzpro_OBJECTS)
+ fuzzpro_LDADD = $(LDADD)
+ fuzzpro_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_fuzztran_OBJECTS = fuzztran.$(OBJEXT)
+ fuzztran_OBJECTS = $(am_fuzztran_OBJECTS)
+ fuzztran_LDADD = $(LDADD)
+ fuzztran_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_garnier_OBJECTS = garnier.$(OBJEXT)
+ garnier_OBJECTS = $(am_garnier_OBJECTS)
+ garnier_LDADD = $(LDADD)
+ garnier_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_geecee_OBJECTS = geecee.$(OBJEXT)
+ geecee_OBJECTS = $(am_geecee_OBJECTS)
+ geecee_LDADD = $(LDADD)
+ geecee_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_getorf_OBJECTS = getorf.$(OBJEXT)
+ getorf_OBJECTS = $(am_getorf_OBJECTS)
+ getorf_LDADD = $(LDADD)
+ getorf_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_helixturnhelix_OBJECTS = helixturnhelix.$(OBJEXT)
+ helixturnhelix_OBJECTS = $(am_helixturnhelix_OBJECTS)
+ helixturnhelix_LDADD = $(LDADD)
+ helixturnhelix_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_histogramtest_OBJECTS = histogramtest.$(OBJEXT)
+ histogramtest_OBJECTS = $(am_histogramtest_OBJECTS)
+@@ -881,7 +818,7 @@
+ histogramtest_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_hmoment_OBJECTS = hmoment.$(OBJEXT)
+ hmoment_OBJECTS = $(am_hmoment_OBJECTS)
+@@ -889,23 +826,21 @@
+ hmoment_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_iep_OBJECTS = iep.$(OBJEXT)
+ iep_OBJECTS = $(am_iep_OBJECTS)
+ iep_LDADD = $(LDADD)
+ iep_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_infoalign_OBJECTS = infoalign.$(OBJEXT)
+ infoalign_OBJECTS = $(am_infoalign_OBJECTS)
+ infoalign_LDADD = $(LDADD)
+ infoalign_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_infobase_OBJECTS = infobase.$(OBJEXT)
+ infobase_OBJECTS = $(am_infobase_OBJECTS)
+@@ -913,15 +848,14 @@
+ infobase_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_inforesidue_OBJECTS = inforesidue.$(OBJEXT)
+ inforesidue_OBJECTS = $(am_inforesidue_OBJECTS)
+ inforesidue_LDADD = $(LDADD)
+ inforesidue_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_infoseq_OBJECTS = infoseq.$(OBJEXT)
+ infoseq_OBJECTS = $(am_infoseq_OBJECTS)
+@@ -929,31 +863,28 @@
+ infoseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_intconv_OBJECTS = intconv.$(OBJEXT)
+ intconv_OBJECTS = $(am_intconv_OBJECTS)
+ intconv_LDADD = $(LDADD)
+ intconv_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_isochore_OBJECTS = isochore.$(OBJEXT)
+ isochore_OBJECTS = $(am_isochore_OBJECTS)
+ isochore_LDADD = $(LDADD)
+ isochore_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_jaspextract_OBJECTS = jaspextract.$(OBJEXT)
+ jaspextract_OBJECTS = $(am_jaspextract_OBJECTS)
+ jaspextract_LDADD = $(LDADD)
+ jaspextract_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_jaspscan_OBJECTS = jaspscan.$(OBJEXT)
+ jaspscan_OBJECTS = $(am_jaspscan_OBJECTS)
+@@ -961,15 +892,14 @@
+ jaspscan_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_jembossctl_OBJECTS = jembossctl.$(OBJEXT)
+ jembossctl_OBJECTS = $(am_jembossctl_OBJECTS)
+ jembossctl_LDADD = $(LDADD)
+ jembossctl_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_lindna_OBJECTS = lindna.$(OBJEXT)
+ lindna_OBJECTS = $(am_lindna_OBJECTS)
+@@ -977,23 +907,21 @@
+ lindna_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_listor_OBJECTS = listor.$(OBJEXT)
+ listor_OBJECTS = $(am_listor_OBJECTS)
+ listor_LDADD = $(LDADD)
+ listor_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ makenucseq_SOURCES = makenucseq.c
+ makenucseq_OBJECTS = makenucseq.$(OBJEXT)
+ makenucseq_LDADD = $(LDADD)
+ makenucseq_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ makeprotseq_SOURCES = makeprotseq.c
+ makeprotseq_OBJECTS = makeprotseq.$(OBJEXT)
+@@ -1001,7 +929,7 @@
+ makeprotseq_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_marscan_OBJECTS = marscan.$(OBJEXT)
+ marscan_OBJECTS = $(am_marscan_OBJECTS)
+@@ -1009,15 +937,14 @@
+ marscan_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_martattributes_OBJECTS = martattributes.$(OBJEXT)
+ martattributes_OBJECTS = $(am_martattributes_OBJECTS)
+ martattributes_LDADD = $(LDADD)
+ martattributes_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_martdatasets_OBJECTS = martdatasets.$(OBJEXT)
+ martdatasets_OBJECTS = $(am_martdatasets_OBJECTS)
+@@ -1025,7 +952,7 @@
+ martdatasets_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_martfilters_OBJECTS = martfilters.$(OBJEXT)
+ martfilters_OBJECTS = $(am_martfilters_OBJECTS)
+@@ -1033,7 +960,7 @@
+ martfilters_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_martquery_OBJECTS = martquery.$(OBJEXT)
+ martquery_OBJECTS = $(am_martquery_OBJECTS)
+@@ -1041,7 +968,7 @@
+ martquery_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_martregistry_OBJECTS = martregistry.$(OBJEXT)
+ martregistry_OBJECTS = $(am_martregistry_OBJECTS)
+@@ -1049,7 +976,7 @@
+ martregistry_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_martseqs_OBJECTS = martseqs.$(OBJEXT)
+ martseqs_OBJECTS = $(am_martseqs_OBJECTS)
+@@ -1057,15 +984,14 @@
+ martseqs_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_maskambignuc_OBJECTS = maskambignuc.$(OBJEXT)
+ maskambignuc_OBJECTS = $(am_maskambignuc_OBJECTS)
+ maskambignuc_LDADD = $(LDADD)
+ maskambignuc_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_maskambigprot_OBJECTS = maskambigprot.$(OBJEXT)
+ maskambigprot_OBJECTS = $(am_maskambigprot_OBJECTS)
+@@ -1073,7 +999,7 @@
+ maskambigprot_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_maskfeat_OBJECTS = maskfeat.$(OBJEXT)
+ maskfeat_OBJECTS = $(am_maskfeat_OBJECTS)
+@@ -1081,31 +1007,28 @@
+ maskfeat_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_maskseq_OBJECTS = maskseq.$(OBJEXT)
+ maskseq_OBJECTS = $(am_maskseq_OBJECTS)
+ maskseq_LDADD = $(LDADD)
+ maskseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_matcher_OBJECTS = matcher.$(OBJEXT)
+ matcher_OBJECTS = $(am_matcher_OBJECTS)
+ matcher_LDADD = $(LDADD)
+ matcher_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_megamerger_OBJECTS = megamerger.$(OBJEXT)
+ megamerger_OBJECTS = $(am_megamerger_OBJECTS)
+ megamerger_LDADD = $(LDADD)
+ megamerger_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_merger_OBJECTS = merger.$(OBJEXT)
+ merger_OBJECTS = $(am_merger_OBJECTS)
+@@ -1113,47 +1036,42 @@
+ merger_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_msbar_OBJECTS = msbar.$(OBJEXT)
+ msbar_OBJECTS = $(am_msbar_OBJECTS)
+ msbar_LDADD = $(LDADD)
+ msbar_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_mwcontam_OBJECTS = mwcontam.$(OBJEXT)
+ mwcontam_OBJECTS = $(am_mwcontam_OBJECTS)
+ mwcontam_LDADD = $(LDADD)
+ mwcontam_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_mwfilter_OBJECTS = mwfilter.$(OBJEXT)
+ mwfilter_OBJECTS = $(am_mwfilter_OBJECTS)
+ mwfilter_LDADD = $(LDADD)
+ mwfilter_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_needle_OBJECTS = needle.$(OBJEXT)
+ needle_OBJECTS = $(am_needle_OBJECTS)
+ needle_LDADD = $(LDADD)
+ needle_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_needleall_OBJECTS = needleall.$(OBJEXT)
+ needleall_OBJECTS = $(am_needleall_OBJECTS)
+ needleall_LDADD = $(LDADD)
+ needleall_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_newcoils_OBJECTS = newcoils.$(OBJEXT)
+ newcoils_OBJECTS = $(am_newcoils_OBJECTS)
+@@ -1161,15 +1079,14 @@
+ newcoils_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_newcpgreport_OBJECTS = newcpgreport.$(OBJEXT)
+ newcpgreport_OBJECTS = $(am_newcpgreport_OBJECTS)
+ newcpgreport_LDADD = $(LDADD)
+ newcpgreport_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_newcpgseek_OBJECTS = newcpgseek.$(OBJEXT)
+ newcpgseek_OBJECTS = $(am_newcpgseek_OBJECTS)
+@@ -1177,7 +1094,7 @@
+ newcpgseek_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_newseq_OBJECTS = newseq.$(OBJEXT)
+ newseq_OBJECTS = $(am_newseq_OBJECTS)
+@@ -1185,63 +1102,56 @@
+ newseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_nohtml_OBJECTS = nohtml.$(OBJEXT)
+ nohtml_OBJECTS = $(am_nohtml_OBJECTS)
+ nohtml_LDADD = $(LDADD)
+ nohtml_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_noreturn_OBJECTS = noreturn.$(OBJEXT)
+ noreturn_OBJECTS = $(am_noreturn_OBJECTS)
+ noreturn_LDADD = $(LDADD)
+ noreturn_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_nospace_OBJECTS = nospace.$(OBJEXT)
+ nospace_OBJECTS = $(am_nospace_OBJECTS)
+ nospace_LDADD = $(LDADD)
+ nospace_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_notab_OBJECTS = notab.$(OBJEXT)
+ notab_OBJECTS = $(am_notab_OBJECTS)
+ notab_LDADD = $(LDADD)
+ notab_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_notseq_OBJECTS = notseq.$(OBJEXT)
+ notseq_OBJECTS = $(am_notseq_OBJECTS)
+ notseq_LDADD = $(LDADD)
+ notseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_nthseq_OBJECTS = nthseq.$(OBJEXT)
+ nthseq_OBJECTS = $(am_nthseq_OBJECTS)
+ nthseq_LDADD = $(LDADD)
+ nthseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_nthseqset_OBJECTS = nthseqset.$(OBJEXT)
+ nthseqset_OBJECTS = $(am_nthseqset_OBJECTS)
+ nthseqset_LDADD = $(LDADD)
+ nthseqset_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_octanol_OBJECTS = octanol.$(OBJEXT)
+ octanol_OBJECTS = $(am_octanol_OBJECTS)
+@@ -1249,23 +1159,21 @@
+ octanol_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_oddcomp_OBJECTS = oddcomp.$(OBJEXT)
+ oddcomp_OBJECTS = $(am_oddcomp_OBJECTS)
+ oddcomp_LDADD = $(LDADD)
+ oddcomp_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_origsplitter_OBJECTS = origsplitter.$(OBJEXT)
+ origsplitter_OBJECTS = $(am_origsplitter_OBJECTS)
+ origsplitter_LDADD = $(LDADD)
+ origsplitter_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_origunion_OBJECTS = origunion.$(OBJEXT)
+ origunion_OBJECTS = $(am_origunion_OBJECTS)
+@@ -1273,7 +1181,7 @@
+ origunion_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_palindrome_OBJECTS = palindrome.$(OBJEXT)
+ palindrome_OBJECTS = $(am_palindrome_OBJECTS)
+@@ -1281,7 +1189,7 @@
+ palindrome_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_pasteseq_OBJECTS = pasteseq.$(OBJEXT)
+ pasteseq_OBJECTS = $(am_pasteseq_OBJECTS)
+@@ -1289,23 +1197,21 @@
+ pasteseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_patmatdb_OBJECTS = patmatdb.$(OBJEXT)
+ patmatdb_OBJECTS = $(am_patmatdb_OBJECTS)
+ patmatdb_LDADD = $(LDADD)
+ patmatdb_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_patmatmotifs_OBJECTS = patmatmotifs.$(OBJEXT)
+ patmatmotifs_OBJECTS = $(am_patmatmotifs_OBJECTS)
+ patmatmotifs_LDADD = $(LDADD)
+ patmatmotifs_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_patmattest_OBJECTS = patmattest.$(OBJEXT)
+ patmattest_OBJECTS = $(am_patmattest_OBJECTS)
+@@ -1313,7 +1219,7 @@
+ patmattest_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_pepcoil_OBJECTS = pepcoil.$(OBJEXT)
+ pepcoil_OBJECTS = $(am_pepcoil_OBJECTS)
+@@ -1321,47 +1227,42 @@
+ pepcoil_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_pepinfo_OBJECTS = pepinfo.$(OBJEXT)
+ pepinfo_OBJECTS = $(am_pepinfo_OBJECTS)
+ pepinfo_LDADD = $(LDADD)
+ pepinfo_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_pepnet_OBJECTS = pepnet.$(OBJEXT)
+ pepnet_OBJECTS = $(am_pepnet_OBJECTS)
+ pepnet_LDADD = $(LDADD)
+ pepnet_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_pepstats_OBJECTS = pepstats.$(OBJEXT)
+ pepstats_OBJECTS = $(am_pepstats_OBJECTS)
+ pepstats_LDADD = $(LDADD)
+ pepstats_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_pepwheel_OBJECTS = pepwheel.$(OBJEXT)
+ pepwheel_OBJECTS = $(am_pepwheel_OBJECTS)
+ pepwheel_LDADD = $(LDADD)
+ pepwheel_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_pepwindow_OBJECTS = pepwindow.$(OBJEXT)
+ pepwindow_OBJECTS = $(am_pepwindow_OBJECTS)
+ pepwindow_LDADD = $(LDADD)
+ pepwindow_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_pepwindowall_OBJECTS = pepwindowall.$(OBJEXT)
+ pepwindowall_OBJECTS = $(am_pepwindowall_OBJECTS)
+@@ -1369,7 +1270,7 @@
+ pepwindowall_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_plotcon_OBJECTS = plotcon.$(OBJEXT)
+ plotcon_OBJECTS = $(am_plotcon_OBJECTS)
+@@ -1377,39 +1278,35 @@
+ plotcon_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_plotorf_OBJECTS = plotorf.$(OBJEXT)
+ plotorf_OBJECTS = $(am_plotorf_OBJECTS)
+ plotorf_LDADD = $(LDADD)
+ plotorf_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_polydot_OBJECTS = polydot.$(OBJEXT)
+ polydot_OBJECTS = $(am_polydot_OBJECTS)
+ polydot_LDADD = $(LDADD)
+ polydot_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_preg_OBJECTS = preg.$(OBJEXT)
+ preg_OBJECTS = $(am_preg_OBJECTS)
+ preg_LDADD = $(LDADD)
+ preg_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_prettyplot_OBJECTS = prettyplot.$(OBJEXT)
+ prettyplot_OBJECTS = $(am_prettyplot_OBJECTS)
+ prettyplot_LDADD = $(LDADD)
+ prettyplot_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_prettyseq_OBJECTS = prettyseq.$(OBJEXT)
+ prettyseq_OBJECTS = $(am_prettyseq_OBJECTS)
+@@ -1417,7 +1314,7 @@
+ prettyseq_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_prima_OBJECTS = prima.$(OBJEXT)
+ prima_OBJECTS = $(am_prima_OBJECTS)
+@@ -1425,23 +1322,21 @@
+ prima_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_primers_OBJECTS = primers.$(OBJEXT)
+ primers_OBJECTS = $(am_primers_OBJECTS)
+ primers_LDADD = $(LDADD)
+ primers_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_primersearch_OBJECTS = primersearch.$(OBJEXT)
+ primersearch_OBJECTS = $(am_primersearch_OBJECTS)
+ primersearch_LDADD = $(LDADD)
+ primersearch_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_printsextract_OBJECTS = printsextract.$(OBJEXT)
+ printsextract_OBJECTS = $(am_printsextract_OBJECTS)
+@@ -1449,7 +1344,7 @@
+ printsextract_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_profit_OBJECTS = profit.$(OBJEXT)
+ profit_OBJECTS = $(am_profit_OBJECTS)
+@@ -1457,31 +1352,28 @@
+ profit_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_prophecy_OBJECTS = prophecy.$(OBJEXT)
+ prophecy_OBJECTS = $(am_prophecy_OBJECTS)
+ prophecy_LDADD = $(LDADD)
+ prophecy_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_prophet_OBJECTS = prophet.$(OBJEXT)
+ prophet_OBJECTS = $(am_prophet_OBJECTS)
+ prophet_LDADD = $(LDADD)
+ prophet_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_prosextract_OBJECTS = prosextract.$(OBJEXT)
+ prosextract_OBJECTS = $(am_prosextract_OBJECTS)
+ prosextract_LDADD = $(LDADD)
+ prosextract_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_pscan_OBJECTS = pscan.$(OBJEXT)
+ pscan_OBJECTS = $(am_pscan_OBJECTS)
+@@ -1489,23 +1381,21 @@
+ pscan_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_psiphi_OBJECTS = psiphi.$(OBJEXT)
+ psiphi_OBJECTS = $(am_psiphi_OBJECTS)
+ psiphi_LDADD = $(LDADD)
+ psiphi_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_rebaseextract_OBJECTS = rebaseextract.$(OBJEXT)
+ rebaseextract_OBJECTS = $(am_rebaseextract_OBJECTS)
+ rebaseextract_LDADD = $(LDADD)
+ rebaseextract_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_recoder_OBJECTS = recoder.$(OBJEXT)
+ recoder_OBJECTS = $(am_recoder_OBJECTS)
+@@ -1513,71 +1403,63 @@
+ recoder_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_redata_OBJECTS = redata.$(OBJEXT)
+ redata_OBJECTS = $(am_redata_OBJECTS)
+ redata_LDADD = $(LDADD)
+ redata_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_remap_OBJECTS = remap.$(OBJEXT)
+ remap_OBJECTS = $(am_remap_OBJECTS)
+ remap_LDADD = $(LDADD)
+ remap_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_restover_OBJECTS = restover.$(OBJEXT)
+ restover_OBJECTS = $(am_restover_OBJECTS)
+ restover_LDADD = $(LDADD)
+ restover_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_restrict_OBJECTS = restrict.$(OBJEXT)
+ restrict_OBJECTS = $(am_restrict_OBJECTS)
+ restrict_LDADD = $(LDADD)
+ restrict_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_revseq_OBJECTS = revseq.$(OBJEXT)
+ revseq_OBJECTS = $(am_revseq_OBJECTS)
+ revseq_LDADD = $(LDADD)
+ revseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_seealso_OBJECTS = seealso.$(OBJEXT)
+ seealso_OBJECTS = $(am_seealso_OBJECTS)
+ seealso_LDADD = $(LDADD)
+ seealso_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_seqinfo_OBJECTS = seqinfo.$(OBJEXT)
+ seqinfo_OBJECTS = $(am_seqinfo_OBJECTS)
+ seqinfo_LDADD = $(LDADD)
+ seqinfo_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_seqmatchall_OBJECTS = seqmatchall.$(OBJEXT)
+ seqmatchall_OBJECTS = $(am_seqmatchall_OBJECTS)
+ seqmatchall_LDADD = $(LDADD)
+ seqmatchall_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_seqret_OBJECTS = seqret.$(OBJEXT)
+ seqret_OBJECTS = $(am_seqret_OBJECTS)
+@@ -1585,15 +1467,14 @@
+ seqret_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_seqretall_OBJECTS = seqretall.$(OBJEXT)
+ seqretall_OBJECTS = $(am_seqretall_OBJECTS)
+ seqretall_LDADD = $(LDADD)
+ seqretall_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_seqretallfeat_OBJECTS = seqretallfeat.$(OBJEXT)
+ seqretallfeat_OBJECTS = $(am_seqretallfeat_OBJECTS)
+@@ -1601,7 +1482,7 @@
+ seqretallfeat_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_seqretset_OBJECTS = seqretset.$(OBJEXT)
+ seqretset_OBJECTS = $(am_seqretset_OBJECTS)
+@@ -1609,7 +1490,7 @@
+ seqretset_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_seqretsetall_OBJECTS = seqretsetall.$(OBJEXT)
+ seqretsetall_OBJECTS = $(am_seqretsetall_OBJECTS)
+@@ -1617,7 +1498,7 @@
+ seqretsetall_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_seqretsingle_OBJECTS = seqretsingle.$(OBJEXT)
+ seqretsingle_OBJECTS = $(am_seqretsingle_OBJECTS)
+@@ -1625,7 +1506,7 @@
+ seqretsingle_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_seqretsplit_OBJECTS = seqretsplit.$(OBJEXT)
+ seqretsplit_OBJECTS = $(am_seqretsplit_OBJECTS)
+@@ -1633,7 +1514,7 @@
+ seqretsplit_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_seqrettype_OBJECTS = seqrettype.$(OBJEXT)
+ seqrettype_OBJECTS = $(am_seqrettype_OBJECTS)
+@@ -1641,7 +1522,7 @@
+ seqrettype_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_showalign_OBJECTS = showalign.$(OBJEXT)
+ showalign_OBJECTS = $(am_showalign_OBJECTS)
+@@ -1649,7 +1530,7 @@
+ showalign_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_showdb_OBJECTS = showdb.$(OBJEXT)
+ showdb_OBJECTS = $(am_showdb_OBJECTS)
+@@ -1657,47 +1538,42 @@
+ showdb_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_showfeat_OBJECTS = showfeat.$(OBJEXT)
+ showfeat_OBJECTS = $(am_showfeat_OBJECTS)
+ showfeat_LDADD = $(LDADD)
+ showfeat_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_showorf_OBJECTS = showorf.$(OBJEXT)
+ showorf_OBJECTS = $(am_showorf_OBJECTS)
+ showorf_LDADD = $(LDADD)
+ showorf_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_showpep_OBJECTS = showpep.$(OBJEXT)
+ showpep_OBJECTS = $(am_showpep_OBJECTS)
+ showpep_LDADD = $(LDADD)
+ showpep_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_showseq_OBJECTS = showseq.$(OBJEXT)
+ showseq_OBJECTS = $(am_showseq_OBJECTS)
+ showseq_LDADD = $(LDADD)
+ showseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_shuffleseq_OBJECTS = shuffleseq.$(OBJEXT)
+ shuffleseq_OBJECTS = $(am_shuffleseq_OBJECTS)
+ shuffleseq_LDADD = $(LDADD)
+ shuffleseq_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_sigcleave_OBJECTS = sigcleave.$(OBJEXT)
+ sigcleave_OBJECTS = $(am_sigcleave_OBJECTS)
+@@ -1705,7 +1581,7 @@
+ sigcleave_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_silent_OBJECTS = silent.$(OBJEXT)
+ silent_OBJECTS = $(am_silent_OBJECTS)
+@@ -1713,39 +1589,35 @@
+ silent_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_sirna_OBJECTS = sirna.$(OBJEXT)
+ sirna_OBJECTS = $(am_sirna_OBJECTS)
+ sirna_LDADD = $(LDADD)
+ sirna_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_sixpack_OBJECTS = sixpack.$(OBJEXT)
+ sixpack_OBJECTS = $(am_sixpack_OBJECTS)
+ sixpack_LDADD = $(LDADD)
+ sixpack_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_sizeseq_OBJECTS = sizeseq.$(OBJEXT)
+ sizeseq_OBJECTS = $(am_sizeseq_OBJECTS)
+ sizeseq_LDADD = $(LDADD)
+ sizeseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_skipredundant_OBJECTS = skipredundant.$(OBJEXT)
+ skipredundant_OBJECTS = $(am_skipredundant_OBJECTS)
+ skipredundant_LDADD = $(LDADD)
+ skipredundant_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_skipseq_OBJECTS = skipseq.$(OBJEXT)
+ skipseq_OBJECTS = $(am_skipseq_OBJECTS)
+@@ -1753,15 +1625,14 @@
+ skipseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ splitsource_SOURCES = splitsource.c
+ splitsource_OBJECTS = splitsource.$(OBJEXT)
+ splitsource_LDADD = $(LDADD)
+ splitsource_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_splitter_OBJECTS = splitter.$(OBJEXT)
+ splitter_OBJECTS = $(am_splitter_OBJECTS)
+@@ -1769,23 +1640,21 @@
+ splitter_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_sqltest_OBJECTS = sqltest.$(OBJEXT)
+ sqltest_OBJECTS = $(am_sqltest_OBJECTS)
+ sqltest_LDADD = $(LDADD)
+ sqltest_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_stretcher_OBJECTS = stretcher.$(OBJEXT)
+ stretcher_OBJECTS = $(am_stretcher_OBJECTS)
+ stretcher_LDADD = $(LDADD)
+ stretcher_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_stssearch_OBJECTS = stssearch.$(OBJEXT)
+ stssearch_OBJECTS = $(am_stssearch_OBJECTS)
+@@ -1793,7 +1662,7 @@
+ stssearch_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_supermatcher_OBJECTS = supermatcher.$(OBJEXT)
+ supermatcher_OBJECTS = $(am_supermatcher_OBJECTS)
+@@ -1801,7 +1670,7 @@
+ supermatcher_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_syco_OBJECTS = syco.$(OBJEXT)
+ syco_OBJECTS = $(am_syco_OBJECTS)
+@@ -1809,31 +1678,28 @@
+ syco_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_tcode_OBJECTS = tcode.$(OBJEXT)
+ tcode_OBJECTS = $(am_tcode_OBJECTS)
+ tcode_LDADD = $(LDADD)
+ tcode_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_testplot_OBJECTS = testplot.$(OBJEXT)
+ testplot_OBJECTS = $(am_testplot_OBJECTS)
+ testplot_LDADD = $(LDADD)
+ testplot_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_textsearch_OBJECTS = textsearch.$(OBJEXT)
+ textsearch_OBJECTS = $(am_textsearch_OBJECTS)
+ textsearch_LDADD = $(LDADD)
+ textsearch_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_tfextract_OBJECTS = tfextract.$(OBJEXT)
+ tfextract_OBJECTS = $(am_tfextract_OBJECTS)
+@@ -1841,7 +1707,7 @@
+ tfextract_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_tfm_OBJECTS = tfm.$(OBJEXT)
+ tfm_OBJECTS = $(am_tfm_OBJECTS)
+@@ -1849,31 +1715,28 @@
+ tfm_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_tfscan_OBJECTS = tfscan.$(OBJEXT)
+ tfscan_OBJECTS = $(am_tfscan_OBJECTS)
+ tfscan_LDADD = $(LDADD)
+ tfscan_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_tmap_OBJECTS = tmap.$(OBJEXT)
+ tmap_OBJECTS = $(am_tmap_OBJECTS)
+ tmap_LDADD = $(LDADD)
+ tmap_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_tranalign_OBJECTS = tranalign.$(OBJEXT)
+ tranalign_OBJECTS = $(am_tranalign_OBJECTS)
+ tranalign_LDADD = $(LDADD)
+ tranalign_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_transeq_OBJECTS = transeq.$(OBJEXT)
+ transeq_OBJECTS = $(am_transeq_OBJECTS)
+@@ -1881,15 +1744,14 @@
+ transeq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_treetypedisplay_OBJECTS = treetypedisplay.$(OBJEXT)
+ treetypedisplay_OBJECTS = $(am_treetypedisplay_OBJECTS)
+ treetypedisplay_LDADD = $(LDADD)
+ treetypedisplay_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_trimest_OBJECTS = trimest.$(OBJEXT)
+ trimest_OBJECTS = $(am_trimest_OBJECTS)
+@@ -1897,23 +1759,21 @@
+ trimest_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_trimseq_OBJECTS = trimseq.$(OBJEXT)
+ trimseq_OBJECTS = $(am_trimseq_OBJECTS)
+ trimseq_LDADD = $(LDADD)
+ trimseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_trimspace_OBJECTS = trimspace.$(OBJEXT)
+ trimspace_OBJECTS = $(am_trimspace_OBJECTS)
+ trimspace_LDADD = $(LDADD)
+ trimspace_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_twofeat_OBJECTS = twofeat.$(OBJEXT)
+ twofeat_OBJECTS = $(am_twofeat_OBJECTS)
+@@ -1921,23 +1781,21 @@
+ twofeat_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_union_OBJECTS = union.$(OBJEXT)
+ union_OBJECTS = $(am_union_OBJECTS)
+ union_LDADD = $(LDADD)
+ union_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_vectorstrip_OBJECTS = vectorstrip.$(OBJEXT)
+ vectorstrip_OBJECTS = $(am_vectorstrip_OBJECTS)
+ vectorstrip_LDADD = $(LDADD)
+ vectorstrip_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_water_OBJECTS = water.$(OBJEXT)
+ water_OBJECTS = $(am_water_OBJECTS)
+@@ -1945,31 +1803,28 @@
+ water_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_whichdb_OBJECTS = whichdb.$(OBJEXT)
+ whichdb_OBJECTS = $(am_whichdb_OBJECTS)
+ whichdb_LDADD = $(LDADD)
+ whichdb_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_wobble_OBJECTS = wobble.$(OBJEXT)
+ wobble_OBJECTS = $(am_wobble_OBJECTS)
+ wobble_LDADD = $(LDADD)
+ wobble_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_wordcount_OBJECTS = wordcount.$(OBJEXT)
+ wordcount_OBJECTS = $(am_wordcount_OBJECTS)
+ wordcount_LDADD = $(LDADD)
+ wordcount_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_wordfinder_OBJECTS = wordfinder.$(OBJEXT)
+ wordfinder_OBJECTS = $(am_wordfinder_OBJECTS)
+@@ -1977,7 +1832,7 @@
+ wordfinder_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_wordmatch_OBJECTS = wordmatch.$(OBJEXT)
+ wordmatch_OBJECTS = $(am_wordmatch_OBJECTS)
+@@ -1985,7 +1840,7 @@
+ wordmatch_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) \
++ ../ajax/core/libajax.la $(EXTRA_LDS) $(am__DEPENDENCIES_1) \
+ $(am__DEPENDENCIES_1)
+ am_wossname_OBJECTS = wossname.$(OBJEXT)
+ wossname_OBJECTS = $(am_wossname_OBJECTS)
+@@ -1993,16 +1848,14 @@
+ wossname_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ am_yank_OBJECTS = yank.$(OBJEXT)
+ yank_OBJECTS = $(am_yank_OBJECTS)
+ yank_LDADD = $(LDADD)
+ yank_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) \
+- $(am__DEPENDENCIES_1)
++ $(EXTRA_LDS) $(am__DEPENDENCIES_1) $(am__DEPENDENCIES_1)
+ DEFAULT_INCLUDES = -I. at am__isrc@
+ depcomp = $(SHELL) $(top_srcdir)/depcomp
+ am__depfiles_maybe = depfiles
+@@ -2285,6 +2138,8 @@
+ EXEEXT = @EXEEXT@
+ FGREP = @FGREP@
+ GREP = @GREP@
++HAVE_MEMMOVE = @HAVE_MEMMOVE@
++HAVE_STRERROR = @HAVE_STRERROR@
+ INSTALL = @INSTALL@
+ INSTALL_DATA = @INSTALL_DATA@
+ INSTALL_PROGRAM = @INSTALL_PROGRAM@
+diff -urP EMBOSS-6.3.1.orig/jemboss/images/Makefile.in EMBOSS-6.3.1/jemboss/images/Makefile.in
+--- EMBOSS-6.3.1.orig/jemboss/images/Makefile.in 2010-07-19 07:55:42.000000000 -0400
++++ EMBOSS-6.3.1/jemboss/images/Makefile.in 2010-08-02 17:23:26.349152370 -0400
+@@ -39,9 +39,9 @@
+ am__aclocal_m4_deps = $(top_srcdir)/m4/amd64.m4 \
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+- $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pngdriver.m4 \
+- $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+- $(top_srcdir)/configure.in
++ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
++ $(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/postgresql.m4 \
++ $(top_srcdir)/m4/sgi.m4 $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+ $(ACLOCAL_M4)
+ mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
+@@ -151,6 +151,8 @@
+ PCRE_POSIXLIB_VERSION = @PCRE_POSIXLIB_VERSION@
+ PCRE_VERSION = @PCRE_VERSION@
+ PG_CONFIG = @PG_CONFIG@
++PLPLOT_CFLAGS = @PLPLOT_CFLAGS@
++PLPLOT_LIBS = @PLPLOT_LIBS@
+ POSIX_MALLOC_THRESHOLD = @POSIX_MALLOC_THRESHOLD@
+ POSTGRESQL_CFLAGS = @POSTGRESQL_CFLAGS@
+ POSTGRESQL_LDFLAGS = @POSTGRESQL_LDFLAGS@
+@@ -241,9 +243,9 @@
+ exit 1;; \
+ esac; \
+ done; \
+- echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu jemboss/images/Makefile'; \
++ echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnits jemboss/images/Makefile'; \
+ $(am__cd) $(top_srcdir) && \
+- $(AUTOMAKE) --gnu jemboss/images/Makefile
++ $(AUTOMAKE) --gnits jemboss/images/Makefile
+ .PRECIOUS: Makefile
+ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+ @case '$?' in \
+diff -urP EMBOSS-6.3.1.orig/jemboss/lib/axis/Makefile.in EMBOSS-6.3.1/jemboss/lib/axis/Makefile.in
+--- EMBOSS-6.3.1.orig/jemboss/lib/axis/Makefile.in 2010-07-19 07:55:42.000000000 -0400
++++ EMBOSS-6.3.1/jemboss/lib/axis/Makefile.in 2010-08-02 17:23:26.561143289 -0400
+@@ -39,9 +39,9 @@
+ am__aclocal_m4_deps = $(top_srcdir)/m4/amd64.m4 \
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+- $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pngdriver.m4 \
+- $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+- $(top_srcdir)/configure.in
++ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
++ $(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/postgresql.m4 \
++ $(top_srcdir)/m4/sgi.m4 $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+ $(ACLOCAL_M4)
+ mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
+@@ -151,6 +151,8 @@
+ PCRE_POSIXLIB_VERSION = @PCRE_POSIXLIB_VERSION@
+ PCRE_VERSION = @PCRE_VERSION@
+ PG_CONFIG = @PG_CONFIG@
++PLPLOT_CFLAGS = @PLPLOT_CFLAGS@
++PLPLOT_LIBS = @PLPLOT_LIBS@
+ POSIX_MALLOC_THRESHOLD = @POSIX_MALLOC_THRESHOLD@
+ POSTGRESQL_CFLAGS = @POSTGRESQL_CFLAGS@
+ POSTGRESQL_LDFLAGS = @POSTGRESQL_LDFLAGS@
+@@ -240,9 +242,9 @@
+ exit 1;; \
+ esac; \
+ done; \
+- echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu jemboss/lib/axis/Makefile'; \
++ echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnits jemboss/lib/axis/Makefile'; \
+ $(am__cd) $(top_srcdir) && \
+- $(AUTOMAKE) --gnu jemboss/lib/axis/Makefile
++ $(AUTOMAKE) --gnits jemboss/lib/axis/Makefile
+ .PRECIOUS: Makefile
+ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+ @case '$?' in \
+diff -urP EMBOSS-6.3.1.orig/jemboss/lib/Makefile.in EMBOSS-6.3.1/jemboss/lib/Makefile.in
+--- EMBOSS-6.3.1.orig/jemboss/lib/Makefile.in 2010-07-19 07:55:42.000000000 -0400
++++ EMBOSS-6.3.1/jemboss/lib/Makefile.in 2010-08-02 17:23:26.489268446 -0400
+@@ -39,9 +39,9 @@
+ am__aclocal_m4_deps = $(top_srcdir)/m4/amd64.m4 \
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+- $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pngdriver.m4 \
+- $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+- $(top_srcdir)/configure.in
++ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
++ $(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/postgresql.m4 \
++ $(top_srcdir)/m4/sgi.m4 $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+ $(ACLOCAL_M4)
+ mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
+@@ -191,6 +191,8 @@
+ PCRE_POSIXLIB_VERSION = @PCRE_POSIXLIB_VERSION@
+ PCRE_VERSION = @PCRE_VERSION@
+ PG_CONFIG = @PG_CONFIG@
++PLPLOT_CFLAGS = @PLPLOT_CFLAGS@
++PLPLOT_LIBS = @PLPLOT_LIBS@
+ POSIX_MALLOC_THRESHOLD = @POSIX_MALLOC_THRESHOLD@
+ POSTGRESQL_CFLAGS = @POSTGRESQL_CFLAGS@
+ POSTGRESQL_LDFLAGS = @POSTGRESQL_LDFLAGS@
+@@ -280,9 +282,9 @@
+ exit 1;; \
+ esac; \
+ done; \
+- echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu jemboss/lib/Makefile'; \
++ echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnits jemboss/lib/Makefile'; \
+ $(am__cd) $(top_srcdir) && \
+- $(AUTOMAKE) --gnu jemboss/lib/Makefile
++ $(AUTOMAKE) --gnits jemboss/lib/Makefile
+ .PRECIOUS: Makefile
+ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+ @case '$?' in \
+diff -urP EMBOSS-6.3.1.orig/jemboss/Makefile.in EMBOSS-6.3.1/jemboss/Makefile.in
+--- EMBOSS-6.3.1.orig/jemboss/Makefile.in 2010-07-19 07:55:42.000000000 -0400
++++ EMBOSS-6.3.1/jemboss/Makefile.in 2010-08-02 17:23:26.161144127 -0400
+@@ -39,9 +39,9 @@
+ am__aclocal_m4_deps = $(top_srcdir)/m4/amd64.m4 \
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+- $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pngdriver.m4 \
+- $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+- $(top_srcdir)/configure.in
++ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
++ $(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/postgresql.m4 \
++ $(top_srcdir)/m4/sgi.m4 $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+ $(ACLOCAL_M4)
+ mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
+@@ -191,6 +191,8 @@
+ PCRE_POSIXLIB_VERSION = @PCRE_POSIXLIB_VERSION@
+ PCRE_VERSION = @PCRE_VERSION@
+ PG_CONFIG = @PG_CONFIG@
++PLPLOT_CFLAGS = @PLPLOT_CFLAGS@
++PLPLOT_LIBS = @PLPLOT_LIBS@
+ POSIX_MALLOC_THRESHOLD = @POSIX_MALLOC_THRESHOLD@
+ POSTGRESQL_CFLAGS = @POSTGRESQL_CFLAGS@
+ POSTGRESQL_LDFLAGS = @POSTGRESQL_LDFLAGS@
+diff -urP EMBOSS-6.3.1.orig/jemboss/resources/Makefile.in EMBOSS-6.3.1/jemboss/resources/Makefile.in
+--- EMBOSS-6.3.1.orig/jemboss/resources/Makefile.in 2010-07-19 07:55:42.000000000 -0400
++++ EMBOSS-6.3.1/jemboss/resources/Makefile.in 2010-08-02 17:23:26.634144057 -0400
+@@ -39,9 +39,9 @@
+ am__aclocal_m4_deps = $(top_srcdir)/m4/amd64.m4 \
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+- $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pngdriver.m4 \
+- $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+- $(top_srcdir)/configure.in
++ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
++ $(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/postgresql.m4 \
++ $(top_srcdir)/m4/sgi.m4 $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+ $(ACLOCAL_M4)
+ mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
+@@ -151,6 +151,8 @@
+ PCRE_POSIXLIB_VERSION = @PCRE_POSIXLIB_VERSION@
+ PCRE_VERSION = @PCRE_VERSION@
+ PG_CONFIG = @PG_CONFIG@
++PLPLOT_CFLAGS = @PLPLOT_CFLAGS@
++PLPLOT_LIBS = @PLPLOT_LIBS@
+ POSIX_MALLOC_THRESHOLD = @POSIX_MALLOC_THRESHOLD@
+ POSTGRESQL_CFLAGS = @POSTGRESQL_CFLAGS@
+ POSTGRESQL_LDFLAGS = @POSTGRESQL_LDFLAGS@
+@@ -244,9 +246,9 @@
+ exit 1;; \
+ esac; \
+ done; \
+- echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu jemboss/resources/Makefile'; \
++ echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnits jemboss/resources/Makefile'; \
+ $(am__cd) $(top_srcdir) && \
+- $(AUTOMAKE) --gnu jemboss/resources/Makefile
++ $(AUTOMAKE) --gnits jemboss/resources/Makefile
+ .PRECIOUS: Makefile
+ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+ @case '$?' in \
+diff -urP EMBOSS-6.3.1.orig/jemboss/utils/Makefile.in EMBOSS-6.3.1/jemboss/utils/Makefile.in
+--- EMBOSS-6.3.1.orig/jemboss/utils/Makefile.in 2010-07-19 07:55:42.000000000 -0400
++++ EMBOSS-6.3.1/jemboss/utils/Makefile.in 2010-08-02 17:23:26.712212083 -0400
+@@ -39,9 +39,9 @@
+ am__aclocal_m4_deps = $(top_srcdir)/m4/amd64.m4 \
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+- $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pngdriver.m4 \
+- $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+- $(top_srcdir)/configure.in
++ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
++ $(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/postgresql.m4 \
++ $(top_srcdir)/m4/sgi.m4 $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+ $(ACLOCAL_M4)
+ mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
+@@ -151,6 +151,8 @@
+ PCRE_POSIXLIB_VERSION = @PCRE_POSIXLIB_VERSION@
+ PCRE_VERSION = @PCRE_VERSION@
+ PG_CONFIG = @PG_CONFIG@
++PLPLOT_CFLAGS = @PLPLOT_CFLAGS@
++PLPLOT_LIBS = @PLPLOT_LIBS@
+ POSIX_MALLOC_THRESHOLD = @POSIX_MALLOC_THRESHOLD@
+ POSTGRESQL_CFLAGS = @POSTGRESQL_CFLAGS@
+ POSTGRESQL_LDFLAGS = @POSTGRESQL_LDFLAGS@
+@@ -239,9 +241,9 @@
+ exit 1;; \
+ esac; \
+ done; \
+- echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu jemboss/utils/Makefile'; \
++ echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnits jemboss/utils/Makefile'; \
+ $(am__cd) $(top_srcdir) && \
+- $(AUTOMAKE) --gnu jemboss/utils/Makefile
++ $(AUTOMAKE) --gnits jemboss/utils/Makefile
+ .PRECIOUS: Makefile
+ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+ @case '$?' in \
+diff -urP EMBOSS-6.3.1.orig/Makefile.in EMBOSS-6.3.1/Makefile.in
+--- EMBOSS-6.3.1.orig/Makefile.in 2010-08-02 17:23:03.950268376 -0400
++++ EMBOSS-6.3.1/Makefile.in 2010-08-02 17:23:27.458268375 -0400
+@@ -43,9 +43,8 @@
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
+- $(top_srcdir)/m4/pngdriver.m4 \
+- $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+- $(top_srcdir)/configure.in
++ $(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/postgresql.m4 \
++ $(top_srcdir)/m4/sgi.m4 $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+ $(ACLOCAL_M4)
+ am__CONFIG_DISTCLEAN_FILES = config.status config.cache config.log \
+diff -urP EMBOSS-6.3.1.orig/nucleus/Makefile.in EMBOSS-6.3.1/nucleus/Makefile.in
+--- EMBOSS-6.3.1.orig/nucleus/Makefile.in 2010-08-02 17:23:03.951268237 -0400
++++ EMBOSS-6.3.1/nucleus/Makefile.in 2010-08-02 17:23:26.813142660 -0400
+@@ -43,9 +43,8 @@
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
+- $(top_srcdir)/m4/pngdriver.m4 \
+- $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+- $(top_srcdir)/configure.in
++ $(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/postgresql.m4 \
++ $(top_srcdir)/m4/sgi.m4 $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+ $(ACLOCAL_M4)
+ mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
+@@ -135,6 +134,8 @@
+ EXEEXT = @EXEEXT@
+ FGREP = @FGREP@
+ GREP = @GREP@
++HAVE_MEMMOVE = @HAVE_MEMMOVE@
++HAVE_STRERROR = @HAVE_STRERROR@
+ INSTALL = @INSTALL@
+ INSTALL_DATA = @INSTALL_DATA@
+ INSTALL_PROGRAM = @INSTALL_PROGRAM@
+diff -urP EMBOSS-6.3.1.orig/test/data/Makefile.in EMBOSS-6.3.1/test/data/Makefile.in
+--- EMBOSS-6.3.1.orig/test/data/Makefile.in 2010-07-19 07:55:42.000000000 -0400
++++ EMBOSS-6.3.1/test/data/Makefile.in 2010-08-02 17:23:26.956142939 -0400
+@@ -39,9 +39,9 @@
+ am__aclocal_m4_deps = $(top_srcdir)/m4/amd64.m4 \
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+- $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pngdriver.m4 \
+- $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+- $(top_srcdir)/configure.in
++ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
++ $(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/postgresql.m4 \
++ $(top_srcdir)/m4/sgi.m4 $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+ $(ACLOCAL_M4)
+ mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
+@@ -151,6 +151,8 @@
+ PCRE_POSIXLIB_VERSION = @PCRE_POSIXLIB_VERSION@
+ PCRE_VERSION = @PCRE_VERSION@
+ PG_CONFIG = @PG_CONFIG@
++PLPLOT_CFLAGS = @PLPLOT_CFLAGS@
++PLPLOT_LIBS = @PLPLOT_LIBS@
+ POSIX_MALLOC_THRESHOLD = @POSIX_MALLOC_THRESHOLD@
+ POSTGRESQL_CFLAGS = @POSTGRESQL_CFLAGS@
+ POSTGRESQL_LDFLAGS = @POSTGRESQL_LDFLAGS@
+@@ -255,9 +257,9 @@
+ exit 1;; \
+ esac; \
+ done; \
+- echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu test/data/Makefile'; \
++ echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnits test/data/Makefile'; \
+ $(am__cd) $(top_srcdir) && \
+- $(AUTOMAKE) --gnu test/data/Makefile
++ $(AUTOMAKE) --gnits test/data/Makefile
+ .PRECIOUS: Makefile
+ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+ @case '$?' in \
+diff -urP EMBOSS-6.3.1.orig/test/embl/Makefile.in EMBOSS-6.3.1/test/embl/Makefile.in
+--- EMBOSS-6.3.1.orig/test/embl/Makefile.in 2010-07-19 07:55:42.000000000 -0400
++++ EMBOSS-6.3.1/test/embl/Makefile.in 2010-08-02 17:23:27.028142869 -0400
+@@ -39,9 +39,9 @@
+ am__aclocal_m4_deps = $(top_srcdir)/m4/amd64.m4 \
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+- $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pngdriver.m4 \
+- $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+- $(top_srcdir)/configure.in
++ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
++ $(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/postgresql.m4 \
++ $(top_srcdir)/m4/sgi.m4 $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+ $(ACLOCAL_M4)
+ mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
+@@ -151,6 +151,8 @@
+ PCRE_POSIXLIB_VERSION = @PCRE_POSIXLIB_VERSION@
+ PCRE_VERSION = @PCRE_VERSION@
+ PG_CONFIG = @PG_CONFIG@
++PLPLOT_CFLAGS = @PLPLOT_CFLAGS@
++PLPLOT_LIBS = @PLPLOT_LIBS@
+ POSIX_MALLOC_THRESHOLD = @POSIX_MALLOC_THRESHOLD@
+ POSTGRESQL_CFLAGS = @POSTGRESQL_CFLAGS@
+ POSTGRESQL_LDFLAGS = @POSTGRESQL_LDFLAGS@
+@@ -242,9 +244,9 @@
+ exit 1;; \
+ esac; \
+ done; \
+- echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu test/embl/Makefile'; \
++ echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnits test/embl/Makefile'; \
+ $(am__cd) $(top_srcdir) && \
+- $(AUTOMAKE) --gnu test/embl/Makefile
++ $(AUTOMAKE) --gnits test/embl/Makefile
+ .PRECIOUS: Makefile
+ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+ @case '$?' in \
+diff -urP EMBOSS-6.3.1.orig/test/genbank/Makefile.in EMBOSS-6.3.1/test/genbank/Makefile.in
+--- EMBOSS-6.3.1.orig/test/genbank/Makefile.in 2010-07-19 07:55:42.000000000 -0400
++++ EMBOSS-6.3.1/test/genbank/Makefile.in 2010-08-02 17:23:27.101268096 -0400
+@@ -39,9 +39,9 @@
+ am__aclocal_m4_deps = $(top_srcdir)/m4/amd64.m4 \
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+- $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pngdriver.m4 \
+- $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+- $(top_srcdir)/configure.in
++ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
++ $(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/postgresql.m4 \
++ $(top_srcdir)/m4/sgi.m4 $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+ $(ACLOCAL_M4)
+ mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
+@@ -151,6 +151,8 @@
+ PCRE_POSIXLIB_VERSION = @PCRE_POSIXLIB_VERSION@
+ PCRE_VERSION = @PCRE_VERSION@
+ PG_CONFIG = @PG_CONFIG@
++PLPLOT_CFLAGS = @PLPLOT_CFLAGS@
++PLPLOT_LIBS = @PLPLOT_LIBS@
+ POSIX_MALLOC_THRESHOLD = @POSIX_MALLOC_THRESHOLD@
+ POSTGRESQL_CFLAGS = @POSTGRESQL_CFLAGS@
+ POSTGRESQL_LDFLAGS = @POSTGRESQL_LDFLAGS@
+@@ -242,9 +244,9 @@
+ exit 1;; \
+ esac; \
+ done; \
+- echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu test/genbank/Makefile'; \
++ echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnits test/genbank/Makefile'; \
+ $(am__cd) $(top_srcdir) && \
+- $(AUTOMAKE) --gnu test/genbank/Makefile
++ $(AUTOMAKE) --gnits test/genbank/Makefile
+ .PRECIOUS: Makefile
+ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+ @case '$?' in \
+diff -urP EMBOSS-6.3.1.orig/test/Makefile.in EMBOSS-6.3.1/test/Makefile.in
+--- EMBOSS-6.3.1.orig/test/Makefile.in 2010-07-19 07:55:42.000000000 -0400
++++ EMBOSS-6.3.1/test/Makefile.in 2010-08-02 17:23:26.884143009 -0400
+@@ -39,9 +39,9 @@
+ am__aclocal_m4_deps = $(top_srcdir)/m4/amd64.m4 \
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+- $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pngdriver.m4 \
+- $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+- $(top_srcdir)/configure.in
++ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
++ $(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/postgresql.m4 \
++ $(top_srcdir)/m4/sgi.m4 $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+ $(ACLOCAL_M4)
+ mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
+@@ -167,6 +167,8 @@
+ PCRE_POSIXLIB_VERSION = @PCRE_POSIXLIB_VERSION@
+ PCRE_VERSION = @PCRE_VERSION@
+ PG_CONFIG = @PG_CONFIG@
++PLPLOT_CFLAGS = @PLPLOT_CFLAGS@
++PLPLOT_LIBS = @PLPLOT_LIBS@
+ POSIX_MALLOC_THRESHOLD = @POSIX_MALLOC_THRESHOLD@
+ POSTGRESQL_CFLAGS = @POSTGRESQL_CFLAGS@
+ POSTGRESQL_LDFLAGS = @POSTGRESQL_LDFLAGS@
+@@ -253,9 +255,9 @@
+ exit 1;; \
+ esac; \
+ done; \
+- echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu test/Makefile'; \
++ echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnits test/Makefile'; \
+ $(am__cd) $(top_srcdir) && \
+- $(AUTOMAKE) --gnu test/Makefile
++ $(AUTOMAKE) --gnits test/Makefile
+ .PRECIOUS: Makefile
+ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+ @case '$?' in \
+diff -urP EMBOSS-6.3.1.orig/test/pir/Makefile.in EMBOSS-6.3.1/test/pir/Makefile.in
+--- EMBOSS-6.3.1.orig/test/pir/Makefile.in 2010-07-19 07:55:42.000000000 -0400
++++ EMBOSS-6.3.1/test/pir/Makefile.in 2010-08-02 17:23:27.172268026 -0400
+@@ -39,9 +39,9 @@
+ am__aclocal_m4_deps = $(top_srcdir)/m4/amd64.m4 \
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+- $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pngdriver.m4 \
+- $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+- $(top_srcdir)/configure.in
++ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
++ $(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/postgresql.m4 \
++ $(top_srcdir)/m4/sgi.m4 $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+ $(ACLOCAL_M4)
+ mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
+@@ -151,6 +151,8 @@
+ PCRE_POSIXLIB_VERSION = @PCRE_POSIXLIB_VERSION@
+ PCRE_VERSION = @PCRE_VERSION@
+ PG_CONFIG = @PG_CONFIG@
++PLPLOT_CFLAGS = @PLPLOT_CFLAGS@
++PLPLOT_LIBS = @PLPLOT_LIBS@
+ POSIX_MALLOC_THRESHOLD = @POSIX_MALLOC_THRESHOLD@
+ POSTGRESQL_CFLAGS = @POSTGRESQL_CFLAGS@
+ POSTGRESQL_LDFLAGS = @POSTGRESQL_LDFLAGS@
+@@ -245,9 +247,9 @@
+ exit 1;; \
+ esac; \
+ done; \
+- echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu test/pir/Makefile'; \
++ echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnits test/pir/Makefile'; \
+ $(am__cd) $(top_srcdir) && \
+- $(AUTOMAKE) --gnu test/pir/Makefile
++ $(AUTOMAKE) --gnits test/pir/Makefile
+ .PRECIOUS: Makefile
+ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+ @case '$?' in \
+diff -urP EMBOSS-6.3.1.orig/test/swiss/Makefile.in EMBOSS-6.3.1/test/swiss/Makefile.in
+--- EMBOSS-6.3.1.orig/test/swiss/Makefile.in 2010-07-19 07:55:42.000000000 -0400
++++ EMBOSS-6.3.1/test/swiss/Makefile.in 2010-08-02 17:23:27.241267677 -0400
+@@ -39,9 +39,9 @@
+ am__aclocal_m4_deps = $(top_srcdir)/m4/amd64.m4 \
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+- $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pngdriver.m4 \
+- $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+- $(top_srcdir)/configure.in
++ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
++ $(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/postgresql.m4 \
++ $(top_srcdir)/m4/sgi.m4 $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+ $(ACLOCAL_M4)
+ mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
+@@ -151,6 +151,8 @@
+ PCRE_POSIXLIB_VERSION = @PCRE_POSIXLIB_VERSION@
+ PCRE_VERSION = @PCRE_VERSION@
+ PG_CONFIG = @PG_CONFIG@
++PLPLOT_CFLAGS = @PLPLOT_CFLAGS@
++PLPLOT_LIBS = @PLPLOT_LIBS@
+ POSIX_MALLOC_THRESHOLD = @POSIX_MALLOC_THRESHOLD@
+ POSTGRESQL_CFLAGS = @POSTGRESQL_CFLAGS@
+ POSTGRESQL_LDFLAGS = @POSTGRESQL_LDFLAGS@
+@@ -240,9 +242,9 @@
+ exit 1;; \
+ esac; \
+ done; \
+- echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu test/swiss/Makefile'; \
++ echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnits test/swiss/Makefile'; \
+ $(am__cd) $(top_srcdir) && \
+- $(AUTOMAKE) --gnu test/swiss/Makefile
++ $(AUTOMAKE) --gnits test/swiss/Makefile
+ .PRECIOUS: Makefile
+ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+ @case '$?' in \
+diff -urP EMBOSS-6.3.1.orig/test/swnew/Makefile.in EMBOSS-6.3.1/test/swnew/Makefile.in
+--- EMBOSS-6.3.1.orig/test/swnew/Makefile.in 2010-07-19 07:55:42.000000000 -0400
++++ EMBOSS-6.3.1/test/swnew/Makefile.in 2010-08-02 17:23:27.311267887 -0400
+@@ -39,9 +39,9 @@
+ am__aclocal_m4_deps = $(top_srcdir)/m4/amd64.m4 \
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+- $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pngdriver.m4 \
+- $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+- $(top_srcdir)/configure.in
++ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
++ $(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/postgresql.m4 \
++ $(top_srcdir)/m4/sgi.m4 $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+ $(ACLOCAL_M4)
+ mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
+@@ -151,6 +151,8 @@
+ PCRE_POSIXLIB_VERSION = @PCRE_POSIXLIB_VERSION@
+ PCRE_VERSION = @PCRE_VERSION@
+ PG_CONFIG = @PG_CONFIG@
++PLPLOT_CFLAGS = @PLPLOT_CFLAGS@
++PLPLOT_LIBS = @PLPLOT_LIBS@
+ POSIX_MALLOC_THRESHOLD = @POSIX_MALLOC_THRESHOLD@
+ POSTGRESQL_CFLAGS = @POSTGRESQL_CFLAGS@
+ POSTGRESQL_LDFLAGS = @POSTGRESQL_LDFLAGS@
+@@ -241,9 +243,9 @@
+ exit 1;; \
+ esac; \
+ done; \
+- echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu test/swnew/Makefile'; \
++ echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnits test/swnew/Makefile'; \
+ $(am__cd) $(top_srcdir) && \
+- $(AUTOMAKE) --gnu test/swnew/Makefile
++ $(AUTOMAKE) --gnits test/swnew/Makefile
+ .PRECIOUS: Makefile
+ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+ @case '$?' in \
+diff -urP EMBOSS-6.3.1.orig/test/testdb/Makefile.in EMBOSS-6.3.1/test/testdb/Makefile.in
+--- EMBOSS-6.3.1.orig/test/testdb/Makefile.in 2010-07-19 07:55:42.000000000 -0400
++++ EMBOSS-6.3.1/test/testdb/Makefile.in 2010-08-02 17:23:27.381267677 -0400
+@@ -39,9 +39,9 @@
+ am__aclocal_m4_deps = $(top_srcdir)/m4/amd64.m4 \
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+- $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pngdriver.m4 \
+- $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+- $(top_srcdir)/configure.in
++ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
++ $(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/postgresql.m4 \
++ $(top_srcdir)/m4/sgi.m4 $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+ $(ACLOCAL_M4)
+ mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
+@@ -151,6 +151,8 @@
+ PCRE_POSIXLIB_VERSION = @PCRE_POSIXLIB_VERSION@
+ PCRE_VERSION = @PCRE_VERSION@
+ PG_CONFIG = @PG_CONFIG@
++PLPLOT_CFLAGS = @PLPLOT_CFLAGS@
++PLPLOT_LIBS = @PLPLOT_LIBS@
+ POSIX_MALLOC_THRESHOLD = @POSIX_MALLOC_THRESHOLD@
+ POSTGRESQL_CFLAGS = @POSTGRESQL_CFLAGS@
+ POSTGRESQL_LDFLAGS = @POSTGRESQL_LDFLAGS@
+@@ -239,9 +241,9 @@
+ exit 1;; \
+ esac; \
+ done; \
+- echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu test/testdb/Makefile'; \
++ echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnits test/testdb/Makefile'; \
+ $(am__cd) $(top_srcdir) && \
+- $(AUTOMAKE) --gnu test/testdb/Makefile
++ $(AUTOMAKE) --gnits test/testdb/Makefile
+ .PRECIOUS: Makefile
+ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+ @case '$?' in \
diff --git a/EMBOSS-6.3.1-system-expat.patch b/EMBOSS-6.3.1-system-expat.patch
new file mode 100644
index 0000000..e964356
--- /dev/null
+++ b/EMBOSS-6.3.1-system-expat.patch
@@ -0,0 +1,80 @@
+diff -up EMBOSS-6.3.1/ajax/acd/Makefile.am.system-expat EMBOSS-6.3.1/ajax/acd/Makefile.am
+diff -up EMBOSS-6.3.1/ajax/acd/Makefile.in.system-expat EMBOSS-6.3.1/ajax/acd/Makefile.in
+diff -up EMBOSS-6.3.1/ajax/ajaxdb/Makefile.am.system-expat EMBOSS-6.3.1/ajax/ajaxdb/Makefile.am
+diff -up EMBOSS-6.3.1/ajax/ajaxdb/Makefile.in.system-expat EMBOSS-6.3.1/ajax/ajaxdb/Makefile.in
+diff -up EMBOSS-6.3.1/ajax/core/Makefile.am.system-expat EMBOSS-6.3.1/ajax/core/Makefile.am
+diff -up EMBOSS-6.3.1/ajax/core/Makefile.in.system-expat EMBOSS-6.3.1/ajax/core/Makefile.in
+diff -up EMBOSS-6.3.1/ajax/graphics/Makefile.am.system-expat EMBOSS-6.3.1/ajax/graphics/Makefile.am
+diff -up EMBOSS-6.3.1/ajax/graphics/Makefile.in.system-expat EMBOSS-6.3.1/ajax/graphics/Makefile.in
+diff -up EMBOSS-6.3.1/ajax/Makefile.am.system-expat EMBOSS-6.3.1/ajax/Makefile.am
+diff -up EMBOSS-6.3.1/ajax/Makefile.in.system-expat EMBOSS-6.3.1/ajax/Makefile.in
+diff -up EMBOSS-6.3.1/configure.in.system-expat EMBOSS-6.3.1/configure.in
+--- EMBOSS-6.3.1/configure.in.system-expat 2010-08-02 17:11:31.000000000 -0400
++++ EMBOSS-6.3.1/configure.in 2010-08-02 17:12:11.831269942 -0400
+@@ -425,6 +425,7 @@ AC_ARG_ENABLE(systemlibs,
+ if test "${enable_systemlibs}" = "yes" ; then
+ have_systemlibs=yes
+ AC_CHECK_LIB(pcre, pcre_compile)
++ AC_CHECK_LIB(expat, XML_ParserCreate)
+ fi
+ AM_CONDITIONAL(ESYSTEMLIBS, test "$have_systemlibs" = "yes")
+ AC_SUBST(ESYSTEMLIBS)
+diff -up EMBOSS-6.3.1/configure.system-expat EMBOSS-6.3.1/configure
+--- EMBOSS-6.3.1/configure.system-expat 2010-08-02 17:11:31.825142800 -0400
++++ EMBOSS-6.3.1/configure 2010-08-02 17:14:33.060269076 -0400
+@@ -15339,6 +15339,51 @@ _ACEOF
+
+ fi
+
++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for XML_ParserCreate in -lexpat" >&5
++$as_echo_n "checking for XML_ParserCreate in -lexpat... " >&6; }
++if test "${ac_cv_lib_expat_XML_ParserCreate+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ ac_check_lib_save_LIBS=$LIBS
++LIBS="-lexpat $LIBS"
++cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++/* Override any GCC internal prototype to avoid an error.
++ Use char because int might match the return type of a GCC
++ builtin and then its argument prototype would still apply. */
++#ifdef __cplusplus
++extern "C"
++#endif
++char XML_ParserCreate ();
++int
++main ()
++{
++return XML_ParserCreate ();
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_link "$LINENO"; then :
++ ac_cv_lib_expat_XML_ParserCreate=yes
++else
++ ac_cv_lib_expat_XML_ParserCreate=no
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext conftest.$ac_ext
++LIBS=$ac_check_lib_save_LIBS
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_expat_XML_ParserCreate" >&5
++$as_echo "$ac_cv_lib_expat_XML_ParserCreate" >&6; }
++if test "x$ac_cv_lib_expat_XML_ParserCreate" = x""yes; then :
++ cat >>confdefs.h <<_ACEOF
++#define HAVE_LIBEXPAT 1
++_ACEOF
++
++ LIBS="-lexpat $LIBS"
++
++fi
++
+ fi
+ if test "$have_systemlibs" = "yes"; then
+ ESYSTEMLIBS_TRUE=
+diff -up EMBOSS-6.3.1/emboss/Makefile.am.system-expat EMBOSS-6.3.1/emboss/Makefile.am
+diff -up EMBOSS-6.3.1/emboss/Makefile.in.system-expat EMBOSS-6.3.1/emboss/Makefile.in
+diff -up EMBOSS-6.3.1/nucleus/Makefile.am.system-expat EMBOSS-6.3.1/nucleus/Makefile.am
+diff -up EMBOSS-6.3.1/nucleus/Makefile.in.system-expat EMBOSS-6.3.1/nucleus/Makefile.in
diff --git a/EMBOSS-6.3.1-system-hack.patch b/EMBOSS-6.3.1-system-hack.patch
new file mode 100644
index 0000000..0407e7f
--- /dev/null
+++ b/EMBOSS-6.3.1-system-hack.patch
@@ -0,0 +1,23 @@
+diff -up EMBOSS-6.3.1/ajax/Makefile.am.system EMBOSS-6.3.1/ajax/Makefile.am
+--- EMBOSS-6.3.1/ajax/Makefile.am.system 2010-08-02 17:26:39.537175842 -0400
++++ EMBOSS-6.3.1/ajax/Makefile.am 2010-08-02 17:26:50.081151953 -0400
+@@ -1,6 +1,4 @@
+ ## Process this file with automake to produce Makefile.in
+-if !ESYSTEMLIBS
+-EXTRA_DIRS = expat zlib pcre
+-endif
++EXTRA_DIRS =
+
+ SUBDIRS = $(EXTRA_DIRS) core graphics ensembl ajaxdb acd
+diff -up EMBOSS-6.3.1/ajax/Makefile.in.system EMBOSS-6.3.1/ajax/Makefile.in
+--- EMBOSS-6.3.1/ajax/Makefile.in.system 2010-08-02 17:27:13.560269914 -0400
++++ EMBOSS-6.3.1/ajax/Makefile.in 2010-08-02 17:27:24.406144161 -0400
+@@ -242,7 +242,7 @@ target_alias = @target_alias@
+ top_build_prefix = @top_build_prefix@
+ top_builddir = @top_builddir@
+ top_srcdir = @top_srcdir@
+- at ESYSTEMLIBS_FALSE@EXTRA_DIRS = expat zlib pcre
++ at ESYSTEMLIBS_FALSE@EXTRA_DIRS =
+ SUBDIRS = $(EXTRA_DIRS) core graphics ensembl ajaxdb acd
+ all: all-recursive
+
diff --git a/EMBOSS-6.3.1-system-pcre.patch b/EMBOSS-6.3.1-system-pcre.patch
new file mode 100644
index 0000000..615a8c0
--- /dev/null
+++ b/EMBOSS-6.3.1-system-pcre.patch
@@ -0,0 +1,2776 @@
+diff -up EMBOSS-6.3.1/ajax/acd/Makefile.am.system-pcre EMBOSS-6.3.1/ajax/acd/Makefile.am
+--- EMBOSS-6.3.1/ajax/acd/Makefile.am.system-pcre 2010-06-16 07:36:00.000000000 -0400
++++ EMBOSS-6.3.1/ajax/acd/Makefile.am 2010-08-02 15:53:45.289153815 -0400
+@@ -13,10 +13,10 @@ CYGWIN_LDACD = -L../../plplot -L../pcre
+ endif
+
+ if !ESYSTEMLIBS
+-EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/zlib
++EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/zlib -I$(top_srcdir)/ajax/pcre
+ endif
+
+-INCLUDES = -I$(top_srcdir)/plplot -I$(top_srcdir)/ajax/pcre \
++INCLUDES = -I$(top_srcdir)/plplot \
+ $(EXTRA_INCLUDES) \
+ -I$(top_srcdir)/ajax/core \
+ -I$(top_srcdir)/ajax/graphics \
+diff -up EMBOSS-6.3.1/ajax/acd/Makefile.in.system-pcre EMBOSS-6.3.1/ajax/acd/Makefile.in
+--- EMBOSS-6.3.1/ajax/acd/Makefile.in.system-pcre 2010-07-19 07:55:40.000000000 -0400
++++ EMBOSS-6.3.1/ajax/acd/Makefile.in 2010-08-02 15:54:22.726269678 -0400
+@@ -130,8 +130,6 @@ ESYSTEMLIBS = @ESYSTEMLIBS@
+ EXEEXT = @EXEEXT@
+ FGREP = @FGREP@
+ GREP = @GREP@
+-HAVE_MEMMOVE = @HAVE_MEMMOVE@
+-HAVE_STRERROR = @HAVE_STRERROR@
+ INSTALL = @INSTALL@
+ INSTALL_DATA = @INSTALL_DATA@
+ INSTALL_PROGRAM = @INSTALL_PROGRAM@
+@@ -258,8 +256,8 @@ AM_CFLAGS = $(WARN_CFLAGS) $(DEVWARN_CFL
+ @ISCYGWIN_TRUE at -L../graphics -L../ensembl -L../ajaxdb -lajaxdb -lensembl -lajaxg -lajax \
+ @ISCYGWIN_TRUE at -leplplot -leexpat -lepcre -lezlib
+
+- at ESYSTEMLIBS_FALSE@EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/zlib
+-INCLUDES = -I$(top_srcdir)/plplot -I$(top_srcdir)/ajax/pcre \
++ at ESYSTEMLIBS_FALSE@EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/zlib -I$(top_srcdir)/ajax/pcre
++INCLUDES = -I$(top_srcdir)/plplot \
+ $(EXTRA_INCLUDES) \
+ -I$(top_srcdir)/ajax/core \
+ -I$(top_srcdir)/ajax/graphics \
+@@ -286,9 +284,9 @@ $(srcdir)/Makefile.in: $(srcdir)/Makefi
+ exit 1;; \
+ esac; \
+ done; \
+- echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu ajax/acd/Makefile'; \
++ echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnits ajax/acd/Makefile'; \
+ $(am__cd) $(top_srcdir) && \
+- $(AUTOMAKE) --gnu ajax/acd/Makefile
++ $(AUTOMAKE) --gnits ajax/acd/Makefile
+ .PRECIOUS: Makefile
+ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+ @case '$?' in \
+diff -up EMBOSS-6.3.1/ajax/ajaxdb/Makefile.am.system-pcre EMBOSS-6.3.1/ajax/ajaxdb/Makefile.am
+--- EMBOSS-6.3.1/ajax/ajaxdb/Makefile.am.system-pcre 2010-06-16 07:36:00.000000000 -0400
++++ EMBOSS-6.3.1/ajax/ajaxdb/Makefile.am 2010-08-02 15:54:56.056144703 -0400
+@@ -13,11 +13,11 @@ CYGWIN_LDAJAXDB = -L../../plplot -L../pc
+ endif
+
+ if !ESYSTEMLIBS
+-EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/zlib
++EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/zlib -I$(top_srcdir)/ajax/pcre
+ endif
+
+
+-INCLUDES = -I$(top_srcdir)/plplot -I$(top_srcdir)/ajax/pcre \
++INCLUDES = -I$(top_srcdir)/plplot \
+ $(EXTRA_INCLUDES) \
+ -I$(top_srcdir)/ajax/core -I$(top_srcdir)/ajax/ensembl
+
+diff -up EMBOSS-6.3.1/ajax/ajaxdb/Makefile.in.system-pcre EMBOSS-6.3.1/ajax/ajaxdb/Makefile.in
+--- EMBOSS-6.3.1/ajax/ajaxdb/Makefile.in.system-pcre 2010-07-19 07:55:40.000000000 -0400
++++ EMBOSS-6.3.1/ajax/ajaxdb/Makefile.in 2010-08-02 15:55:40.350270055 -0400
+@@ -130,8 +130,6 @@ ESYSTEMLIBS = @ESYSTEMLIBS@
+ EXEEXT = @EXEEXT@
+ FGREP = @FGREP@
+ GREP = @GREP@
+-HAVE_MEMMOVE = @HAVE_MEMMOVE@
+-HAVE_STRERROR = @HAVE_STRERROR@
+ INSTALL = @INSTALL@
+ INSTALL_DATA = @INSTALL_DATA@
+ INSTALL_PROGRAM = @INSTALL_PROGRAM@
+@@ -257,8 +255,8 @@ AM_CFLAGS = $(WARN_CFLAGS) $(DEVWARN_CFL
+ @ISCYGWIN_TRUE at CYGWIN_LDAJAXDB = -L../../plplot -L../pcre -L../expat -L../zlib -L../core \
+ @ISCYGWIN_TRUE at -L../ensembl -lensembl lajax -leplplot -leexpat -lepcre -lezlib
+
+- at ESYSTEMLIBS_FALSE@EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/zlib
+-INCLUDES = -I$(top_srcdir)/plplot -I$(top_srcdir)/ajax/pcre \
++ at ESYSTEMLIBS_FALSE@EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/zlib -I$(top_srcdir)/ajax/pcre
++INCLUDES = -I$(top_srcdir)/plplot \
+ $(EXTRA_INCLUDES) \
+ -I$(top_srcdir)/ajax/core -I$(top_srcdir)/ajax/ensembl
+
+@@ -284,9 +282,9 @@ $(srcdir)/Makefile.in: $(srcdir)/Makefi
+ exit 1;; \
+ esac; \
+ done; \
+- echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu ajax/ajaxdb/Makefile'; \
++ echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnits ajax/ajaxdb/Makefile'; \
+ $(am__cd) $(top_srcdir) && \
+- $(AUTOMAKE) --gnu ajax/ajaxdb/Makefile
++ $(AUTOMAKE) --gnits ajax/ajaxdb/Makefile
+ .PRECIOUS: Makefile
+ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+ @case '$?' in \
+diff -up EMBOSS-6.3.1/ajax/core/ajreg.h.system-pcre EMBOSS-6.3.1/ajax/core/ajreg.h
+--- EMBOSS-6.3.1/ajax/core/ajreg.h.system-pcre 2010-04-14 03:44:20.000000000 -0400
++++ EMBOSS-6.3.1/ajax/core/ajreg.h 2010-08-02 15:51:12.877269709 -0400
+@@ -16,9 +16,8 @@ extern "C"
+ #define ajreg_h
+
+ #include "ajax.h"
+-#include "pcre_config.h"
+-#include "pcre_internal.h"
+-#include "pcreposix.h"
++#include <pcre.h>
++#include <pcreposix.h>
+
+ #define AJREG_OVECSIZE 30
+
+@@ -41,7 +40,7 @@ extern "C"
+ ******************************************************************************/
+
+ typedef struct AjSRegexp {
+- real_pcre *pcre;
++ struct real_pcre *pcre;
+ pcre_extra *extra;
+ int *ovector;
+ const char* orig;
+diff -up EMBOSS-6.3.1/ajax/core/Makefile.am.system-pcre EMBOSS-6.3.1/ajax/core/Makefile.am
+--- EMBOSS-6.3.1/ajax/core/Makefile.am.system-pcre 2010-06-16 07:36:00.000000000 -0400
++++ EMBOSS-6.3.1/ajax/core/Makefile.am 2010-08-02 15:56:46.987145446 -0400
+@@ -12,13 +12,13 @@ CYGWIN_LDAJAX = -L../../plplot -L../expa
+ endif
+
+ if !ESYSTEMLIBS
+-EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/zlib
++EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/zlib -I$(top_srcdir)/ajax/pcre
+ endif
+
+
+ INCLUDES = -DAJAX_FIXED_ROOT=$(AJAX_FIXED_ROOT) \
+ -DAJAX_SYSTEM="$(AJAX_SYSTEM)" -DPREFIX=\"$(prefix)\" \
+--I$(top_srcdir)/plplot -I$(top_srcdir)/ajax/pcre $(EXTRA_INCLUDES)
++-I$(top_srcdir)/plplot $(EXTRA_INCLUDES)
+
+ AJAXSRC = ajalign.c ajarr.c ajassert.c \
+ ajbase.c ajcall.c ajcod.c \
+diff -up EMBOSS-6.3.1/ajax/core/Makefile.in.system-pcre EMBOSS-6.3.1/ajax/core/Makefile.in
+--- EMBOSS-6.3.1/ajax/core/Makefile.in.system-pcre 2010-07-19 07:55:40.000000000 -0400
++++ EMBOSS-6.3.1/ajax/core/Makefile.in 2010-08-02 15:57:14.969269966 -0400
+@@ -139,8 +139,6 @@ ESYSTEMLIBS = @ESYSTEMLIBS@
+ EXEEXT = @EXEEXT@
+ FGREP = @FGREP@
+ GREP = @GREP@
+-HAVE_MEMMOVE = @HAVE_MEMMOVE@
+-HAVE_STRERROR = @HAVE_STRERROR@
+ INSTALL = @INSTALL@
+ INSTALL_DATA = @INSTALL_DATA@
+ INSTALL_PROGRAM = @INSTALL_PROGRAM@
+@@ -266,10 +264,10 @@ AM_CFLAGS = $(WARN_CFLAGS) $(DEVWARN_CFL
+ @ISCYGWIN_TRUE at CYGWIN_LDAJAX = -L../../plplot -L../expat -L../pcre -L../zlib \
+ @ISCYGWIN_TRUE at -leplplot -leexpat -lepcre -lezlib
+
+- at ESYSTEMLIBS_FALSE@EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/zlib
++ at ESYSTEMLIBS_FALSE@EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/zlib -I$(top_srcdir)/ajax/pcre
+ INCLUDES = -DAJAX_FIXED_ROOT=$(AJAX_FIXED_ROOT) \
+ -DAJAX_SYSTEM="$(AJAX_SYSTEM)" -DPREFIX=\"$(prefix)\" \
+--I$(top_srcdir)/plplot -I$(top_srcdir)/ajax/pcre $(EXTRA_INCLUDES)
++-I$(top_srcdir)/plplot $(EXTRA_INCLUDES)
+
+ AJAXSRC = ajalign.c ajarr.c ajassert.c \
+ ajbase.c ajcall.c ajcod.c \
+@@ -318,9 +316,9 @@ $(srcdir)/Makefile.in: $(srcdir)/Makefi
+ exit 1;; \
+ esac; \
+ done; \
+- echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu ajax/core/Makefile'; \
++ echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnits ajax/core/Makefile'; \
+ $(am__cd) $(top_srcdir) && \
+- $(AUTOMAKE) --gnu ajax/core/Makefile
++ $(AUTOMAKE) --gnits ajax/core/Makefile
+ .PRECIOUS: Makefile
+ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+ @case '$?' in \
+diff -up EMBOSS-6.3.1/ajax/ensembl/Makefile.am.system-pcre EMBOSS-6.3.1/ajax/ensembl/Makefile.am
+--- EMBOSS-6.3.1/ajax/ensembl/Makefile.am.system-pcre 2010-06-16 07:36:00.000000000 -0400
++++ EMBOSS-6.3.1/ajax/ensembl/Makefile.am 2010-08-02 15:57:44.938305995 -0400
+@@ -10,12 +10,12 @@ CYGWIN_LDENSEMBL = -L../../plplot -L../e
+ endif
+
+ if !ESYSTEMLIBS
+-EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat
++EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/pcre
+ endif
+
+
+ INCLUDES = -I$(top_srcdir)/plplot $(EXTRA_INCLUDES) \
+--I$(top_srcdir)/ajax/pcre -I$(top_srcdir)/ajax/core
++-I$(top_srcdir)/ajax/core
+
+ ENSEMBLSRC = ensanalysis.c ensassembly.c ensassemblyexception.c \
+ ensassemblymapper.c ensattribute.c ensbaseadaptor.c enscache.c \
+diff -up EMBOSS-6.3.1/ajax/ensembl/Makefile.in.system-pcre EMBOSS-6.3.1/ajax/ensembl/Makefile.in
+--- EMBOSS-6.3.1/ajax/ensembl/Makefile.in.system-pcre 2010-07-19 07:55:40.000000000 -0400
++++ EMBOSS-6.3.1/ajax/ensembl/Makefile.in 2010-08-02 15:58:24.860163822 -0400
+@@ -143,8 +143,6 @@ ESYSTEMLIBS = @ESYSTEMLIBS@
+ EXEEXT = @EXEEXT@
+ FGREP = @FGREP@
+ GREP = @GREP@
+-HAVE_MEMMOVE = @HAVE_MEMMOVE@
+-HAVE_STRERROR = @HAVE_STRERROR@
+ INSTALL = @INSTALL@
+ INSTALL_DATA = @INSTALL_DATA@
+ INSTALL_PROGRAM = @INSTALL_PROGRAM@
+@@ -266,9 +264,9 @@ lib_LTLIBRARIES = libensembl.la
+ AM_CFLAGS = $(WARN_CFLAGS) $(DEVWARN_CFLAGS)
+ @ISCYGWIN_TRUE at CYGWIN_LDFLAGS = -no-undefined -Wl,--add-stdcall-alias -Wl,--export-all-symbols -Wl,--enable-auto-import
+ @ISCYGWIN_TRUE at CYGWIN_LDENSEMBL = -L../../plplot -L../expat -L../pcre -L../core -lajax -leplplot -leexpat -lepcre
+- at ESYSTEMLIBS_FALSE@EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat
++ at ESYSTEMLIBS_FALSE@EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/pcre
+ INCLUDES = -I$(top_srcdir)/plplot $(EXTRA_INCLUDES) \
+--I$(top_srcdir)/ajax/pcre -I$(top_srcdir)/ajax/core
++-I$(top_srcdir)/ajax/core
+
+ ENSEMBLSRC = ensanalysis.c ensassembly.c ensassemblyexception.c \
+ ensassemblymapper.c ensattribute.c ensbaseadaptor.c enscache.c \
+@@ -316,9 +314,9 @@ $(srcdir)/Makefile.in: $(srcdir)/Makefi
+ exit 1;; \
+ esac; \
+ done; \
+- echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu ajax/ensembl/Makefile'; \
++ echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnits ajax/ensembl/Makefile'; \
+ $(am__cd) $(top_srcdir) && \
+- $(AUTOMAKE) --gnu ajax/ensembl/Makefile
++ $(AUTOMAKE) --gnits ajax/ensembl/Makefile
+ .PRECIOUS: Makefile
+ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+ @case '$?' in \
+diff -up EMBOSS-6.3.1/ajax/graphics/Makefile.am.system-pcre EMBOSS-6.3.1/ajax/graphics/Makefile.am
+--- EMBOSS-6.3.1/ajax/graphics/Makefile.am.system-pcre 2010-06-16 07:36:00.000000000 -0400
++++ EMBOSS-6.3.1/ajax/graphics/Makefile.am 2010-08-02 15:59:19.049155233 -0400
+@@ -10,11 +10,11 @@ CYGWIN_LDAJAXG = -L../../plplot -L../exp
+ endif
+
+ if !ESYSTEMLIBS
+-EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat
++EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/pcre
+ endif
+
+
+-INCLUDES = -I$(top_srcdir)/plplot -I$(top_srcdir)/ajax/pcre \
++INCLUDES = -I$(top_srcdir)/plplot \
+ $(EXTRA_INCLUDES) -I$(top_srcdir)/ajax/core
+
+ AJAXGSRC = ajgraph.c ajhist.c
+diff -up EMBOSS-6.3.1/ajax/graphics/Makefile.in.system-pcre EMBOSS-6.3.1/ajax/graphics/Makefile.in
+--- EMBOSS-6.3.1/ajax/graphics/Makefile.in.system-pcre 2010-07-19 07:55:40.000000000 -0400
++++ EMBOSS-6.3.1/ajax/graphics/Makefile.in 2010-08-02 15:59:40.355144835 -0400
+@@ -130,8 +130,6 @@ ESYSTEMLIBS = @ESYSTEMLIBS@
+ EXEEXT = @EXEEXT@
+ FGREP = @FGREP@
+ GREP = @GREP@
+-HAVE_MEMMOVE = @HAVE_MEMMOVE@
+-HAVE_STRERROR = @HAVE_STRERROR@
+ INSTALL = @INSTALL@
+ INSTALL_DATA = @INSTALL_DATA@
+ INSTALL_PROGRAM = @INSTALL_PROGRAM@
+@@ -253,8 +251,8 @@ lib_LTLIBRARIES = libajaxg.la
+ AM_CFLAGS = $(WARN_CFLAGS) $(DEVWARN_CFLAGS)
+ @ISCYGWIN_TRUE at CYGWIN_LDFLAGS = -no-undefined -Wl,--add-stdcall-alias -Wl,--export-all-symbols -Wl,--enable-auto-import
+ @ISCYGWIN_TRUE at CYGWIN_LDAJAXG = -L../../plplot -L../expat -L../pcre -L../core -lajax -leplplot -leexpat -lepcre
+- at ESYSTEMLIBS_FALSE@EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat
+-INCLUDES = -I$(top_srcdir)/plplot -I$(top_srcdir)/ajax/pcre \
++ at ESYSTEMLIBS_FALSE@EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/pcre
++INCLUDES = -I$(top_srcdir)/plplot \
+ $(EXTRA_INCLUDES) -I$(top_srcdir)/ajax/core
+
+ AJAXGSRC = ajgraph.c ajhist.c
+@@ -277,9 +275,9 @@ $(srcdir)/Makefile.in: $(srcdir)/Makefi
+ exit 1;; \
+ esac; \
+ done; \
+- echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu ajax/graphics/Makefile'; \
++ echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnits ajax/graphics/Makefile'; \
+ $(am__cd) $(top_srcdir) && \
+- $(AUTOMAKE) --gnu ajax/graphics/Makefile
++ $(AUTOMAKE) --gnits ajax/graphics/Makefile
+ .PRECIOUS: Makefile
+ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+ @case '$?' in \
+diff -up EMBOSS-6.3.1/ajax/Makefile.am.system-pcre EMBOSS-6.3.1/ajax/Makefile.am
+--- EMBOSS-6.3.1/ajax/Makefile.am.system-pcre 2010-06-16 06:26:45.000000000 -0400
++++ EMBOSS-6.3.1/ajax/Makefile.am 2010-08-02 16:00:21.489296489 -0400
+@@ -1,6 +1,6 @@
+ ## Process this file with automake to produce Makefile.in
+ if !ESYSTEMLIBS
+-EXTRA_DIRS = expat zlib
++EXTRA_DIRS = expat zlib pcre
+ endif
+
+-SUBDIRS = pcre $(EXTRA_DIRS) core graphics ensembl ajaxdb acd
++SUBDIRS = $(EXTRA_DIRS) core graphics ensembl ajaxdb acd
+diff -up EMBOSS-6.3.1/ajax/Makefile.in.system-pcre EMBOSS-6.3.1/ajax/Makefile.in
+--- EMBOSS-6.3.1/ajax/Makefile.in.system-pcre 2010-07-19 07:55:40.000000000 -0400
++++ EMBOSS-6.3.1/ajax/Makefile.in 2010-08-02 16:00:52.531270101 -0400
+@@ -121,8 +121,6 @@ ESYSTEMLIBS = @ESYSTEMLIBS@
+ EXEEXT = @EXEEXT@
+ FGREP = @FGREP@
+ GREP = @GREP@
+-HAVE_MEMMOVE = @HAVE_MEMMOVE@
+-HAVE_STRERROR = @HAVE_STRERROR@
+ INSTALL = @INSTALL@
+ INSTALL_DATA = @INSTALL_DATA@
+ INSTALL_PROGRAM = @INSTALL_PROGRAM@
+@@ -240,8 +238,8 @@ target_alias = @target_alias@
+ top_build_prefix = @top_build_prefix@
+ top_builddir = @top_builddir@
+ top_srcdir = @top_srcdir@
+- at ESYSTEMLIBS_FALSE@EXTRA_DIRS = expat zlib
+-SUBDIRS = pcre $(EXTRA_DIRS) core graphics ensembl ajaxdb acd
++ at ESYSTEMLIBS_FALSE@EXTRA_DIRS = expat zlib pcre
++SUBDIRS = $(EXTRA_DIRS) core graphics ensembl ajaxdb acd
+ all: all-recursive
+
+ .SUFFIXES:
+@@ -254,9 +252,9 @@ $(srcdir)/Makefile.in: $(srcdir)/Makefi
+ exit 1;; \
+ esac; \
+ done; \
+- echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu ajax/Makefile'; \
++ echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnits ajax/Makefile'; \
+ $(am__cd) $(top_srcdir) && \
+- $(AUTOMAKE) --gnu ajax/Makefile
++ $(AUTOMAKE) --gnits ajax/Makefile
+ .PRECIOUS: Makefile
+ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+ @case '$?' in \
+diff -up EMBOSS-6.3.1/configure.in.system-pcre EMBOSS-6.3.1/configure.in
+--- EMBOSS-6.3.1/configure.in.system-pcre 2010-07-19 07:45:34.000000000 -0400
++++ EMBOSS-6.3.1/configure.in 2010-08-02 16:23:19.710145317 -0400
+@@ -196,30 +196,6 @@ fi
+ dnl endian test for indexing system
+ AC_C_BIGENDIAN(CPPFLAGS="$CPPFLAGS -DBENDIAN",CPPFLAGS="$CPPFLAGS -DLENDIAN")
+
+-dnl PCRE library definitions - see the MAJOR and MINOR values
+-dnl to see which version's configure.in these lines come from
+-
+-dnl Provide the current PCRE version information. Do not use numbers
+-dnl with leading zeros for the minor version, as they end up in a C
+-dnl macro, and may be treated as octal constants. Stick to single
+-dnl digits for minor numbers less than 10. There are unlikely to be
+-dnl that many releases anyway.
+-
+-PCRE_MAJOR=7
+-PCRE_MINOR=9
+-PCRE_DATE=11-Apr-2009
+-PCRE_VERSION=${PCRE_MAJOR}.${PCRE_MINOR}
+-
+-dnl Default values for miscellaneous macros
+-
+-POSIX_MALLOC_THRESHOLD=-DPOSIX_MALLOC_THRESHOLD=10
+-
+-dnl Provide versioning information for libtool shared libraries that
+-dnl are built by default on Unix systems.
+-
+-PCRE_LIB_VERSION=0:1:0
+-PCRE_POSIXLIB_VERSION=0:0:0
+-
+
+ dnl Define where the EMBOSS package is located
+ AC_SUBST(AJAX_FIXED_ROOT)
+@@ -447,6 +423,7 @@ AC_ARG_ENABLE(systemlibs,
+ AS_HELP_STRING([--enable-systemlibs], [utility for RPM/dpkg bundles]))
+ if test "${enable_systemlibs}" = "yes" ; then
+ have_systemlibs=yes
++ AC_CHECK_LIB(pcre, pcre_compile)
+ fi
+ AM_CONDITIONAL(ESYSTEMLIBS, test "$have_systemlibs" = "yes")
+ AC_SUBST(ESYSTEMLIBS)
+@@ -683,7 +660,7 @@ CHECK_THREADS
+
+
+ AC_OUTPUT([plplot/Makefile plplot/lib/Makefile nucleus/Makefile ajax/Makefile
+-ajax/pcre/Makefile ajax/expat/Makefile ajax/zlib/Makefile ajax/core/Makefile
++ajax/expat/Makefile ajax/zlib/Makefile ajax/core/Makefile
+ ajax/graphics/Makefile ajax/ensembl/Makefile ajax/ajaxdb/Makefile
+ ajax/acd/Makefile
+ emboss/Makefile emboss/acd/Makefile test/Makefile test/data/Makefile
+diff -up EMBOSS-6.3.1/configure.system-pcre EMBOSS-6.3.1/configure
+--- EMBOSS-6.3.1/configure.system-pcre 2010-08-02 16:26:26.125269290 -0400
++++ EMBOSS-6.3.1/configure 2010-08-02 16:23:38.092267468 -0400
+@@ -11891,20 +11891,6 @@ $as_echo "#define AC_APPLE_UNIVERSAL_BUI
+
+
+
+-PCRE_MAJOR=7
+-PCRE_MINOR=9
+-PCRE_DATE=11-Apr-2009
+-PCRE_VERSION=${PCRE_MAJOR}.${PCRE_MINOR}
+-
+-
+-POSIX_MALLOC_THRESHOLD=-DPOSIX_MALLOC_THRESHOLD=10
+-
+-
+-PCRE_LIB_VERSION=0:1:0
+-PCRE_POSIXLIB_VERSION=0:0:0
+-
+-
+-
+ AJAX_FIXED_ROOT="\\\"`pwd`/emboss\\\""
+
+ EMBOSS_TOP=`pwd`
+@@ -14915,6 +14901,51 @@ fi
+
+ if test "${enable_systemlibs}" = "yes" ; then
+ have_systemlibs=yes
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for pcre_compile in -lpcre" >&5
++$as_echo_n "checking for pcre_compile in -lpcre... " >&6; }
++if test "${ac_cv_lib_pcre_pcre_compile+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ ac_check_lib_save_LIBS=$LIBS
++LIBS="-lpcre $LIBS"
++cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++/* Override any GCC internal prototype to avoid an error.
++ Use char because int might match the return type of a GCC
++ builtin and then its argument prototype would still apply. */
++#ifdef __cplusplus
++extern "C"
++#endif
++char pcre_compile ();
++int
++main ()
++{
++return pcre_compile ();
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_link "$LINENO"; then :
++ ac_cv_lib_pcre_pcre_compile=yes
++else
++ ac_cv_lib_pcre_pcre_compile=no
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext conftest.$ac_ext
++LIBS=$ac_check_lib_save_LIBS
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_pcre_pcre_compile" >&5
++$as_echo "$ac_cv_lib_pcre_pcre_compile" >&6; }
++if test "x$ac_cv_lib_pcre_pcre_compile" = x""yes; then :
++ cat >>confdefs.h <<_ACEOF
++#define HAVE_LIBPCRE 1
++_ACEOF
++
++ LIBS="-lpcre $LIBS"
++
++fi
++
+ fi
+ if test "$have_systemlibs" = "yes"; then
+ ESYSTEMLIBS_TRUE=
+@@ -15268,7 +15299,7 @@ fi
+
+
+
+-ac_config_files="$ac_config_files plplot/Makefile plplot/lib/Makefile nucleus/Makefile ajax/Makefile ajax/pcre/Makefile ajax/expat/Makefile ajax/zlib/Makefile ajax/core/Makefile ajax/graphics/Makefile ajax/ensembl/Makefile ajax/ajaxdb/Makefile ajax/acd/Makefile emboss/Makefile emboss/acd/Makefile test/Makefile test/data/Makefile test/embl/Makefile test/genbank/Makefile test/pir/Makefile test/swiss/Makefile test/swnew/Makefile test/testdb/Makefile emboss/data/Makefile emboss/data/AAINDEX/Makefile emboss/data/CODONS/Makefile emboss/data/REBASE/Makefile emboss/data/JASPAR_CORE/Makefile emboss/data/JASPAR_FAM/Makefile emboss/data/JASPAR_PHYLOFACTS/Makefile emboss/data/JASPAR_CNE/Makefile emboss/data/JASPAR_POLII/Makefile emboss/data/JASPAR_SPLICE/Makefile emboss/data/JASPAR_PBM/Makefile emboss/data/JASPAR_PBM_HLH/Makefile emboss/data/JASPAR_PBM_HOMEO/Makefile emboss/data/PRINTS/Makefile emboss/data/PROSITE/Makefile doc/Makefile doc/manuals/Makefile doc/tutorials/Makefile doc/pr
ograms/Makefile doc/programs/html/Makefile doc/programs/text/Makefile jemboss/Makefile jemboss/images/Makefile jemboss/lib/Makefile jemboss/lib/axis/Makefile jemboss/resources/Makefile jemboss/utils/Makefile Makefile"
++ac_config_files="$ac_config_files plplot/Makefile plplot/lib/Makefile nucleus/Makefile ajax/Makefile ajax/expat/Makefile ajax/zlib/Makefile ajax/core/Makefile ajax/graphics/Makefile ajax/ensembl/Makefile ajax/ajaxdb/Makefile ajax/acd/Makefile emboss/Makefile emboss/acd/Makefile test/Makefile test/data/Makefile test/embl/Makefile test/genbank/Makefile test/pir/Makefile test/swiss/Makefile test/swnew/Makefile test/testdb/Makefile emboss/data/Makefile emboss/data/AAINDEX/Makefile emboss/data/CODONS/Makefile emboss/data/REBASE/Makefile emboss/data/JASPAR_CORE/Makefile emboss/data/JASPAR_FAM/Makefile emboss/data/JASPAR_PHYLOFACTS/Makefile emboss/data/JASPAR_CNE/Makefile emboss/data/JASPAR_POLII/Makefile emboss/data/JASPAR_SPLICE/Makefile emboss/data/JASPAR_PBM/Makefile emboss/data/JASPAR_PBM_HLH/Makefile emboss/data/JASPAR_PBM_HOMEO/Makefile emboss/data/PRINTS/Makefile emboss/data/PROSITE/Makefile doc/Makefile doc/manuals/Makefile doc/tutorials/Makefile doc/programs/Makefile doc
/programs/html/Makefile doc/programs/text/Makefile jemboss/Makefile jemboss/images/Makefile jemboss/lib/Makefile jemboss/lib/axis/Makefile jemboss/resources/Makefile jemboss/utils/Makefile Makefile"
+
+ cat >confcache <<\_ACEOF
+ # This file is a shell script that caches the results of configure
+@@ -16326,7 +16357,6 @@ do
+ "plplot/lib/Makefile") CONFIG_FILES="$CONFIG_FILES plplot/lib/Makefile" ;;
+ "nucleus/Makefile") CONFIG_FILES="$CONFIG_FILES nucleus/Makefile" ;;
+ "ajax/Makefile") CONFIG_FILES="$CONFIG_FILES ajax/Makefile" ;;
+- "ajax/pcre/Makefile") CONFIG_FILES="$CONFIG_FILES ajax/pcre/Makefile" ;;
+ "ajax/expat/Makefile") CONFIG_FILES="$CONFIG_FILES ajax/expat/Makefile" ;;
+ "ajax/zlib/Makefile") CONFIG_FILES="$CONFIG_FILES ajax/zlib/Makefile" ;;
+ "ajax/core/Makefile") CONFIG_FILES="$CONFIG_FILES ajax/core/Makefile" ;;
+diff -up EMBOSS-6.3.1/emboss/Makefile.am.system-pcre EMBOSS-6.3.1/emboss/Makefile.am
+--- EMBOSS-6.3.1/emboss/Makefile.am.system-pcre 2010-06-16 06:26:45.000000000 -0400
++++ EMBOSS-6.3.1/emboss/Makefile.am 2010-08-02 16:11:45.469145034 -0400
+@@ -79,10 +79,10 @@ wordcount wordfinder wordmatch wossname
+ yank
+
+ if !ESYSTEMLIBS
+-EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/zlib
++EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/zlib -I$(top_srcdir)/ajax/pcre
+ endif
+
+-INCLUDES = -I$(top_srcdir)/nucleus -I$(top_srcdir)/ajax/pcre \
++INCLUDES = -I$(top_srcdir)/nucleus \
+ $(EXTRA_INCLUDES) \
+ -I$(top_srcdir)/ajax/core -I$(top_srcdir)/ajax/graphics \
+ -I$(top_srcdir)/ajax/ensembl -I$(top_srcdir)/ajax/ajaxdb \
+@@ -319,7 +319,7 @@ testplot_SOURCES = testplot.c
+ treetypedisplay_SOURCES = treetypedisplay.c
+
+ if !ESYSTEMLIBS
+-EXTRA_LDS = ../ajax/zlib/libezlib.la ../ajax/expat/libeexpat.la
++EXTRA_LDS = ../ajax/zlib/libezlib.la ../ajax/expat/libeexpat.la ../ajax/pcre/libepcre.la
+ endif
+
+
+@@ -327,7 +327,7 @@ LDADD = ../nucleus/libnucleus.la ../ajax
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+ $(EXTRA_LDS) \
+- ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ ../plplot/libeplplot.la \
+ $(XLIB)
+
+ pkgdata_DATA = emboss.default.template
+diff -up EMBOSS-6.3.1/emboss/Makefile.in.system-pcre EMBOSS-6.3.1/emboss/Makefile.in
+--- EMBOSS-6.3.1/emboss/Makefile.in.system-pcre 2010-07-19 07:55:41.000000000 -0400
++++ EMBOSS-6.3.1/emboss/Makefile.in 2010-08-02 16:20:31.985155163 -0400
+@@ -136,7 +136,7 @@ am__DEPENDENCIES_1 =
+ aaindexextract_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_abiview_OBJECTS = abiview.$(OBJEXT)
+ abiview_OBJECTS = $(am_abiview_OBJECTS)
+@@ -144,7 +144,7 @@ abiview_LDADD = $(LDADD)
+ abiview_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_acdc_OBJECTS = acdc.$(OBJEXT)
+ acdc_OBJECTS = $(am_acdc_OBJECTS)
+@@ -152,7 +152,7 @@ acdc_LDADD = $(LDADD)
+ acdc_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_acdgalaxy_OBJECTS = acdgalaxy.$(OBJEXT)
+ acdgalaxy_OBJECTS = $(am_acdgalaxy_OBJECTS)
+@@ -160,7 +160,7 @@ acdgalaxy_LDADD = $(LDADD)
+ acdgalaxy_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_acdlog_OBJECTS = acdlog.$(OBJEXT)
+ acdlog_OBJECTS = $(am_acdlog_OBJECTS)
+@@ -168,7 +168,7 @@ acdlog_LDADD = $(LDADD)
+ acdlog_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_acdpretty_OBJECTS = acdpretty.$(OBJEXT)
+ acdpretty_OBJECTS = $(am_acdpretty_OBJECTS)
+@@ -176,7 +176,7 @@ acdpretty_LDADD = $(LDADD)
+ acdpretty_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_acdrelations_OBJECTS = acdrelations.$(OBJEXT)
+ acdrelations_OBJECTS = $(am_acdrelations_OBJECTS)
+@@ -184,7 +184,7 @@ acdrelations_LDADD = $(LDADD)
+ acdrelations_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_acdtable_OBJECTS = acdtable.$(OBJEXT)
+ acdtable_OBJECTS = $(am_acdtable_OBJECTS)
+@@ -192,7 +192,7 @@ acdtable_LDADD = $(LDADD)
+ acdtable_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_acdtrace_OBJECTS = acdtrace.$(OBJEXT)
+ acdtrace_OBJECTS = $(am_acdtrace_OBJECTS)
+@@ -200,7 +200,7 @@ acdtrace_LDADD = $(LDADD)
+ acdtrace_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_acdvalid_OBJECTS = acdvalid.$(OBJEXT)
+ acdvalid_OBJECTS = $(am_acdvalid_OBJECTS)
+@@ -208,7 +208,7 @@ acdvalid_LDADD = $(LDADD)
+ acdvalid_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_acdxsd_OBJECTS = acdxsd.$(OBJEXT)
+ acdxsd_OBJECTS = $(am_acdxsd_OBJECTS)
+@@ -216,7 +216,7 @@ acdxsd_LDADD = $(LDADD)
+ acdxsd_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_ajtest_OBJECTS = ajtest.$(OBJEXT)
+ ajtest_OBJECTS = $(am_ajtest_OBJECTS)
+@@ -224,7 +224,7 @@ ajtest_LDADD = $(LDADD)
+ ajtest_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_aligncopy_OBJECTS = aligncopy.$(OBJEXT)
+ aligncopy_OBJECTS = $(am_aligncopy_OBJECTS)
+@@ -232,7 +232,7 @@ aligncopy_LDADD = $(LDADD)
+ aligncopy_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_aligncopypair_OBJECTS = aligncopypair.$(OBJEXT)
+ aligncopypair_OBJECTS = $(am_aligncopypair_OBJECTS)
+@@ -240,7 +240,7 @@ aligncopypair_LDADD = $(LDADD)
+ aligncopypair_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_antigenic_OBJECTS = antigenic.$(OBJEXT)
+ antigenic_OBJECTS = $(am_antigenic_OBJECTS)
+@@ -248,7 +248,7 @@ antigenic_LDADD = $(LDADD)
+ antigenic_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_backtranambig_OBJECTS = backtranambig.$(OBJEXT)
+ backtranambig_OBJECTS = $(am_backtranambig_OBJECTS)
+@@ -256,7 +256,7 @@ backtranambig_LDADD = $(LDADD)
+ backtranambig_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_backtranseq_OBJECTS = backtranseq.$(OBJEXT)
+ backtranseq_OBJECTS = $(am_backtranseq_OBJECTS)
+@@ -264,7 +264,7 @@ backtranseq_LDADD = $(LDADD)
+ backtranseq_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_banana_OBJECTS = banana.$(OBJEXT)
+ banana_OBJECTS = $(am_banana_OBJECTS)
+@@ -272,7 +272,7 @@ banana_LDADD = $(LDADD)
+ banana_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_biosed_OBJECTS = biosed.$(OBJEXT)
+ biosed_OBJECTS = $(am_biosed_OBJECTS)
+@@ -280,7 +280,7 @@ biosed_LDADD = $(LDADD)
+ biosed_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_btwisted_OBJECTS = btwisted.$(OBJEXT)
+ btwisted_OBJECTS = $(am_btwisted_OBJECTS)
+@@ -288,7 +288,7 @@ btwisted_LDADD = $(LDADD)
+ btwisted_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_cai_OBJECTS = cai.$(OBJEXT)
+ cai_OBJECTS = $(am_cai_OBJECTS)
+@@ -296,7 +296,7 @@ cai_LDADD = $(LDADD)
+ cai_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_chaos_OBJECTS = chaos.$(OBJEXT)
+ chaos_OBJECTS = $(am_chaos_OBJECTS)
+@@ -304,7 +304,7 @@ chaos_LDADD = $(LDADD)
+ chaos_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_charge_OBJECTS = charge.$(OBJEXT)
+ charge_OBJECTS = $(am_charge_OBJECTS)
+@@ -312,7 +312,7 @@ charge_LDADD = $(LDADD)
+ charge_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_checktrans_OBJECTS = checktrans.$(OBJEXT)
+ checktrans_OBJECTS = $(am_checktrans_OBJECTS)
+@@ -320,7 +320,7 @@ checktrans_LDADD = $(LDADD)
+ checktrans_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_chips_OBJECTS = chips.$(OBJEXT)
+ chips_OBJECTS = $(am_chips_OBJECTS)
+@@ -328,7 +328,7 @@ chips_LDADD = $(LDADD)
+ chips_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_cirdna_OBJECTS = cirdna.$(OBJEXT)
+ cirdna_OBJECTS = $(am_cirdna_OBJECTS)
+@@ -336,7 +336,7 @@ cirdna_LDADD = $(LDADD)
+ cirdna_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_codcmp_OBJECTS = codcmp.$(OBJEXT)
+ codcmp_OBJECTS = $(am_codcmp_OBJECTS)
+@@ -344,7 +344,7 @@ codcmp_LDADD = $(LDADD)
+ codcmp_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ codcopy_SOURCES = codcopy.c
+ codcopy_OBJECTS = codcopy.$(OBJEXT)
+@@ -352,7 +352,7 @@ codcopy_LDADD = $(LDADD)
+ codcopy_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_coderet_OBJECTS = coderet.$(OBJEXT)
+ coderet_OBJECTS = $(am_coderet_OBJECTS)
+@@ -360,7 +360,7 @@ coderet_LDADD = $(LDADD)
+ coderet_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_complex_OBJECTS = complex.$(OBJEXT)
+ complex_OBJECTS = $(am_complex_OBJECTS)
+@@ -368,7 +368,7 @@ complex_LDADD = $(LDADD)
+ complex_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_compseq_OBJECTS = compseq.$(OBJEXT)
+ compseq_OBJECTS = $(am_compseq_OBJECTS)
+@@ -376,7 +376,7 @@ compseq_LDADD = $(LDADD)
+ compseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_cons_OBJECTS = cons.$(OBJEXT)
+ cons_OBJECTS = $(am_cons_OBJECTS)
+@@ -384,7 +384,7 @@ cons_LDADD = $(LDADD)
+ cons_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_consambig_OBJECTS = consambig.$(OBJEXT)
+ consambig_OBJECTS = $(am_consambig_OBJECTS)
+@@ -392,7 +392,7 @@ consambig_LDADD = $(LDADD)
+ consambig_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_corbatest_OBJECTS = corbatest.$(OBJEXT)
+ corbatest_OBJECTS = $(am_corbatest_OBJECTS)
+@@ -400,7 +400,7 @@ corbatest_LDADD = $(LDADD)
+ corbatest_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_cpgplot_OBJECTS = cpgplot.$(OBJEXT)
+ cpgplot_OBJECTS = $(am_cpgplot_OBJECTS)
+@@ -408,7 +408,7 @@ cpgplot_LDADD = $(LDADD)
+ cpgplot_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_cpgreport_OBJECTS = cpgreport.$(OBJEXT)
+ cpgreport_OBJECTS = $(am_cpgreport_OBJECTS)
+@@ -416,7 +416,7 @@ cpgreport_LDADD = $(LDADD)
+ cpgreport_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_cusp_OBJECTS = cusp.$(OBJEXT)
+ cusp_OBJECTS = $(am_cusp_OBJECTS)
+@@ -424,7 +424,7 @@ cusp_LDADD = $(LDADD)
+ cusp_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_cutgextract_OBJECTS = cutgextract.$(OBJEXT)
+ cutgextract_OBJECTS = $(am_cutgextract_OBJECTS)
+@@ -432,7 +432,7 @@ cutgextract_LDADD = $(LDADD)
+ cutgextract_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_cutseq_OBJECTS = cutseq.$(OBJEXT)
+ cutseq_OBJECTS = $(am_cutseq_OBJECTS)
+@@ -440,7 +440,7 @@ cutseq_LDADD = $(LDADD)
+ cutseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_dan_OBJECTS = dan.$(OBJEXT)
+ dan_OBJECTS = $(am_dan_OBJECTS)
+@@ -448,7 +448,7 @@ dan_LDADD = $(LDADD)
+ dan_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_dbiblast_OBJECTS = dbiblast.$(OBJEXT)
+ dbiblast_OBJECTS = $(am_dbiblast_OBJECTS)
+@@ -456,7 +456,7 @@ dbiblast_LDADD = $(LDADD)
+ dbiblast_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_dbifasta_OBJECTS = dbifasta.$(OBJEXT)
+ dbifasta_OBJECTS = $(am_dbifasta_OBJECTS)
+@@ -464,7 +464,7 @@ dbifasta_LDADD = $(LDADD)
+ dbifasta_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_dbiflat_OBJECTS = dbiflat.$(OBJEXT)
+ dbiflat_OBJECTS = $(am_dbiflat_OBJECTS)
+@@ -472,7 +472,7 @@ dbiflat_LDADD = $(LDADD)
+ dbiflat_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_dbigcg_OBJECTS = dbigcg.$(OBJEXT)
+ dbigcg_OBJECTS = $(am_dbigcg_OBJECTS)
+@@ -480,7 +480,7 @@ dbigcg_LDADD = $(LDADD)
+ dbigcg_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_dbxfasta_OBJECTS = dbxfasta.$(OBJEXT)
+ dbxfasta_OBJECTS = $(am_dbxfasta_OBJECTS)
+@@ -488,7 +488,7 @@ dbxfasta_LDADD = $(LDADD)
+ dbxfasta_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_dbxflat_OBJECTS = dbxflat.$(OBJEXT)
+ dbxflat_OBJECTS = $(am_dbxflat_OBJECTS)
+@@ -496,7 +496,7 @@ dbxflat_LDADD = $(LDADD)
+ dbxflat_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_dbxgcg_OBJECTS = dbxgcg.$(OBJEXT)
+ dbxgcg_OBJECTS = $(am_dbxgcg_OBJECTS)
+@@ -504,7 +504,7 @@ dbxgcg_LDADD = $(LDADD)
+ dbxgcg_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_degapseq_OBJECTS = degapseq.$(OBJEXT)
+ degapseq_OBJECTS = $(am_degapseq_OBJECTS)
+@@ -512,7 +512,7 @@ degapseq_LDADD = $(LDADD)
+ degapseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_density_OBJECTS = density.$(OBJEXT)
+ density_OBJECTS = $(am_density_OBJECTS)
+@@ -520,7 +520,7 @@ density_LDADD = $(LDADD)
+ density_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_descseq_OBJECTS = descseq.$(OBJEXT)
+ descseq_OBJECTS = $(am_descseq_OBJECTS)
+@@ -528,7 +528,7 @@ descseq_LDADD = $(LDADD)
+ descseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_diffseq_OBJECTS = diffseq.$(OBJEXT)
+ diffseq_OBJECTS = $(am_diffseq_OBJECTS)
+@@ -536,7 +536,7 @@ diffseq_LDADD = $(LDADD)
+ diffseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_digest_OBJECTS = digest.$(OBJEXT)
+ digest_OBJECTS = $(am_digest_OBJECTS)
+@@ -544,7 +544,7 @@ digest_LDADD = $(LDADD)
+ digest_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_distmat_OBJECTS = distmat.$(OBJEXT)
+ distmat_OBJECTS = $(am_distmat_OBJECTS)
+@@ -552,7 +552,7 @@ distmat_LDADD = $(LDADD)
+ distmat_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ domtesta_SOURCES = domtesta.c
+ domtesta_OBJECTS = domtesta.$(OBJEXT)
+@@ -560,7 +560,7 @@ domtesta_LDADD = $(LDADD)
+ domtesta_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ domtestb_SOURCES = domtestb.c
+ domtestb_OBJECTS = domtestb.$(OBJEXT)
+@@ -568,7 +568,7 @@ domtestb_LDADD = $(LDADD)
+ domtestb_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ domtestc_SOURCES = domtestc.c
+ domtestc_OBJECTS = domtestc.$(OBJEXT)
+@@ -576,7 +576,7 @@ domtestc_LDADD = $(LDADD)
+ domtestc_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ domtestd_SOURCES = domtestd.c
+ domtestd_OBJECTS = domtestd.$(OBJEXT)
+@@ -584,7 +584,7 @@ domtestd_LDADD = $(LDADD)
+ domtestd_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_dotmatcher_OBJECTS = dotmatcher.$(OBJEXT)
+ dotmatcher_OBJECTS = $(am_dotmatcher_OBJECTS)
+@@ -592,7 +592,7 @@ dotmatcher_LDADD = $(LDADD)
+ dotmatcher_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_dotpath_OBJECTS = dotpath.$(OBJEXT)
+ dotpath_OBJECTS = $(am_dotpath_OBJECTS)
+@@ -600,7 +600,7 @@ dotpath_LDADD = $(LDADD)
+ dotpath_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_dottup_OBJECTS = dottup.$(OBJEXT)
+ dottup_OBJECTS = $(am_dottup_OBJECTS)
+@@ -608,7 +608,7 @@ dottup_LDADD = $(LDADD)
+ dottup_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_dreg_OBJECTS = dreg.$(OBJEXT)
+ dreg_OBJECTS = $(am_dreg_OBJECTS)
+@@ -616,7 +616,7 @@ dreg_LDADD = $(LDADD)
+ dreg_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_edamclean_OBJECTS = edamclean.$(OBJEXT)
+ edamclean_OBJECTS = $(am_edamclean_OBJECTS)
+@@ -624,7 +624,7 @@ edamclean_LDADD = $(LDADD)
+ edamclean_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_edialign_OBJECTS = edialign.$(OBJEXT)
+ edialign_OBJECTS = $(am_edialign_OBJECTS)
+@@ -632,7 +632,7 @@ edialign_LDADD = $(LDADD)
+ edialign_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_einverted_OBJECTS = einverted.$(OBJEXT)
+ einverted_OBJECTS = $(am_einverted_OBJECTS)
+@@ -640,7 +640,7 @@ einverted_LDADD = $(LDADD)
+ einverted_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_embossdata_OBJECTS = embossdata.$(OBJEXT)
+ embossdata_OBJECTS = $(am_embossdata_OBJECTS)
+@@ -648,7 +648,7 @@ embossdata_LDADD = $(LDADD)
+ embossdata_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_embossversion_OBJECTS = embossversion.$(OBJEXT)
+ embossversion_OBJECTS = $(am_embossversion_OBJECTS)
+@@ -656,7 +656,7 @@ embossversion_LDADD = $(LDADD)
+ embossversion_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_emma_OBJECTS = emma.$(OBJEXT)
+ emma_OBJECTS = $(am_emma_OBJECTS)
+@@ -664,7 +664,7 @@ emma_LDADD = $(LDADD)
+ emma_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_emowse_OBJECTS = emowse.$(OBJEXT)
+ emowse_OBJECTS = $(am_emowse_OBJECTS)
+@@ -672,7 +672,7 @@ emowse_LDADD = $(LDADD)
+ emowse_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_ensembltest_OBJECTS = ensembltest.$(OBJEXT)
+ ensembltest_OBJECTS = $(am_ensembltest_OBJECTS)
+@@ -680,7 +680,7 @@ ensembltest_LDADD = $(LDADD)
+ ensembltest_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_entrails_OBJECTS = entrails.$(OBJEXT)
+ entrails_OBJECTS = $(am_entrails_OBJECTS)
+@@ -688,7 +688,7 @@ entrails_LDADD = $(LDADD)
+ entrails_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_entrailsbook_OBJECTS = entrailsbook.$(OBJEXT)
+ entrailsbook_OBJECTS = $(am_entrailsbook_OBJECTS)
+@@ -696,7 +696,7 @@ entrailsbook_LDADD = $(LDADD)
+ entrailsbook_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_entrailshtml_OBJECTS = entrailshtml.$(OBJEXT)
+ entrailshtml_OBJECTS = $(am_entrailshtml_OBJECTS)
+@@ -704,7 +704,7 @@ entrailshtml_LDADD = $(LDADD)
+ entrailshtml_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_entrailswiki_OBJECTS = entrailswiki.$(OBJEXT)
+ entrailswiki_OBJECTS = $(am_entrailswiki_OBJECTS)
+@@ -712,7 +712,7 @@ entrailswiki_LDADD = $(LDADD)
+ entrailswiki_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_entret_OBJECTS = entret.$(OBJEXT)
+ entret_OBJECTS = $(am_entret_OBJECTS)
+@@ -720,7 +720,7 @@ entret_LDADD = $(LDADD)
+ entret_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_epestfind_OBJECTS = epestfind.$(OBJEXT)
+ epestfind_OBJECTS = $(am_epestfind_OBJECTS)
+@@ -728,7 +728,7 @@ epestfind_LDADD = $(LDADD)
+ epestfind_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_eprimer3_OBJECTS = eprimer3.$(OBJEXT)
+ eprimer3_OBJECTS = $(am_eprimer3_OBJECTS)
+@@ -736,7 +736,7 @@ eprimer3_LDADD = $(LDADD)
+ eprimer3_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_equicktandem_OBJECTS = equicktandem.$(OBJEXT)
+ equicktandem_OBJECTS = $(am_equicktandem_OBJECTS)
+@@ -744,7 +744,7 @@ equicktandem_LDADD = $(LDADD)
+ equicktandem_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_est2genome_OBJECTS = est2genome.$(OBJEXT)
+ est2genome_OBJECTS = $(am_est2genome_OBJECTS)
+@@ -752,7 +752,7 @@ est2genome_LDADD = $(LDADD)
+ est2genome_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_etandem_OBJECTS = etandem.$(OBJEXT)
+ etandem_OBJECTS = $(am_etandem_OBJECTS)
+@@ -760,7 +760,7 @@ etandem_LDADD = $(LDADD)
+ etandem_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_extractalign_OBJECTS = extractalign.$(OBJEXT)
+ extractalign_OBJECTS = $(am_extractalign_OBJECTS)
+@@ -768,7 +768,7 @@ extractalign_LDADD = $(LDADD)
+ extractalign_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_extractfeat_OBJECTS = extractfeat.$(OBJEXT)
+ extractfeat_OBJECTS = $(am_extractfeat_OBJECTS)
+@@ -776,7 +776,7 @@ extractfeat_LDADD = $(LDADD)
+ extractfeat_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_extractseq_OBJECTS = extractseq.$(OBJEXT)
+ extractseq_OBJECTS = $(am_extractseq_OBJECTS)
+@@ -784,7 +784,7 @@ extractseq_LDADD = $(LDADD)
+ extractseq_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_featcopy_OBJECTS = featcopy.$(OBJEXT)
+ featcopy_OBJECTS = $(am_featcopy_OBJECTS)
+@@ -792,7 +792,7 @@ featcopy_LDADD = $(LDADD)
+ featcopy_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_featreport_OBJECTS = featreport.$(OBJEXT)
+ featreport_OBJECTS = $(am_featreport_OBJECTS)
+@@ -800,7 +800,7 @@ featreport_LDADD = $(LDADD)
+ featreport_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_findkm_OBJECTS = findkm.$(OBJEXT)
+ findkm_OBJECTS = $(am_findkm_OBJECTS)
+@@ -808,7 +808,7 @@ findkm_LDADD = $(LDADD)
+ findkm_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_freak_OBJECTS = freak.$(OBJEXT)
+ freak_OBJECTS = $(am_freak_OBJECTS)
+@@ -816,7 +816,7 @@ freak_LDADD = $(LDADD)
+ freak_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_fuzznuc_OBJECTS = fuzznuc.$(OBJEXT)
+ fuzznuc_OBJECTS = $(am_fuzznuc_OBJECTS)
+@@ -824,7 +824,7 @@ fuzznuc_LDADD = $(LDADD)
+ fuzznuc_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_fuzzpro_OBJECTS = fuzzpro.$(OBJEXT)
+ fuzzpro_OBJECTS = $(am_fuzzpro_OBJECTS)
+@@ -832,7 +832,7 @@ fuzzpro_LDADD = $(LDADD)
+ fuzzpro_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_fuzztran_OBJECTS = fuzztran.$(OBJEXT)
+ fuzztran_OBJECTS = $(am_fuzztran_OBJECTS)
+@@ -840,7 +840,7 @@ fuzztran_LDADD = $(LDADD)
+ fuzztran_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_garnier_OBJECTS = garnier.$(OBJEXT)
+ garnier_OBJECTS = $(am_garnier_OBJECTS)
+@@ -848,7 +848,7 @@ garnier_LDADD = $(LDADD)
+ garnier_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_geecee_OBJECTS = geecee.$(OBJEXT)
+ geecee_OBJECTS = $(am_geecee_OBJECTS)
+@@ -856,7 +856,7 @@ geecee_LDADD = $(LDADD)
+ geecee_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_getorf_OBJECTS = getorf.$(OBJEXT)
+ getorf_OBJECTS = $(am_getorf_OBJECTS)
+@@ -864,7 +864,7 @@ getorf_LDADD = $(LDADD)
+ getorf_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_helixturnhelix_OBJECTS = helixturnhelix.$(OBJEXT)
+ helixturnhelix_OBJECTS = $(am_helixturnhelix_OBJECTS)
+@@ -872,7 +872,7 @@ helixturnhelix_LDADD = $(LDADD)
+ helixturnhelix_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_histogramtest_OBJECTS = histogramtest.$(OBJEXT)
+ histogramtest_OBJECTS = $(am_histogramtest_OBJECTS)
+@@ -880,7 +880,7 @@ histogramtest_LDADD = $(LDADD)
+ histogramtest_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_hmoment_OBJECTS = hmoment.$(OBJEXT)
+ hmoment_OBJECTS = $(am_hmoment_OBJECTS)
+@@ -888,7 +888,7 @@ hmoment_LDADD = $(LDADD)
+ hmoment_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_iep_OBJECTS = iep.$(OBJEXT)
+ iep_OBJECTS = $(am_iep_OBJECTS)
+@@ -896,7 +896,7 @@ iep_LDADD = $(LDADD)
+ iep_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_infoalign_OBJECTS = infoalign.$(OBJEXT)
+ infoalign_OBJECTS = $(am_infoalign_OBJECTS)
+@@ -904,7 +904,7 @@ infoalign_LDADD = $(LDADD)
+ infoalign_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_infobase_OBJECTS = infobase.$(OBJEXT)
+ infobase_OBJECTS = $(am_infobase_OBJECTS)
+@@ -912,7 +912,7 @@ infobase_LDADD = $(LDADD)
+ infobase_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_inforesidue_OBJECTS = inforesidue.$(OBJEXT)
+ inforesidue_OBJECTS = $(am_inforesidue_OBJECTS)
+@@ -920,7 +920,7 @@ inforesidue_LDADD = $(LDADD)
+ inforesidue_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_infoseq_OBJECTS = infoseq.$(OBJEXT)
+ infoseq_OBJECTS = $(am_infoseq_OBJECTS)
+@@ -928,7 +928,7 @@ infoseq_LDADD = $(LDADD)
+ infoseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_intconv_OBJECTS = intconv.$(OBJEXT)
+ intconv_OBJECTS = $(am_intconv_OBJECTS)
+@@ -936,7 +936,7 @@ intconv_LDADD = $(LDADD)
+ intconv_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_isochore_OBJECTS = isochore.$(OBJEXT)
+ isochore_OBJECTS = $(am_isochore_OBJECTS)
+@@ -944,7 +944,7 @@ isochore_LDADD = $(LDADD)
+ isochore_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_jaspextract_OBJECTS = jaspextract.$(OBJEXT)
+ jaspextract_OBJECTS = $(am_jaspextract_OBJECTS)
+@@ -952,7 +952,7 @@ jaspextract_LDADD = $(LDADD)
+ jaspextract_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_jaspscan_OBJECTS = jaspscan.$(OBJEXT)
+ jaspscan_OBJECTS = $(am_jaspscan_OBJECTS)
+@@ -960,7 +960,7 @@ jaspscan_LDADD = $(LDADD)
+ jaspscan_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_jembossctl_OBJECTS = jembossctl.$(OBJEXT)
+ jembossctl_OBJECTS = $(am_jembossctl_OBJECTS)
+@@ -968,7 +968,7 @@ jembossctl_LDADD = $(LDADD)
+ jembossctl_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_lindna_OBJECTS = lindna.$(OBJEXT)
+ lindna_OBJECTS = $(am_lindna_OBJECTS)
+@@ -976,7 +976,7 @@ lindna_LDADD = $(LDADD)
+ lindna_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_listor_OBJECTS = listor.$(OBJEXT)
+ listor_OBJECTS = $(am_listor_OBJECTS)
+@@ -984,7 +984,7 @@ listor_LDADD = $(LDADD)
+ listor_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ makenucseq_SOURCES = makenucseq.c
+ makenucseq_OBJECTS = makenucseq.$(OBJEXT)
+@@ -992,7 +992,7 @@ makenucseq_LDADD = $(LDADD)
+ makenucseq_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ makeprotseq_SOURCES = makeprotseq.c
+ makeprotseq_OBJECTS = makeprotseq.$(OBJEXT)
+@@ -1000,7 +1000,7 @@ makeprotseq_LDADD = $(LDADD)
+ makeprotseq_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_marscan_OBJECTS = marscan.$(OBJEXT)
+ marscan_OBJECTS = $(am_marscan_OBJECTS)
+@@ -1008,7 +1008,7 @@ marscan_LDADD = $(LDADD)
+ marscan_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_martattributes_OBJECTS = martattributes.$(OBJEXT)
+ martattributes_OBJECTS = $(am_martattributes_OBJECTS)
+@@ -1016,7 +1016,7 @@ martattributes_LDADD = $(LDADD)
+ martattributes_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_martdatasets_OBJECTS = martdatasets.$(OBJEXT)
+ martdatasets_OBJECTS = $(am_martdatasets_OBJECTS)
+@@ -1024,7 +1024,7 @@ martdatasets_LDADD = $(LDADD)
+ martdatasets_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_martfilters_OBJECTS = martfilters.$(OBJEXT)
+ martfilters_OBJECTS = $(am_martfilters_OBJECTS)
+@@ -1032,7 +1032,7 @@ martfilters_LDADD = $(LDADD)
+ martfilters_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_martquery_OBJECTS = martquery.$(OBJEXT)
+ martquery_OBJECTS = $(am_martquery_OBJECTS)
+@@ -1040,7 +1040,7 @@ martquery_LDADD = $(LDADD)
+ martquery_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_martregistry_OBJECTS = martregistry.$(OBJEXT)
+ martregistry_OBJECTS = $(am_martregistry_OBJECTS)
+@@ -1048,7 +1048,7 @@ martregistry_LDADD = $(LDADD)
+ martregistry_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_martseqs_OBJECTS = martseqs.$(OBJEXT)
+ martseqs_OBJECTS = $(am_martseqs_OBJECTS)
+@@ -1056,7 +1056,7 @@ martseqs_LDADD = $(LDADD)
+ martseqs_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_maskambignuc_OBJECTS = maskambignuc.$(OBJEXT)
+ maskambignuc_OBJECTS = $(am_maskambignuc_OBJECTS)
+@@ -1064,7 +1064,7 @@ maskambignuc_LDADD = $(LDADD)
+ maskambignuc_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_maskambigprot_OBJECTS = maskambigprot.$(OBJEXT)
+ maskambigprot_OBJECTS = $(am_maskambigprot_OBJECTS)
+@@ -1072,7 +1072,7 @@ maskambigprot_LDADD = $(LDADD)
+ maskambigprot_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_maskfeat_OBJECTS = maskfeat.$(OBJEXT)
+ maskfeat_OBJECTS = $(am_maskfeat_OBJECTS)
+@@ -1080,7 +1080,7 @@ maskfeat_LDADD = $(LDADD)
+ maskfeat_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_maskseq_OBJECTS = maskseq.$(OBJEXT)
+ maskseq_OBJECTS = $(am_maskseq_OBJECTS)
+@@ -1088,7 +1088,7 @@ maskseq_LDADD = $(LDADD)
+ maskseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_matcher_OBJECTS = matcher.$(OBJEXT)
+ matcher_OBJECTS = $(am_matcher_OBJECTS)
+@@ -1096,7 +1096,7 @@ matcher_LDADD = $(LDADD)
+ matcher_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_megamerger_OBJECTS = megamerger.$(OBJEXT)
+ megamerger_OBJECTS = $(am_megamerger_OBJECTS)
+@@ -1104,7 +1104,7 @@ megamerger_LDADD = $(LDADD)
+ megamerger_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_merger_OBJECTS = merger.$(OBJEXT)
+ merger_OBJECTS = $(am_merger_OBJECTS)
+@@ -1112,7 +1112,7 @@ merger_LDADD = $(LDADD)
+ merger_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_msbar_OBJECTS = msbar.$(OBJEXT)
+ msbar_OBJECTS = $(am_msbar_OBJECTS)
+@@ -1120,7 +1120,7 @@ msbar_LDADD = $(LDADD)
+ msbar_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_mwcontam_OBJECTS = mwcontam.$(OBJEXT)
+ mwcontam_OBJECTS = $(am_mwcontam_OBJECTS)
+@@ -1128,7 +1128,7 @@ mwcontam_LDADD = $(LDADD)
+ mwcontam_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_mwfilter_OBJECTS = mwfilter.$(OBJEXT)
+ mwfilter_OBJECTS = $(am_mwfilter_OBJECTS)
+@@ -1136,7 +1136,7 @@ mwfilter_LDADD = $(LDADD)
+ mwfilter_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_needle_OBJECTS = needle.$(OBJEXT)
+ needle_OBJECTS = $(am_needle_OBJECTS)
+@@ -1144,7 +1144,7 @@ needle_LDADD = $(LDADD)
+ needle_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_needleall_OBJECTS = needleall.$(OBJEXT)
+ needleall_OBJECTS = $(am_needleall_OBJECTS)
+@@ -1152,7 +1152,7 @@ needleall_LDADD = $(LDADD)
+ needleall_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_newcoils_OBJECTS = newcoils.$(OBJEXT)
+ newcoils_OBJECTS = $(am_newcoils_OBJECTS)
+@@ -1160,7 +1160,7 @@ newcoils_LDADD = $(LDADD)
+ newcoils_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_newcpgreport_OBJECTS = newcpgreport.$(OBJEXT)
+ newcpgreport_OBJECTS = $(am_newcpgreport_OBJECTS)
+@@ -1168,7 +1168,7 @@ newcpgreport_LDADD = $(LDADD)
+ newcpgreport_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_newcpgseek_OBJECTS = newcpgseek.$(OBJEXT)
+ newcpgseek_OBJECTS = $(am_newcpgseek_OBJECTS)
+@@ -1176,7 +1176,7 @@ newcpgseek_LDADD = $(LDADD)
+ newcpgseek_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_newseq_OBJECTS = newseq.$(OBJEXT)
+ newseq_OBJECTS = $(am_newseq_OBJECTS)
+@@ -1184,7 +1184,7 @@ newseq_LDADD = $(LDADD)
+ newseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_nohtml_OBJECTS = nohtml.$(OBJEXT)
+ nohtml_OBJECTS = $(am_nohtml_OBJECTS)
+@@ -1192,7 +1192,7 @@ nohtml_LDADD = $(LDADD)
+ nohtml_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_noreturn_OBJECTS = noreturn.$(OBJEXT)
+ noreturn_OBJECTS = $(am_noreturn_OBJECTS)
+@@ -1200,7 +1200,7 @@ noreturn_LDADD = $(LDADD)
+ noreturn_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_nospace_OBJECTS = nospace.$(OBJEXT)
+ nospace_OBJECTS = $(am_nospace_OBJECTS)
+@@ -1208,7 +1208,7 @@ nospace_LDADD = $(LDADD)
+ nospace_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_notab_OBJECTS = notab.$(OBJEXT)
+ notab_OBJECTS = $(am_notab_OBJECTS)
+@@ -1216,7 +1216,7 @@ notab_LDADD = $(LDADD)
+ notab_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_notseq_OBJECTS = notseq.$(OBJEXT)
+ notseq_OBJECTS = $(am_notseq_OBJECTS)
+@@ -1224,7 +1224,7 @@ notseq_LDADD = $(LDADD)
+ notseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_nthseq_OBJECTS = nthseq.$(OBJEXT)
+ nthseq_OBJECTS = $(am_nthseq_OBJECTS)
+@@ -1232,7 +1232,7 @@ nthseq_LDADD = $(LDADD)
+ nthseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_nthseqset_OBJECTS = nthseqset.$(OBJEXT)
+ nthseqset_OBJECTS = $(am_nthseqset_OBJECTS)
+@@ -1240,7 +1240,7 @@ nthseqset_LDADD = $(LDADD)
+ nthseqset_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_octanol_OBJECTS = octanol.$(OBJEXT)
+ octanol_OBJECTS = $(am_octanol_OBJECTS)
+@@ -1248,7 +1248,7 @@ octanol_LDADD = $(LDADD)
+ octanol_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_oddcomp_OBJECTS = oddcomp.$(OBJEXT)
+ oddcomp_OBJECTS = $(am_oddcomp_OBJECTS)
+@@ -1256,7 +1256,7 @@ oddcomp_LDADD = $(LDADD)
+ oddcomp_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_origsplitter_OBJECTS = origsplitter.$(OBJEXT)
+ origsplitter_OBJECTS = $(am_origsplitter_OBJECTS)
+@@ -1264,7 +1264,7 @@ origsplitter_LDADD = $(LDADD)
+ origsplitter_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_origunion_OBJECTS = origunion.$(OBJEXT)
+ origunion_OBJECTS = $(am_origunion_OBJECTS)
+@@ -1272,7 +1272,7 @@ origunion_LDADD = $(LDADD)
+ origunion_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_palindrome_OBJECTS = palindrome.$(OBJEXT)
+ palindrome_OBJECTS = $(am_palindrome_OBJECTS)
+@@ -1280,7 +1280,7 @@ palindrome_LDADD = $(LDADD)
+ palindrome_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_pasteseq_OBJECTS = pasteseq.$(OBJEXT)
+ pasteseq_OBJECTS = $(am_pasteseq_OBJECTS)
+@@ -1288,7 +1288,7 @@ pasteseq_LDADD = $(LDADD)
+ pasteseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_patmatdb_OBJECTS = patmatdb.$(OBJEXT)
+ patmatdb_OBJECTS = $(am_patmatdb_OBJECTS)
+@@ -1296,7 +1296,7 @@ patmatdb_LDADD = $(LDADD)
+ patmatdb_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_patmatmotifs_OBJECTS = patmatmotifs.$(OBJEXT)
+ patmatmotifs_OBJECTS = $(am_patmatmotifs_OBJECTS)
+@@ -1304,7 +1304,7 @@ patmatmotifs_LDADD = $(LDADD)
+ patmatmotifs_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_patmattest_OBJECTS = patmattest.$(OBJEXT)
+ patmattest_OBJECTS = $(am_patmattest_OBJECTS)
+@@ -1312,7 +1312,7 @@ patmattest_LDADD = $(LDADD)
+ patmattest_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_pepcoil_OBJECTS = pepcoil.$(OBJEXT)
+ pepcoil_OBJECTS = $(am_pepcoil_OBJECTS)
+@@ -1320,7 +1320,7 @@ pepcoil_LDADD = $(LDADD)
+ pepcoil_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_pepinfo_OBJECTS = pepinfo.$(OBJEXT)
+ pepinfo_OBJECTS = $(am_pepinfo_OBJECTS)
+@@ -1328,7 +1328,7 @@ pepinfo_LDADD = $(LDADD)
+ pepinfo_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_pepnet_OBJECTS = pepnet.$(OBJEXT)
+ pepnet_OBJECTS = $(am_pepnet_OBJECTS)
+@@ -1336,7 +1336,7 @@ pepnet_LDADD = $(LDADD)
+ pepnet_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_pepstats_OBJECTS = pepstats.$(OBJEXT)
+ pepstats_OBJECTS = $(am_pepstats_OBJECTS)
+@@ -1344,7 +1344,7 @@ pepstats_LDADD = $(LDADD)
+ pepstats_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_pepwheel_OBJECTS = pepwheel.$(OBJEXT)
+ pepwheel_OBJECTS = $(am_pepwheel_OBJECTS)
+@@ -1352,7 +1352,7 @@ pepwheel_LDADD = $(LDADD)
+ pepwheel_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_pepwindow_OBJECTS = pepwindow.$(OBJEXT)
+ pepwindow_OBJECTS = $(am_pepwindow_OBJECTS)
+@@ -1360,7 +1360,7 @@ pepwindow_LDADD = $(LDADD)
+ pepwindow_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_pepwindowall_OBJECTS = pepwindowall.$(OBJEXT)
+ pepwindowall_OBJECTS = $(am_pepwindowall_OBJECTS)
+@@ -1368,7 +1368,7 @@ pepwindowall_LDADD = $(LDADD)
+ pepwindowall_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_plotcon_OBJECTS = plotcon.$(OBJEXT)
+ plotcon_OBJECTS = $(am_plotcon_OBJECTS)
+@@ -1376,7 +1376,7 @@ plotcon_LDADD = $(LDADD)
+ plotcon_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_plotorf_OBJECTS = plotorf.$(OBJEXT)
+ plotorf_OBJECTS = $(am_plotorf_OBJECTS)
+@@ -1384,7 +1384,7 @@ plotorf_LDADD = $(LDADD)
+ plotorf_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_polydot_OBJECTS = polydot.$(OBJEXT)
+ polydot_OBJECTS = $(am_polydot_OBJECTS)
+@@ -1392,7 +1392,7 @@ polydot_LDADD = $(LDADD)
+ polydot_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_preg_OBJECTS = preg.$(OBJEXT)
+ preg_OBJECTS = $(am_preg_OBJECTS)
+@@ -1400,7 +1400,7 @@ preg_LDADD = $(LDADD)
+ preg_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_prettyplot_OBJECTS = prettyplot.$(OBJEXT)
+ prettyplot_OBJECTS = $(am_prettyplot_OBJECTS)
+@@ -1408,7 +1408,7 @@ prettyplot_LDADD = $(LDADD)
+ prettyplot_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_prettyseq_OBJECTS = prettyseq.$(OBJEXT)
+ prettyseq_OBJECTS = $(am_prettyseq_OBJECTS)
+@@ -1416,7 +1416,7 @@ prettyseq_LDADD = $(LDADD)
+ prettyseq_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_prima_OBJECTS = prima.$(OBJEXT)
+ prima_OBJECTS = $(am_prima_OBJECTS)
+@@ -1424,7 +1424,7 @@ prima_LDADD = $(LDADD)
+ prima_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_primers_OBJECTS = primers.$(OBJEXT)
+ primers_OBJECTS = $(am_primers_OBJECTS)
+@@ -1432,7 +1432,7 @@ primers_LDADD = $(LDADD)
+ primers_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_primersearch_OBJECTS = primersearch.$(OBJEXT)
+ primersearch_OBJECTS = $(am_primersearch_OBJECTS)
+@@ -1440,7 +1440,7 @@ primersearch_LDADD = $(LDADD)
+ primersearch_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_printsextract_OBJECTS = printsextract.$(OBJEXT)
+ printsextract_OBJECTS = $(am_printsextract_OBJECTS)
+@@ -1448,7 +1448,7 @@ printsextract_LDADD = $(LDADD)
+ printsextract_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_profit_OBJECTS = profit.$(OBJEXT)
+ profit_OBJECTS = $(am_profit_OBJECTS)
+@@ -1456,7 +1456,7 @@ profit_LDADD = $(LDADD)
+ profit_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_prophecy_OBJECTS = prophecy.$(OBJEXT)
+ prophecy_OBJECTS = $(am_prophecy_OBJECTS)
+@@ -1464,7 +1464,7 @@ prophecy_LDADD = $(LDADD)
+ prophecy_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_prophet_OBJECTS = prophet.$(OBJEXT)
+ prophet_OBJECTS = $(am_prophet_OBJECTS)
+@@ -1472,7 +1472,7 @@ prophet_LDADD = $(LDADD)
+ prophet_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_prosextract_OBJECTS = prosextract.$(OBJEXT)
+ prosextract_OBJECTS = $(am_prosextract_OBJECTS)
+@@ -1480,7 +1480,7 @@ prosextract_LDADD = $(LDADD)
+ prosextract_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_pscan_OBJECTS = pscan.$(OBJEXT)
+ pscan_OBJECTS = $(am_pscan_OBJECTS)
+@@ -1488,7 +1488,7 @@ pscan_LDADD = $(LDADD)
+ pscan_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_psiphi_OBJECTS = psiphi.$(OBJEXT)
+ psiphi_OBJECTS = $(am_psiphi_OBJECTS)
+@@ -1496,7 +1496,7 @@ psiphi_LDADD = $(LDADD)
+ psiphi_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_rebaseextract_OBJECTS = rebaseextract.$(OBJEXT)
+ rebaseextract_OBJECTS = $(am_rebaseextract_OBJECTS)
+@@ -1504,7 +1504,7 @@ rebaseextract_LDADD = $(LDADD)
+ rebaseextract_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_recoder_OBJECTS = recoder.$(OBJEXT)
+ recoder_OBJECTS = $(am_recoder_OBJECTS)
+@@ -1512,7 +1512,7 @@ recoder_LDADD = $(LDADD)
+ recoder_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_redata_OBJECTS = redata.$(OBJEXT)
+ redata_OBJECTS = $(am_redata_OBJECTS)
+@@ -1520,7 +1520,7 @@ redata_LDADD = $(LDADD)
+ redata_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_remap_OBJECTS = remap.$(OBJEXT)
+ remap_OBJECTS = $(am_remap_OBJECTS)
+@@ -1528,7 +1528,7 @@ remap_LDADD = $(LDADD)
+ remap_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_restover_OBJECTS = restover.$(OBJEXT)
+ restover_OBJECTS = $(am_restover_OBJECTS)
+@@ -1536,7 +1536,7 @@ restover_LDADD = $(LDADD)
+ restover_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_restrict_OBJECTS = restrict.$(OBJEXT)
+ restrict_OBJECTS = $(am_restrict_OBJECTS)
+@@ -1544,7 +1544,7 @@ restrict_LDADD = $(LDADD)
+ restrict_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_revseq_OBJECTS = revseq.$(OBJEXT)
+ revseq_OBJECTS = $(am_revseq_OBJECTS)
+@@ -1552,7 +1552,7 @@ revseq_LDADD = $(LDADD)
+ revseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_seealso_OBJECTS = seealso.$(OBJEXT)
+ seealso_OBJECTS = $(am_seealso_OBJECTS)
+@@ -1560,7 +1560,7 @@ seealso_LDADD = $(LDADD)
+ seealso_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_seqinfo_OBJECTS = seqinfo.$(OBJEXT)
+ seqinfo_OBJECTS = $(am_seqinfo_OBJECTS)
+@@ -1568,7 +1568,7 @@ seqinfo_LDADD = $(LDADD)
+ seqinfo_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_seqmatchall_OBJECTS = seqmatchall.$(OBJEXT)
+ seqmatchall_OBJECTS = $(am_seqmatchall_OBJECTS)
+@@ -1576,7 +1576,7 @@ seqmatchall_LDADD = $(LDADD)
+ seqmatchall_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_seqret_OBJECTS = seqret.$(OBJEXT)
+ seqret_OBJECTS = $(am_seqret_OBJECTS)
+@@ -1584,7 +1584,7 @@ seqret_LDADD = $(LDADD)
+ seqret_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_seqretall_OBJECTS = seqretall.$(OBJEXT)
+ seqretall_OBJECTS = $(am_seqretall_OBJECTS)
+@@ -1592,7 +1592,7 @@ seqretall_LDADD = $(LDADD)
+ seqretall_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_seqretallfeat_OBJECTS = seqretallfeat.$(OBJEXT)
+ seqretallfeat_OBJECTS = $(am_seqretallfeat_OBJECTS)
+@@ -1600,7 +1600,7 @@ seqretallfeat_LDADD = $(LDADD)
+ seqretallfeat_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_seqretset_OBJECTS = seqretset.$(OBJEXT)
+ seqretset_OBJECTS = $(am_seqretset_OBJECTS)
+@@ -1608,7 +1608,7 @@ seqretset_LDADD = $(LDADD)
+ seqretset_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_seqretsetall_OBJECTS = seqretsetall.$(OBJEXT)
+ seqretsetall_OBJECTS = $(am_seqretsetall_OBJECTS)
+@@ -1616,7 +1616,7 @@ seqretsetall_LDADD = $(LDADD)
+ seqretsetall_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_seqretsingle_OBJECTS = seqretsingle.$(OBJEXT)
+ seqretsingle_OBJECTS = $(am_seqretsingle_OBJECTS)
+@@ -1624,7 +1624,7 @@ seqretsingle_LDADD = $(LDADD)
+ seqretsingle_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_seqretsplit_OBJECTS = seqretsplit.$(OBJEXT)
+ seqretsplit_OBJECTS = $(am_seqretsplit_OBJECTS)
+@@ -1632,7 +1632,7 @@ seqretsplit_LDADD = $(LDADD)
+ seqretsplit_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_seqrettype_OBJECTS = seqrettype.$(OBJEXT)
+ seqrettype_OBJECTS = $(am_seqrettype_OBJECTS)
+@@ -1640,7 +1640,7 @@ seqrettype_LDADD = $(LDADD)
+ seqrettype_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_showalign_OBJECTS = showalign.$(OBJEXT)
+ showalign_OBJECTS = $(am_showalign_OBJECTS)
+@@ -1648,7 +1648,7 @@ showalign_LDADD = $(LDADD)
+ showalign_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_showdb_OBJECTS = showdb.$(OBJEXT)
+ showdb_OBJECTS = $(am_showdb_OBJECTS)
+@@ -1656,7 +1656,7 @@ showdb_LDADD = $(LDADD)
+ showdb_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_showfeat_OBJECTS = showfeat.$(OBJEXT)
+ showfeat_OBJECTS = $(am_showfeat_OBJECTS)
+@@ -1664,7 +1664,7 @@ showfeat_LDADD = $(LDADD)
+ showfeat_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_showorf_OBJECTS = showorf.$(OBJEXT)
+ showorf_OBJECTS = $(am_showorf_OBJECTS)
+@@ -1672,7 +1672,7 @@ showorf_LDADD = $(LDADD)
+ showorf_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_showpep_OBJECTS = showpep.$(OBJEXT)
+ showpep_OBJECTS = $(am_showpep_OBJECTS)
+@@ -1680,7 +1680,7 @@ showpep_LDADD = $(LDADD)
+ showpep_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_showseq_OBJECTS = showseq.$(OBJEXT)
+ showseq_OBJECTS = $(am_showseq_OBJECTS)
+@@ -1688,7 +1688,7 @@ showseq_LDADD = $(LDADD)
+ showseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_shuffleseq_OBJECTS = shuffleseq.$(OBJEXT)
+ shuffleseq_OBJECTS = $(am_shuffleseq_OBJECTS)
+@@ -1696,7 +1696,7 @@ shuffleseq_LDADD = $(LDADD)
+ shuffleseq_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_sigcleave_OBJECTS = sigcleave.$(OBJEXT)
+ sigcleave_OBJECTS = $(am_sigcleave_OBJECTS)
+@@ -1704,7 +1704,7 @@ sigcleave_LDADD = $(LDADD)
+ sigcleave_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_silent_OBJECTS = silent.$(OBJEXT)
+ silent_OBJECTS = $(am_silent_OBJECTS)
+@@ -1712,7 +1712,7 @@ silent_LDADD = $(LDADD)
+ silent_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_sirna_OBJECTS = sirna.$(OBJEXT)
+ sirna_OBJECTS = $(am_sirna_OBJECTS)
+@@ -1720,7 +1720,7 @@ sirna_LDADD = $(LDADD)
+ sirna_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_sixpack_OBJECTS = sixpack.$(OBJEXT)
+ sixpack_OBJECTS = $(am_sixpack_OBJECTS)
+@@ -1728,7 +1728,7 @@ sixpack_LDADD = $(LDADD)
+ sixpack_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_sizeseq_OBJECTS = sizeseq.$(OBJEXT)
+ sizeseq_OBJECTS = $(am_sizeseq_OBJECTS)
+@@ -1736,7 +1736,7 @@ sizeseq_LDADD = $(LDADD)
+ sizeseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_skipredundant_OBJECTS = skipredundant.$(OBJEXT)
+ skipredundant_OBJECTS = $(am_skipredundant_OBJECTS)
+@@ -1744,7 +1744,7 @@ skipredundant_LDADD = $(LDADD)
+ skipredundant_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_skipseq_OBJECTS = skipseq.$(OBJEXT)
+ skipseq_OBJECTS = $(am_skipseq_OBJECTS)
+@@ -1752,7 +1752,7 @@ skipseq_LDADD = $(LDADD)
+ skipseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ splitsource_SOURCES = splitsource.c
+ splitsource_OBJECTS = splitsource.$(OBJEXT)
+@@ -1760,7 +1760,7 @@ splitsource_LDADD = $(LDADD)
+ splitsource_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_splitter_OBJECTS = splitter.$(OBJEXT)
+ splitter_OBJECTS = $(am_splitter_OBJECTS)
+@@ -1768,7 +1768,7 @@ splitter_LDADD = $(LDADD)
+ splitter_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_sqltest_OBJECTS = sqltest.$(OBJEXT)
+ sqltest_OBJECTS = $(am_sqltest_OBJECTS)
+@@ -1776,7 +1776,7 @@ sqltest_LDADD = $(LDADD)
+ sqltest_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_stretcher_OBJECTS = stretcher.$(OBJEXT)
+ stretcher_OBJECTS = $(am_stretcher_OBJECTS)
+@@ -1784,7 +1784,7 @@ stretcher_LDADD = $(LDADD)
+ stretcher_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_stssearch_OBJECTS = stssearch.$(OBJEXT)
+ stssearch_OBJECTS = $(am_stssearch_OBJECTS)
+@@ -1792,7 +1792,7 @@ stssearch_LDADD = $(LDADD)
+ stssearch_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_supermatcher_OBJECTS = supermatcher.$(OBJEXT)
+ supermatcher_OBJECTS = $(am_supermatcher_OBJECTS)
+@@ -1800,7 +1800,7 @@ supermatcher_LDADD = $(LDADD)
+ supermatcher_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_syco_OBJECTS = syco.$(OBJEXT)
+ syco_OBJECTS = $(am_syco_OBJECTS)
+@@ -1808,7 +1808,7 @@ syco_LDADD = $(LDADD)
+ syco_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_tcode_OBJECTS = tcode.$(OBJEXT)
+ tcode_OBJECTS = $(am_tcode_OBJECTS)
+@@ -1816,7 +1816,7 @@ tcode_LDADD = $(LDADD)
+ tcode_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_testplot_OBJECTS = testplot.$(OBJEXT)
+ testplot_OBJECTS = $(am_testplot_OBJECTS)
+@@ -1824,7 +1824,7 @@ testplot_LDADD = $(LDADD)
+ testplot_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_textsearch_OBJECTS = textsearch.$(OBJEXT)
+ textsearch_OBJECTS = $(am_textsearch_OBJECTS)
+@@ -1832,7 +1832,7 @@ textsearch_LDADD = $(LDADD)
+ textsearch_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_tfextract_OBJECTS = tfextract.$(OBJEXT)
+ tfextract_OBJECTS = $(am_tfextract_OBJECTS)
+@@ -1840,7 +1840,7 @@ tfextract_LDADD = $(LDADD)
+ tfextract_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_tfm_OBJECTS = tfm.$(OBJEXT)
+ tfm_OBJECTS = $(am_tfm_OBJECTS)
+@@ -1848,7 +1848,7 @@ tfm_LDADD = $(LDADD)
+ tfm_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_tfscan_OBJECTS = tfscan.$(OBJEXT)
+ tfscan_OBJECTS = $(am_tfscan_OBJECTS)
+@@ -1856,7 +1856,7 @@ tfscan_LDADD = $(LDADD)
+ tfscan_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_tmap_OBJECTS = tmap.$(OBJEXT)
+ tmap_OBJECTS = $(am_tmap_OBJECTS)
+@@ -1864,7 +1864,7 @@ tmap_LDADD = $(LDADD)
+ tmap_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_tranalign_OBJECTS = tranalign.$(OBJEXT)
+ tranalign_OBJECTS = $(am_tranalign_OBJECTS)
+@@ -1872,7 +1872,7 @@ tranalign_LDADD = $(LDADD)
+ tranalign_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_transeq_OBJECTS = transeq.$(OBJEXT)
+ transeq_OBJECTS = $(am_transeq_OBJECTS)
+@@ -1880,7 +1880,7 @@ transeq_LDADD = $(LDADD)
+ transeq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_treetypedisplay_OBJECTS = treetypedisplay.$(OBJEXT)
+ treetypedisplay_OBJECTS = $(am_treetypedisplay_OBJECTS)
+@@ -1888,7 +1888,7 @@ treetypedisplay_LDADD = $(LDADD)
+ treetypedisplay_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_trimest_OBJECTS = trimest.$(OBJEXT)
+ trimest_OBJECTS = $(am_trimest_OBJECTS)
+@@ -1896,7 +1896,7 @@ trimest_LDADD = $(LDADD)
+ trimest_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_trimseq_OBJECTS = trimseq.$(OBJEXT)
+ trimseq_OBJECTS = $(am_trimseq_OBJECTS)
+@@ -1904,7 +1904,7 @@ trimseq_LDADD = $(LDADD)
+ trimseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_trimspace_OBJECTS = trimspace.$(OBJEXT)
+ trimspace_OBJECTS = $(am_trimspace_OBJECTS)
+@@ -1912,7 +1912,7 @@ trimspace_LDADD = $(LDADD)
+ trimspace_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_twofeat_OBJECTS = twofeat.$(OBJEXT)
+ twofeat_OBJECTS = $(am_twofeat_OBJECTS)
+@@ -1920,7 +1920,7 @@ twofeat_LDADD = $(LDADD)
+ twofeat_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_union_OBJECTS = union.$(OBJEXT)
+ union_OBJECTS = $(am_union_OBJECTS)
+@@ -1928,7 +1928,7 @@ union_LDADD = $(LDADD)
+ union_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_vectorstrip_OBJECTS = vectorstrip.$(OBJEXT)
+ vectorstrip_OBJECTS = $(am_vectorstrip_OBJECTS)
+@@ -1936,7 +1936,7 @@ vectorstrip_LDADD = $(LDADD)
+ vectorstrip_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_water_OBJECTS = water.$(OBJEXT)
+ water_OBJECTS = $(am_water_OBJECTS)
+@@ -1944,7 +1944,7 @@ water_LDADD = $(LDADD)
+ water_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_whichdb_OBJECTS = whichdb.$(OBJEXT)
+ whichdb_OBJECTS = $(am_whichdb_OBJECTS)
+@@ -1952,7 +1952,7 @@ whichdb_LDADD = $(LDADD)
+ whichdb_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_wobble_OBJECTS = wobble.$(OBJEXT)
+ wobble_OBJECTS = $(am_wobble_OBJECTS)
+@@ -1960,7 +1960,7 @@ wobble_LDADD = $(LDADD)
+ wobble_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_wordcount_OBJECTS = wordcount.$(OBJEXT)
+ wordcount_OBJECTS = $(am_wordcount_OBJECTS)
+@@ -1968,7 +1968,7 @@ wordcount_LDADD = $(LDADD)
+ wordcount_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_wordfinder_OBJECTS = wordfinder.$(OBJEXT)
+ wordfinder_OBJECTS = $(am_wordfinder_OBJECTS)
+@@ -1976,7 +1976,7 @@ wordfinder_LDADD = $(LDADD)
+ wordfinder_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_wordmatch_OBJECTS = wordmatch.$(OBJEXT)
+ wordmatch_OBJECTS = $(am_wordmatch_OBJECTS)
+@@ -1984,7 +1984,7 @@ wordmatch_LDADD = $(LDADD)
+ wordmatch_DEPENDENCIES = ../nucleus/libnucleus.la \
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+- ../ajax/core/libajax.la $(EXTRA_LDS) ../ajax/pcre/libepcre.la \
++ ../ajax/core/libajax.la $(EXTRA_LDS) \
+ ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
+ am_wossname_OBJECTS = wossname.$(OBJEXT)
+ wossname_OBJECTS = $(am_wossname_OBJECTS)
+@@ -1992,7 +1992,7 @@ wossname_LDADD = $(LDADD)
+ wossname_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ am_yank_OBJECTS = yank.$(OBJEXT)
+ yank_OBJECTS = $(am_yank_OBJECTS)
+@@ -2000,7 +2000,7 @@ yank_LDADD = $(LDADD)
+ yank_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ $(EXTRA_LDS) ../plplot/libeplplot.la \
+ $(am__DEPENDENCIES_1)
+ DEFAULT_INCLUDES = -I. at am__isrc@
+ depcomp = $(SHELL) $(top_srcdir)/depcomp
+@@ -2284,8 +2284,6 @@ ESYSTEMLIBS = @ESYSTEMLIBS@
+ EXEEXT = @EXEEXT@
+ FGREP = @FGREP@
+ GREP = @GREP@
+-HAVE_MEMMOVE = @HAVE_MEMMOVE@
+-HAVE_STRERROR = @HAVE_STRERROR@
+ INSTALL = @INSTALL@
+ INSTALL_DATA = @INSTALL_DATA@
+ INSTALL_PROGRAM = @INSTALL_PROGRAM@
+@@ -2412,8 +2410,8 @@ EXTRA_DIST = emboss.default.template
+ @ISAIXIA64_TRUE@@ISSHARED_TRUE@ -lacd -lajaxdb -lensembl -lajaxg -lajax -leexpat -lepcre -lezlib
+
+ AM_CFLAGS = $(AIX_CFLAGS) $(WARN_CFLAGS) $(DEVWARN_CFLAGS)
+- at ESYSTEMLIBS_FALSE@EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/zlib
+-INCLUDES = -I$(top_srcdir)/nucleus -I$(top_srcdir)/ajax/pcre \
++ at ESYSTEMLIBS_FALSE@EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/zlib -I$(top_srcdir)/ajax/pcre
++INCLUDES = -I$(top_srcdir)/nucleus \
+ $(EXTRA_INCLUDES) \
+ -I$(top_srcdir)/ajax/core -I$(top_srcdir)/ajax/graphics \
+ -I$(top_srcdir)/ajax/ensembl -I$(top_srcdir)/ajax/ajaxdb \
+@@ -2645,12 +2643,12 @@ seqrettype_SOURCES = seqrettype.c
+ sqltest_SOURCES = sqltest.c
+ testplot_SOURCES = testplot.c
+ treetypedisplay_SOURCES = treetypedisplay.c
+- at ESYSTEMLIBS_FALSE@EXTRA_LDS = ../ajax/zlib/libezlib.la ../ajax/expat/libeexpat.la
++ at ESYSTEMLIBS_FALSE@EXTRA_LDS = ../ajax/zlib/libezlib.la ../ajax/expat/libeexpat.la ../ajax/pcre/libepcre.la
+ LDADD = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+ $(EXTRA_LDS) \
+- ../ajax/pcre/libepcre.la ../plplot/libeplplot.la \
++ ../plplot/libeplplot.la \
+ $(XLIB)
+
+ pkgdata_DATA = emboss.default.template
+@@ -2667,9 +2665,9 @@ $(srcdir)/Makefile.in: $(srcdir)/Makefi
+ exit 1;; \
+ esac; \
+ done; \
+- echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu emboss/Makefile'; \
++ echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnits emboss/Makefile'; \
+ $(am__cd) $(top_srcdir) && \
+- $(AUTOMAKE) --gnu emboss/Makefile
++ $(AUTOMAKE) --gnits emboss/Makefile
+ .PRECIOUS: Makefile
+ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+ @case '$?' in \
+@@ -2732,6 +2730,22 @@ clean-binPROGRAMS:
+ echo " rm -f" $$list; \
+ rm -f $$list
+
++installcheck-binPROGRAMS: $(bin_PROGRAMS)
++ bad=0; pid=$$$$; list="$(bin_PROGRAMS)"; for p in $$list; do \
++ case ' $(AM_INSTALLCHECK_STD_OPTIONS_EXEMPT) ' in \
++ *" $$p "* | *" $(srcdir)/$$p "*) continue;; \
++ esac; \
++ f=`echo "$$p" | \
++ sed 's,^.*/,,;s/$(EXEEXT)$$//;$(transform);s/$$/$(EXEEXT)/'`; \
++ for opt in --help --version; do \
++ if "$(DESTDIR)$(bindir)/$$f" $$opt >c$${pid}_.out \
++ 2>c$${pid}_.err </dev/null \
++ && test -n "`cat c$${pid}_.out`" \
++ && test -z "`cat c$${pid}_.err`"; then :; \
++ else echo "$$f does not support $$opt" 1>&2; bad=1; fi; \
++ done; \
++ done; rm -f c$${pid}_.???; exit $$bad
++
+ clean-checkPROGRAMS:
+ @list='$(check_PROGRAMS)'; test -n "$$list" || exit 0; \
+ echo " rm -f" $$list; \
+@@ -4007,7 +4021,7 @@ install-ps: install-ps-recursive
+
+ install-ps-am:
+
+-installcheck-am:
++installcheck-am: installcheck-binPROGRAMS
+
+ maintainer-clean: maintainer-clean-recursive
+ -rm -rf ./$(DEPDIR)
+@@ -4042,12 +4056,12 @@ uninstall-am: uninstall-binPROGRAMS unin
+ install-exec install-exec-am install-html install-html-am \
+ install-info install-info-am install-man install-pdf \
+ install-pdf-am install-pkgdataDATA install-ps install-ps-am \
+- install-strip installcheck installcheck-am installdirs \
+- installdirs-am maintainer-clean maintainer-clean-generic \
+- mostlyclean mostlyclean-compile mostlyclean-generic \
+- mostlyclean-libtool pdf pdf-am ps ps-am tags tags-recursive \
+- uninstall uninstall-am uninstall-binPROGRAMS \
+- uninstall-pkgdataDATA
++ install-strip installcheck installcheck-am \
++ installcheck-binPROGRAMS installdirs installdirs-am \
++ maintainer-clean maintainer-clean-generic mostlyclean \
++ mostlyclean-compile mostlyclean-generic mostlyclean-libtool \
++ pdf pdf-am ps ps-am tags tags-recursive uninstall uninstall-am \
++ uninstall-binPROGRAMS uninstall-pkgdataDATA
+
+
+ #if PURIFY
+diff -up EMBOSS-6.3.1/nucleus/Makefile.am.system-pcre EMBOSS-6.3.1/nucleus/Makefile.am
+--- EMBOSS-6.3.1/nucleus/Makefile.am.system-pcre 2010-06-16 07:36:00.000000000 -0400
++++ EMBOSS-6.3.1/nucleus/Makefile.am 2010-08-02 16:21:49.942306124 -0400
+@@ -19,13 +19,13 @@ CYGWIN_LIBS = -L../plplot -L../ajax/pcre
+ -lezlib -leplplot
+ else
+ if !ESYSTEMLIBS
+-EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/zlib
++EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/zlib -I$(top_srcdir)/ajax/pcre
+ endif
+ endif
+
+
+ INCLUDES = -I$(top_srcdir)/plplot $(X_CFLAGS) -I$(srcdir)/ \
+- -I$(top_srcdir)/ajax -I$(top_srcdir)/ajax/pcre \
++ -I$(top_srcdir)/ajax \
+ $(EXTRA_INCLUDES) \
+ -I$(top_srcdir)/ajax/core -I$(top_srcdir)/ajax/graphics \
+ -I$(top_srcdir)/ajax/ensembl -I$(top_srcdir)/ajax/ajaxdb \
+diff -up EMBOSS-6.3.1/nucleus/Makefile.in.system-pcre EMBOSS-6.3.1/nucleus/Makefile.in
+--- EMBOSS-6.3.1/nucleus/Makefile.in.system-pcre 2010-07-19 07:55:42.000000000 -0400
++++ EMBOSS-6.3.1/nucleus/Makefile.in 2010-08-02 16:22:34.280145171 -0400
+@@ -134,8 +134,6 @@ ESYSTEMLIBS = @ESYSTEMLIBS@
+ EXEEXT = @EXEEXT@
+ FGREP = @FGREP@
+ GREP = @GREP@
+-HAVE_MEMMOVE = @HAVE_MEMMOVE@
+-HAVE_STRERROR = @HAVE_STRERROR@
+ INSTALL = @INSTALL@
+ INSTALL_DATA = @INSTALL_DATA@
+ INSTALL_PROGRAM = @INSTALL_PROGRAM@
+@@ -264,9 +262,9 @@ AM_CFLAGS = $(AIX_CFLAGS) $(WARN_CFLAGS)
+ @ISCYGWIN_TRUE at -L../ajax/acd -lacd -lajaxdb -lensembl -lajaxg -lajax -leexpat -lepcre \
+ @ISCYGWIN_TRUE at -lezlib -leplplot
+
+- at ESYSTEMLIBS_FALSE@@ISCYGWIN_FALSE at EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/zlib
++ at ESYSTEMLIBS_FALSE@@ISCYGWIN_FALSE at EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/zlib -I$(top_srcdir)/ajax/pcre
+ INCLUDES = -I$(top_srcdir)/plplot $(X_CFLAGS) -I$(srcdir)/ \
+- -I$(top_srcdir)/ajax -I$(top_srcdir)/ajax/pcre \
++ -I$(top_srcdir)/ajax \
+ $(EXTRA_INCLUDES) \
+ -I$(top_srcdir)/ajax/core -I$(top_srcdir)/ajax/graphics \
+ -I$(top_srcdir)/ajax/ensembl -I$(top_srcdir)/ajax/ajaxdb \
+@@ -303,9 +301,9 @@ $(srcdir)/Makefile.in: $(srcdir)/Makefi
+ exit 1;; \
+ esac; \
+ done; \
+- echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnu nucleus/Makefile'; \
++ echo ' cd $(top_srcdir) && $(AUTOMAKE) --gnits nucleus/Makefile'; \
+ $(am__cd) $(top_srcdir) && \
+- $(AUTOMAKE) --gnu nucleus/Makefile
++ $(AUTOMAKE) --gnits nucleus/Makefile
+ .PRECIOUS: Makefile
+ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
+ @case '$?' in \
diff --git a/EMBOSS-6.3.1-system-plplot.patch b/EMBOSS-6.3.1-system-plplot.patch
new file mode 100644
index 0000000..465aca9
--- /dev/null
+++ b/EMBOSS-6.3.1-system-plplot.patch
@@ -0,0 +1,3154 @@
+diff -up EMBOSS-6.3.1/aclocal.m4.system-plplot EMBOSS-6.3.1/aclocal.m4
+--- EMBOSS-6.3.1/aclocal.m4.system-plplot 2010-07-19 07:55:32.000000000 -0400
++++ EMBOSS-6.3.1/aclocal.m4 2010-08-03 08:01:37.975129562 -0400
+@@ -8904,6 +8904,7 @@ m4_include([m4/hpdf.m4])
+ m4_include([m4/java.m4])
+ m4_include([m4/lf_x11.m4])
+ m4_include([m4/mysql.m4])
++m4_include([m4/plplot.m4])
+ m4_include([m4/pngdriver.m4])
+ m4_include([m4/postgresql.m4])
+ m4_include([m4/sgi.m4])
+diff -up EMBOSS-6.3.1/ajax/acd/Makefile.am.system-plplot EMBOSS-6.3.1/ajax/acd/Makefile.am
+--- EMBOSS-6.3.1/ajax/acd/Makefile.am.system-plplot 2010-08-03 08:01:37.953240192 -0400
++++ EMBOSS-6.3.1/ajax/acd/Makefile.am 2010-08-03 08:01:37.976128933 -0400
+@@ -13,10 +13,10 @@ CYGWIN_LDACD = -L../../plplot -L../pcre
+ endif
+
+ if !ESYSTEMLIBS
+-EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/zlib -I$(top_srcdir)/ajax/pcre
++EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/zlib -I$(top_srcdir)/ajax/pcre -I$(top_srcdir)/plplot
+ endif
+
+-INCLUDES = -I$(top_srcdir)/plplot \
++INCLUDES = $(PLPLOT_CFLAGS) \
+ $(EXTRA_INCLUDES) \
+ -I$(top_srcdir)/ajax/core \
+ -I$(top_srcdir)/ajax/graphics \
+diff -up EMBOSS-6.3.1/ajax/acd/Makefile.in.system-plplot EMBOSS-6.3.1/ajax/acd/Makefile.in
+--- EMBOSS-6.3.1/ajax/acd/Makefile.in.system-plplot 2010-08-03 08:01:37.953240192 -0400
++++ EMBOSS-6.3.1/ajax/acd/Makefile.in 2010-08-03 08:01:37.976128933 -0400
+@@ -42,9 +42,9 @@ ACLOCAL_M4 = $(top_srcdir)/aclocal.m4
+ am__aclocal_m4_deps = $(top_srcdir)/m4/amd64.m4 \
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+- $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pngdriver.m4 \
+- $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+- $(top_srcdir)/configure.in
++ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
++ $(top_srcdir)/m4/pngdriver.m4 $(top_srcdir)/m4/postgresql.m4 \
++ $(top_srcdir)/m4/sgi.m4 $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+ $(ACLOCAL_M4)
+ mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
+@@ -174,6 +174,8 @@ PCRE_MINOR = @PCRE_MINOR@
+ PCRE_POSIXLIB_VERSION = @PCRE_POSIXLIB_VERSION@
+ PCRE_VERSION = @PCRE_VERSION@
+ PG_CONFIG = @PG_CONFIG@
++PLPLOT_CFLAGS = @PLPLOT_CFLAGS@
++PLPLOT_LIBS = @PLPLOT_LIBS@
+ POSIX_MALLOC_THRESHOLD = @POSIX_MALLOC_THRESHOLD@
+ POSTGRESQL_CFLAGS = @POSTGRESQL_CFLAGS@
+ POSTGRESQL_LDFLAGS = @POSTGRESQL_LDFLAGS@
+@@ -256,8 +258,8 @@ AM_CFLAGS = $(WARN_CFLAGS) $(DEVWARN_CFL
+ @ISCYGWIN_TRUE at -L../graphics -L../ensembl -L../ajaxdb -lajaxdb -lensembl -lajaxg -lajax \
+ @ISCYGWIN_TRUE at -leplplot -leexpat -lepcre -lezlib
+
+- at ESYSTEMLIBS_FALSE@EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/zlib -I$(top_srcdir)/ajax/pcre
+-INCLUDES = -I$(top_srcdir)/plplot \
++ at ESYSTEMLIBS_FALSE@EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/zlib -I$(top_srcdir)/ajax/pcre -I$(top_srcdir)/plplot
++INCLUDES = $(PLPLOT_CFLAGS) \
+ $(EXTRA_INCLUDES) \
+ -I$(top_srcdir)/ajax/core \
+ -I$(top_srcdir)/ajax/graphics \
+diff -up EMBOSS-6.3.1/ajax/ajaxdb/Makefile.am.system-plplot EMBOSS-6.3.1/ajax/ajaxdb/Makefile.am
+--- EMBOSS-6.3.1/ajax/ajaxdb/Makefile.am.system-plplot 2010-08-03 08:01:37.953240192 -0400
++++ EMBOSS-6.3.1/ajax/ajaxdb/Makefile.am 2010-08-03 08:01:37.977129283 -0400
+@@ -13,11 +13,11 @@ CYGWIN_LDAJAXDB = -L../../plplot -L../pc
+ endif
+
+ if !ESYSTEMLIBS
+-EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/zlib -I$(top_srcdir)/ajax/pcre
++EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/zlib -I$(top_srcdir)/ajax/pcre -I$(top_srcdir)/plplot
+ endif
+
+
+-INCLUDES = -I$(top_srcdir)/plplot \
++INCLUDES = $(PLPLOT_CFLAGS) \
+ $(EXTRA_INCLUDES) \
+ -I$(top_srcdir)/ajax/core -I$(top_srcdir)/ajax/ensembl
+
+diff -up EMBOSS-6.3.1/ajax/ajaxdb/Makefile.in.system-plplot EMBOSS-6.3.1/ajax/ajaxdb/Makefile.in
+--- EMBOSS-6.3.1/ajax/ajaxdb/Makefile.in.system-plplot 2010-08-03 08:01:37.954253392 -0400
++++ EMBOSS-6.3.1/ajax/ajaxdb/Makefile.in 2010-08-03 08:01:37.977129283 -0400
+@@ -42,7 +42,8 @@ ACLOCAL_M4 = $(top_srcdir)/aclocal.m4
+ am__aclocal_m4_deps = $(top_srcdir)/m4/amd64.m4 \
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+- $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pngdriver.m4 \
++ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
++ $(top_srcdir)/m4/pngdriver.m4 \
+ $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+ $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+@@ -174,6 +175,8 @@ PCRE_MINOR = @PCRE_MINOR@
+ PCRE_POSIXLIB_VERSION = @PCRE_POSIXLIB_VERSION@
+ PCRE_VERSION = @PCRE_VERSION@
+ PG_CONFIG = @PG_CONFIG@
++PLPLOT_CFLAGS = @PLPLOT_CFLAGS@
++PLPLOT_LIBS = @PLPLOT_LIBS@
+ POSIX_MALLOC_THRESHOLD = @POSIX_MALLOC_THRESHOLD@
+ POSTGRESQL_CFLAGS = @POSTGRESQL_CFLAGS@
+ POSTGRESQL_LDFLAGS = @POSTGRESQL_LDFLAGS@
+@@ -255,8 +258,8 @@ AM_CFLAGS = $(WARN_CFLAGS) $(DEVWARN_CFL
+ @ISCYGWIN_TRUE at CYGWIN_LDAJAXDB = -L../../plplot -L../pcre -L../expat -L../zlib -L../core \
+ @ISCYGWIN_TRUE at -L../ensembl -lensembl lajax -leplplot -leexpat -lepcre -lezlib
+
+- at ESYSTEMLIBS_FALSE@EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/zlib -I$(top_srcdir)/ajax/pcre
+-INCLUDES = -I$(top_srcdir)/plplot \
++ at ESYSTEMLIBS_FALSE@EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/zlib -I$(top_srcdir)/ajax/pcre -I$(top_srcdir)/plplot
++INCLUDES = $(PLPLOT_CFLAGS) \
+ $(EXTRA_INCLUDES) \
+ -I$(top_srcdir)/ajax/core -I$(top_srcdir)/ajax/ensembl
+
+diff -up EMBOSS-6.3.1/ajax/core/Makefile.am.system-plplot EMBOSS-6.3.1/ajax/core/Makefile.am
+--- EMBOSS-6.3.1/ajax/core/Makefile.am.system-plplot 2010-08-03 08:01:37.954253392 -0400
++++ EMBOSS-6.3.1/ajax/core/Makefile.am 2010-08-03 08:01:37.978128794 -0400
+@@ -12,13 +12,13 @@ CYGWIN_LDAJAX = -L../../plplot -L../expa
+ endif
+
+ if !ESYSTEMLIBS
+-EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/zlib -I$(top_srcdir)/ajax/pcre
++EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/zlib -I$(top_srcdir)/ajax/pcre -I$(top_srcdir)/plplot
+ endif
+
+
+ INCLUDES = -DAJAX_FIXED_ROOT=$(AJAX_FIXED_ROOT) \
+ -DAJAX_SYSTEM="$(AJAX_SYSTEM)" -DPREFIX=\"$(prefix)\" \
+--I$(top_srcdir)/plplot $(EXTRA_INCLUDES)
++$(PLPLOT_CFLAGS) $(EXTRA_INCLUDES)
+
+ AJAXSRC = ajalign.c ajarr.c ajassert.c \
+ ajbase.c ajcall.c ajcod.c \
+diff -up EMBOSS-6.3.1/ajax/core/Makefile.in.system-plplot EMBOSS-6.3.1/ajax/core/Makefile.in
+--- EMBOSS-6.3.1/ajax/core/Makefile.in.system-plplot 2010-08-03 08:01:37.955251716 -0400
++++ EMBOSS-6.3.1/ajax/core/Makefile.in 2010-08-03 08:01:37.978128794 -0400
+@@ -42,7 +42,8 @@ ACLOCAL_M4 = $(top_srcdir)/aclocal.m4
+ am__aclocal_m4_deps = $(top_srcdir)/m4/amd64.m4 \
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+- $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pngdriver.m4 \
++ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
++ $(top_srcdir)/m4/pngdriver.m4 \
+ $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+ $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+@@ -183,6 +184,8 @@ PCRE_MINOR = @PCRE_MINOR@
+ PCRE_POSIXLIB_VERSION = @PCRE_POSIXLIB_VERSION@
+ PCRE_VERSION = @PCRE_VERSION@
+ PG_CONFIG = @PG_CONFIG@
++PLPLOT_CFLAGS = @PLPLOT_CFLAGS@
++PLPLOT_LIBS = @PLPLOT_LIBS@
+ POSIX_MALLOC_THRESHOLD = @POSIX_MALLOC_THRESHOLD@
+ POSTGRESQL_CFLAGS = @POSTGRESQL_CFLAGS@
+ POSTGRESQL_LDFLAGS = @POSTGRESQL_LDFLAGS@
+@@ -264,10 +267,10 @@ AM_CFLAGS = $(WARN_CFLAGS) $(DEVWARN_CFL
+ @ISCYGWIN_TRUE at CYGWIN_LDAJAX = -L../../plplot -L../expat -L../pcre -L../zlib \
+ @ISCYGWIN_TRUE at -leplplot -leexpat -lepcre -lezlib
+
+- at ESYSTEMLIBS_FALSE@EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/zlib -I$(top_srcdir)/ajax/pcre
++ at ESYSTEMLIBS_FALSE@EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/zlib -I$(top_srcdir)/ajax/pcre -I$(top_srcdir)/plplot
+ INCLUDES = -DAJAX_FIXED_ROOT=$(AJAX_FIXED_ROOT) \
+ -DAJAX_SYSTEM="$(AJAX_SYSTEM)" -DPREFIX=\"$(prefix)\" \
+--I$(top_srcdir)/plplot $(EXTRA_INCLUDES)
++$(PLPLOT_CFLAGS) $(EXTRA_INCLUDES)
+
+ AJAXSRC = ajalign.c ajarr.c ajassert.c \
+ ajbase.c ajcall.c ajcod.c \
+diff -up EMBOSS-6.3.1/ajax/ensembl/Makefile.am.system-plplot EMBOSS-6.3.1/ajax/ensembl/Makefile.am
+--- EMBOSS-6.3.1/ajax/ensembl/Makefile.am.system-plplot 2010-08-03 08:01:37.955251716 -0400
++++ EMBOSS-6.3.1/ajax/ensembl/Makefile.am 2010-08-03 08:01:37.978128794 -0400
+@@ -10,11 +10,11 @@ CYGWIN_LDENSEMBL = -L../../plplot -L../e
+ endif
+
+ if !ESYSTEMLIBS
+-EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/pcre
++EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/pcre -I$(top_srcdir)/plplot
+ endif
+
+
+-INCLUDES = -I$(top_srcdir)/plplot $(EXTRA_INCLUDES) \
++INCLUDES = $(PLPLOT_CFLAGS) $(EXTRA_INCLUDES) \
+ -I$(top_srcdir)/ajax/core
+
+ ENSEMBLSRC = ensanalysis.c ensassembly.c ensassemblyexception.c \
+diff -up EMBOSS-6.3.1/ajax/ensembl/Makefile.in.system-plplot EMBOSS-6.3.1/ajax/ensembl/Makefile.in
+--- EMBOSS-6.3.1/ajax/ensembl/Makefile.in.system-plplot 2010-08-03 08:01:37.956253741 -0400
++++ EMBOSS-6.3.1/ajax/ensembl/Makefile.in 2010-08-03 08:01:37.979128584 -0400
+@@ -42,7 +42,8 @@ ACLOCAL_M4 = $(top_srcdir)/aclocal.m4
+ am__aclocal_m4_deps = $(top_srcdir)/m4/amd64.m4 \
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+- $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pngdriver.m4 \
++ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
++ $(top_srcdir)/m4/pngdriver.m4 \
+ $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+ $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+@@ -187,6 +188,8 @@ PCRE_MINOR = @PCRE_MINOR@
+ PCRE_POSIXLIB_VERSION = @PCRE_POSIXLIB_VERSION@
+ PCRE_VERSION = @PCRE_VERSION@
+ PG_CONFIG = @PG_CONFIG@
++PLPLOT_CFLAGS = @PLPLOT_CFLAGS@
++PLPLOT_LIBS = @PLPLOT_LIBS@
+ POSIX_MALLOC_THRESHOLD = @POSIX_MALLOC_THRESHOLD@
+ POSTGRESQL_CFLAGS = @POSTGRESQL_CFLAGS@
+ POSTGRESQL_LDFLAGS = @POSTGRESQL_LDFLAGS@
+@@ -264,8 +267,8 @@ lib_LTLIBRARIES = libensembl.la
+ AM_CFLAGS = $(WARN_CFLAGS) $(DEVWARN_CFLAGS)
+ @ISCYGWIN_TRUE at CYGWIN_LDFLAGS = -no-undefined -Wl,--add-stdcall-alias -Wl,--export-all-symbols -Wl,--enable-auto-import
+ @ISCYGWIN_TRUE at CYGWIN_LDENSEMBL = -L../../plplot -L../expat -L../pcre -L../core -lajax -leplplot -leexpat -lepcre
+- at ESYSTEMLIBS_FALSE@EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/pcre
+-INCLUDES = -I$(top_srcdir)/plplot $(EXTRA_INCLUDES) \
++ at ESYSTEMLIBS_FALSE@EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/pcre -I$(top_srcdir)/plplot
++INCLUDES = $(PLPLOT_CFLAGS) $(EXTRA_INCLUDES) \
+ -I$(top_srcdir)/ajax/core
+
+ ENSEMBLSRC = ensanalysis.c ensassembly.c ensassemblyexception.c \
+diff -up EMBOSS-6.3.1/ajax/expat/Makefile.in.system-plplot EMBOSS-6.3.1/ajax/expat/Makefile.in
+--- EMBOSS-6.3.1/ajax/expat/Makefile.in.system-plplot 2010-07-19 07:55:40.000000000 -0400
++++ EMBOSS-6.3.1/ajax/expat/Makefile.in 2010-08-03 08:01:37.979128584 -0400
+@@ -41,7 +41,8 @@ ACLOCAL_M4 = $(top_srcdir)/aclocal.m4
+ am__aclocal_m4_deps = $(top_srcdir)/m4/amd64.m4 \
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+- $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pngdriver.m4 \
++ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
++ $(top_srcdir)/m4/pngdriver.m4 \
+ $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+ $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+@@ -177,6 +178,8 @@ PCRE_MINOR = @PCRE_MINOR@
+ PCRE_POSIXLIB_VERSION = @PCRE_POSIXLIB_VERSION@
+ PCRE_VERSION = @PCRE_VERSION@
+ PG_CONFIG = @PG_CONFIG@
++PLPLOT_CFLAGS = @PLPLOT_CFLAGS@
++PLPLOT_LIBS = @PLPLOT_LIBS@
+ POSIX_MALLOC_THRESHOLD = @POSIX_MALLOC_THRESHOLD@
+ POSTGRESQL_CFLAGS = @POSTGRESQL_CFLAGS@
+ POSTGRESQL_LDFLAGS = @POSTGRESQL_LDFLAGS@
+diff -up EMBOSS-6.3.1/ajax/graphics/ajgraph.c.system-plplot EMBOSS-6.3.1/ajax/graphics/ajgraph.c
+--- EMBOSS-6.3.1/ajax/graphics/ajgraph.c.system-plplot 2010-07-19 07:40:00.000000000 -0400
++++ EMBOSS-6.3.1/ajax/graphics/ajgraph.c 2010-08-03 08:01:37.982131238 -0400
+@@ -35,7 +35,7 @@
+ #define AZ 28
+
+
+-#include "plplotP.h"
++#include <plplotP.h>
+
+
+ static void GraphArray(ajuint numofpoints,
+@@ -1054,8 +1054,8 @@ static void GraphSetName(const AjPGraph
+ {
+ if(!thys->ready)
+ {
+- ajDebug("=g= plxsfnam ('%S', '%s')\n", txt, ext);
+- plxsfnam(ajStrGetPtr(txt), ext);
++ ajDebug("=g= plsfnam ('%S')\n", txt);
++ plsfnam(ajStrGetPtr(txt));
+ ajStrAssignS(&graphBasename, txt);
+ ajStrAssignC(&graphExtension, ext);
+ if(ajStrGetCharFirst(graphExtension) == '.')
+diff -up EMBOSS-6.3.1/ajax/graphics/ajgraph.h.system-plplot EMBOSS-6.3.1/ajax/graphics/ajgraph.h
+--- EMBOSS-6.3.1/ajax/graphics/ajgraph.h.system-plplot 2010-04-14 03:39:49.000000000 -0400
++++ EMBOSS-6.3.1/ajax/graphics/ajgraph.h 2010-08-03 08:01:37.982131238 -0400
+@@ -29,7 +29,7 @@ extern "C"
+ #ifndef ajgraph_h
+ #define ajgraph_h
+
+-#include "plplot.h"
++#include <plplot.h>
+ #include "ajgraphstruct.h"
+ #include "ajdefine.h"
+ #include "ajstr.h"
+diff -up EMBOSS-6.3.1/ajax/graphics/Makefile.am.system-plplot EMBOSS-6.3.1/ajax/graphics/Makefile.am
+--- EMBOSS-6.3.1/ajax/graphics/Makefile.am.system-plplot 2010-08-03 08:01:37.956253741 -0400
++++ EMBOSS-6.3.1/ajax/graphics/Makefile.am 2010-08-03 08:01:37.982131238 -0400
+@@ -10,11 +10,11 @@ CYGWIN_LDAJAXG = -L../../plplot -L../exp
+ endif
+
+ if !ESYSTEMLIBS
+-EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/pcre
++EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/pcre -I$(top_srcdir)/plplot
+ endif
+
+
+-INCLUDES = -I$(top_srcdir)/plplot \
++INCLUDES = $(PLPLOT_CFLAGS) \
+ $(EXTRA_INCLUDES) -I$(top_srcdir)/ajax/core
+
+ AJAXGSRC = ajgraph.c ajhist.c
+diff -up EMBOSS-6.3.1/ajax/graphics/Makefile.in.system-plplot EMBOSS-6.3.1/ajax/graphics/Makefile.in
+--- EMBOSS-6.3.1/ajax/graphics/Makefile.in.system-plplot 2010-08-03 08:01:37.956253741 -0400
++++ EMBOSS-6.3.1/ajax/graphics/Makefile.in 2010-08-03 08:01:37.983130749 -0400
+@@ -42,7 +42,8 @@ ACLOCAL_M4 = $(top_srcdir)/aclocal.m4
+ am__aclocal_m4_deps = $(top_srcdir)/m4/amd64.m4 \
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+- $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pngdriver.m4 \
++ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
++ $(top_srcdir)/m4/pngdriver.m4 \
+ $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+ $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+@@ -174,6 +175,8 @@ PCRE_MINOR = @PCRE_MINOR@
+ PCRE_POSIXLIB_VERSION = @PCRE_POSIXLIB_VERSION@
+ PCRE_VERSION = @PCRE_VERSION@
+ PG_CONFIG = @PG_CONFIG@
++PLPLOT_CFLAGS = @PLPLOT_CFLAGS@
++PLPLOT_LIBS = @PLPLOT_LIBS@
+ POSIX_MALLOC_THRESHOLD = @POSIX_MALLOC_THRESHOLD@
+ POSTGRESQL_CFLAGS = @POSTGRESQL_CFLAGS@
+ POSTGRESQL_LDFLAGS = @POSTGRESQL_LDFLAGS@
+@@ -251,8 +254,8 @@ lib_LTLIBRARIES = libajaxg.la
+ AM_CFLAGS = $(WARN_CFLAGS) $(DEVWARN_CFLAGS)
+ @ISCYGWIN_TRUE at CYGWIN_LDFLAGS = -no-undefined -Wl,--add-stdcall-alias -Wl,--export-all-symbols -Wl,--enable-auto-import
+ @ISCYGWIN_TRUE at CYGWIN_LDAJAXG = -L../../plplot -L../expat -L../pcre -L../core -lajax -leplplot -leexpat -lepcre
+- at ESYSTEMLIBS_FALSE@EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/pcre
+-INCLUDES = -I$(top_srcdir)/plplot \
++ at ESYSTEMLIBS_FALSE@EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/pcre -I$(top_srcdir)/plplot
++INCLUDES = $(PLPLOT_CFLAGS) \
+ $(EXTRA_INCLUDES) -I$(top_srcdir)/ajax/core
+
+ AJAXGSRC = ajgraph.c ajhist.c
+diff -up EMBOSS-6.3.1/ajax/Makefile.in.system-plplot EMBOSS-6.3.1/ajax/Makefile.in
+--- EMBOSS-6.3.1/ajax/Makefile.in.system-plplot 2010-08-03 08:01:37.957253392 -0400
++++ EMBOSS-6.3.1/ajax/Makefile.in 2010-08-03 08:01:37.983130749 -0400
+@@ -39,7 +39,8 @@ ACLOCAL_M4 = $(top_srcdir)/aclocal.m4
+ am__aclocal_m4_deps = $(top_srcdir)/m4/amd64.m4 \
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+- $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pngdriver.m4 \
++ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
++ $(top_srcdir)/m4/pngdriver.m4 \
+ $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+ $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+@@ -165,6 +166,8 @@ PCRE_MINOR = @PCRE_MINOR@
+ PCRE_POSIXLIB_VERSION = @PCRE_POSIXLIB_VERSION@
+ PCRE_VERSION = @PCRE_VERSION@
+ PG_CONFIG = @PG_CONFIG@
++PLPLOT_CFLAGS = @PLPLOT_CFLAGS@
++PLPLOT_LIBS = @PLPLOT_LIBS@
+ POSIX_MALLOC_THRESHOLD = @POSIX_MALLOC_THRESHOLD@
+ POSTGRESQL_CFLAGS = @POSTGRESQL_CFLAGS@
+ POSTGRESQL_LDFLAGS = @POSTGRESQL_LDFLAGS@
+diff -up EMBOSS-6.3.1/configure.in.system-plplot EMBOSS-6.3.1/configure.in
+--- EMBOSS-6.3.1/configure.in.system-plplot 2010-08-03 08:01:37.957253392 -0400
++++ EMBOSS-6.3.1/configure.in 2010-08-03 08:01:37.983130749 -0400
+@@ -288,6 +288,7 @@ CHECK_GENERAL
+ CHECK_JAVA
+ CHECK_JAVAOS
+ CHECK_HPDF
++CHECK_PLPLOT
+ CHECK_PNGDRIVER
+ CHECK_AUTH
+ CHECK_AMD64
+@@ -659,8 +660,8 @@ dnl check and set compilation flags for
+ CHECK_THREADS
+
+
+-AC_OUTPUT([plplot/Makefile plplot/lib/Makefile nucleus/Makefile ajax/Makefile
+-ajax/expat/Makefile ajax/zlib/Makefile ajax/core/Makefile
++AC_OUTPUT([nucleus/Makefile ajax/Makefile
++ajax/core/Makefile
+ ajax/graphics/Makefile ajax/ensembl/Makefile ajax/ajaxdb/Makefile
+ ajax/acd/Makefile
+ emboss/Makefile emboss/acd/Makefile test/Makefile test/data/Makefile
+diff -up EMBOSS-6.3.1/configure.system-plplot EMBOSS-6.3.1/configure
+--- EMBOSS-6.3.1/configure.system-plplot 2010-08-03 08:01:37.962261284 -0400
++++ EMBOSS-6.3.1/configure 2010-08-03 08:01:37.986131587 -0400
+@@ -792,6 +792,8 @@ MYSQL_LDFLAGS
+ MYSQL_CFLAGS
+ MYSQL_VERSION
+ MYSQL_CONFIG
++PLPLOT_LIBS
++PLPLOT_CFLAGS
+ JAVA_OK
+ havejavac
+ AMPDF_FALSE
+@@ -13647,6 +13649,199 @@ $as_echo "no" >&6; }
+ fi
+
+
++PLPLOT_LIBS=""
++OLIBS="$LIBS"
++LIBS=""
++
++check_plplot_ok=yes
++check_plplotpkg_ok=no
++if test x = x && test x = x; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for PLPlot pkg-config info" >&5
++$as_echo_n "checking for PLPlot pkg-config info... " >&6; }
++ if pkg-config --exists plplotd; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
++$as_echo "yes" >&6; }
++ PLPLOT_CFLAGS=`pkg-config --cflags plplotd`
++ PLPLOT_LIBS=`pkg-config --libs plplotd`
++
++$as_echo "#define PLPLOT_H \"plplot.h\"" >>confdefs.h
++
++
++$as_echo "#define PLPLOTP_H \"plplotP.h\"" >>confdefs.h
++
++ check_plplotpkg_ok=yes
++ else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++ fi
++fi
++if test x$check_plplotpkg_ok = xno; then
++ if test x = x; then
++ ac_fn_c_check_header_mongrel "$LINENO" "plplot.h" "ac_cv_header_plplot_h" "$ac_includes_default"
++if test "x$ac_cv_header_plplot_h" = x""yes; then :
++ check_plplothead_ok=yes
++else
++ check_plplothead_ok=no
++fi
++
++
++ if test x$check_plplothead_ok = xyes; then
++
++$as_echo "#define PLPLOT_H \"plplot.h\"" >>confdefs.h
++
++
++$as_echo "#define PLPLOTP_H \"plplotP.h\"" >>confdefs.h
++
++ else
++ ac_fn_c_check_header_mongrel "$LINENO" "plplot/plplot.h" "ac_cv_header_plplot_plplot_h" "$ac_includes_default"
++if test "x$ac_cv_header_plplot_plplot_h" = x""yes; then :
++ check_plplothead_ok=yes
++else
++ check_plplothead_ok=no
++fi
++
++
++ if test x$check_plplothead_ok = xyes; then
++
++$as_echo "#define PLPLOT_H \"plplot/plplot.h\"" >>confdefs.h
++
++
++$as_echo "#define PLPLOTP_H \"plplot/plplotP.h\"" >>confdefs.h
++
++ else
++ check_plplot_ok=no
++ fi
++ fi
++ else
++ ac_fn_c_check_header_mongrel "$LINENO" "/plplot.h" "ac_cv_header__plplot_h" "$ac_includes_default"
++if test "x$ac_cv_header__plplot_h" = x""yes; then :
++ check_plplothead_ok=yes
++else
++ check_plplothead_ok=no
++fi
++
++
++ if test x$check_plplothead_ok = xyes; then
++
++$as_echo "#define PLPLOT_H \"plplot.h\"" >>confdefs.h
++
++
++$as_echo "#define PLPLOTP_H \"plplotP.h\"" >>confdefs.h
++
++ PLPLOT_CFLAGS="-I"
++ else
++ check_plplot_ok=no
++ fi
++ fi
++ if test x = x; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for c_plinit in -lplplotd" >&5
++$as_echo_n "checking for c_plinit in -lplplotd... " >&6; }
++if test "${ac_cv_lib_plplotd_c_plinit+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ ac_check_lib_save_LIBS=$LIBS
++LIBS="-lplplotd $LIBS"
++cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++/* Override any GCC internal prototype to avoid an error.
++ Use char because int might match the return type of a GCC
++ builtin and then its argument prototype would still apply. */
++#ifdef __cplusplus
++extern "C"
++#endif
++char c_plinit ();
++int
++main ()
++{
++return c_plinit ();
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_link "$LINENO"; then :
++ ac_cv_lib_plplotd_c_plinit=yes
++else
++ ac_cv_lib_plplotd_c_plinit=no
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext conftest.$ac_ext
++LIBS=$ac_check_lib_save_LIBS
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_plplotd_c_plinit" >&5
++$as_echo "$ac_cv_lib_plplotd_c_plinit" >&6; }
++if test "x$ac_cv_lib_plplotd_c_plinit" = x""yes; then :
++ cat >>confdefs.h <<_ACEOF
++#define HAVE_LIBPLPLOTD 1
++_ACEOF
++
++ LIBS="-lplplotd $LIBS"
++
++else
++ check_plplot_ok=no
++fi
++
++ PLPLOT_LIBS="-lplplotd"
++ else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for c_plinit in -lplplotd" >&5
++$as_echo_n "checking for c_plinit in -lplplotd... " >&6; }
++if test "${ac_cv_lib_plplotd_c_plinit+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ ac_check_lib_save_LIBS=$LIBS
++LIBS="-lplplotd -L $LIBS"
++cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++/* Override any GCC internal prototype to avoid an error.
++ Use char because int might match the return type of a GCC
++ builtin and then its argument prototype would still apply. */
++#ifdef __cplusplus
++extern "C"
++#endif
++char c_plinit ();
++int
++main ()
++{
++return c_plinit ();
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_link "$LINENO"; then :
++ ac_cv_lib_plplotd_c_plinit=yes
++else
++ ac_cv_lib_plplotd_c_plinit=no
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext conftest.$ac_ext
++LIBS=$ac_check_lib_save_LIBS
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_plplotd_c_plinit" >&5
++$as_echo "$ac_cv_lib_plplotd_c_plinit" >&6; }
++if test "x$ac_cv_lib_plplotd_c_plinit" = x""yes; then :
++ cat >>confdefs.h <<_ACEOF
++#define HAVE_LIBPLPLOTD 1
++_ACEOF
++
++ LIBS="-lplplotd $LIBS"
++
++else
++ check_plplot_ok=no
++fi
++
++ PLPLOT_LIBS="-L -lplplotd"
++ fi
++fi
++
++LIBS="$OLIBS"
++if test x$check_plplot_ok = xyes; then
++
++
++
++$as_echo "#define HAVE_PLPLOT 1" >>confdefs.h
++
++fi
+
+
+ #
+@@ -13780,6 +13975,204 @@ fi
+
+
+
++
++
++
++PLPLOT_LIBS=""
++OLIBS="$LIBS"
++LIBS=""
++
++check_plplot_ok=yes
++check_plplotpkg_ok=no
++if test x = x && test x = x; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for PLPlot pkg-config info" >&5
++$as_echo_n "checking for PLPlot pkg-config info... " >&6; }
++ if pkg-config --exists plplotd; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: yes" >&5
++$as_echo "yes" >&6; }
++ PLPLOT_CFLAGS=`pkg-config --cflags plplotd`
++ PLPLOT_LIBS=`pkg-config --libs plplotd`
++
++$as_echo "#define PLPLOT_H \"plplot.h\"" >>confdefs.h
++
++
++$as_echo "#define PLPLOTP_H \"plplotP.h\"" >>confdefs.h
++
++ check_plplotpkg_ok=yes
++ else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: result: no" >&5
++$as_echo "no" >&6; }
++ fi
++fi
++if test x$check_plplotpkg_ok = xno; then
++ if test x = x; then
++ ac_fn_c_check_header_mongrel "$LINENO" "plplot.h" "ac_cv_header_plplot_h" "$ac_includes_default"
++if test "x$ac_cv_header_plplot_h" = x""yes; then :
++ check_plplothead_ok=yes
++else
++ check_plplothead_ok=no
++fi
++
++
++ if test x$check_plplothead_ok = xyes; then
++
++$as_echo "#define PLPLOT_H \"plplot.h\"" >>confdefs.h
++
++
++$as_echo "#define PLPLOTP_H \"plplotP.h\"" >>confdefs.h
++
++ else
++ ac_fn_c_check_header_mongrel "$LINENO" "plplot/plplot.h" "ac_cv_header_plplot_plplot_h" "$ac_includes_default"
++if test "x$ac_cv_header_plplot_plplot_h" = x""yes; then :
++ check_plplothead_ok=yes
++else
++ check_plplothead_ok=no
++fi
++
++
++ if test x$check_plplothead_ok = xyes; then
++
++$as_echo "#define PLPLOT_H \"plplot/plplot.h\"" >>confdefs.h
++
++
++$as_echo "#define PLPLOTP_H \"plplot/plplotP.h\"" >>confdefs.h
++
++ else
++ check_plplot_ok=no
++ fi
++ fi
++ else
++ ac_fn_c_check_header_mongrel "$LINENO" "/plplot.h" "ac_cv_header__plplot_h" "$ac_includes_default"
++if test "x$ac_cv_header__plplot_h" = x""yes; then :
++ check_plplothead_ok=yes
++else
++ check_plplothead_ok=no
++fi
++
++
++ if test x$check_plplothead_ok = xyes; then
++
++$as_echo "#define PLPLOT_H \"plplot.h\"" >>confdefs.h
++
++
++$as_echo "#define PLPLOTP_H \"plplotP.h\"" >>confdefs.h
++
++ PLPLOT_CFLAGS="-I"
++ else
++ check_plplot_ok=no
++ fi
++ fi
++ if test x = x; then
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for c_plinit in -lplplotd" >&5
++$as_echo_n "checking for c_plinit in -lplplotd... " >&6; }
++if test "${ac_cv_lib_plplotd_c_plinit+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ ac_check_lib_save_LIBS=$LIBS
++LIBS="-lplplotd $LIBS"
++cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++/* Override any GCC internal prototype to avoid an error.
++ Use char because int might match the return type of a GCC
++ builtin and then its argument prototype would still apply. */
++#ifdef __cplusplus
++extern "C"
++#endif
++char c_plinit ();
++int
++main ()
++{
++return c_plinit ();
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_link "$LINENO"; then :
++ ac_cv_lib_plplotd_c_plinit=yes
++else
++ ac_cv_lib_plplotd_c_plinit=no
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext conftest.$ac_ext
++LIBS=$ac_check_lib_save_LIBS
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_plplotd_c_plinit" >&5
++$as_echo "$ac_cv_lib_plplotd_c_plinit" >&6; }
++if test "x$ac_cv_lib_plplotd_c_plinit" = x""yes; then :
++ cat >>confdefs.h <<_ACEOF
++#define HAVE_LIBPLPLOTD 1
++_ACEOF
++
++ LIBS="-lplplotd $LIBS"
++
++else
++ check_plplot_ok=no
++fi
++
++ PLPLOT_LIBS="-lplplotd"
++ else
++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for c_plinit in -lplplotd" >&5
++$as_echo_n "checking for c_plinit in -lplplotd... " >&6; }
++if test "${ac_cv_lib_plplotd_c_plinit+set}" = set; then :
++ $as_echo_n "(cached) " >&6
++else
++ ac_check_lib_save_LIBS=$LIBS
++LIBS="-lplplotd -L $LIBS"
++cat confdefs.h - <<_ACEOF >conftest.$ac_ext
++/* end confdefs.h. */
++
++/* Override any GCC internal prototype to avoid an error.
++ Use char because int might match the return type of a GCC
++ builtin and then its argument prototype would still apply. */
++#ifdef __cplusplus
++extern "C"
++#endif
++char c_plinit ();
++int
++main ()
++{
++return c_plinit ();
++ ;
++ return 0;
++}
++_ACEOF
++if ac_fn_c_try_link "$LINENO"; then :
++ ac_cv_lib_plplotd_c_plinit=yes
++else
++ ac_cv_lib_plplotd_c_plinit=no
++fi
++rm -f core conftest.err conftest.$ac_objext \
++ conftest$ac_exeext conftest.$ac_ext
++LIBS=$ac_check_lib_save_LIBS
++fi
++{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_plplotd_c_plinit" >&5
++$as_echo "$ac_cv_lib_plplotd_c_plinit" >&6; }
++if test "x$ac_cv_lib_plplotd_c_plinit" = x""yes; then :
++ cat >>confdefs.h <<_ACEOF
++#define HAVE_LIBPLPLOTD 1
++_ACEOF
++
++ LIBS="-lplplotd $LIBS"
++
++else
++ check_plplot_ok=no
++fi
++
++ PLPLOT_LIBS="-L -lplplotd"
++ fi
++fi
++
++LIBS="$OLIBS"
++if test x$check_plplot_ok = xyes; then
++
++
++
++$as_echo "#define HAVE_PLPLOT 1" >>confdefs.h
++
++fi
++
++
+ #
+ # Handle user hints
+ #
+@@ -15299,7 +15692,7 @@ fi
+
+
+
+-ac_config_files="$ac_config_files plplot/Makefile plplot/lib/Makefile nucleus/Makefile ajax/Makefile ajax/expat/Makefile ajax/zlib/Makefile ajax/core/Makefile ajax/graphics/Makefile ajax/ensembl/Makefile ajax/ajaxdb/Makefile ajax/acd/Makefile emboss/Makefile emboss/acd/Makefile test/Makefile test/data/Makefile test/embl/Makefile test/genbank/Makefile test/pir/Makefile test/swiss/Makefile test/swnew/Makefile test/testdb/Makefile emboss/data/Makefile emboss/data/AAINDEX/Makefile emboss/data/CODONS/Makefile emboss/data/REBASE/Makefile emboss/data/JASPAR_CORE/Makefile emboss/data/JASPAR_FAM/Makefile emboss/data/JASPAR_PHYLOFACTS/Makefile emboss/data/JASPAR_CNE/Makefile emboss/data/JASPAR_POLII/Makefile emboss/data/JASPAR_SPLICE/Makefile emboss/data/JASPAR_PBM/Makefile emboss/data/JASPAR_PBM_HLH/Makefile emboss/data/JASPAR_PBM_HOMEO/Makefile emboss/data/PRINTS/Makefile emboss/data/PROSITE/Makefile doc/Makefile doc/manuals/Makefile doc/tutorials/Makefile doc/programs/Makefile doc
/programs/html/Makefile doc/programs/text/Makefile jemboss/Makefile jemboss/images/Makefile jemboss/lib/Makefile jemboss/lib/axis/Makefile jemboss/resources/Makefile jemboss/utils/Makefile Makefile"
++ac_config_files="$ac_config_files nucleus/Makefile ajax/Makefile ajax/core/Makefile ajax/graphics/Makefile ajax/ensembl/Makefile ajax/ajaxdb/Makefile ajax/acd/Makefile emboss/Makefile emboss/acd/Makefile test/Makefile test/data/Makefile test/embl/Makefile test/genbank/Makefile test/pir/Makefile test/swiss/Makefile test/swnew/Makefile test/testdb/Makefile emboss/data/Makefile emboss/data/AAINDEX/Makefile emboss/data/CODONS/Makefile emboss/data/REBASE/Makefile emboss/data/JASPAR_CORE/Makefile emboss/data/JASPAR_FAM/Makefile emboss/data/JASPAR_PHYLOFACTS/Makefile emboss/data/JASPAR_CNE/Makefile emboss/data/JASPAR_POLII/Makefile emboss/data/JASPAR_SPLICE/Makefile emboss/data/JASPAR_PBM/Makefile emboss/data/JASPAR_PBM_HLH/Makefile emboss/data/JASPAR_PBM_HOMEO/Makefile emboss/data/PRINTS/Makefile emboss/data/PROSITE/Makefile doc/Makefile doc/manuals/Makefile doc/tutorials/Makefile doc/programs/Makefile doc/programs/html/Makefile doc/programs/text/Makefile jemboss/Makefile jemboss
/images/Makefile jemboss/lib/Makefile jemboss/lib/axis/Makefile jemboss/resources/Makefile jemboss/utils/Makefile Makefile"
+
+ cat >confcache <<\_ACEOF
+ # This file is a shell script that caches the results of configure
+@@ -16353,12 +16746,8 @@ do
+ case $ac_config_target in
+ "depfiles") CONFIG_COMMANDS="$CONFIG_COMMANDS depfiles" ;;
+ "libtool") CONFIG_COMMANDS="$CONFIG_COMMANDS libtool" ;;
+- "plplot/Makefile") CONFIG_FILES="$CONFIG_FILES plplot/Makefile" ;;
+- "plplot/lib/Makefile") CONFIG_FILES="$CONFIG_FILES plplot/lib/Makefile" ;;
+ "nucleus/Makefile") CONFIG_FILES="$CONFIG_FILES nucleus/Makefile" ;;
+ "ajax/Makefile") CONFIG_FILES="$CONFIG_FILES ajax/Makefile" ;;
+- "ajax/expat/Makefile") CONFIG_FILES="$CONFIG_FILES ajax/expat/Makefile" ;;
+- "ajax/zlib/Makefile") CONFIG_FILES="$CONFIG_FILES ajax/zlib/Makefile" ;;
+ "ajax/core/Makefile") CONFIG_FILES="$CONFIG_FILES ajax/core/Makefile" ;;
+ "ajax/graphics/Makefile") CONFIG_FILES="$CONFIG_FILES ajax/graphics/Makefile" ;;
+ "ajax/ensembl/Makefile") CONFIG_FILES="$CONFIG_FILES ajax/ensembl/Makefile" ;;
+diff -up EMBOSS-6.3.1/emboss/Makefile.am.system-plplot EMBOSS-6.3.1/emboss/Makefile.am
+--- EMBOSS-6.3.1/emboss/Makefile.am.system-plplot 2010-08-03 08:01:37.963254649 -0400
++++ EMBOSS-6.3.1/emboss/Makefile.am 2010-08-03 08:02:04.639273502 -0400
+@@ -79,14 +79,14 @@ wordcount wordfinder wordmatch wossname
+ yank
+
+ if !ESYSTEMLIBS
+-EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/zlib -I$(top_srcdir)/ajax/pcre
++EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/zlib -I$(top_srcdir)/ajax/pcre -I$(top_srcdir)/plplot
+ endif
+
+ INCLUDES = -I$(top_srcdir)/nucleus \
+- $(EXTRA_INCLUDES) \
++ $(EXTRA_INCLUDES) $(PLPLOT_CFLAGS) \
+ -I$(top_srcdir)/ajax/core -I$(top_srcdir)/ajax/graphics \
+ -I$(top_srcdir)/ajax/ensembl -I$(top_srcdir)/ajax/ajaxdb \
+- -I$(top_srcdir)/ajax/acd -I$(top_srcdir)/plplot
++ -I$(top_srcdir)/ajax/acd
+
+
+ aaindexextract_SOURCES = aaindexextract.c
+@@ -319,7 +319,7 @@ testplot_SOURCES = testplot.c
+ treetypedisplay_SOURCES = treetypedisplay.c
+
+ if !ESYSTEMLIBS
+-EXTRA_LDS = ../ajax/zlib/libezlib.la ../ajax/expat/libeexpat.la ../ajax/pcre/libepcre.la
++EXTRA_LDS = ../ajax/zlib/libezlib.la ../ajax/expat/libeexpat.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la
+ endif
+
+
+@@ -327,7 +327,7 @@ LDADD = ../nucleus/libnucleus.la ../ajax
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+ $(EXTRA_LDS) \
+- ../plplot/libeplplot.la \
++ $(PLPLOT_LIBS) \
+ $(XLIB)
+
+ pkgdata_DATA = emboss.default.template
+diff -up EMBOSS-6.3.1/emboss/Makefile.in.system-plplot EMBOSS-6.3.1/emboss/Makefile.in
+--- EMBOSS-6.3.1/emboss/Makefile.in.system-plplot 2010-08-03 08:01:37.968108260 -0400
++++ EMBOSS-6.3.1/emboss/Makefile.in 2010-08-03 08:02:28.757235378 -0400
+@@ -119,7 +119,8 @@ ACLOCAL_M4 = $(top_srcdir)/aclocal.m4
+ am__aclocal_m4_deps = $(top_srcdir)/m4/amd64.m4 \
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+- $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pngdriver.m4 \
++ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
++ $(top_srcdir)/m4/pngdriver.m4 \
+ $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+ $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+@@ -137,14 +138,14 @@ aaindexextract_DEPENDENCIES = ../nucleus
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_abiview_OBJECTS = abiview.$(OBJEXT)
+ abiview_OBJECTS = $(am_abiview_OBJECTS)
+ abiview_LDADD = $(LDADD)
+ abiview_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_acdc_OBJECTS = acdc.$(OBJEXT)
+ acdc_OBJECTS = $(am_acdc_OBJECTS)
+@@ -152,7 +153,7 @@ acdc_LDADD = $(LDADD)
+ acdc_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_acdgalaxy_OBJECTS = acdgalaxy.$(OBJEXT)
+ acdgalaxy_OBJECTS = $(am_acdgalaxy_OBJECTS)
+@@ -161,14 +162,14 @@ acdgalaxy_DEPENDENCIES = ../nucleus/libn
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_acdlog_OBJECTS = acdlog.$(OBJEXT)
+ acdlog_OBJECTS = $(am_acdlog_OBJECTS)
+ acdlog_LDADD = $(LDADD)
+ acdlog_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_acdpretty_OBJECTS = acdpretty.$(OBJEXT)
+ acdpretty_OBJECTS = $(am_acdpretty_OBJECTS)
+@@ -177,7 +178,7 @@ acdpretty_DEPENDENCIES = ../nucleus/libn
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_acdrelations_OBJECTS = acdrelations.$(OBJEXT)
+ acdrelations_OBJECTS = $(am_acdrelations_OBJECTS)
+ acdrelations_LDADD = $(LDADD)
+@@ -185,14 +186,14 @@ acdrelations_DEPENDENCIES = ../nucleus/l
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_acdtable_OBJECTS = acdtable.$(OBJEXT)
+ acdtable_OBJECTS = $(am_acdtable_OBJECTS)
+ acdtable_LDADD = $(LDADD)
+ acdtable_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_acdtrace_OBJECTS = acdtrace.$(OBJEXT)
+ acdtrace_OBJECTS = $(am_acdtrace_OBJECTS)
+@@ -200,7 +201,7 @@ acdtrace_LDADD = $(LDADD)
+ acdtrace_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_acdvalid_OBJECTS = acdvalid.$(OBJEXT)
+ acdvalid_OBJECTS = $(am_acdvalid_OBJECTS)
+@@ -208,7 +209,7 @@ acdvalid_LDADD = $(LDADD)
+ acdvalid_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_acdxsd_OBJECTS = acdxsd.$(OBJEXT)
+ acdxsd_OBJECTS = $(am_acdxsd_OBJECTS)
+@@ -216,7 +217,7 @@ acdxsd_LDADD = $(LDADD)
+ acdxsd_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_ajtest_OBJECTS = ajtest.$(OBJEXT)
+ ajtest_OBJECTS = $(am_ajtest_OBJECTS)
+@@ -224,7 +225,7 @@ ajtest_LDADD = $(LDADD)
+ ajtest_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_aligncopy_OBJECTS = aligncopy.$(OBJEXT)
+ aligncopy_OBJECTS = $(am_aligncopy_OBJECTS)
+@@ -233,7 +234,7 @@ aligncopy_DEPENDENCIES = ../nucleus/libn
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_aligncopypair_OBJECTS = aligncopypair.$(OBJEXT)
+ aligncopypair_OBJECTS = $(am_aligncopypair_OBJECTS)
+ aligncopypair_LDADD = $(LDADD)
+@@ -241,7 +242,7 @@ aligncopypair_DEPENDENCIES = ../nucleus/
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_antigenic_OBJECTS = antigenic.$(OBJEXT)
+ antigenic_OBJECTS = $(am_antigenic_OBJECTS)
+ antigenic_LDADD = $(LDADD)
+@@ -249,7 +250,7 @@ antigenic_DEPENDENCIES = ../nucleus/libn
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_backtranambig_OBJECTS = backtranambig.$(OBJEXT)
+ backtranambig_OBJECTS = $(am_backtranambig_OBJECTS)
+ backtranambig_LDADD = $(LDADD)
+@@ -257,7 +258,7 @@ backtranambig_DEPENDENCIES = ../nucleus/
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_backtranseq_OBJECTS = backtranseq.$(OBJEXT)
+ backtranseq_OBJECTS = $(am_backtranseq_OBJECTS)
+ backtranseq_LDADD = $(LDADD)
+@@ -265,14 +266,14 @@ backtranseq_DEPENDENCIES = ../nucleus/li
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_banana_OBJECTS = banana.$(OBJEXT)
+ banana_OBJECTS = $(am_banana_OBJECTS)
+ banana_LDADD = $(LDADD)
+ banana_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_biosed_OBJECTS = biosed.$(OBJEXT)
+ biosed_OBJECTS = $(am_biosed_OBJECTS)
+@@ -280,7 +281,7 @@ biosed_LDADD = $(LDADD)
+ biosed_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_btwisted_OBJECTS = btwisted.$(OBJEXT)
+ btwisted_OBJECTS = $(am_btwisted_OBJECTS)
+@@ -288,7 +289,7 @@ btwisted_LDADD = $(LDADD)
+ btwisted_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_cai_OBJECTS = cai.$(OBJEXT)
+ cai_OBJECTS = $(am_cai_OBJECTS)
+@@ -296,7 +297,7 @@ cai_LDADD = $(LDADD)
+ cai_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_chaos_OBJECTS = chaos.$(OBJEXT)
+ chaos_OBJECTS = $(am_chaos_OBJECTS)
+@@ -304,7 +305,7 @@ chaos_LDADD = $(LDADD)
+ chaos_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_charge_OBJECTS = charge.$(OBJEXT)
+ charge_OBJECTS = $(am_charge_OBJECTS)
+@@ -312,7 +313,7 @@ charge_LDADD = $(LDADD)
+ charge_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_checktrans_OBJECTS = checktrans.$(OBJEXT)
+ checktrans_OBJECTS = $(am_checktrans_OBJECTS)
+@@ -321,14 +322,14 @@ checktrans_DEPENDENCIES = ../nucleus/lib
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_chips_OBJECTS = chips.$(OBJEXT)
+ chips_OBJECTS = $(am_chips_OBJECTS)
+ chips_LDADD = $(LDADD)
+ chips_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_cirdna_OBJECTS = cirdna.$(OBJEXT)
+ cirdna_OBJECTS = $(am_cirdna_OBJECTS)
+@@ -336,7 +337,7 @@ cirdna_LDADD = $(LDADD)
+ cirdna_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_codcmp_OBJECTS = codcmp.$(OBJEXT)
+ codcmp_OBJECTS = $(am_codcmp_OBJECTS)
+@@ -344,7 +345,7 @@ codcmp_LDADD = $(LDADD)
+ codcmp_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ codcopy_SOURCES = codcopy.c
+ codcopy_OBJECTS = codcopy.$(OBJEXT)
+@@ -352,7 +353,7 @@ codcopy_LDADD = $(LDADD)
+ codcopy_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_coderet_OBJECTS = coderet.$(OBJEXT)
+ coderet_OBJECTS = $(am_coderet_OBJECTS)
+@@ -360,7 +361,7 @@ coderet_LDADD = $(LDADD)
+ coderet_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_complex_OBJECTS = complex.$(OBJEXT)
+ complex_OBJECTS = $(am_complex_OBJECTS)
+@@ -368,7 +369,7 @@ complex_LDADD = $(LDADD)
+ complex_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_compseq_OBJECTS = compseq.$(OBJEXT)
+ compseq_OBJECTS = $(am_compseq_OBJECTS)
+@@ -376,7 +377,7 @@ compseq_LDADD = $(LDADD)
+ compseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_cons_OBJECTS = cons.$(OBJEXT)
+ cons_OBJECTS = $(am_cons_OBJECTS)
+@@ -384,7 +385,7 @@ cons_LDADD = $(LDADD)
+ cons_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_consambig_OBJECTS = consambig.$(OBJEXT)
+ consambig_OBJECTS = $(am_consambig_OBJECTS)
+@@ -393,7 +394,7 @@ consambig_DEPENDENCIES = ../nucleus/libn
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_corbatest_OBJECTS = corbatest.$(OBJEXT)
+ corbatest_OBJECTS = $(am_corbatest_OBJECTS)
+ corbatest_LDADD = $(LDADD)
+@@ -401,14 +402,14 @@ corbatest_DEPENDENCIES = ../nucleus/libn
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_cpgplot_OBJECTS = cpgplot.$(OBJEXT)
+ cpgplot_OBJECTS = $(am_cpgplot_OBJECTS)
+ cpgplot_LDADD = $(LDADD)
+ cpgplot_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_cpgreport_OBJECTS = cpgreport.$(OBJEXT)
+ cpgreport_OBJECTS = $(am_cpgreport_OBJECTS)
+@@ -417,14 +418,14 @@ cpgreport_DEPENDENCIES = ../nucleus/libn
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_cusp_OBJECTS = cusp.$(OBJEXT)
+ cusp_OBJECTS = $(am_cusp_OBJECTS)
+ cusp_LDADD = $(LDADD)
+ cusp_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_cutgextract_OBJECTS = cutgextract.$(OBJEXT)
+ cutgextract_OBJECTS = $(am_cutgextract_OBJECTS)
+@@ -433,14 +434,14 @@ cutgextract_DEPENDENCIES = ../nucleus/li
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_cutseq_OBJECTS = cutseq.$(OBJEXT)
+ cutseq_OBJECTS = $(am_cutseq_OBJECTS)
+ cutseq_LDADD = $(LDADD)
+ cutseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_dan_OBJECTS = dan.$(OBJEXT)
+ dan_OBJECTS = $(am_dan_OBJECTS)
+@@ -448,7 +449,7 @@ dan_LDADD = $(LDADD)
+ dan_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_dbiblast_OBJECTS = dbiblast.$(OBJEXT)
+ dbiblast_OBJECTS = $(am_dbiblast_OBJECTS)
+@@ -456,7 +457,7 @@ dbiblast_LDADD = $(LDADD)
+ dbiblast_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_dbifasta_OBJECTS = dbifasta.$(OBJEXT)
+ dbifasta_OBJECTS = $(am_dbifasta_OBJECTS)
+@@ -464,7 +465,7 @@ dbifasta_LDADD = $(LDADD)
+ dbifasta_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_dbiflat_OBJECTS = dbiflat.$(OBJEXT)
+ dbiflat_OBJECTS = $(am_dbiflat_OBJECTS)
+@@ -472,7 +473,7 @@ dbiflat_LDADD = $(LDADD)
+ dbiflat_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_dbigcg_OBJECTS = dbigcg.$(OBJEXT)
+ dbigcg_OBJECTS = $(am_dbigcg_OBJECTS)
+@@ -480,7 +481,7 @@ dbigcg_LDADD = $(LDADD)
+ dbigcg_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_dbxfasta_OBJECTS = dbxfasta.$(OBJEXT)
+ dbxfasta_OBJECTS = $(am_dbxfasta_OBJECTS)
+@@ -488,7 +489,7 @@ dbxfasta_LDADD = $(LDADD)
+ dbxfasta_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_dbxflat_OBJECTS = dbxflat.$(OBJEXT)
+ dbxflat_OBJECTS = $(am_dbxflat_OBJECTS)
+@@ -496,7 +497,7 @@ dbxflat_LDADD = $(LDADD)
+ dbxflat_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_dbxgcg_OBJECTS = dbxgcg.$(OBJEXT)
+ dbxgcg_OBJECTS = $(am_dbxgcg_OBJECTS)
+@@ -504,7 +505,7 @@ dbxgcg_LDADD = $(LDADD)
+ dbxgcg_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_degapseq_OBJECTS = degapseq.$(OBJEXT)
+ degapseq_OBJECTS = $(am_degapseq_OBJECTS)
+@@ -512,7 +513,7 @@ degapseq_LDADD = $(LDADD)
+ degapseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_density_OBJECTS = density.$(OBJEXT)
+ density_OBJECTS = $(am_density_OBJECTS)
+@@ -520,7 +521,7 @@ density_LDADD = $(LDADD)
+ density_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_descseq_OBJECTS = descseq.$(OBJEXT)
+ descseq_OBJECTS = $(am_descseq_OBJECTS)
+@@ -528,7 +529,7 @@ descseq_LDADD = $(LDADD)
+ descseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_diffseq_OBJECTS = diffseq.$(OBJEXT)
+ diffseq_OBJECTS = $(am_diffseq_OBJECTS)
+@@ -536,7 +537,7 @@ diffseq_LDADD = $(LDADD)
+ diffseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_digest_OBJECTS = digest.$(OBJEXT)
+ digest_OBJECTS = $(am_digest_OBJECTS)
+@@ -544,7 +545,7 @@ digest_LDADD = $(LDADD)
+ digest_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_distmat_OBJECTS = distmat.$(OBJEXT)
+ distmat_OBJECTS = $(am_distmat_OBJECTS)
+@@ -552,7 +553,7 @@ distmat_LDADD = $(LDADD)
+ distmat_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ domtesta_SOURCES = domtesta.c
+ domtesta_OBJECTS = domtesta.$(OBJEXT)
+@@ -560,7 +561,7 @@ domtesta_LDADD = $(LDADD)
+ domtesta_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ domtestb_SOURCES = domtestb.c
+ domtestb_OBJECTS = domtestb.$(OBJEXT)
+@@ -568,7 +569,7 @@ domtestb_LDADD = $(LDADD)
+ domtestb_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ domtestc_SOURCES = domtestc.c
+ domtestc_OBJECTS = domtestc.$(OBJEXT)
+@@ -576,7 +577,7 @@ domtestc_LDADD = $(LDADD)
+ domtestc_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ domtestd_SOURCES = domtestd.c
+ domtestd_OBJECTS = domtestd.$(OBJEXT)
+@@ -584,7 +585,7 @@ domtestd_LDADD = $(LDADD)
+ domtestd_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_dotmatcher_OBJECTS = dotmatcher.$(OBJEXT)
+ dotmatcher_OBJECTS = $(am_dotmatcher_OBJECTS)
+@@ -593,14 +594,14 @@ dotmatcher_DEPENDENCIES = ../nucleus/lib
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_dotpath_OBJECTS = dotpath.$(OBJEXT)
+ dotpath_OBJECTS = $(am_dotpath_OBJECTS)
+ dotpath_LDADD = $(LDADD)
+ dotpath_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_dottup_OBJECTS = dottup.$(OBJEXT)
+ dottup_OBJECTS = $(am_dottup_OBJECTS)
+@@ -608,7 +609,7 @@ dottup_LDADD = $(LDADD)
+ dottup_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_dreg_OBJECTS = dreg.$(OBJEXT)
+ dreg_OBJECTS = $(am_dreg_OBJECTS)
+@@ -616,7 +617,7 @@ dreg_LDADD = $(LDADD)
+ dreg_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_edamclean_OBJECTS = edamclean.$(OBJEXT)
+ edamclean_OBJECTS = $(am_edamclean_OBJECTS)
+@@ -625,14 +626,14 @@ edamclean_DEPENDENCIES = ../nucleus/libn
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_edialign_OBJECTS = edialign.$(OBJEXT)
+ edialign_OBJECTS = $(am_edialign_OBJECTS)
+ edialign_LDADD = $(LDADD)
+ edialign_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_einverted_OBJECTS = einverted.$(OBJEXT)
+ einverted_OBJECTS = $(am_einverted_OBJECTS)
+@@ -641,7 +642,7 @@ einverted_DEPENDENCIES = ../nucleus/libn
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_embossdata_OBJECTS = embossdata.$(OBJEXT)
+ embossdata_OBJECTS = $(am_embossdata_OBJECTS)
+ embossdata_LDADD = $(LDADD)
+@@ -649,7 +650,7 @@ embossdata_DEPENDENCIES = ../nucleus/lib
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_embossversion_OBJECTS = embossversion.$(OBJEXT)
+ embossversion_OBJECTS = $(am_embossversion_OBJECTS)
+ embossversion_LDADD = $(LDADD)
+@@ -657,14 +658,14 @@ embossversion_DEPENDENCIES = ../nucleus/
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_emma_OBJECTS = emma.$(OBJEXT)
+ emma_OBJECTS = $(am_emma_OBJECTS)
+ emma_LDADD = $(LDADD)
+ emma_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_emowse_OBJECTS = emowse.$(OBJEXT)
+ emowse_OBJECTS = $(am_emowse_OBJECTS)
+@@ -672,7 +673,7 @@ emowse_LDADD = $(LDADD)
+ emowse_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_ensembltest_OBJECTS = ensembltest.$(OBJEXT)
+ ensembltest_OBJECTS = $(am_ensembltest_OBJECTS)
+@@ -681,14 +682,14 @@ ensembltest_DEPENDENCIES = ../nucleus/li
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_entrails_OBJECTS = entrails.$(OBJEXT)
+ entrails_OBJECTS = $(am_entrails_OBJECTS)
+ entrails_LDADD = $(LDADD)
+ entrails_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_entrailsbook_OBJECTS = entrailsbook.$(OBJEXT)
+ entrailsbook_OBJECTS = $(am_entrailsbook_OBJECTS)
+@@ -697,7 +698,7 @@ entrailsbook_DEPENDENCIES = ../nucleus/l
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_entrailshtml_OBJECTS = entrailshtml.$(OBJEXT)
+ entrailshtml_OBJECTS = $(am_entrailshtml_OBJECTS)
+ entrailshtml_LDADD = $(LDADD)
+@@ -705,7 +706,7 @@ entrailshtml_DEPENDENCIES = ../nucleus/l
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_entrailswiki_OBJECTS = entrailswiki.$(OBJEXT)
+ entrailswiki_OBJECTS = $(am_entrailswiki_OBJECTS)
+ entrailswiki_LDADD = $(LDADD)
+@@ -713,14 +714,14 @@ entrailswiki_DEPENDENCIES = ../nucleus/l
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_entret_OBJECTS = entret.$(OBJEXT)
+ entret_OBJECTS = $(am_entret_OBJECTS)
+ entret_LDADD = $(LDADD)
+ entret_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_epestfind_OBJECTS = epestfind.$(OBJEXT)
+ epestfind_OBJECTS = $(am_epestfind_OBJECTS)
+@@ -729,14 +730,14 @@ epestfind_DEPENDENCIES = ../nucleus/libn
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_eprimer3_OBJECTS = eprimer3.$(OBJEXT)
+ eprimer3_OBJECTS = $(am_eprimer3_OBJECTS)
+ eprimer3_LDADD = $(LDADD)
+ eprimer3_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_equicktandem_OBJECTS = equicktandem.$(OBJEXT)
+ equicktandem_OBJECTS = $(am_equicktandem_OBJECTS)
+@@ -745,7 +746,7 @@ equicktandem_DEPENDENCIES = ../nucleus/l
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_est2genome_OBJECTS = est2genome.$(OBJEXT)
+ est2genome_OBJECTS = $(am_est2genome_OBJECTS)
+ est2genome_LDADD = $(LDADD)
+@@ -753,14 +754,14 @@ est2genome_DEPENDENCIES = ../nucleus/lib
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_etandem_OBJECTS = etandem.$(OBJEXT)
+ etandem_OBJECTS = $(am_etandem_OBJECTS)
+ etandem_LDADD = $(LDADD)
+ etandem_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_extractalign_OBJECTS = extractalign.$(OBJEXT)
+ extractalign_OBJECTS = $(am_extractalign_OBJECTS)
+@@ -769,7 +770,7 @@ extractalign_DEPENDENCIES = ../nucleus/l
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_extractfeat_OBJECTS = extractfeat.$(OBJEXT)
+ extractfeat_OBJECTS = $(am_extractfeat_OBJECTS)
+ extractfeat_LDADD = $(LDADD)
+@@ -777,7 +778,7 @@ extractfeat_DEPENDENCIES = ../nucleus/li
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_extractseq_OBJECTS = extractseq.$(OBJEXT)
+ extractseq_OBJECTS = $(am_extractseq_OBJECTS)
+ extractseq_LDADD = $(LDADD)
+@@ -785,14 +786,14 @@ extractseq_DEPENDENCIES = ../nucleus/lib
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_featcopy_OBJECTS = featcopy.$(OBJEXT)
+ featcopy_OBJECTS = $(am_featcopy_OBJECTS)
+ featcopy_LDADD = $(LDADD)
+ featcopy_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_featreport_OBJECTS = featreport.$(OBJEXT)
+ featreport_OBJECTS = $(am_featreport_OBJECTS)
+@@ -801,14 +802,14 @@ featreport_DEPENDENCIES = ../nucleus/lib
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_findkm_OBJECTS = findkm.$(OBJEXT)
+ findkm_OBJECTS = $(am_findkm_OBJECTS)
+ findkm_LDADD = $(LDADD)
+ findkm_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_freak_OBJECTS = freak.$(OBJEXT)
+ freak_OBJECTS = $(am_freak_OBJECTS)
+@@ -816,7 +817,7 @@ freak_LDADD = $(LDADD)
+ freak_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_fuzznuc_OBJECTS = fuzznuc.$(OBJEXT)
+ fuzznuc_OBJECTS = $(am_fuzznuc_OBJECTS)
+@@ -824,7 +825,7 @@ fuzznuc_LDADD = $(LDADD)
+ fuzznuc_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_fuzzpro_OBJECTS = fuzzpro.$(OBJEXT)
+ fuzzpro_OBJECTS = $(am_fuzzpro_OBJECTS)
+@@ -832,7 +833,7 @@ fuzzpro_LDADD = $(LDADD)
+ fuzzpro_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_fuzztran_OBJECTS = fuzztran.$(OBJEXT)
+ fuzztran_OBJECTS = $(am_fuzztran_OBJECTS)
+@@ -840,7 +841,7 @@ fuzztran_LDADD = $(LDADD)
+ fuzztran_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_garnier_OBJECTS = garnier.$(OBJEXT)
+ garnier_OBJECTS = $(am_garnier_OBJECTS)
+@@ -848,7 +849,7 @@ garnier_LDADD = $(LDADD)
+ garnier_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_geecee_OBJECTS = geecee.$(OBJEXT)
+ geecee_OBJECTS = $(am_geecee_OBJECTS)
+@@ -856,7 +857,7 @@ geecee_LDADD = $(LDADD)
+ geecee_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_getorf_OBJECTS = getorf.$(OBJEXT)
+ getorf_OBJECTS = $(am_getorf_OBJECTS)
+@@ -864,7 +865,7 @@ getorf_LDADD = $(LDADD)
+ getorf_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_helixturnhelix_OBJECTS = helixturnhelix.$(OBJEXT)
+ helixturnhelix_OBJECTS = $(am_helixturnhelix_OBJECTS)
+@@ -873,7 +874,7 @@ helixturnhelix_DEPENDENCIES = ../nucleus
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_histogramtest_OBJECTS = histogramtest.$(OBJEXT)
+ histogramtest_OBJECTS = $(am_histogramtest_OBJECTS)
+ histogramtest_LDADD = $(LDADD)
+@@ -881,14 +882,14 @@ histogramtest_DEPENDENCIES = ../nucleus/
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_hmoment_OBJECTS = hmoment.$(OBJEXT)
+ hmoment_OBJECTS = $(am_hmoment_OBJECTS)
+ hmoment_LDADD = $(LDADD)
+ hmoment_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_iep_OBJECTS = iep.$(OBJEXT)
+ iep_OBJECTS = $(am_iep_OBJECTS)
+@@ -896,7 +897,7 @@ iep_LDADD = $(LDADD)
+ iep_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_infoalign_OBJECTS = infoalign.$(OBJEXT)
+ infoalign_OBJECTS = $(am_infoalign_OBJECTS)
+@@ -905,14 +906,14 @@ infoalign_DEPENDENCIES = ../nucleus/libn
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_infobase_OBJECTS = infobase.$(OBJEXT)
+ infobase_OBJECTS = $(am_infobase_OBJECTS)
+ infobase_LDADD = $(LDADD)
+ infobase_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_inforesidue_OBJECTS = inforesidue.$(OBJEXT)
+ inforesidue_OBJECTS = $(am_inforesidue_OBJECTS)
+@@ -921,14 +922,14 @@ inforesidue_DEPENDENCIES = ../nucleus/li
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_infoseq_OBJECTS = infoseq.$(OBJEXT)
+ infoseq_OBJECTS = $(am_infoseq_OBJECTS)
+ infoseq_LDADD = $(LDADD)
+ infoseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_intconv_OBJECTS = intconv.$(OBJEXT)
+ intconv_OBJECTS = $(am_intconv_OBJECTS)
+@@ -936,7 +937,7 @@ intconv_LDADD = $(LDADD)
+ intconv_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_isochore_OBJECTS = isochore.$(OBJEXT)
+ isochore_OBJECTS = $(am_isochore_OBJECTS)
+@@ -944,7 +945,7 @@ isochore_LDADD = $(LDADD)
+ isochore_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_jaspextract_OBJECTS = jaspextract.$(OBJEXT)
+ jaspextract_OBJECTS = $(am_jaspextract_OBJECTS)
+@@ -953,14 +954,14 @@ jaspextract_DEPENDENCIES = ../nucleus/li
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_jaspscan_OBJECTS = jaspscan.$(OBJEXT)
+ jaspscan_OBJECTS = $(am_jaspscan_OBJECTS)
+ jaspscan_LDADD = $(LDADD)
+ jaspscan_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_jembossctl_OBJECTS = jembossctl.$(OBJEXT)
+ jembossctl_OBJECTS = $(am_jembossctl_OBJECTS)
+@@ -969,14 +970,14 @@ jembossctl_DEPENDENCIES = ../nucleus/lib
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_lindna_OBJECTS = lindna.$(OBJEXT)
+ lindna_OBJECTS = $(am_lindna_OBJECTS)
+ lindna_LDADD = $(LDADD)
+ lindna_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_listor_OBJECTS = listor.$(OBJEXT)
+ listor_OBJECTS = $(am_listor_OBJECTS)
+@@ -984,7 +985,7 @@ listor_LDADD = $(LDADD)
+ listor_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ makenucseq_SOURCES = makenucseq.c
+ makenucseq_OBJECTS = makenucseq.$(OBJEXT)
+@@ -993,7 +994,7 @@ makenucseq_DEPENDENCIES = ../nucleus/lib
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ makeprotseq_SOURCES = makeprotseq.c
+ makeprotseq_OBJECTS = makeprotseq.$(OBJEXT)
+ makeprotseq_LDADD = $(LDADD)
+@@ -1001,14 +1002,14 @@ makeprotseq_DEPENDENCIES = ../nucleus/li
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_marscan_OBJECTS = marscan.$(OBJEXT)
+ marscan_OBJECTS = $(am_marscan_OBJECTS)
+ marscan_LDADD = $(LDADD)
+ marscan_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_martattributes_OBJECTS = martattributes.$(OBJEXT)
+ martattributes_OBJECTS = $(am_martattributes_OBJECTS)
+@@ -1017,7 +1018,7 @@ martattributes_DEPENDENCIES = ../nucleus
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_martdatasets_OBJECTS = martdatasets.$(OBJEXT)
+ martdatasets_OBJECTS = $(am_martdatasets_OBJECTS)
+ martdatasets_LDADD = $(LDADD)
+@@ -1025,7 +1026,7 @@ martdatasets_DEPENDENCIES = ../nucleus/l
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_martfilters_OBJECTS = martfilters.$(OBJEXT)
+ martfilters_OBJECTS = $(am_martfilters_OBJECTS)
+ martfilters_LDADD = $(LDADD)
+@@ -1033,7 +1034,7 @@ martfilters_DEPENDENCIES = ../nucleus/li
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_martquery_OBJECTS = martquery.$(OBJEXT)
+ martquery_OBJECTS = $(am_martquery_OBJECTS)
+ martquery_LDADD = $(LDADD)
+@@ -1041,7 +1042,7 @@ martquery_DEPENDENCIES = ../nucleus/libn
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_martregistry_OBJECTS = martregistry.$(OBJEXT)
+ martregistry_OBJECTS = $(am_martregistry_OBJECTS)
+ martregistry_LDADD = $(LDADD)
+@@ -1049,14 +1050,14 @@ martregistry_DEPENDENCIES = ../nucleus/l
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_martseqs_OBJECTS = martseqs.$(OBJEXT)
+ martseqs_OBJECTS = $(am_martseqs_OBJECTS)
+ martseqs_LDADD = $(LDADD)
+ martseqs_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_maskambignuc_OBJECTS = maskambignuc.$(OBJEXT)
+ maskambignuc_OBJECTS = $(am_maskambignuc_OBJECTS)
+@@ -1065,7 +1066,7 @@ maskambignuc_DEPENDENCIES = ../nucleus/l
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_maskambigprot_OBJECTS = maskambigprot.$(OBJEXT)
+ maskambigprot_OBJECTS = $(am_maskambigprot_OBJECTS)
+ maskambigprot_LDADD = $(LDADD)
+@@ -1073,14 +1074,14 @@ maskambigprot_DEPENDENCIES = ../nucleus/
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_maskfeat_OBJECTS = maskfeat.$(OBJEXT)
+ maskfeat_OBJECTS = $(am_maskfeat_OBJECTS)
+ maskfeat_LDADD = $(LDADD)
+ maskfeat_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_maskseq_OBJECTS = maskseq.$(OBJEXT)
+ maskseq_OBJECTS = $(am_maskseq_OBJECTS)
+@@ -1088,7 +1089,7 @@ maskseq_LDADD = $(LDADD)
+ maskseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_matcher_OBJECTS = matcher.$(OBJEXT)
+ matcher_OBJECTS = $(am_matcher_OBJECTS)
+@@ -1096,7 +1097,7 @@ matcher_LDADD = $(LDADD)
+ matcher_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_megamerger_OBJECTS = megamerger.$(OBJEXT)
+ megamerger_OBJECTS = $(am_megamerger_OBJECTS)
+@@ -1105,14 +1106,14 @@ megamerger_DEPENDENCIES = ../nucleus/lib
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_merger_OBJECTS = merger.$(OBJEXT)
+ merger_OBJECTS = $(am_merger_OBJECTS)
+ merger_LDADD = $(LDADD)
+ merger_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_msbar_OBJECTS = msbar.$(OBJEXT)
+ msbar_OBJECTS = $(am_msbar_OBJECTS)
+@@ -1120,7 +1121,7 @@ msbar_LDADD = $(LDADD)
+ msbar_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_mwcontam_OBJECTS = mwcontam.$(OBJEXT)
+ mwcontam_OBJECTS = $(am_mwcontam_OBJECTS)
+@@ -1128,7 +1129,7 @@ mwcontam_LDADD = $(LDADD)
+ mwcontam_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_mwfilter_OBJECTS = mwfilter.$(OBJEXT)
+ mwfilter_OBJECTS = $(am_mwfilter_OBJECTS)
+@@ -1136,7 +1137,7 @@ mwfilter_LDADD = $(LDADD)
+ mwfilter_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_needle_OBJECTS = needle.$(OBJEXT)
+ needle_OBJECTS = $(am_needle_OBJECTS)
+@@ -1144,7 +1145,7 @@ needle_LDADD = $(LDADD)
+ needle_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_needleall_OBJECTS = needleall.$(OBJEXT)
+ needleall_OBJECTS = $(am_needleall_OBJECTS)
+@@ -1153,14 +1154,14 @@ needleall_DEPENDENCIES = ../nucleus/libn
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_newcoils_OBJECTS = newcoils.$(OBJEXT)
+ newcoils_OBJECTS = $(am_newcoils_OBJECTS)
+ newcoils_LDADD = $(LDADD)
+ newcoils_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_newcpgreport_OBJECTS = newcpgreport.$(OBJEXT)
+ newcpgreport_OBJECTS = $(am_newcpgreport_OBJECTS)
+@@ -1169,7 +1170,7 @@ newcpgreport_DEPENDENCIES = ../nucleus/l
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_newcpgseek_OBJECTS = newcpgseek.$(OBJEXT)
+ newcpgseek_OBJECTS = $(am_newcpgseek_OBJECTS)
+ newcpgseek_LDADD = $(LDADD)
+@@ -1177,14 +1178,14 @@ newcpgseek_DEPENDENCIES = ../nucleus/lib
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_newseq_OBJECTS = newseq.$(OBJEXT)
+ newseq_OBJECTS = $(am_newseq_OBJECTS)
+ newseq_LDADD = $(LDADD)
+ newseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_nohtml_OBJECTS = nohtml.$(OBJEXT)
+ nohtml_OBJECTS = $(am_nohtml_OBJECTS)
+@@ -1192,7 +1193,7 @@ nohtml_LDADD = $(LDADD)
+ nohtml_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_noreturn_OBJECTS = noreturn.$(OBJEXT)
+ noreturn_OBJECTS = $(am_noreturn_OBJECTS)
+@@ -1200,7 +1201,7 @@ noreturn_LDADD = $(LDADD)
+ noreturn_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_nospace_OBJECTS = nospace.$(OBJEXT)
+ nospace_OBJECTS = $(am_nospace_OBJECTS)
+@@ -1208,7 +1209,7 @@ nospace_LDADD = $(LDADD)
+ nospace_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_notab_OBJECTS = notab.$(OBJEXT)
+ notab_OBJECTS = $(am_notab_OBJECTS)
+@@ -1216,7 +1217,7 @@ notab_LDADD = $(LDADD)
+ notab_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_notseq_OBJECTS = notseq.$(OBJEXT)
+ notseq_OBJECTS = $(am_notseq_OBJECTS)
+@@ -1224,7 +1225,7 @@ notseq_LDADD = $(LDADD)
+ notseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_nthseq_OBJECTS = nthseq.$(OBJEXT)
+ nthseq_OBJECTS = $(am_nthseq_OBJECTS)
+@@ -1232,7 +1233,7 @@ nthseq_LDADD = $(LDADD)
+ nthseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_nthseqset_OBJECTS = nthseqset.$(OBJEXT)
+ nthseqset_OBJECTS = $(am_nthseqset_OBJECTS)
+@@ -1241,14 +1242,14 @@ nthseqset_DEPENDENCIES = ../nucleus/libn
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_octanol_OBJECTS = octanol.$(OBJEXT)
+ octanol_OBJECTS = $(am_octanol_OBJECTS)
+ octanol_LDADD = $(LDADD)
+ octanol_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_oddcomp_OBJECTS = oddcomp.$(OBJEXT)
+ oddcomp_OBJECTS = $(am_oddcomp_OBJECTS)
+@@ -1256,7 +1257,7 @@ oddcomp_LDADD = $(LDADD)
+ oddcomp_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_origsplitter_OBJECTS = origsplitter.$(OBJEXT)
+ origsplitter_OBJECTS = $(am_origsplitter_OBJECTS)
+@@ -1265,7 +1266,7 @@ origsplitter_DEPENDENCIES = ../nucleus/l
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_origunion_OBJECTS = origunion.$(OBJEXT)
+ origunion_OBJECTS = $(am_origunion_OBJECTS)
+ origunion_LDADD = $(LDADD)
+@@ -1273,7 +1274,7 @@ origunion_DEPENDENCIES = ../nucleus/libn
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_palindrome_OBJECTS = palindrome.$(OBJEXT)
+ palindrome_OBJECTS = $(am_palindrome_OBJECTS)
+ palindrome_LDADD = $(LDADD)
+@@ -1281,14 +1282,14 @@ palindrome_DEPENDENCIES = ../nucleus/lib
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_pasteseq_OBJECTS = pasteseq.$(OBJEXT)
+ pasteseq_OBJECTS = $(am_pasteseq_OBJECTS)
+ pasteseq_LDADD = $(LDADD)
+ pasteseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_patmatdb_OBJECTS = patmatdb.$(OBJEXT)
+ patmatdb_OBJECTS = $(am_patmatdb_OBJECTS)
+@@ -1296,7 +1297,7 @@ patmatdb_LDADD = $(LDADD)
+ patmatdb_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_patmatmotifs_OBJECTS = patmatmotifs.$(OBJEXT)
+ patmatmotifs_OBJECTS = $(am_patmatmotifs_OBJECTS)
+@@ -1305,7 +1306,7 @@ patmatmotifs_DEPENDENCIES = ../nucleus/l
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_patmattest_OBJECTS = patmattest.$(OBJEXT)
+ patmattest_OBJECTS = $(am_patmattest_OBJECTS)
+ patmattest_LDADD = $(LDADD)
+@@ -1313,14 +1314,14 @@ patmattest_DEPENDENCIES = ../nucleus/lib
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_pepcoil_OBJECTS = pepcoil.$(OBJEXT)
+ pepcoil_OBJECTS = $(am_pepcoil_OBJECTS)
+ pepcoil_LDADD = $(LDADD)
+ pepcoil_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_pepinfo_OBJECTS = pepinfo.$(OBJEXT)
+ pepinfo_OBJECTS = $(am_pepinfo_OBJECTS)
+@@ -1328,7 +1329,7 @@ pepinfo_LDADD = $(LDADD)
+ pepinfo_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_pepnet_OBJECTS = pepnet.$(OBJEXT)
+ pepnet_OBJECTS = $(am_pepnet_OBJECTS)
+@@ -1336,7 +1337,7 @@ pepnet_LDADD = $(LDADD)
+ pepnet_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_pepstats_OBJECTS = pepstats.$(OBJEXT)
+ pepstats_OBJECTS = $(am_pepstats_OBJECTS)
+@@ -1344,7 +1345,7 @@ pepstats_LDADD = $(LDADD)
+ pepstats_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_pepwheel_OBJECTS = pepwheel.$(OBJEXT)
+ pepwheel_OBJECTS = $(am_pepwheel_OBJECTS)
+@@ -1352,7 +1353,7 @@ pepwheel_LDADD = $(LDADD)
+ pepwheel_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_pepwindow_OBJECTS = pepwindow.$(OBJEXT)
+ pepwindow_OBJECTS = $(am_pepwindow_OBJECTS)
+@@ -1361,7 +1362,7 @@ pepwindow_DEPENDENCIES = ../nucleus/libn
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_pepwindowall_OBJECTS = pepwindowall.$(OBJEXT)
+ pepwindowall_OBJECTS = $(am_pepwindowall_OBJECTS)
+ pepwindowall_LDADD = $(LDADD)
+@@ -1369,14 +1370,14 @@ pepwindowall_DEPENDENCIES = ../nucleus/l
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_plotcon_OBJECTS = plotcon.$(OBJEXT)
+ plotcon_OBJECTS = $(am_plotcon_OBJECTS)
+ plotcon_LDADD = $(LDADD)
+ plotcon_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_plotorf_OBJECTS = plotorf.$(OBJEXT)
+ plotorf_OBJECTS = $(am_plotorf_OBJECTS)
+@@ -1384,7 +1385,7 @@ plotorf_LDADD = $(LDADD)
+ plotorf_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_polydot_OBJECTS = polydot.$(OBJEXT)
+ polydot_OBJECTS = $(am_polydot_OBJECTS)
+@@ -1392,7 +1393,7 @@ polydot_LDADD = $(LDADD)
+ polydot_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_preg_OBJECTS = preg.$(OBJEXT)
+ preg_OBJECTS = $(am_preg_OBJECTS)
+@@ -1400,7 +1401,7 @@ preg_LDADD = $(LDADD)
+ preg_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_prettyplot_OBJECTS = prettyplot.$(OBJEXT)
+ prettyplot_OBJECTS = $(am_prettyplot_OBJECTS)
+@@ -1409,7 +1410,7 @@ prettyplot_DEPENDENCIES = ../nucleus/lib
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_prettyseq_OBJECTS = prettyseq.$(OBJEXT)
+ prettyseq_OBJECTS = $(am_prettyseq_OBJECTS)
+ prettyseq_LDADD = $(LDADD)
+@@ -1417,14 +1418,14 @@ prettyseq_DEPENDENCIES = ../nucleus/libn
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_prima_OBJECTS = prima.$(OBJEXT)
+ prima_OBJECTS = $(am_prima_OBJECTS)
+ prima_LDADD = $(LDADD)
+ prima_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_primers_OBJECTS = primers.$(OBJEXT)
+ primers_OBJECTS = $(am_primers_OBJECTS)
+@@ -1432,7 +1433,7 @@ primers_LDADD = $(LDADD)
+ primers_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_primersearch_OBJECTS = primersearch.$(OBJEXT)
+ primersearch_OBJECTS = $(am_primersearch_OBJECTS)
+@@ -1441,7 +1442,7 @@ primersearch_DEPENDENCIES = ../nucleus/l
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_printsextract_OBJECTS = printsextract.$(OBJEXT)
+ printsextract_OBJECTS = $(am_printsextract_OBJECTS)
+ printsextract_LDADD = $(LDADD)
+@@ -1449,14 +1450,14 @@ printsextract_DEPENDENCIES = ../nucleus/
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_profit_OBJECTS = profit.$(OBJEXT)
+ profit_OBJECTS = $(am_profit_OBJECTS)
+ profit_LDADD = $(LDADD)
+ profit_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_prophecy_OBJECTS = prophecy.$(OBJEXT)
+ prophecy_OBJECTS = $(am_prophecy_OBJECTS)
+@@ -1464,7 +1465,7 @@ prophecy_LDADD = $(LDADD)
+ prophecy_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_prophet_OBJECTS = prophet.$(OBJEXT)
+ prophet_OBJECTS = $(am_prophet_OBJECTS)
+@@ -1472,7 +1473,7 @@ prophet_LDADD = $(LDADD)
+ prophet_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_prosextract_OBJECTS = prosextract.$(OBJEXT)
+ prosextract_OBJECTS = $(am_prosextract_OBJECTS)
+@@ -1481,14 +1482,14 @@ prosextract_DEPENDENCIES = ../nucleus/li
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_pscan_OBJECTS = pscan.$(OBJEXT)
+ pscan_OBJECTS = $(am_pscan_OBJECTS)
+ pscan_LDADD = $(LDADD)
+ pscan_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_psiphi_OBJECTS = psiphi.$(OBJEXT)
+ psiphi_OBJECTS = $(am_psiphi_OBJECTS)
+@@ -1496,7 +1497,7 @@ psiphi_LDADD = $(LDADD)
+ psiphi_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_rebaseextract_OBJECTS = rebaseextract.$(OBJEXT)
+ rebaseextract_OBJECTS = $(am_rebaseextract_OBJECTS)
+@@ -1505,14 +1506,14 @@ rebaseextract_DEPENDENCIES = ../nucleus/
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_recoder_OBJECTS = recoder.$(OBJEXT)
+ recoder_OBJECTS = $(am_recoder_OBJECTS)
+ recoder_LDADD = $(LDADD)
+ recoder_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_redata_OBJECTS = redata.$(OBJEXT)
+ redata_OBJECTS = $(am_redata_OBJECTS)
+@@ -1520,7 +1521,7 @@ redata_LDADD = $(LDADD)
+ redata_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_remap_OBJECTS = remap.$(OBJEXT)
+ remap_OBJECTS = $(am_remap_OBJECTS)
+@@ -1528,7 +1529,7 @@ remap_LDADD = $(LDADD)
+ remap_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_restover_OBJECTS = restover.$(OBJEXT)
+ restover_OBJECTS = $(am_restover_OBJECTS)
+@@ -1536,7 +1537,7 @@ restover_LDADD = $(LDADD)
+ restover_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_restrict_OBJECTS = restrict.$(OBJEXT)
+ restrict_OBJECTS = $(am_restrict_OBJECTS)
+@@ -1544,7 +1545,7 @@ restrict_LDADD = $(LDADD)
+ restrict_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_revseq_OBJECTS = revseq.$(OBJEXT)
+ revseq_OBJECTS = $(am_revseq_OBJECTS)
+@@ -1552,7 +1553,7 @@ revseq_LDADD = $(LDADD)
+ revseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_seealso_OBJECTS = seealso.$(OBJEXT)
+ seealso_OBJECTS = $(am_seealso_OBJECTS)
+@@ -1560,7 +1561,7 @@ seealso_LDADD = $(LDADD)
+ seealso_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_seqinfo_OBJECTS = seqinfo.$(OBJEXT)
+ seqinfo_OBJECTS = $(am_seqinfo_OBJECTS)
+@@ -1568,7 +1569,7 @@ seqinfo_LDADD = $(LDADD)
+ seqinfo_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_seqmatchall_OBJECTS = seqmatchall.$(OBJEXT)
+ seqmatchall_OBJECTS = $(am_seqmatchall_OBJECTS)
+@@ -1577,14 +1578,14 @@ seqmatchall_DEPENDENCIES = ../nucleus/li
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_seqret_OBJECTS = seqret.$(OBJEXT)
+ seqret_OBJECTS = $(am_seqret_OBJECTS)
+ seqret_LDADD = $(LDADD)
+ seqret_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_seqretall_OBJECTS = seqretall.$(OBJEXT)
+ seqretall_OBJECTS = $(am_seqretall_OBJECTS)
+@@ -1593,7 +1594,7 @@ seqretall_DEPENDENCIES = ../nucleus/libn
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_seqretallfeat_OBJECTS = seqretallfeat.$(OBJEXT)
+ seqretallfeat_OBJECTS = $(am_seqretallfeat_OBJECTS)
+ seqretallfeat_LDADD = $(LDADD)
+@@ -1601,7 +1602,7 @@ seqretallfeat_DEPENDENCIES = ../nucleus/
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_seqretset_OBJECTS = seqretset.$(OBJEXT)
+ seqretset_OBJECTS = $(am_seqretset_OBJECTS)
+ seqretset_LDADD = $(LDADD)
+@@ -1609,7 +1610,7 @@ seqretset_DEPENDENCIES = ../nucleus/libn
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_seqretsetall_OBJECTS = seqretsetall.$(OBJEXT)
+ seqretsetall_OBJECTS = $(am_seqretsetall_OBJECTS)
+ seqretsetall_LDADD = $(LDADD)
+@@ -1617,7 +1618,7 @@ seqretsetall_DEPENDENCIES = ../nucleus/l
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_seqretsingle_OBJECTS = seqretsingle.$(OBJEXT)
+ seqretsingle_OBJECTS = $(am_seqretsingle_OBJECTS)
+ seqretsingle_LDADD = $(LDADD)
+@@ -1625,7 +1626,7 @@ seqretsingle_DEPENDENCIES = ../nucleus/l
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_seqretsplit_OBJECTS = seqretsplit.$(OBJEXT)
+ seqretsplit_OBJECTS = $(am_seqretsplit_OBJECTS)
+ seqretsplit_LDADD = $(LDADD)
+@@ -1633,7 +1634,7 @@ seqretsplit_DEPENDENCIES = ../nucleus/li
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_seqrettype_OBJECTS = seqrettype.$(OBJEXT)
+ seqrettype_OBJECTS = $(am_seqrettype_OBJECTS)
+ seqrettype_LDADD = $(LDADD)
+@@ -1641,7 +1642,7 @@ seqrettype_DEPENDENCIES = ../nucleus/lib
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_showalign_OBJECTS = showalign.$(OBJEXT)
+ showalign_OBJECTS = $(am_showalign_OBJECTS)
+ showalign_LDADD = $(LDADD)
+@@ -1649,14 +1650,14 @@ showalign_DEPENDENCIES = ../nucleus/libn
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_showdb_OBJECTS = showdb.$(OBJEXT)
+ showdb_OBJECTS = $(am_showdb_OBJECTS)
+ showdb_LDADD = $(LDADD)
+ showdb_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_showfeat_OBJECTS = showfeat.$(OBJEXT)
+ showfeat_OBJECTS = $(am_showfeat_OBJECTS)
+@@ -1664,7 +1665,7 @@ showfeat_LDADD = $(LDADD)
+ showfeat_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_showorf_OBJECTS = showorf.$(OBJEXT)
+ showorf_OBJECTS = $(am_showorf_OBJECTS)
+@@ -1672,7 +1673,7 @@ showorf_LDADD = $(LDADD)
+ showorf_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_showpep_OBJECTS = showpep.$(OBJEXT)
+ showpep_OBJECTS = $(am_showpep_OBJECTS)
+@@ -1680,7 +1681,7 @@ showpep_LDADD = $(LDADD)
+ showpep_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_showseq_OBJECTS = showseq.$(OBJEXT)
+ showseq_OBJECTS = $(am_showseq_OBJECTS)
+@@ -1688,7 +1689,7 @@ showseq_LDADD = $(LDADD)
+ showseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_shuffleseq_OBJECTS = shuffleseq.$(OBJEXT)
+ shuffleseq_OBJECTS = $(am_shuffleseq_OBJECTS)
+@@ -1697,7 +1698,7 @@ shuffleseq_DEPENDENCIES = ../nucleus/lib
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_sigcleave_OBJECTS = sigcleave.$(OBJEXT)
+ sigcleave_OBJECTS = $(am_sigcleave_OBJECTS)
+ sigcleave_LDADD = $(LDADD)
+@@ -1705,14 +1706,14 @@ sigcleave_DEPENDENCIES = ../nucleus/libn
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_silent_OBJECTS = silent.$(OBJEXT)
+ silent_OBJECTS = $(am_silent_OBJECTS)
+ silent_LDADD = $(LDADD)
+ silent_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_sirna_OBJECTS = sirna.$(OBJEXT)
+ sirna_OBJECTS = $(am_sirna_OBJECTS)
+@@ -1720,7 +1721,7 @@ sirna_LDADD = $(LDADD)
+ sirna_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_sixpack_OBJECTS = sixpack.$(OBJEXT)
+ sixpack_OBJECTS = $(am_sixpack_OBJECTS)
+@@ -1728,7 +1729,7 @@ sixpack_LDADD = $(LDADD)
+ sixpack_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_sizeseq_OBJECTS = sizeseq.$(OBJEXT)
+ sizeseq_OBJECTS = $(am_sizeseq_OBJECTS)
+@@ -1736,7 +1737,7 @@ sizeseq_LDADD = $(LDADD)
+ sizeseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_skipredundant_OBJECTS = skipredundant.$(OBJEXT)
+ skipredundant_OBJECTS = $(am_skipredundant_OBJECTS)
+@@ -1745,14 +1746,14 @@ skipredundant_DEPENDENCIES = ../nucleus/
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_skipseq_OBJECTS = skipseq.$(OBJEXT)
+ skipseq_OBJECTS = $(am_skipseq_OBJECTS)
+ skipseq_LDADD = $(LDADD)
+ skipseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ splitsource_SOURCES = splitsource.c
+ splitsource_OBJECTS = splitsource.$(OBJEXT)
+@@ -1761,14 +1762,14 @@ splitsource_DEPENDENCIES = ../nucleus/li
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_splitter_OBJECTS = splitter.$(OBJEXT)
+ splitter_OBJECTS = $(am_splitter_OBJECTS)
+ splitter_LDADD = $(LDADD)
+ splitter_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_sqltest_OBJECTS = sqltest.$(OBJEXT)
+ sqltest_OBJECTS = $(am_sqltest_OBJECTS)
+@@ -1776,7 +1777,7 @@ sqltest_LDADD = $(LDADD)
+ sqltest_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_stretcher_OBJECTS = stretcher.$(OBJEXT)
+ stretcher_OBJECTS = $(am_stretcher_OBJECTS)
+@@ -1785,7 +1786,7 @@ stretcher_DEPENDENCIES = ../nucleus/libn
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_stssearch_OBJECTS = stssearch.$(OBJEXT)
+ stssearch_OBJECTS = $(am_stssearch_OBJECTS)
+ stssearch_LDADD = $(LDADD)
+@@ -1793,7 +1794,7 @@ stssearch_DEPENDENCIES = ../nucleus/libn
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_supermatcher_OBJECTS = supermatcher.$(OBJEXT)
+ supermatcher_OBJECTS = $(am_supermatcher_OBJECTS)
+ supermatcher_LDADD = $(LDADD)
+@@ -1801,14 +1802,14 @@ supermatcher_DEPENDENCIES = ../nucleus/l
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_syco_OBJECTS = syco.$(OBJEXT)
+ syco_OBJECTS = $(am_syco_OBJECTS)
+ syco_LDADD = $(LDADD)
+ syco_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_tcode_OBJECTS = tcode.$(OBJEXT)
+ tcode_OBJECTS = $(am_tcode_OBJECTS)
+@@ -1816,7 +1817,7 @@ tcode_LDADD = $(LDADD)
+ tcode_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_testplot_OBJECTS = testplot.$(OBJEXT)
+ testplot_OBJECTS = $(am_testplot_OBJECTS)
+@@ -1824,7 +1825,7 @@ testplot_LDADD = $(LDADD)
+ testplot_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_textsearch_OBJECTS = textsearch.$(OBJEXT)
+ textsearch_OBJECTS = $(am_textsearch_OBJECTS)
+@@ -1833,7 +1834,7 @@ textsearch_DEPENDENCIES = ../nucleus/lib
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_tfextract_OBJECTS = tfextract.$(OBJEXT)
+ tfextract_OBJECTS = $(am_tfextract_OBJECTS)
+ tfextract_LDADD = $(LDADD)
+@@ -1841,14 +1842,14 @@ tfextract_DEPENDENCIES = ../nucleus/libn
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_tfm_OBJECTS = tfm.$(OBJEXT)
+ tfm_OBJECTS = $(am_tfm_OBJECTS)
+ tfm_LDADD = $(LDADD)
+ tfm_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_tfscan_OBJECTS = tfscan.$(OBJEXT)
+ tfscan_OBJECTS = $(am_tfscan_OBJECTS)
+@@ -1856,7 +1857,7 @@ tfscan_LDADD = $(LDADD)
+ tfscan_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_tmap_OBJECTS = tmap.$(OBJEXT)
+ tmap_OBJECTS = $(am_tmap_OBJECTS)
+@@ -1864,7 +1865,7 @@ tmap_LDADD = $(LDADD)
+ tmap_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_tranalign_OBJECTS = tranalign.$(OBJEXT)
+ tranalign_OBJECTS = $(am_tranalign_OBJECTS)
+@@ -1873,14 +1874,14 @@ tranalign_DEPENDENCIES = ../nucleus/libn
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_transeq_OBJECTS = transeq.$(OBJEXT)
+ transeq_OBJECTS = $(am_transeq_OBJECTS)
+ transeq_LDADD = $(LDADD)
+ transeq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_treetypedisplay_OBJECTS = treetypedisplay.$(OBJEXT)
+ treetypedisplay_OBJECTS = $(am_treetypedisplay_OBJECTS)
+@@ -1889,14 +1890,14 @@ treetypedisplay_DEPENDENCIES = ../nucleu
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_trimest_OBJECTS = trimest.$(OBJEXT)
+ trimest_OBJECTS = $(am_trimest_OBJECTS)
+ trimest_LDADD = $(LDADD)
+ trimest_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_trimseq_OBJECTS = trimseq.$(OBJEXT)
+ trimseq_OBJECTS = $(am_trimseq_OBJECTS)
+@@ -1904,7 +1905,7 @@ trimseq_LDADD = $(LDADD)
+ trimseq_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_trimspace_OBJECTS = trimspace.$(OBJEXT)
+ trimspace_OBJECTS = $(am_trimspace_OBJECTS)
+@@ -1913,14 +1914,14 @@ trimspace_DEPENDENCIES = ../nucleus/libn
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_twofeat_OBJECTS = twofeat.$(OBJEXT)
+ twofeat_OBJECTS = $(am_twofeat_OBJECTS)
+ twofeat_LDADD = $(LDADD)
+ twofeat_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_union_OBJECTS = union.$(OBJEXT)
+ union_OBJECTS = $(am_union_OBJECTS)
+@@ -1928,7 +1929,7 @@ union_LDADD = $(LDADD)
+ union_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_vectorstrip_OBJECTS = vectorstrip.$(OBJEXT)
+ vectorstrip_OBJECTS = $(am_vectorstrip_OBJECTS)
+@@ -1937,14 +1938,14 @@ vectorstrip_DEPENDENCIES = ../nucleus/li
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_water_OBJECTS = water.$(OBJEXT)
+ water_OBJECTS = $(am_water_OBJECTS)
+ water_LDADD = $(LDADD)
+ water_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_whichdb_OBJECTS = whichdb.$(OBJEXT)
+ whichdb_OBJECTS = $(am_whichdb_OBJECTS)
+@@ -1952,7 +1953,7 @@ whichdb_LDADD = $(LDADD)
+ whichdb_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_wobble_OBJECTS = wobble.$(OBJEXT)
+ wobble_OBJECTS = $(am_wobble_OBJECTS)
+@@ -1960,7 +1961,7 @@ wobble_LDADD = $(LDADD)
+ wobble_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_wordcount_OBJECTS = wordcount.$(OBJEXT)
+ wordcount_OBJECTS = $(am_wordcount_OBJECTS)
+@@ -1969,7 +1970,7 @@ wordcount_DEPENDENCIES = ../nucleus/libn
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_wordfinder_OBJECTS = wordfinder.$(OBJEXT)
+ wordfinder_OBJECTS = $(am_wordfinder_OBJECTS)
+ wordfinder_LDADD = $(LDADD)
+@@ -1977,7 +1978,7 @@ wordfinder_DEPENDENCIES = ../nucleus/lib
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_wordmatch_OBJECTS = wordmatch.$(OBJEXT)
+ wordmatch_OBJECTS = $(am_wordmatch_OBJECTS)
+ wordmatch_LDADD = $(LDADD)
+@@ -1985,14 +1986,14 @@ wordmatch_DEPENDENCIES = ../nucleus/libn
+ ../ajax/acd/libacd.la ../ajax/ajaxdb/libajaxdb.la \
+ ../ajax/ensembl/libensembl.la ../ajax/graphics/libajaxg.la \
+ ../ajax/core/libajax.la $(EXTRA_LDS) \
+- ../plplot/libeplplot.la $(am__DEPENDENCIES_1)
++ $(am__DEPENDENCIES_1)
+ am_wossname_OBJECTS = wossname.$(OBJEXT)
+ wossname_OBJECTS = $(am_wossname_OBJECTS)
+ wossname_LDADD = $(LDADD)
+ wossname_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ am_yank_OBJECTS = yank.$(OBJEXT)
+ yank_OBJECTS = $(am_yank_OBJECTS)
+@@ -2000,7 +2001,7 @@ yank_LDADD = $(LDADD)
+ yank_DEPENDENCIES = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+- $(EXTRA_LDS) ../plplot/libeplplot.la \
++ $(EXTRA_LDS) \
+ $(am__DEPENDENCIES_1)
+ DEFAULT_INCLUDES = -I. at am__isrc@
+ depcomp = $(SHELL) $(top_srcdir)/depcomp
+@@ -2328,6 +2329,8 @@ PCRE_MINOR = @PCRE_MINOR@
+ PCRE_POSIXLIB_VERSION = @PCRE_POSIXLIB_VERSION@
+ PCRE_VERSION = @PCRE_VERSION@
+ PG_CONFIG = @PG_CONFIG@
++PLPLOT_CFLAGS = @PLPLOT_CFLAGS@
++PLPLOT_LIBS = @PLPLOT_LIBS@
+ POSIX_MALLOC_THRESHOLD = @POSIX_MALLOC_THRESHOLD@
+ POSTGRESQL_CFLAGS = @POSTGRESQL_CFLAGS@
+ POSTGRESQL_LDFLAGS = @POSTGRESQL_LDFLAGS@
+@@ -2410,12 +2413,12 @@ EXTRA_DIST = emboss.default.template
+ @ISAIXIA64_TRUE@@ISSHARED_TRUE@ -lacd -lajaxdb -lensembl -lajaxg -lajax -leexpat -lepcre -lezlib
+
+ AM_CFLAGS = $(AIX_CFLAGS) $(WARN_CFLAGS) $(DEVWARN_CFLAGS)
+- at ESYSTEMLIBS_FALSE@EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/zlib -I$(top_srcdir)/ajax/pcre
++ at ESYSTEMLIBS_FALSE@EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/zlib -I$(top_srcdir)/ajax/pcre -I$(top_srcdir)/plplot
+ INCLUDES = -I$(top_srcdir)/nucleus \
+- $(EXTRA_INCLUDES) \
++ $(EXTRA_INCLUDES) $(PLPLOT_CFLAGS) \
+ -I$(top_srcdir)/ajax/core -I$(top_srcdir)/ajax/graphics \
+ -I$(top_srcdir)/ajax/ensembl -I$(top_srcdir)/ajax/ajaxdb \
+- -I$(top_srcdir)/ajax/acd -I$(top_srcdir)/plplot
++ -I$(top_srcdir)/ajax/acd
+
+ aaindexextract_SOURCES = aaindexextract.c
+ abiview_SOURCES = abiview.c
+@@ -2643,12 +2646,12 @@ seqrettype_SOURCES = seqrettype.c
+ sqltest_SOURCES = sqltest.c
+ testplot_SOURCES = testplot.c
+ treetypedisplay_SOURCES = treetypedisplay.c
+- at ESYSTEMLIBS_FALSE@EXTRA_LDS = ../ajax/zlib/libezlib.la ../ajax/expat/libeexpat.la ../ajax/pcre/libepcre.la
++ at ESYSTEMLIBS_FALSE@EXTRA_LDS = ../ajax/zlib/libezlib.la ../ajax/expat/libeexpat.la ../ajax/pcre/libepcre.la ../plplot/libeplplot.la
+ LDADD = ../nucleus/libnucleus.la ../ajax/acd/libacd.la \
+ ../ajax/ajaxdb/libajaxdb.la ../ajax/ensembl/libensembl.la \
+ ../ajax/graphics/libajaxg.la ../ajax/core/libajax.la \
+ $(EXTRA_LDS) \
+- ../plplot/libeplplot.la \
++ $(PLPLOT_LIBS) \
+ $(XLIB)
+
+ pkgdata_DATA = emboss.default.template
+diff -up EMBOSS-6.3.1/m4/plplot.m4.system-plplot EMBOSS-6.3.1/m4/plplot.m4
+--- EMBOSS-6.3.1/m4/plplot.m4.system-plplot 2010-08-03 08:01:37.989233208 -0400
++++ EMBOSS-6.3.1/m4/plplot.m4 2010-08-03 08:01:37.989233208 -0400
+@@ -0,0 +1,84 @@
++dnl @synopsis CHECK_PLPLOT([PLPLOT_LIBDIR, PLPLOT_INCDIR,
++dnl [ACTION-IF-FOUND[, ACTION-IF-NOT-FOUND]]])
++dnl This macro figures out if the PlPlot library and header files
++dnl are installed.
++dnl You may wish to use these variables in your default LIBS and CFLAGS:
++dnl
++dnl LIBS="$PLPLOT_LIBS $LIBS"
++dnl CFLAGS="$CFLAGS $PLPLOT_CFLAGS"
++dnl
++dnl ACTION-IF-FOUND is a list of shell commands to run if PlPlot
++dnl is found (HAVE_PLPLOT is defined first), and ACTION-IF-NOT-FOUND
++dnl is a list of commands to run it if it is not found.
++dnl
++dnl @author Emmanuel Bertin <bertin at iap.fr>
++
++AC_DEFUN([CHECK_PLPLOT], [
++AC_REQUIRE([AC_CANONICAL_HOST])
++
++PLPLOT_LIBS=""
++OLIBS="$LIBS"
++LIBS=""
++
++check_plplot_ok=yes
++check_plplotpkg_ok=no
++if test x$2 = x && test x$1 = x; then
++ AC_MSG_CHECKING([for PLPlot pkg-config info])
++ if pkg-config --exists plplotd; then
++ AC_MSG_RESULT([yes])
++ [PLPLOT_CFLAGS=`pkg-config --cflags plplotd`]
++ [PLPLOT_LIBS=`pkg-config --libs plplotd`]
++ AC_DEFINE(PLPLOT_H, "plplot.h", [PLPlot header filename.])
++ AC_DEFINE(PLPLOTP_H, "plplotP.h", [PLPlot private header filename.])
++ check_plplotpkg_ok=yes
++ else
++ AC_MSG_RESULT([no])
++ fi
++fi
++if test x$check_plplotpkg_ok = xno; then
++ if test x$2 = x; then
++ AC_CHECK_HEADER(plplot.h, [check_plplothead_ok=yes], [check_plplothead_ok=no])
++ if test x$check_plplothead_ok = xyes; then
++ AC_DEFINE(PLPLOT_H, "plplot.h", [PLPlot header filename.])
++ AC_DEFINE(PLPLOTP_H, "plplotP.h", [PLPlot private header filename.])
++ else
++ AC_CHECK_HEADER(plplot/plplot.h,
++ [check_plplothead_ok=yes], [check_plplothead_ok=no])
++ if test x$check_plplothead_ok = xyes; then
++ AC_DEFINE(PLPLOT_H, "plplot/plplot.h", [PLPlot header filename.])
++ AC_DEFINE(PLPLOTP_H, "plplot/plplotP.h",
++ [PLPlot private header filename.])
++ else
++ check_plplot_ok=no
++ fi
++ fi
++ else
++ AC_CHECK_HEADER($2/plplot.h,
++ [check_plplothead_ok=yes], [check_plplothead_ok=no])
++ if test x$check_plplothead_ok = xyes; then
++ AC_DEFINE(PLPLOT_H, "plplot.h", [PLPlot header filename.])
++ AC_DEFINE(PLPLOTP_H, "plplotP.h", [PLPlot private header filename.])
++ [PLPLOT_CFLAGS="-I$2"]
++ else
++ check_plplot_ok=no
++ fi
++ fi
++ if test x$1 = x; then
++ AC_CHECK_LIB(plplotd, c_plinit,, [check_plplot_ok=no])
++ [PLPLOT_LIBS="-lplplotd"]
++ else
++ AC_CHECK_LIB(plplotd, c_plinit,, [check_plplot_ok=no], [-L$1])
++ [PLPLOT_LIBS="-L$1 -lplplotd"]
++ fi
++fi
++
++LIBS="$OLIBS"
++if test x$check_plplot_ok = xyes; then
++ AC_SUBST(PLPLOT_CFLAGS)
++ AC_SUBST(PLPLOT_LIBS)
++ AC_DEFINE(HAVE_PLPLOT,1,
++ [Define if you have the PLPlot libraries and header files.])
++fi
++
++])dnl CHECK_PLPLOT
++
+diff -up EMBOSS-6.3.1/Makefile.am.system-plplot EMBOSS-6.3.1/Makefile.am
+--- EMBOSS-6.3.1/Makefile.am.system-plplot 2010-01-11 08:15:41.000000000 -0500
++++ EMBOSS-6.3.1/Makefile.am 2010-08-03 08:01:37.989233208 -0400
+@@ -5,7 +5,7 @@ ACLOCAL_AMFLAGS = -I m4
+
+ AUTOMAKE_OPTIONS = gnits
+
+-SUBDIRS = plplot ajax nucleus emboss test doc jemboss
++SUBDIRS = ajax nucleus emboss test doc jemboss
+
+ # AJAX_FIXED_ROOT = \"`pwd`/emboss/acd\"
+
+@@ -20,6 +20,5 @@ dist-hook:
+ tar cBf - test | ( cd $(distdir); tar xBf - ; rm -rf test/CVS test/*/CVS )
+ tar cBf - emboss/acd | ( cd $(distdir); tar xBf - ; cd emboss/acd; rm -rf CVS )
+ tar cBf - emboss/data | ( cd $(distdir); tar xBf - ; cd emboss/data; rm -rf CVS */CVS */*/CVS )
+- tar cBf - plplot/lib | ( cd $(distdir); tar xBf - ; find plplot -name CVS | xargs rm -rf )
+ tar cBf - doc | ( cd $(distdir); tar xBf - ; find doc -name CVS | xargs rm -rf; )
+ tar cBf - jemboss | ( cd $(distdir); tar xBf - ; find jemboss -name CVS | xargs rm -rf; find jemboss -name Makefile | xargs rm -rf; find jemboss -name .cvsignore | xargs rm -rf )
+diff -up EMBOSS-6.3.1/Makefile.in.system-plplot EMBOSS-6.3.1/Makefile.in
+--- EMBOSS-6.3.1/Makefile.in.system-plplot 2010-07-19 07:55:42.000000000 -0400
++++ EMBOSS-6.3.1/Makefile.in 2010-08-03 08:01:37.989233208 -0400
+@@ -42,7 +42,8 @@ ACLOCAL_M4 = $(top_srcdir)/aclocal.m4
+ am__aclocal_m4_deps = $(top_srcdir)/m4/amd64.m4 \
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+- $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pngdriver.m4 \
++ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
++ $(top_srcdir)/m4/pngdriver.m4 \
+ $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+ $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+@@ -182,6 +183,8 @@ PCRE_MINOR = @PCRE_MINOR@
+ PCRE_POSIXLIB_VERSION = @PCRE_POSIXLIB_VERSION@
+ PCRE_VERSION = @PCRE_VERSION@
+ PG_CONFIG = @PG_CONFIG@
++PLPLOT_CFLAGS = @PLPLOT_CFLAGS@
++PLPLOT_LIBS = @PLPLOT_LIBS@
+ POSIX_MALLOC_THRESHOLD = @POSIX_MALLOC_THRESHOLD@
+ POSTGRESQL_CFLAGS = @POSTGRESQL_CFLAGS@
+ POSTGRESQL_LDFLAGS = @POSTGRESQL_LDFLAGS@
+@@ -257,7 +260,7 @@ top_builddir = @top_builddir@
+ top_srcdir = @top_srcdir@
+ ACLOCAL_AMFLAGS = -I m4
+ AUTOMAKE_OPTIONS = gnits
+-SUBDIRS = plplot ajax nucleus emboss test doc jemboss
++SUBDIRS = ajax nucleus emboss test doc jemboss
+
+ # AJAX_FIXED_ROOT = \"`pwd`/emboss/acd\"
+
+@@ -757,7 +760,6 @@ dist-hook:
+ tar cBf - test | ( cd $(distdir); tar xBf - ; rm -rf test/CVS test/*/CVS )
+ tar cBf - emboss/acd | ( cd $(distdir); tar xBf - ; cd emboss/acd; rm -rf CVS )
+ tar cBf - emboss/data | ( cd $(distdir); tar xBf - ; cd emboss/data; rm -rf CVS */CVS */*/CVS )
+- tar cBf - plplot/lib | ( cd $(distdir); tar xBf - ; find plplot -name CVS | xargs rm -rf )
+ tar cBf - doc | ( cd $(distdir); tar xBf - ; find doc -name CVS | xargs rm -rf; )
+ tar cBf - jemboss | ( cd $(distdir); tar xBf - ; find jemboss -name CVS | xargs rm -rf; find jemboss -name Makefile | xargs rm -rf; find jemboss -name .cvsignore | xargs rm -rf )
+
+diff -up EMBOSS-6.3.1/nucleus/Makefile.am.system-plplot EMBOSS-6.3.1/nucleus/Makefile.am
+--- EMBOSS-6.3.1/nucleus/Makefile.am.system-plplot 2010-08-03 08:01:37.969108470 -0400
++++ EMBOSS-6.3.1/nucleus/Makefile.am 2010-08-03 08:01:37.990233208 -0400
+@@ -19,12 +19,12 @@ CYGWIN_LIBS = -L../plplot -L../ajax/pcre
+ -lezlib -leplplot
+ else
+ if !ESYSTEMLIBS
+-EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/zlib -I$(top_srcdir)/ajax/pcre
++EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/zlib -I$(top_srcdir)/ajax/pcre -I$(top_srcdir)/plplot
+ endif
+ endif
+
+
+-INCLUDES = -I$(top_srcdir)/plplot $(X_CFLAGS) -I$(srcdir)/ \
++INCLUDES = $(PLPLOT_CFLAGS) $(X_CFLAGS) -I$(srcdir)/ \
+ -I$(top_srcdir)/ajax \
+ $(EXTRA_INCLUDES) \
+ -I$(top_srcdir)/ajax/core -I$(top_srcdir)/ajax/graphics \
+diff -up EMBOSS-6.3.1/nucleus/Makefile.in.system-plplot EMBOSS-6.3.1/nucleus/Makefile.in
+--- EMBOSS-6.3.1/nucleus/Makefile.in.system-plplot 2010-08-03 08:01:37.969108470 -0400
++++ EMBOSS-6.3.1/nucleus/Makefile.in 2010-08-03 08:01:37.990233208 -0400
+@@ -42,7 +42,8 @@ ACLOCAL_M4 = $(top_srcdir)/aclocal.m4
+ am__aclocal_m4_deps = $(top_srcdir)/m4/amd64.m4 \
+ $(top_srcdir)/m4/general.m4 $(top_srcdir)/m4/hpdf.m4 \
+ $(top_srcdir)/m4/java.m4 $(top_srcdir)/m4/lf_x11.m4 \
+- $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/pngdriver.m4 \
++ $(top_srcdir)/m4/mysql.m4 $(top_srcdir)/m4/plplot.m4 \
++ $(top_srcdir)/m4/pngdriver.m4 \
+ $(top_srcdir)/m4/postgresql.m4 $(top_srcdir)/m4/sgi.m4 \
+ $(top_srcdir)/configure.in
+ am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
+@@ -178,6 +179,8 @@ PCRE_MINOR = @PCRE_MINOR@
+ PCRE_POSIXLIB_VERSION = @PCRE_POSIXLIB_VERSION@
+ PCRE_VERSION = @PCRE_VERSION@
+ PG_CONFIG = @PG_CONFIG@
++PLPLOT_CFLAGS = @PLPLOT_CFLAGS@
++PLPLOT_LIBS = @PLPLOT_LIBS@
+ POSIX_MALLOC_THRESHOLD = @POSIX_MALLOC_THRESHOLD@
+ POSTGRESQL_CFLAGS = @POSTGRESQL_CFLAGS@
+ POSTGRESQL_LDFLAGS = @POSTGRESQL_LDFLAGS@
+@@ -262,8 +265,8 @@ AM_CFLAGS = $(AIX_CFLAGS) $(WARN_CFLAGS)
+ @ISCYGWIN_TRUE at -L../ajax/acd -lacd -lajaxdb -lensembl -lajaxg -lajax -leexpat -lepcre \
+ @ISCYGWIN_TRUE at -lezlib -leplplot
+
+- at ESYSTEMLIBS_FALSE@@ISCYGWIN_FALSE at EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/zlib -I$(top_srcdir)/ajax/pcre
+-INCLUDES = -I$(top_srcdir)/plplot $(X_CFLAGS) -I$(srcdir)/ \
++ at ESYSTEMLIBS_FALSE@@ISCYGWIN_FALSE at EXTRA_INCLUDES = -I$(top_srcdir)/ajax/expat -I$(top_srcdir)/ajax/zlib -I$(top_srcdir)/ajax/pcre -I$(top_srcdir)/plplot
++INCLUDES = $(PLPLOT_CFLAGS) $(X_CFLAGS) -I$(srcdir)/ \
+ -I$(top_srcdir)/ajax \
+ $(EXTRA_INCLUDES) \
+ -I$(top_srcdir)/ajax/core -I$(top_srcdir)/ajax/graphics \
diff --git a/EMBOSS-fedora.patch b/EMBOSS-fedora.patch
index 857ced4..ed1725f 100644
--- a/EMBOSS-fedora.patch
+++ b/EMBOSS-fedora.patch
@@ -1,9 +1,10 @@
---- jemboss/resources/jemboss.properties.fedora 2008-05-02 15:27:28.000000000 +0200
-+++ jemboss/resources/jemboss.properties 2009-04-16 20:11:28.000000000 +0200
-@@ -5,8 +5,8 @@
+diff -up jemboss/resources/jemboss.properties.fedora jemboss/resources/jemboss.properties
+--- jemboss/resources/jemboss.properties.fedora 2010-07-02 07:19:55.000000000 -0400
++++ jemboss/resources/jemboss.properties 2010-08-02 17:18:45.298144756 -0400
+@@ -4,8 +4,8 @@ server.public=https://jemboss.hgmp.mrc.a
+ server.private=https://jemboss.hgmp.mrc.ac.uk:8443/axis/services
service.public=JembossAuthServer
service.private=JembossAuthServer
- plplot=/packages/emboss/STABLE/share/EMBOSS/
-embossData=/packages/emboss/STABLE/share/EMBOSS/data/
-embossBin=/packages/emboss/STABLE/bin/
+embossData=/usr/share/EMBOSS/data/
diff --git a/EMBOSS.spec b/EMBOSS.spec
index 6f06f0d..fcfb294 100644
--- a/EMBOSS.spec
+++ b/EMBOSS.spec
@@ -17,8 +17,8 @@
%define emhome %{_datadir}/EMBOSS
Name: EMBOSS
-Version: 6.2.0
-Release: 4%{?dist}
+Version: 6.3.1
+Release: 1%{?dist}
Summary: The European Molecular Biology Open Software Suite
Group: Applications/Engineering
@@ -38,18 +38,18 @@ Source1: ftp://emboss.open-bio.org/pub/EMBOSS/fixes/README.fixes
Source2: jemboss.desktop
%endif
# Upstream patch
-Patch0: ftp://emboss.open-bio.org/pub/EMBOSS/fixes/patches/patch-1-18.gz
+Patch0: ftp://emboss.open-bio.org/pub/EMBOSS/fixes/patches/patch-1-1.gz
# Use system-wide pcre. Sent upstream.
-Patch1: EMBOSS-6.2.0-system-pcre.patch
-# Use system-wide zlib.
-Patch2: EMBOSS-6.2.0-system-zlib.patch
+Patch1: EMBOSS-6.3.1-system-pcre.patch
# Use system-wide plplot
-Patch3: EMBOSS-6.2.0-system-plplot.patch
+Patch3: EMBOSS-6.3.1-system-plplot.patch
# Use system-wide expat
-Patch4: EMBOSS-6.2.0-system-expat.patch
+Patch4: EMBOSS-6.3.1-system-expat.patch
#Fedora-specific. Not sent upstream.
Patch5: %{name}-fedora.patch
+Patch6: EMBOSS-6.3.1-prevent-autotooling.patch
+Patch7: EMBOSS-6.3.1-system-hack.patch
BuildRoot: %{_tmppath}/%{name}-%{version}-%{release}-root-%(%{__id_u} -n)
BuildRequires: gd-devel
@@ -58,6 +58,7 @@ BuildRequires: pcre-devel
BuildRequires: zlib-devel
BuildRequires: plplot-devel
BuildRequires: expat-devel
+BuildRequires: libharu-devel
%if %{with jemboss}
BuildRequires: ant
BuildRequires: desktop-file-utils
@@ -129,10 +130,11 @@ http://www.hgmp.mrc.ac.uk/Software/EMBOSS/Jemboss/
%setup -q
%patch0 -p1
%patch1 -p1 -b .system-pcre
-%patch2 -p1 -b .system-zlib
%patch3 -p1 -b .system-plplot
%patch4 -p1 -b .system-expat
%patch5 -p0 -b .fedora
+%patch6 -p1 -b .autobarf
+%patch7 -p1 -b .system
# Remove bundled plplot, expat, pcre and zlib to make sure that system versions are used
rm -rf plplot/
@@ -178,6 +180,7 @@ export PATH=$PATH:%{_java}/bin/
--with-auth \
--with-thread \
--includedir=%{_includedir}/EMBOSS \
+ --enable-systemlibs \
%ifarch ppc64 sparc64 x86_64
--enable-64 \
%endif
@@ -230,9 +233,9 @@ pushd $RPM_BUILD_ROOT%{_datadir}/EMBOSS/jemboss/utils
chmod +x install-jemboss-server.sh keys.sh makeFileManagerJNLP.sh makeJar.csh \
makeJNLP.sh
popd
-pushd $RPM_BUILD_ROOT%{_datadir}/EMBOSS/jemboss/api
-chmod +x getClasses.pl makeDocs.csh
-popd
+# pushd $RPM_BUILD_ROOT%{_datadir}/EMBOSS/jemboss/api
+# chmod +x getClasses.pl makeDocs.csh
+# popd
#rename conflicting binaries
mv $RPM_BUILD_ROOT%{_bindir}/chaos $RPM_BUILD_ROOT%{_bindir}/em_chaos
@@ -290,6 +293,9 @@ rm -rf $RPM_BUILD_ROOT
%changelog
+* Mon Aug 02 2010 Tom "spot" Callaway <tcallawa at redhat.com> - 6.3.1-1
+- update to 6.3.1
+
* Wed Jul 07 2010 Tom "spot" Callaway <tcallawa at redhat.com> - 6.2.0-4
- include license information in EMBOSS-libs package, instead of EMBOSS
since EMBOSS-libs always gets pulled in when EMBOSS is installed
diff --git a/README.fixes b/README.fixes
index dd4d11e..3c56d79 100644
--- a/README.fixes
+++ b/README.fixes
@@ -1,160 +1,9 @@
The files in this directory are bugfix replacements for files in
-the EMBOSS-6.2.0 distribution. Just drop the replacement files in
+the EMBOSS-6.3.1 distribution. Just drop the replacement files in
the location shown and redo the 'make install.'
-Fix 1. EMBOSS-6.2.0/emboss/jembossctl.c
- EMBOSS-6.2.0/jemboss/lib/jemboss.jar
- EMBOSS-6.2.0/jemboss/org/emboss/jemboss/gui/filetree/DragTree.java
- EMBOSS-6.2.0/jemboss/org/emboss/jemboss/gui/filetree/RemoteDragTree.java
- EMBOSS-6.2.0/jemboss/org/emboss/jemboss/gui/form/BuildJembossForm.java
- EMBOSS-6.2.0/jemboss/org/emboss/jemboss/gui/ShowResultSet.java
- EMBOSS-6.2.0/jemboss/org/emboss/jemboss/JembossParams.java
- EMBOSS-6.2.0/jemboss/org/emboss/jemboss/programs/RunEmbossApplication2.java
- EMBOSS-6.2.0/jemboss/org/emboss/jemboss/server/JembossAuthServer.java
- EMBOSS-6.2.0/jemboss/org/emboss/jemboss/server/JembossServer.java
- EMBOSS-6.2.0/jemboss/org/emboss/jemboss/server/JembossThread.java
- EMBOSS-6.2.0/jemboss/org/emboss/jemboss/soap/AuthPopup.java
- EMBOSS-6.2.0/jemboss/org/emboss/jemboss/soap/JembossRun.java
- EMBOSS-6.2.0/jemboss/org/emboss/jemboss/soap/PrivateRequest.java
- EMBOSS-6.2.0/jemboss/utils/install-jemboss-server.sh
+Fix 1. EMBOSS-6.3.1/configure
+ EMBOSS-6.3.1/m4/mysql.m4
-26 Feb 2010: Various Jemboss fixes including allowing multiple
- parameters to "wossname" and reporting of stderr
- output
-
-
-Fix 2. EMBOSS-6.2.0/emboss/acd/jaspextract.acd
- EMBOSS-6.2.0/emboss/acd/jaspscan.acd
- EMBOSS-6.2.0/emboss/jaspextract.c
- EMBOSS-6.2.0/emboss/jaspscan.c
-
-26 Feb 2010: jaspextract and jaspscan can use the latest-format data at
- http://jaspar.genereg.net/html/DOWNLOAD/Archive.zip
- jaspextract uses the data in the "all_data/FlatFileDir"
- directory. It is advisable to clear delete any old data files
- from your EMBOSS data file area e.g. from the
- /usr/local/emboss/share/EMBOSS/data/JASPAR_* directories
-
-
-Fix 3. EMBOSS-6.2.0/emboss/emma.c
-
-26 Feb 2010: Takes note once again of any EMBOSS_CLUSTALW environment variable
- setting.
-
-
-Fix 4. EMBOSS-6.2.0/emboss/acd/trimseq.acd
-
-26 Feb 2010: Place limit on the maximum window size
-
-
-Fix 5. EMBOSS-6.2.0/ajax/core/ajpat.c
- EMBOSS-6.2.0/nucleus/embpat.c
-
-26 Feb 2010: Fix crash when excessive mismatches requested in one of the
- fuzzpro search algorithms.
-
-
-Fix 6. EMBOSS-6.2.0/emboss/coderet.c
- EMBOSS-6.2.0/emboss/splitter.c
-
-26 Feb 2010: Fix crash if no features in the source sequence
-
-
-Fix 7. EMBOSS-6.2.0/emboss/matcher.c
-
-26 Feb 2010: Fix memory allocation problem
-
-
-Fix 8. EMBOSS-6.2.0/ajax/core/ajseqread.c
- EMBOSS-6.2.0/ajax/core/ajseqwrite.c
-
-01-Mar-2010: Fix sequence format 'refseqp' to be a valid protein
- output format and to preserve more fields from refseqp input.
-
-
-Fix 9. EMBOSS-6.2.0/ajax/core/ajlist.c
- EMBOSS-6.2.0/ajax/core/ajlist.h
- EMBOSS-6.2.0/emboss/showfeat.c
-
-01-Mar-2010: Fix showfeat sorted feature output to correctly sort exons
- for 'join' feature locations.
-
-
-Fix 10.EMBOSS-6.2.0/ajax/graphics/ajgraph.c
- EMBOSS-6.2.0/emboss/prettyplot.c
-
-01-Mar-2010: Fix PNG graphics output format to remove large blank
- margins added by the plplot driver. Improve prettyplot
- output to better centre sequence characters within boxes.
-
-
-Fix 11.EMBOSS-6.2.0/emboss/recoder.c
- EMBOSS-6.2.0/emboss/remap.c
- EMBOSS-6.2.0/emboss/restrict.c
- EMBOSS-6.2.0/emboss/showseq.c
- EMBOSS-6.2.0/emboss/silent.c
-
-01-Mar-2010: Skip bad enzyme file records
-
-
-Fix 12.EMBOSS-6.2.0/emboss/showpep.c
- EMBOSS-6.2.0/emboss/showseq.c
-
-01-Mar-2010: Correct HTML output closing tag.
-
-
-Fix 13.EMBOSS-6.2.0/ajax/core/ajfeat.c
-
-01-Mar-2010: Remove warnings for accessions and repeat features in
- ensembl format EMBL files.
-
-
-Fix 14.EMBOSS-6.2.0/emboss/acd/cirdna.acd
- EMBOSS-6.2.0/emboss/acd/knowntypes.standard
-
-01-Mar-2010: Fix description of cirdna input
-
-
-Fix 15.EMBOSS-6.2.0/emboss/acd/extractfeat.acd
- EMBOSS-6.2.0/emboss/acd/maskfeat.acd
- EMBOSS-6.2.0/emboss/acd/showfeat.acd
- EMBOSS-6.2.0/emboss/acd/showpep.acd
- EMBOSS-6.2.0/emboss/acd/showseq.acd
- EMBOSS-6.2.0/emboss/acd/twofeat.acd
- EMBOSS-6.2.0/doc/programs/html/extractfeat.html
- EMBOSS-6.2.0/doc/programs/html/maskfeat.html
- EMBOSS-6.2.0/doc/programs/html/showfeat.html
- EMBOSS-6.2.0/doc/programs/html/showpep.html
- EMBOSS-6.2.0/doc/programs/html/showseq.html
- EMBOSS-6.2.0/doc/programs/html/twofeat.html
- EMBOSS-6.2.0/doc/programs/text/extractfeat.txt
- EMBOSS-6.2.0/doc/programs/text/maskfeat.txt
- EMBOSS-6.2.0/doc/programs/text/showfeat.txt
- EMBOSS-6.2.0/doc/programs/text/showpep.txt
- EMBOSS-6.2.0/doc/programs/text/showseq.txt
- EMBOSS-6.2.0/doc/programs/text/twofeat.txt
-
-01-Mar-2010: Fix URLs for EMBL/GenBank and SwissProt feature table
- descriptions in help and documentation.
-
-
-Fix 16.EMBOSS-6.2.0/emboss/acd/remap.acd
- EMBOSS-6.2.0/emboss/acd/restover.acd
- EMBOSS-6.2.0/emboss/acd/restrict.acd
- EMBOSS-6.2.0/emboss/acd/showseq.acd
-
-01-Mar-2010: Remove artificial upper limit on number of restriction cuts
-
-
-Fix 17.EMBOSS-6.2.0/doc/programs/html/density.2.density.gif
- EMBOSS-6.2.0/doc/programs/html/density.3.density.gif
- EMBOSS-6.2.0/doc/programs/html/Makefile.am
- EMBOSS-6.2.0/doc/programs/html/Makefile.in
- EMBOSS-6.2.0/doc/programs/html/Makefile
-
-01-Mar-2010: Missing images for density usage examples
-
-
-Fix 18. EMBOSS-6.2.0/ajax/core/ajsys.c
-
-02-Mar-2010: Add .exe extension when searching for CYGWIN executables
+21 Jul 2010: Addresses a problem whereby, in some circumstances, inclusion of
+ hpdf support prevented inclusion of MySQL support.
diff --git a/sources b/sources
index 030cbf8..4e461f9 100644
--- a/sources
+++ b/sources
@@ -1,2 +1,2 @@
-2e2937dd0493814ca0f64981f4c79319 EMBOSS-6.2.0.tar.gz
-562038e587099462869c45fda2e9628d patch-1-18.gz
+4d4cc882ce44ad5e44c38231c9f3ae53 patch-1-1.gz
+04d1179b6261103a77e396d54f8ac38e EMBOSS-6.3.1.tar.gz
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