[R-GenomicFeatures/f16] rebuild for R 2.14.0

Tom Callaway spot at fedoraproject.org
Wed Nov 9 20:11:21 UTC 2011


commit 54a50b1df7b18f16d1d10bfe83997bf215938521
Author: Tom "spot" Callaway <tcallawa at redhat.com>
Date:   Wed Nov 9 15:11:19 2011 -0500

    rebuild for R 2.14.0

 R-GenomicFeatures.spec |   18 ++++++++++++------
 sources                |    2 +-
 2 files changed, 13 insertions(+), 7 deletions(-)
---
diff --git a/R-GenomicFeatures.spec b/R-GenomicFeatures.spec
index 57abc2e..46ecc2f 100644
--- a/R-GenomicFeatures.spec
+++ b/R-GenomicFeatures.spec
@@ -2,19 +2,22 @@
 %global Rvers     2.11.0
 
 Name:             R-%{packname}
-Version:          0.0.9
-Release:          3%{?dist}
+Version:          1.6.1
+Release:          1%{?dist}
 Summary:          A transient package to store various genomic features
 
 Group:            Applications/Engineering 
 License:          Artistic 2.0
-URL:              http://bioconductor.org/packages/release/data/experiment/html/GenomicFeatures.html
-Source0:          http://www.bioconductor.org/packages/release/data/experiment/src/contrib/%{packname}_%{version}.tar.gz
+URL:              http://bioconductor.org/packages/2.9/bioc/html/GenomicFeatures.html
+Source0:          http://bioconductor.org/packages/2.9/bioc/src/contrib/%{packname}_%{version}.tar.gz
 BuildRoot:        %{_tmppath}/%{name}-%{version}-%{release}-root-%(%{__id_u} -n)
 BuildArch:        noarch 
 
-BuildRequires:    R-devel >= %{Rvers} tex(latex) R-IRanges
-Requires:         R-core >= %{Rvers} R-IRanges
+BuildRequires:    R-devel >= %{Rvers} tex(latex) R-IRanges R-GenomicRanges R-AnnotationDbi
+Requires:         R-core >= %{Rvers} R-IRanges R-GenomicRanges R-AnnotationDbi 
+Requires:         R-DBI R-RSQLite R-Biostrings R-BSGenome R-Biobase R-utils
+# New?
+Requires:         R-RCurl R-rtracklayer R-biomaRt
 
 %description
 Various Genome-related features, such as gene boundaries, CpG islands,
@@ -57,6 +60,9 @@ rm -rf %{buildroot}
 %{_datadir}/R/library/GenomicFeatures/help
 
 %changelog
+* Wed Nov  9 2011 Tom Callaway <spot at fedoraproject.org> - 1.6.1-1
+- update to 1.6.1
+
 * Mon Feb 07 2011 Fedora Release Engineering <rel-eng at lists.fedoraproject.org> - 0.0.9-3
 - Rebuilt for https://fedoraproject.org/wiki/Fedora_15_Mass_Rebuild
 
diff --git a/sources b/sources
index 1008bf9..6a6f90c 100644
--- a/sources
+++ b/sources
@@ -1 +1 @@
-b079f50fbf30f71606022dad8f980399  GenomicFeatures_0.0.9.tar.gz
+2f2e23a0adf06f40dc686f79443ac5bc  GenomicFeatures_1.6.1.tar.gz


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