[bowtie] Update licence and reorganise documentation (thanks to Dave Love)

[verdurin]

commit 89027f5c414b75dad723eac960c8a585a07675dd
Author: Adam Huffman <verdurin at fedoraproject.org>
Date:   Wed Dec 4 22:06:44 2013 +0000

    Update licence and reorganise documentation (thanks to Dave Love)

 bowtie.spec |   12 +++++++++---
 1 files changed, 9 insertions(+), 3 deletions(-)
---
diff --git a/bowtie.spec b/bowtie.spec
index 87b6864..9798724 100644
--- a/bowtie.spec
+++ b/bowtie.spec
@@ -1,10 +1,11 @@
 Name:		bowtie
 Version:	1.0.0
-Release:	1%{?dist}
+Release:	2%{?dist}
 Summary:	An ultrafast, memory-efficient short read aligner
 
 Group:		Applications/Engineering
-License:	Artistic 2.0
+# The tinythread component is zlib-like, SeqAn is LGPL
+License:	Artistic 2.0 and zlib and LGPLV3+
 URL:		http://bowtie-bio.sourceforge.net/index.shtml
 Source0:	http://downloads.sourceforge.net/%{name}-bio/%{name}-%{version}-src.zip
 #Patch0:		%{name}-script-shebang.patch
@@ -53,7 +54,7 @@ rm -rf %{buildroot}
 
 %files
 %defattr(-,root,root,-)
-%doc MANUAL NEWS VERSION AUTHORS TUTORIAL doc/
+%doc MANUAL NEWS VERSION AUTHORS TUTORIAL doc/{manual.html,style.css} SeqAn-1.1/*GPL.txt
 %dir %{_datadir}/bowtie
 %{_bindir}/bowtie
 %{_bindir}/bowtie-build
@@ -64,6 +65,11 @@ rm -rf %{buildroot}
 %{_datadir}/bowtie/scripts
 
 %changelog
+* Wed Dec 04 2013 Adam Huffman <bloch at verdurin.com> - 1.0.0-2
+- Correct licence information (thanks to Dave Love)
+- Reorganise documentation (thanks to Dave Love)
+
+
 * Wed Aug 07 2013 Adam Huffman <bloch at verdurin.com> - 1.0.0-1
 - Update to stable upstream release 1.0.0
 - Remove unnecessary script patch