Fedora 26 Update: openms-2.2.0-5.fc26
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Fedora Update Notification
FEDORA-2017-7416a74fb7
2017-10-25 21:34:15.278897
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Name : openms
Product : Fedora 26
Version : 2.2.0
Release : 5.fc26
URL : http://www.openms.de/
Summary : LC/MS data management and analyses
Description :
OpenMS is a C++ library for LC-MS data management and analyses.
It offers an infrastructure for the rapid development of mass spectrometry
related software. OpenMS is free software available under the three clause BSD
license and runs under Windows, MacOSX and Linux.
It comes with a vast variety of pre-built and ready-to-use tools for proteomics
and metabolomics data analysis (TOPPTools) and
powerful 2D and 3D visualization(TOPPView).
OpenMS offers analyses for various quantitation protocols,
including label-free quantitation, SILAC, iTRAQ, SRM, SWATH, etc.
It provides built-in algorithms for de-novo identification and database search,
as well as adapters to other state-of-the art tools like XTandem, Mascot,
OMSSA, etc.
It supports easy integration of OpenMS built tools into workflow engines like Knime,
Galaxy, WS-Pgrade, and TOPPAS via the TOPPtools concept and
a unified parameter handling via a 'common tool description' (CTD) scheme.
The OpenMS Proteomics Pipeline is a pipeline for
the analysis of HPLC-MS data.
It consists of several small applications that
can be chained to create analysis pipelines tailored
for a specific problem.
The TOPP tools are divided into several subgroups:
- Graphical Tools
- File Handling
- Signal Processing and Preprocessing
- Quantitation
- Map Alignment
- Protein/Peptide Identification
- Protein/Peptide Processing
- Targeted Experiments
- Peptide Property Prediction
- Misc
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Update Information:
- Rebuild for wildmagic5-5.17
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This update can be installed with the "dnf" update program. Use
su -c 'dnf upgrade openms' at the command line.
For more information, refer to the dnf documentation available at
http://dnf.readthedocs.io/en/latest/command_ref.html#upgrade-command-label
All packages are signed with the Fedora Project GPG key. More details on the
GPG keys used by the Fedora Project can be found at
https://fedoraproject.org/keys
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