[samtools] Update to new 1.2 source

verdurin verdurin at fedoraproject.org
Sat Feb 21 09:03:44 UTC 2015


commit 26ea4651e5859056c76d7fbd6aa6815cee24d7d0
Author: bloch at verdurin.com <bloch at verdurin.com>
Date:   Sat Feb 21 09:03:24 2015 +0000

    Update to new 1.2 source

 .gitignore    |  1 +
 samtools.spec | 12 ++++++++----
 sources       |  2 +-
 3 files changed, 10 insertions(+), 5 deletions(-)
---
diff --git a/.gitignore b/.gitignore
index e053cc6..24dbd0b 100644
--- a/.gitignore
+++ b/.gitignore
@@ -2,3 +2,4 @@
 /samtools-0.1.16.tar.bz2
 /samtools-0.1.18.tar.bz2
 /samtools-0.1.19.tar.bz2
+/samtools-1.2.tar.bz2
diff --git a/samtools.spec b/samtools.spec
index 9d76f49..6fa79bd 100644
--- a/samtools.spec
+++ b/samtools.spec
@@ -1,12 +1,12 @@
 Name:		samtools
-Version:	0.1.19
-Release:	6%{?dist}
+Version:	1.2
+Release:	1%{?dist}
 Summary:	Tools for nucleotide sequence alignments in the SAM format
 
 Group:		Applications/Engineering
 License:	MIT
-URL:		http://samtools.sourceforge.net/
-Source0:	http://downloads.sourceforge.net/%{name}/%{name}-%{version}.tar.bz2
+URL:		http://www.htslib.org
+Source0:	https://github.com/%{name}/%{name}/releases/download/%{version}/%{name}-%{version}.tar.bz2
 Patch0:		samtools-0.1.14-soname.patch
 Patch1:		samtools-0.1.19-faidx_fetch_seq2.patch
 BuildRoot:	%(mktemp -ud %{_tmppath}/%{name}-%{version}-%{release}-XXXXXX)
@@ -120,6 +120,10 @@ rm -rf %{buildroot}
 
 
 %changelog
+* Sat Feb 21 2015 Adam Huffman <bloch at verdurin.com> - 1.2-1
+- Update to new htslib-based 1.2 release
+- New URL
+
 * Mon Aug 18 2014 Fedora Release Engineering <rel-eng at lists.fedoraproject.org> - 0.1.19-6
 - Rebuilt for https://fedoraproject.org/wiki/Fedora_21_22_Mass_Rebuild
 
diff --git a/sources b/sources
index 3207959..a57b588 100644
--- a/sources
+++ b/sources
@@ -1 +1 @@
-ff8b46e6096cfb452003b1ec5091d86a  samtools-0.1.19.tar.bz2
+988ec4c3058a6ceda36503eebecd4122  samtools-1.2.tar.bz2


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