[R-ALL] Import R-ALL into Fedora and update it to 1.4.11

[Pierre-YvesChibon]

commit a3608fcdeba2cddc31ea4a08325d3add8a40b906
Author: Pierre-Yves Chibon <pingou at pingoured.fr>
Date:   Fri Nov 11 16:27:39 2011 +0100

    Import R-ALL into Fedora and update it to 1.4.11

 .gitignore |    1 +
 R-ALL.spec |   59 +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
 sources    |    1 +
 3 files changed, 61 insertions(+), 0 deletions(-)
---
diff --git a/.gitignore b/.gitignore
index e69de29..0e57454 100644
--- a/.gitignore
+++ b/.gitignore
@@ -0,0 +1 @@
+/ALL_1.4.11.tar.gz
diff --git a/R-ALL.spec b/R-ALL.spec
new file mode 100644
index 0000000..549b34b
--- /dev/null
+++ b/R-ALL.spec
@@ -0,0 +1,59 @@
+%global packname  ALL
+%global rlibdir %{_datadir}/R/library
+
+Name:             R-%{packname}
+Version:          1.4.11
+Release:          1%{?dist}
+Summary:          Data of T- and B-cell Acute Lymphocytic Leukemia
+
+Group:            Applications/Engineering 
+License:          Artistic 2.0 
+URL:              http://www.bioconductor.org/packages/release/data/experiment/html/ALL.html
+Source0:          http://www.bioconductor.org/packages/release/data/experiment/src/contrib/%{packname}_%{version}.tar.gz
+
+BuildArch:        noarch
+Requires:         R-core texinfo-tex
+Requires:         R-Biobase >= 2.5.5 R-rpart
+BuildRequires:    R-devel tex(latex) R-Biobase >= 2.5.5 R-rpart texinfo-tex
+
+%description
+Data of T- and B-cell Acute Lymphocytic Leukemia from the Ritz Laboratory
+at the DFCI (includes Apr 2004 versions)
+
+%prep
+%setup -q -c -n %{packname}
+
+%build
+
+%install
+rm -rf %{buildroot}
+mkdir -p %{buildroot}%{rlibdir}
+%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
+test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
+rm -f %{buildroot}%{rlibdir}/R.css
+
+%check
+%{_bindir}/R CMD check %{packname}
+
+%clean
+rm -rf %{buildroot}
+
+%files
+%defattr(-, root, root, -)
+%doc %{rlibdir}/ALL/DESCRIPTION
+%doc %{rlibdir}/ALL/doc
+%doc %{rlibdir}/ALL/html
+%{rlibdir}/ALL/Meta
+%{rlibdir}/ALL/NAMESPACE
+%{rlibdir}/ALL/INDEX
+%{rlibdir}/ALL/R
+%{rlibdir}/ALL/help
+%{rlibdir}/ALL/data
+
+%changelog
+* Fri Nov 11 2011 Pierre-Yves Chibon <pingou at pingoured.fr> - 1.4.11-1
+- Update to 1.4.11
+- Update the license to Artistic 2
+
+* Sat Jan 29 2011 pingou <pingou at pingoured.fr> 1.4.7-1
+- initial package for Fedora
diff --git a/sources b/sources
index e69de29..3f2a7d3 100644
--- a/sources
+++ b/sources
@@ -0,0 +1 @@
+e72938f3b25798d3826dd98b9240f0c0  ALL_1.4.11.tar.gz