[R-affyio/f16] Rebuild for 2.14.0

Tom Callaway spot at fedoraproject.org
Wed Nov 9 18:54:45 UTC 2011


commit 7a1b6fc9b5f5b8f8be7690fc69c6ea2f72ccfd1f
Author: Tom "spot" Callaway <tcallawa at redhat.com>
Date:   Wed Nov 9 13:54:41 2011 -0500

    Rebuild for 2.14.0

 R-affyio-1.22.0-no-zlibbioc.patch |   19 +++++++++++++++++++
 R-affyio.spec                     |    7 ++++++-
 sources                           |    2 +-
 3 files changed, 26 insertions(+), 2 deletions(-)
---
diff --git a/R-affyio-1.22.0-no-zlibbioc.patch b/R-affyio-1.22.0-no-zlibbioc.patch
new file mode 100644
index 0000000..adf3f1f
--- /dev/null
+++ b/R-affyio-1.22.0-no-zlibbioc.patch
@@ -0,0 +1,19 @@
+diff -up affyio/DESCRIPTION.zlibbioc affyio/DESCRIPTION
+--- affyio/DESCRIPTION.zlibbioc	2011-11-09 13:52:14.414301661 -0500
++++ affyio/DESCRIPTION	2011-11-09 13:52:17.905242736 -0500
+@@ -4,7 +4,6 @@ Title: Tools for parsing Affymetrix data
+ Author: Benjamin Milo Bolstad <bmb at bmbolstad.com>
+ Maintainer: Benjamin Milo Bolstad <bmb at bmbolstad.com>
+ Depends: R (>= 2.6.0), methods
+-Imports: zlibbioc
+ Description: Routines for parsing Affymetrix data files based upon file format information. Primary focus is on accessing the CEL and CDF file formats.
+ License: LGPL (>= 2)
+ biocViews: Microarray, DataImport, Infrastructure
+diff -up affyio/NAMESPACE.zlibbioc affyio/NAMESPACE
+--- affyio/NAMESPACE.zlibbioc	2011-10-31 19:49:59.000000000 -0400
++++ affyio/NAMESPACE	2011-11-09 13:51:33.448998265 -0500
+@@ -1,4 +1,3 @@
+ exportPattern("^[^\\.]")
+ useDynLib("affyio")
+-import(zlibbioc)
+ 
diff --git a/R-affyio.spec b/R-affyio.spec
index afac32f..17c3c3f 100644
--- a/R-affyio.spec
+++ b/R-affyio.spec
@@ -2,7 +2,7 @@
 %define Rversion  2.11.0
 
 Name:             R-%{packname}
-Version:          1.20.0
+Version:          1.22.0
 Release:          1%{dist}
 Summary:          Tools for parsing Affymetrix data files
 Summary(fr):      Outils d'analyse de fichier de données de puces affymetrix
@@ -11,6 +11,7 @@ Group:            Applications/Engineering
 License:          LGPLv2+
 URL:              http://bioconductor.org/packages/release/bioc/html/affyio.html
 Source0:          http://bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{version}.tar.gz
+Patch0:           R-affyio-1.22.0-no-zlibbioc.patch
 BuildRoot:        %{_tmppath}/%{name}-%{version}-%{release}-root-%(%{__id_u} -n)
 
 Requires:         R-core >= %{Rversion} R-methods
@@ -28,6 +29,7 @@ CEL ou CDF.
 
 %prep
 %setup -q -c -n %{packname}
+%patch0 -p0 -b .zlibbioc
 
 %build
 
@@ -61,6 +63,9 @@ rm -rf %{buildroot}
 %{_libdir}/R/library/%{packname}/libs
 
 %changelog
+* Wed Nov  9 2011 Tom Callaway <spot at fedoraproject.org> 1.22.0-1
+- Update to 1.22.0
+
 * Wed Jun 22 2011 pingou <pingou at pingoured.fr> 1.20.0-1
 - Update to version 1.20.0
 
diff --git a/sources b/sources
index 0b80ea1..f753186 100644
--- a/sources
+++ b/sources
@@ -1 +1 @@
-ead60db0645589300426350c62d9932a  affyio_1.20.0.tar.gz
+2b934c9818afecfbdcbc248f6b35fea5  affyio_1.22.0.tar.gz


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