[R-IRanges/f18] R3, bootstrap pass

[Tom Callaway]

commit 8ece0d6402de98509cf3dbcd6d2b03424c4df7c1
Author: Tom Callaway <spot at fedoraproject.org>
Date:   Sat Apr 20 09:45:49 2013 -0400

    R3, bootstrap pass

 R-IRanges.spec |   41 +++++++++++++++++++++++++++++++++++------
 sources        |    2 +-
 2 files changed, 36 insertions(+), 7 deletions(-)
---
diff --git a/R-IRanges.spec b/R-IRanges.spec
index a24179a..b80abdc 100644
--- a/R-IRanges.spec
+++ b/R-IRanges.spec
@@ -1,21 +1,29 @@
 %global packname  IRanges
-%global Rvers     2.15.0
+%global Rvers     3.0.0
+%global bootstrap 1
 
 Name:             R-%{packname}
-Version:          1.14.4
+Version:          1.18.0
 Release:          2%{dist}
 Summary:          Low-level containers for storing sets of integer ranges
-
 Group:            Applications/Engineering 
 License:          Artistic 2.0 and Copyright only
 # See https://www.redhat.com/archives/fedora-r-devel-list/2009-April/msg00001.html
 URL:              http://bioconductor.org/packages/release/bioc/html/IRanges.html
 Source0:          http://bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{version}.tar.gz
 BuildRoot:        %{_tmppath}/%{name}-%{version}-%{release}-root-%(%{__id_u} -n)
-
 Requires:         R-core >= %{Rvers} R-methods R-stats R-RUnit R-Matrix R-BiocGenerics
+# We can't require R-GenomicRanges until it has been built (it deps on R-IRanges)
+%if %{bootstrap} < 1
+Requires:         R-GenomicRanges
+%endif
 BuildRequires:    R-devel >= %{Rvers} tex(latex)
-BuildRequires:    R-methods R-stats R-RUnit R-Matrix R-BiocGenerics
+BuildRequires:    R-methods R-stats R-RUnit R-Matrix R-BiocGenerics 
+# R-GenomicRanges is only needed for check, but it makes a dep loop
+%if %{bootstrap} < 1
+BuildRequires:    R-GenomicRanges
+BuildRequires:    R-BSgenome.Celegans.UCSC.ce2
+%endif
 
 %description
 The IRanges class and its extensions are low-level containers
@@ -53,7 +61,9 @@ test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
 rm -rf %{buildroot}%{_libdir}/R/library/R.css
 
 %check
+%if %{bootstrap} < 1
 %{_bindir}/R CMD check %{packname}
+%endif
 
 %clean
 rm -rf %{buildroot}
@@ -79,6 +89,25 @@ rm -rf %{buildroot}
 %{_libdir}/R/library/%{packname}/include
 
 %changelog
+* Mon Apr 15 2013 Tom Callaway <spot at fedoraproject.org> - 1.18.0-2
+- bootstrap pass
+
+* Sun Apr 07 2013 pingou <pingou at pingoured.fr> 1.18.0-1
+- Update to version 1.18.0
+
+* Thu Feb 28 2013 pingou <pingou at pingoured.fr> 1.16.6-1
+- Update to version 1.16.6
+
+* Wed Feb 13 2013 pingou <pingou at pingoured.fr> 1.16.5-1
+- Update to version 1.16.5
+
+* Wed Feb 13 2013 Fedora Release Engineering <rel-eng at lists.fedoraproject.org> - 1.16.4-2
+- Rebuilt for https://fedoraproject.org/wiki/Fedora_19_Mass_Rebuild
+
+* Tue Nov 27 2012 pingou <pingou at pingoured.fr> 1.16.4-1
+- Update to version 1.16.4
+- + BR: R-GenomicRanges
+
 * Mon Jul 23 2012 pingou <pingou at pingoured.fr> 1.14.4-2
 - + BR: R-BiocGenerics
 
@@ -139,7 +168,7 @@ rm -rf %{buildroot}
 * Sat Mar 27 2010 pingou <pingou at pingoured.fr> 1.4.16-1
 - Update to 1.4.16
 
-* Mon Feb 11 2010 pingou <pingou at pingoured.fr> 1.4.11-1
+* Thu Feb 11 2010 pingou <pingou at pingoured.fr> 1.4.11-1
 - Update to 1.4.11
 
 * Mon Feb 01 2010 pingou <pingou at pingoured.fr> 1.4.10-1
diff --git a/sources b/sources
index 5710aac..57573b6 100644
--- a/sources
+++ b/sources
@@ -1 +1 @@
-30b5ee3f6ab7162bf885cf5e6de29e2d  IRanges_1.14.4.tar.gz
+92da8877d5e5585af501f90c7e672690  IRanges_1.18.0.tar.gz