rpms/hmmer/devel .cvsignore, 1.2, 1.3 hmmer.spec, 1.10, 1.11 sources, 1.2, 1.3

[Christian Iseli]

Author: c4chris

Update of /cvs/extras/rpms/hmmer/devel
In directory cvs01.phx2.fedoraproject.org:/tmp/cvs-serv13971

Modified Files:
	.cvsignore hmmer.spec sources 
Log Message:
New upstream version 3.0.


Index: .cvsignore
===================================================================
RCS file: /cvs/extras/rpms/hmmer/devel/.cvsignore,v
retrieving revision 1.2
retrieving revision 1.3
diff -u -p -r1.2 -r1.3
--- .cvsignore	8 Aug 2005 08:29:45 -0000	1.2
+++ .cvsignore	20 Jul 2010 09:12:23 -0000	1.3
@@ -1 +1 @@
-hmmer-2.3.2.tar.gz
+hmmer-3.0.tar.gz


Index: hmmer.spec
===================================================================
RCS file: /cvs/extras/rpms/hmmer/devel/hmmer.spec,v
retrieving revision 1.10
retrieving revision 1.11
diff -u -p -r1.10 -r1.11
--- hmmer.spec	25 Jul 2009 02:10:43 -0000	1.10
+++ hmmer.spec	20 Jul 2010 09:12:23 -0000	1.11
@@ -1,12 +1,12 @@
 Name:           hmmer
-Version:        2.3.2
-Release:        11%{?dist}
+Version:        3.0
+Release:        1%{?dist}
 Summary:        Profile HMM software for protein sequence analysis
 
 Group:          Applications/Engineering
-License:        GPLv2+
+License:        GPLv3
 URL:            http://hmmer.janelia.org
-Source0:        ftp://selab.janelia.org/pub/software/hmmer/%{version}/hmmer-%{version}.tar.gz
+Source0:        http://selab.janelia.org/software/hmmer3/3.0/hmmer-3.0.tar.gz
 BuildRoot:      %{_tmppath}/%{name}-%{version}-%{release}-root-%(%{__id_u} -n)
 
 %description
@@ -21,9 +21,7 @@ software for protein sequence analysis.
 
 
 %build
-%configure \
-  --enable-lfs \
-  --enable-threads
+%configure
 make %{?_smp_mflags}
 
 
@@ -33,7 +31,11 @@ make check
 
 %install
 rm -rf $RPM_BUILD_ROOT
-make install BINDIR=$RPM_BUILD_ROOT%{_bindir} MANDIR=$RPM_BUILD_ROOT%{_mandir}
+make install DESTDIR=$RPM_BUILD_ROOT
+mkdir -p $RPM_BUILD_ROOT%{_mandir}/man1
+for f in documentation/man/*.man; do
+  cp -p $f $RPM_BUILD_ROOT%{_mandir}/man1/`basename $f .man`.1
+done
 
 
 %clean
@@ -42,12 +44,19 @@ rm -rf $RPM_BUILD_ROOT
 
 %files
 %defattr(-,root,root,-)
-%doc 00README COPYRIGHT LICENSE NOTES Userguide.pdf tutorial/
+%doc COPYRIGHT LICENSE README RELEASE-NOTES Userguide.pdf tutorial/
 %{_bindir}/*
 %{_mandir}/man1/*
 
 
 %changelog
+* Tue Jul 20 2010 Christian Iseli <Christian.Iseli at licr.org> - 3.0-1
+- New upstream version 3.0
+- License is now GPLv3
+- configure defaults to multi-threaded
+- make install now uses DESTDIR
+- copy manpages (rule missing in Makefile, apparently)
+
 * Fri Jul 24 2009 Fedora Release Engineering <rel-eng at lists.fedoraproject.org> - 2.3.2-11
 - Rebuilt for https://fedoraproject.org/wiki/Fedora_12_Mass_Rebuild
 


Index: sources
===================================================================
RCS file: /cvs/extras/rpms/hmmer/devel/sources,v
retrieving revision 1.2
retrieving revision 1.3
diff -u -p -r1.2 -r1.3
--- sources	8 Aug 2005 08:29:45 -0000	1.2
+++ sources	20 Jul 2010 09:12:23 -0000	1.3
@@ -1 +1 @@
-5f073340c0cf761288f961a73821228a  hmmer-2.3.2.tar.gz
+4cf685f3bc524ba5b5cdaaa070a83588  hmmer-3.0.tar.gz