9:42 a.m.
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Fedora Update Notification
FEDORA-2018-050da4f07f
2018-05-31 14:34:44.120573
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Name : R-Rsamtools
Product : Fedora 28
Version : 1.32.0
Release : 1.fc28
URL : http://www.bioconductor.org/packages/release/bioc/html/Rsamtools.html
Summary : R interface to samtools
Description :
This package provides an interface to the 'samtools', 'bcftools',
and 'tabix' utilities (see 'LICENCE') for manipulating SAM
(Sequence Alignment / Map), binary variant call (BCF) and
compressed indexed tab-delimited (tabix) files.
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Update Information:
Update R to 3.5.0. Rebuild rpy and rkward to match. rpy updated to 2.9.3 in
Fedora 28. All compiled R packages rebuilt (except for R-shogun, because shogun
doesn't build right now). Most updated to the latest version.
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ChangeLog:
* Thu May 17 2018 Tom Callaway <spot(a)fedoraproject.org> - 1.32.0-1
- update to 1.32.0
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References:
[ 1 ] Bug #1567573 - rpy-2.9.3 is available
https://bugzilla.redhat.com/show_bug.cgi?id=1567573
[ 2 ] Bug #1570804 - R-3.5.0 is available
https://bugzilla.redhat.com/show_bug.cgi?id=1570804
[ 3 ] Bug #1555530 - R-affyio: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555530
[ 4 ] Bug #1555528 - R-affy: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555528
[ 5 ] Bug #1555498 - R-Biostrings: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555498
[ 6 ] Bug #1555532 - R-bitops: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555532
[ 7 ] Bug #1555533 - R-caTools: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555533
[ 8 ] Bug #1560254 - R-curl-3.2 is available
https://bugzilla.redhat.com/show_bug.cgi?id=1560254
[ 9 ] Bug #1575172 - R-httpuv-1.4.3 is available
https://bugzilla.redhat.com/show_bug.cgi?id=1575172
[ 10 ] Bug #1563656 - R-lmtest-0.9-36 is available
https://bugzilla.redhat.com/show_bug.cgi?id=1563656
[ 11 ] Bug #1555547 - R-maanova: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555547
[ 12 ] Bug #1555552 - R-msm: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555552
[ 13 ] Bug #1555555 - R-multtest: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555555
[ 14 ] Bug #1555556 - R-mvtnorm: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555556
[ 15 ] Bug #1555561 - R-preprocessCore: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555561
[ 16 ] Bug #1555564 - R-rlecuyer: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555564
[ 17 ] Bug #1555515 - R-ROC: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555515
[ 18 ] Bug #1555516 - R-RODBC: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555516
[ 19 ] Bug #1555521 - R-Rsolid: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555521
[ 20 ] Bug #1555569 - R-statmod: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555569
[ 21 ] Bug #1574116 - R-stringi-1.2.2 is available
https://bugzilla.redhat.com/show_bug.cgi?id=1574116
[ 22 ] Bug #1555574 - R-waveslim: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555574
[ 23 ] Bug #1555575 - R-wavethresh: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555575
[ 24 ] Bug #1555525 - R-XML: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1555525
[ 25 ] Bug #1405667 - R-zoo-1.8-1 is available
https://bugzilla.redhat.com/show_bug.cgi?id=1405667
[ 26 ] Bug #1578961 - Review Request: R-prettyunits - Pretty, Human Readable Formatting
of Quantities
https://bugzilla.redhat.com/show_bug.cgi?id=1578961
[ 27 ] Bug #1578963 - Review Request: R-blob - A Simple S3 Class for Representing
Vectors of Binary Data ('BLOBS')
https://bugzilla.redhat.com/show_bug.cgi?id=1578963
[ 28 ] Bug #1556527 - v8-314: FTBFS in F28
https://bugzilla.redhat.com/show_bug.cgi?id=1556527
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This update can be installed with the "dnf" update program. Use
su -c 'dnf upgrade --advisory FEDORA-2018-050da4f07f' at the command
line. For more information, refer to the dnf documentation available at
http://dnf.readthedocs.io/en/latest/command_ref.html#upgrade-command-label
All packages are signed with the Fedora Project GPG key. More details on the
GPG keys used by the Fedora Project can be found at
https://fedoraproject.org/keys
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