[R-affyio/f16] Rebuild for 2.14.0
Tom Callaway
spot at fedoraproject.org
Wed Nov 9 18:54:45 UTC 2011
commit 7a1b6fc9b5f5b8f8be7690fc69c6ea2f72ccfd1f
Author: Tom "spot" Callaway <tcallawa at redhat.com>
Date: Wed Nov 9 13:54:41 2011 -0500
Rebuild for 2.14.0
R-affyio-1.22.0-no-zlibbioc.patch | 19 +++++++++++++++++++
R-affyio.spec | 7 ++++++-
sources | 2 +-
3 files changed, 26 insertions(+), 2 deletions(-)
---
diff --git a/R-affyio-1.22.0-no-zlibbioc.patch b/R-affyio-1.22.0-no-zlibbioc.patch
new file mode 100644
index 0000000..adf3f1f
--- /dev/null
+++ b/R-affyio-1.22.0-no-zlibbioc.patch
@@ -0,0 +1,19 @@
+diff -up affyio/DESCRIPTION.zlibbioc affyio/DESCRIPTION
+--- affyio/DESCRIPTION.zlibbioc 2011-11-09 13:52:14.414301661 -0500
++++ affyio/DESCRIPTION 2011-11-09 13:52:17.905242736 -0500
+@@ -4,7 +4,6 @@ Title: Tools for parsing Affymetrix data
+ Author: Benjamin Milo Bolstad <bmb at bmbolstad.com>
+ Maintainer: Benjamin Milo Bolstad <bmb at bmbolstad.com>
+ Depends: R (>= 2.6.0), methods
+-Imports: zlibbioc
+ Description: Routines for parsing Affymetrix data files based upon file format information. Primary focus is on accessing the CEL and CDF file formats.
+ License: LGPL (>= 2)
+ biocViews: Microarray, DataImport, Infrastructure
+diff -up affyio/NAMESPACE.zlibbioc affyio/NAMESPACE
+--- affyio/NAMESPACE.zlibbioc 2011-10-31 19:49:59.000000000 -0400
++++ affyio/NAMESPACE 2011-11-09 13:51:33.448998265 -0500
+@@ -1,4 +1,3 @@
+ exportPattern("^[^\\.]")
+ useDynLib("affyio")
+-import(zlibbioc)
+
diff --git a/R-affyio.spec b/R-affyio.spec
index afac32f..17c3c3f 100644
--- a/R-affyio.spec
+++ b/R-affyio.spec
@@ -2,7 +2,7 @@
%define Rversion 2.11.0
Name: R-%{packname}
-Version: 1.20.0
+Version: 1.22.0
Release: 1%{dist}
Summary: Tools for parsing Affymetrix data files
Summary(fr): Outils d'analyse de fichier de données de puces affymetrix
@@ -11,6 +11,7 @@ Group: Applications/Engineering
License: LGPLv2+
URL: http://bioconductor.org/packages/release/bioc/html/affyio.html
Source0: http://bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{version}.tar.gz
+Patch0: R-affyio-1.22.0-no-zlibbioc.patch
BuildRoot: %{_tmppath}/%{name}-%{version}-%{release}-root-%(%{__id_u} -n)
Requires: R-core >= %{Rversion} R-methods
@@ -28,6 +29,7 @@ CEL ou CDF.
%prep
%setup -q -c -n %{packname}
+%patch0 -p0 -b .zlibbioc
%build
@@ -61,6 +63,9 @@ rm -rf %{buildroot}
%{_libdir}/R/library/%{packname}/libs
%changelog
+* Wed Nov 9 2011 Tom Callaway <spot at fedoraproject.org> 1.22.0-1
+- Update to 1.22.0
+
* Wed Jun 22 2011 pingou <pingou at pingoured.fr> 1.20.0-1
- Update to version 1.20.0
diff --git a/sources b/sources
index 0b80ea1..f753186 100644
--- a/sources
+++ b/sources
@@ -1 +1 @@
-ead60db0645589300426350c62d9932a affyio_1.20.0.tar.gz
+2b934c9818afecfbdcbc248f6b35fea5 affyio_1.22.0.tar.gz
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