rpms/perl-bioperl/F-12 bioperl-1.6.1-paths.patch, NONE, 1.1 .cvsignore, 1.8, 1.9 perl-bioperl.spec, 1.22, 1.23 sources, 1.9, 1.10
by alexlan
Author: alexlan
Update of /cvs/extras/rpms/perl-bioperl/F-12
In directory cvs1.fedora.phx.redhat.com:/tmp/cvs-serv30473
Modified Files:
.cvsignore perl-bioperl.spec sources
Added Files:
bioperl-1.6.1-paths.patch
Log Message:
- Update to latest upstream 1.6.1
- Add BR: perl(XML::Simple), perl(DBD:SQLite) for new modules
- Disable ExtUtils::Manifest build requirement, don't require a MANIFEST
- Fix doc distributed
bioperl-1.6.1-paths.patch:
BioPerl-1.6.1.mod/Bio/Variation/IO.pm | 2 +-
BioPerl-1.6.1.mod/Bio/Variation/IO.pm.orig |only
BioPerl-1.6.1.mod/Build.PL | 6 +++---
BioPerl-1.6.1.mod/examples/align/align_on_codons.pl | 4 ++--
BioPerl-1.6.1.mod/examples/db/dbfetch | 2 +-
BioPerl-1.6.1.mod/examples/db/getGenBank.pl | 2 +-
BioPerl-1.6.1.mod/examples/db/get_seqs.pl | 2 +-
BioPerl-1.6.1.mod/examples/generate_random_seq.pl | 2 +-
BioPerl-1.6.1.mod/examples/searchio/psiblast_features.pl | 2 +-
BioPerl-1.6.1.mod/examples/structure/structure-io.pl | 2 +-
BioPerl-1.6.1.mod/examples/tk/hitdisplay.pl | 2 +-
BioPerl-1.6.1.mod/examples/tools/gb_to_gff.pl | 2 +-
BioPerl-1.6.1.mod/examples/tools/gff2ps.pl | 2 +-
BioPerl-1.6.1/MANIFEST | 15 ---------------
14 files changed, 15 insertions(+), 30 deletions(-)
--- NEW FILE bioperl-1.6.1-paths.patch ---
diff -u -r BioPerl-1.6.1/Bio/Variation/IO.pm BioPerl-1.6.1.mod/Bio/Variation/IO.pm
--- BioPerl-1.6.1/Bio/Variation/IO.pm 2007-02-14 04:37:48.000000000 -0700
+++ BioPerl-1.6.1.mod/Bio/Variation/IO.pm 2008-09-25 02:03:26.000000000 -0700
@@ -86,7 +86,7 @@
This makes the simplest ever reformatter
- #!/usr/local/bin/perl
+ #!/usr/bin/perl
$format1 = shift;
$format2 = shift;
Only in BioPerl-1.6.1.mod/Bio/Variation: IO.pm.orig
diff -u -r BioPerl-1.6.1/Build.PL BioPerl-1.6.1.mod/Build.PL
--- BioPerl-1.6.1/Build.PL 2009-09-29 12:33:45.000000000 -0400
+++ BioPerl-1.6.1.mod/Build.PL 2009-11-11 22:23:17.000000000 -0500
@@ -31,13 +31,13 @@
'DB_File' => 0,
'Data::Stag' => 0.11, # Bio::SeqIO::swiss, we can change to 'recommend' if needed
'Scalar::Util' => 0, # not in Perl 5.6.1, arrived in core in 5.7.3
- 'ExtUtils::Manifest' => '1.52', # allows spaces in file names
+# 'ExtUtils::Manifest' => '1.52', # allows spaces in file names
},
build_requires => {
'Test::More' => 0,
'Module::Build' => 0.2805,
- 'Test::Harness' => 2.62,
- 'CPAN' => 1.81
+# 'Test::Harness' => 2.62,
+# 'CPAN' => 1.81
},
recommends => { # does what you would expect of recommends, except more informative output and generates optional_features in META.yml
'Ace' => '0/access of ACeDB database/Bio::DB::Ace,Bio::DB::GFF::Adaptor::ace',
diff -u -r BioPerl-1.6.1/examples/align/align_on_codons.pl BioPerl-1.6.1.mod/examples/align/align_on_codons.pl
--- BioPerl-1.6.1/examples/align/align_on_codons.pl 2007-02-14 04:37:47.000000000 -0700
+++ BioPerl-1.6.1.mod/examples/align/align_on_codons.pl 2008-09-25 02:03:26.000000000 -0700
@@ -13,10 +13,10 @@
BEGIN {
$CODONSIZE = 3; # parametrize everything like a good little programmer
if( ! defined $ENV{'CLUSTALDIR'} ) {
- $ENV{'CLUSTALDIR'} = '/usr/local/bin';
+ $ENV{'CLUSTALDIR'} = '/usr/bin';
}
if( ! defined $ENV{'TCOFFEEDIR'} ) {
- $ENV{'TCOFFEEDIR'} = '/usr/local/bin';
+ $ENV{'TCOFFEEDIR'} = '/usr/bin';
}
$USAGE =
qq{align_on_codons.pl < file.fa
diff -u -r BioPerl-1.6.1/examples/db/dbfetch BioPerl-1.6.1.mod/examples/db/dbfetch
--- BioPerl-1.6.1/examples/db/dbfetch 2007-02-14 04:37:48.000000000 -0700
+++ BioPerl-1.6.1.mod/examples/db/dbfetch 2008-09-25 02:03:26.000000000 -0700
@@ -1,4 +1,4 @@
-#!/usr/local/bin/perl -- # -*-Perl-*-
+#!/usr/bin/perl -- # -*-Perl-*-
=head1 NAME
diff -u -r BioPerl-1.6.1/examples/db/getGenBank.pl BioPerl-1.6.1.mod/examples/db/getGenBank.pl
--- BioPerl-1.6.1/examples/db/getGenBank.pl 2007-02-14 04:37:47.000000000 -0700
+++ BioPerl-1.6.1.mod/examples/db/getGenBank.pl 2008-09-25 02:03:26.000000000 -0700
@@ -1,4 +1,4 @@
-#!/usr/local/bin/perl -w
+#!/usr/bin/perl -w
#
# How to retrieve GenBank entries over the Web
#
diff -u -r BioPerl-1.6.1/examples/db/get_seqs.pl BioPerl-1.6.1.mod/examples/db/get_seqs.pl
--- BioPerl-1.6.1/examples/db/get_seqs.pl 2007-02-14 04:37:48.000000000 -0700
+++ BioPerl-1.6.1.mod/examples/db/get_seqs.pl 2008-09-25 02:03:26.000000000 -0700
@@ -1,4 +1,4 @@
-#!/usr/local/bin/perl -w
+#!/usr/bin/perl -w
use strict;
use vars qw($USAGE);
use Carp;
diff -u -r BioPerl-1.6.1/examples/generate_random_seq.pl BioPerl-1.6.1.mod/examples/generate_random_seq.pl
--- BioPerl-1.6.1/examples/generate_random_seq.pl 2007-02-14 04:37:47.000000000 -0700
+++ BioPerl-1.6.1.mod/examples/generate_random_seq.pl 2008-09-25 02:03:26.000000000 -0700
@@ -1,4 +1,4 @@
-#!/bin/perl -w
+#!/usr/bin/perl -w
use strict;
use vars qw($USAGE);
diff -u -r BioPerl-1.6.1/examples/searchio/psiblast_features.pl BioPerl-1.6.1.mod/examples/searchio/psiblast_features.pl
--- BioPerl-1.6.1/examples/searchio/psiblast_features.pl 2007-02-14 04:37:48.000000000 -0700
+++ BioPerl-1.6.1.mod/examples/searchio/psiblast_features.pl 2008-09-25 02:03:26.000000000 -0700
@@ -1,4 +1,4 @@
-#!/usr/local/bin/perl
+#!/usr/bin/perl
# Example usage of a SearchIO::psiblast parser of traditional format Blast
# and PSI-Blast reports.
diff -u -r BioPerl-1.6.1/examples/structure/structure-io.pl BioPerl-1.6.1.mod/examples/structure/structure-io.pl
--- BioPerl-1.6.1/examples/structure/structure-io.pl 2007-02-14 04:37:48.000000000 -0700
+++ BioPerl-1.6.1.mod/examples/structure/structure-io.pl 2008-09-25 02:03:26.000000000 -0700
@@ -1,4 +1,4 @@
-#!/bin/perl -w
+#!/usr/bin/perl -w
# Getting Entry, Chain, Residue, and Atom objects given a PDB file
use Bio::Structure::IO;
diff -u -r BioPerl-1.6.1/examples/tk/hitdisplay.pl BioPerl-1.6.1.mod/examples/tk/hitdisplay.pl
--- BioPerl-1.6.1/examples/tk/hitdisplay.pl 2007-02-14 04:37:47.000000000 -0700
+++ BioPerl-1.6.1.mod/examples/tk/hitdisplay.pl 2008-09-25 02:03:26.000000000 -0700
@@ -1,4 +1,4 @@
-#!/usr/local/bin/perl -w
+#!/usr/bin/perl -w
#
# PROGRAM : hitdisplay.pl
# PURPOSE : Demonstrate Bio::Tk::HitDisplay
diff -u -r BioPerl-1.6.1/examples/tools/gb_to_gff.pl BioPerl-1.6.1.mod/examples/tools/gb_to_gff.pl
--- BioPerl-1.6.1/examples/tools/gb_to_gff.pl 2007-02-14 04:37:47.000000000 -0700
+++ BioPerl-1.6.1.mod/examples/tools/gb_to_gff.pl 2008-09-25 02:03:26.000000000 -0700
@@ -1,4 +1,4 @@
-#!/usr/local/bin/perl -w
+#!/usr/bin/perl -w
use strict;
use Bio::Tools::GFF;
diff -u -r BioPerl-1.6.1/examples/tools/gff2ps.pl BioPerl-1.6.1.mod/examples/tools/gff2ps.pl
--- BioPerl-1.6.1/examples/tools/gff2ps.pl 2007-02-14 04:37:47.000000000 -0700
+++ BioPerl-1.6.1.mod/examples/tools/gff2ps.pl 2008-09-25 02:03:26.000000000 -0700
@@ -1,4 +1,4 @@
-#!/usr/local/bin/perl
+#!/usr/bin/perl
=head1 NAME
--- BioPerl-1.6.1/MANIFEST.orig 2008-12-27 20:29:43.000000000 -0700
+++ BioPerl-1.6.1/MANIFEST 2008-12-27 20:31:23.000000000 -0700
@@ -424,15 +424,6 @@
Bio/Phenotype/OMIM/OMIMparser.pm
Bio/Phenotype/Phenotype.pm
Bio/Phenotype/PhenotypeI.pm
-Bio/PhyloNetwork.pm
-Bio/PhyloNetwork/Factory.pm
-Bio/PhyloNetwork/FactoryX.pm
-Bio/PhyloNetwork/GraphViz.pm
-Bio/PhyloNetwork/muVector.pm
-Bio/PhyloNetwork/RandomFactory.pm
-Bio/PhyloNetwork/TreeFactory.pm
-Bio/PhyloNetwork/TreeFactoryMulti.pm
-Bio/PhyloNetwork/TreeFactoryX.pm
Bio/PopGen/Genotype.pm
Bio/PopGen/GenotypeI.pm
Bio/PopGen/HtSNP.pm
@@ -1994,12 +1985,6 @@
t/Tools/tRNAscanSE.t
t/Tree/Compatible.t
t/Tree/Node.t
-t/Tree/PhyloNetwork/Factory.t
-t/Tree/PhyloNetwork/GraphViz.t
-t/Tree/PhyloNetwork/MuVector.t
-t/Tree/PhyloNetwork/PhyloNetwork.t
-t/Tree/PhyloNetwork/RandomFactory.t
-t/Tree/PhyloNetwork/TreeFactory.t
t/Tree/RandomTreeFactory.t
t/Tree/Tree.t
t/Tree/TreeIO.t
Index: .cvsignore
===================================================================
RCS file: /cvs/extras/rpms/perl-bioperl/F-12/.cvsignore,v
retrieving revision 1.8
retrieving revision 1.9
diff -u -p -r1.8 -r1.9
--- .cvsignore 26 Jan 2009 07:28:04 -0000 1.8
+++ .cvsignore 12 Nov 2009 04:23:00 -0000 1.9
@@ -1 +1 @@
-BioPerl-1.6.0.tar.bz2
+BioPerl-1.6.1.tar.bz2
Index: perl-bioperl.spec
===================================================================
RCS file: /cvs/extras/rpms/perl-bioperl/F-12/perl-bioperl.spec,v
retrieving revision 1.22
retrieving revision 1.23
diff -u -p -r1.22 -r1.23
--- perl-bioperl.spec 26 Jul 2009 17:44:46 -0000 1.22
+++ perl-bioperl.spec 12 Nov 2009 04:23:00 -0000 1.23
@@ -1,13 +1,13 @@
Name: perl-bioperl
-Version: 1.6.0
-Release: 3%{?dist}
+Version: 1.6.1
+Release: 1%{?dist}
Summary: Perl tools for computational molecular biology
Group: Development/Libraries
License: GPL+ or Artistic
URL: http://www.bioperl.org/
Source0: http://bioperl.org/DIST/BioPerl-%{version}.tar.bz2
-Patch0: bioperl-1.5.9-paths.patch
+Patch0: bioperl-1.6.1-paths.patch
BuildRoot: %{_tmppath}/%{name}-%{version}-%{release}-root-%(%{__id_u} -n)
BuildArch: noarch
@@ -18,6 +18,7 @@ BuildRequires: perl(Convert::Binary::C)
BuildRequires: perl(Data::Stag::XMLWriter)
BuildRequires: perl(DBD::mysql)
BuildRequires: perl(DBD::Pg)
+BuildRequires: perl(DBD::SQLite)
BuildRequires: perl(GD) >= 1.3
BuildRequires: perl(GD::SVG)
BuildRequires: perl(Graph)
@@ -41,6 +42,7 @@ BuildRequires: perl(XML::Parser)
BuildRequires: perl(XML::Parser::PerlSAX)
BuildRequires: perl(XML::SAX) >= 0.14
BuildRequires: perl(XML::SAX::Writer)
+BuildRequires: perl(XML::Simple)
BuildRequires: perl(XML::Twig)
BuildRequires: perl(XML::Writer) > 0.4
BuildRequires: perl(Module::Build)
@@ -122,13 +124,19 @@ rm -rf $RPM_BUILD_ROOT
%defattr(-,root,root,-)
## don't distribute "doc" subdirectory, doesn't contain docs
%doc examples models
-%doc AUTHORS BUGS Changes DEPRECATED INSTALL LICENSE PLATFORMS README
+%doc AUTHORS BUGS Changes DEPRECATED INSTALL LICENSE README
%{_bindir}/*
%{perl_vendorlib}/*
%{_mandir}/man1/*.1*
%{_mandir}/man3/*.3*
%changelog
+* Wed Nov 4 2009 Alex Lancaster <alexlan[AT]fedoraproject org> - 1.6.1-1
+- Update to latest upstream 1.6.1
+- Add BR: perl(XML::Simple), perl(DBD:SQLite) for new modules
+- Disable ExtUtils::Manifest build requirement, don't require a MANIFEST
+- Fix doc distributed
+
* Sun Jul 26 2009 Fedora Release Engineering <rel-eng(a)lists.fedoraproject.org> - 1.6.0-3
- Rebuilt for https://fedoraproject.org/wiki/Fedora_12_Mass_Rebuild
Index: sources
===================================================================
RCS file: /cvs/extras/rpms/perl-bioperl/F-12/sources,v
retrieving revision 1.9
retrieving revision 1.10
diff -u -p -r1.9 -r1.10
--- sources 26 Jan 2009 07:28:04 -0000 1.9
+++ sources 12 Nov 2009 04:23:00 -0000 1.10
@@ -1 +1 @@
-b5bc873aa990892651c3092d7e504397 BioPerl-1.6.0.tar.bz2
+d629dbdb3efca353f8f52108f41c09e0 BioPerl-1.6.1.tar.bz2
14 years, 5 months
rpms/perl-bioperl/devel bioperl-1.6.1-paths.patch, NONE, 1.1 .cvsignore, 1.8, 1.9 perl-bioperl.spec, 1.22, 1.23 sources, 1.9, 1.10
by alexlan
Author: alexlan
Update of /cvs/extras/rpms/perl-bioperl/devel
In directory cvs1.fedora.phx.redhat.com:/tmp/cvs-serv20247
Modified Files:
.cvsignore perl-bioperl.spec sources
Added Files:
bioperl-1.6.1-paths.patch
Log Message:
- Update to latest upstream 1.6.1
- Add BR: perl(XML::Simple), perl(DBD:SQLite) for new modules
- Disable ExtUtils::Manifest build requirement, don't require a MANIFEST
- Fix doc distributed
bioperl-1.6.1-paths.patch:
BioPerl-1.6.1.mod/Bio/Variation/IO.pm | 2 +-
BioPerl-1.6.1.mod/Bio/Variation/IO.pm.orig |only
BioPerl-1.6.1.mod/Build.PL | 6 +++---
BioPerl-1.6.1.mod/examples/align/align_on_codons.pl | 4 ++--
BioPerl-1.6.1.mod/examples/db/dbfetch | 2 +-
BioPerl-1.6.1.mod/examples/db/getGenBank.pl | 2 +-
BioPerl-1.6.1.mod/examples/db/get_seqs.pl | 2 +-
BioPerl-1.6.1.mod/examples/generate_random_seq.pl | 2 +-
BioPerl-1.6.1.mod/examples/searchio/psiblast_features.pl | 2 +-
BioPerl-1.6.1.mod/examples/structure/structure-io.pl | 2 +-
BioPerl-1.6.1.mod/examples/tk/hitdisplay.pl | 2 +-
BioPerl-1.6.1.mod/examples/tools/gb_to_gff.pl | 2 +-
BioPerl-1.6.1.mod/examples/tools/gff2ps.pl | 2 +-
BioPerl-1.6.1/MANIFEST | 15 ---------------
14 files changed, 15 insertions(+), 30 deletions(-)
--- NEW FILE bioperl-1.6.1-paths.patch ---
diff -u -r BioPerl-1.6.1/Bio/Variation/IO.pm BioPerl-1.6.1.mod/Bio/Variation/IO.pm
--- BioPerl-1.6.1/Bio/Variation/IO.pm 2007-02-14 04:37:48.000000000 -0700
+++ BioPerl-1.6.1.mod/Bio/Variation/IO.pm 2008-09-25 02:03:26.000000000 -0700
@@ -86,7 +86,7 @@
This makes the simplest ever reformatter
- #!/usr/local/bin/perl
+ #!/usr/bin/perl
$format1 = shift;
$format2 = shift;
Only in BioPerl-1.6.1.mod/Bio/Variation: IO.pm.orig
diff -u -r BioPerl-1.6.1/Build.PL BioPerl-1.6.1.mod/Build.PL
--- BioPerl-1.6.1/Build.PL 2009-09-29 12:33:45.000000000 -0400
+++ BioPerl-1.6.1.mod/Build.PL 2009-11-11 22:23:17.000000000 -0500
@@ -31,13 +31,13 @@
'DB_File' => 0,
'Data::Stag' => 0.11, # Bio::SeqIO::swiss, we can change to 'recommend' if needed
'Scalar::Util' => 0, # not in Perl 5.6.1, arrived in core in 5.7.3
- 'ExtUtils::Manifest' => '1.52', # allows spaces in file names
+# 'ExtUtils::Manifest' => '1.52', # allows spaces in file names
},
build_requires => {
'Test::More' => 0,
'Module::Build' => 0.2805,
- 'Test::Harness' => 2.62,
- 'CPAN' => 1.81
+# 'Test::Harness' => 2.62,
+# 'CPAN' => 1.81
},
recommends => { # does what you would expect of recommends, except more informative output and generates optional_features in META.yml
'Ace' => '0/access of ACeDB database/Bio::DB::Ace,Bio::DB::GFF::Adaptor::ace',
diff -u -r BioPerl-1.6.1/examples/align/align_on_codons.pl BioPerl-1.6.1.mod/examples/align/align_on_codons.pl
--- BioPerl-1.6.1/examples/align/align_on_codons.pl 2007-02-14 04:37:47.000000000 -0700
+++ BioPerl-1.6.1.mod/examples/align/align_on_codons.pl 2008-09-25 02:03:26.000000000 -0700
@@ -13,10 +13,10 @@
BEGIN {
$CODONSIZE = 3; # parametrize everything like a good little programmer
if( ! defined $ENV{'CLUSTALDIR'} ) {
- $ENV{'CLUSTALDIR'} = '/usr/local/bin';
+ $ENV{'CLUSTALDIR'} = '/usr/bin';
}
if( ! defined $ENV{'TCOFFEEDIR'} ) {
- $ENV{'TCOFFEEDIR'} = '/usr/local/bin';
+ $ENV{'TCOFFEEDIR'} = '/usr/bin';
}
$USAGE =
qq{align_on_codons.pl < file.fa
diff -u -r BioPerl-1.6.1/examples/db/dbfetch BioPerl-1.6.1.mod/examples/db/dbfetch
--- BioPerl-1.6.1/examples/db/dbfetch 2007-02-14 04:37:48.000000000 -0700
+++ BioPerl-1.6.1.mod/examples/db/dbfetch 2008-09-25 02:03:26.000000000 -0700
@@ -1,4 +1,4 @@
-#!/usr/local/bin/perl -- # -*-Perl-*-
+#!/usr/bin/perl -- # -*-Perl-*-
=head1 NAME
diff -u -r BioPerl-1.6.1/examples/db/getGenBank.pl BioPerl-1.6.1.mod/examples/db/getGenBank.pl
--- BioPerl-1.6.1/examples/db/getGenBank.pl 2007-02-14 04:37:47.000000000 -0700
+++ BioPerl-1.6.1.mod/examples/db/getGenBank.pl 2008-09-25 02:03:26.000000000 -0700
@@ -1,4 +1,4 @@
-#!/usr/local/bin/perl -w
+#!/usr/bin/perl -w
#
# How to retrieve GenBank entries over the Web
#
diff -u -r BioPerl-1.6.1/examples/db/get_seqs.pl BioPerl-1.6.1.mod/examples/db/get_seqs.pl
--- BioPerl-1.6.1/examples/db/get_seqs.pl 2007-02-14 04:37:48.000000000 -0700
+++ BioPerl-1.6.1.mod/examples/db/get_seqs.pl 2008-09-25 02:03:26.000000000 -0700
@@ -1,4 +1,4 @@
-#!/usr/local/bin/perl -w
+#!/usr/bin/perl -w
use strict;
use vars qw($USAGE);
use Carp;
diff -u -r BioPerl-1.6.1/examples/generate_random_seq.pl BioPerl-1.6.1.mod/examples/generate_random_seq.pl
--- BioPerl-1.6.1/examples/generate_random_seq.pl 2007-02-14 04:37:47.000000000 -0700
+++ BioPerl-1.6.1.mod/examples/generate_random_seq.pl 2008-09-25 02:03:26.000000000 -0700
@@ -1,4 +1,4 @@
-#!/bin/perl -w
+#!/usr/bin/perl -w
use strict;
use vars qw($USAGE);
diff -u -r BioPerl-1.6.1/examples/searchio/psiblast_features.pl BioPerl-1.6.1.mod/examples/searchio/psiblast_features.pl
--- BioPerl-1.6.1/examples/searchio/psiblast_features.pl 2007-02-14 04:37:48.000000000 -0700
+++ BioPerl-1.6.1.mod/examples/searchio/psiblast_features.pl 2008-09-25 02:03:26.000000000 -0700
@@ -1,4 +1,4 @@
-#!/usr/local/bin/perl
+#!/usr/bin/perl
# Example usage of a SearchIO::psiblast parser of traditional format Blast
# and PSI-Blast reports.
diff -u -r BioPerl-1.6.1/examples/structure/structure-io.pl BioPerl-1.6.1.mod/examples/structure/structure-io.pl
--- BioPerl-1.6.1/examples/structure/structure-io.pl 2007-02-14 04:37:48.000000000 -0700
+++ BioPerl-1.6.1.mod/examples/structure/structure-io.pl 2008-09-25 02:03:26.000000000 -0700
@@ -1,4 +1,4 @@
-#!/bin/perl -w
+#!/usr/bin/perl -w
# Getting Entry, Chain, Residue, and Atom objects given a PDB file
use Bio::Structure::IO;
diff -u -r BioPerl-1.6.1/examples/tk/hitdisplay.pl BioPerl-1.6.1.mod/examples/tk/hitdisplay.pl
--- BioPerl-1.6.1/examples/tk/hitdisplay.pl 2007-02-14 04:37:47.000000000 -0700
+++ BioPerl-1.6.1.mod/examples/tk/hitdisplay.pl 2008-09-25 02:03:26.000000000 -0700
@@ -1,4 +1,4 @@
-#!/usr/local/bin/perl -w
+#!/usr/bin/perl -w
#
# PROGRAM : hitdisplay.pl
# PURPOSE : Demonstrate Bio::Tk::HitDisplay
diff -u -r BioPerl-1.6.1/examples/tools/gb_to_gff.pl BioPerl-1.6.1.mod/examples/tools/gb_to_gff.pl
--- BioPerl-1.6.1/examples/tools/gb_to_gff.pl 2007-02-14 04:37:47.000000000 -0700
+++ BioPerl-1.6.1.mod/examples/tools/gb_to_gff.pl 2008-09-25 02:03:26.000000000 -0700
@@ -1,4 +1,4 @@
-#!/usr/local/bin/perl -w
+#!/usr/bin/perl -w
use strict;
use Bio::Tools::GFF;
diff -u -r BioPerl-1.6.1/examples/tools/gff2ps.pl BioPerl-1.6.1.mod/examples/tools/gff2ps.pl
--- BioPerl-1.6.1/examples/tools/gff2ps.pl 2007-02-14 04:37:47.000000000 -0700
+++ BioPerl-1.6.1.mod/examples/tools/gff2ps.pl 2008-09-25 02:03:26.000000000 -0700
@@ -1,4 +1,4 @@
-#!/usr/local/bin/perl
+#!/usr/bin/perl
=head1 NAME
--- BioPerl-1.6.1/MANIFEST.orig 2008-12-27 20:29:43.000000000 -0700
+++ BioPerl-1.6.1/MANIFEST 2008-12-27 20:31:23.000000000 -0700
@@ -424,15 +424,6 @@
Bio/Phenotype/OMIM/OMIMparser.pm
Bio/Phenotype/Phenotype.pm
Bio/Phenotype/PhenotypeI.pm
-Bio/PhyloNetwork.pm
-Bio/PhyloNetwork/Factory.pm
-Bio/PhyloNetwork/FactoryX.pm
-Bio/PhyloNetwork/GraphViz.pm
-Bio/PhyloNetwork/muVector.pm
-Bio/PhyloNetwork/RandomFactory.pm
-Bio/PhyloNetwork/TreeFactory.pm
-Bio/PhyloNetwork/TreeFactoryMulti.pm
-Bio/PhyloNetwork/TreeFactoryX.pm
Bio/PopGen/Genotype.pm
Bio/PopGen/GenotypeI.pm
Bio/PopGen/HtSNP.pm
@@ -1994,12 +1985,6 @@
t/Tools/tRNAscanSE.t
t/Tree/Compatible.t
t/Tree/Node.t
-t/Tree/PhyloNetwork/Factory.t
-t/Tree/PhyloNetwork/GraphViz.t
-t/Tree/PhyloNetwork/MuVector.t
-t/Tree/PhyloNetwork/PhyloNetwork.t
-t/Tree/PhyloNetwork/RandomFactory.t
-t/Tree/PhyloNetwork/TreeFactory.t
t/Tree/RandomTreeFactory.t
t/Tree/Tree.t
t/Tree/TreeIO.t
Index: .cvsignore
===================================================================
RCS file: /cvs/extras/rpms/perl-bioperl/devel/.cvsignore,v
retrieving revision 1.8
retrieving revision 1.9
diff -u -p -r1.8 -r1.9
--- .cvsignore 26 Jan 2009 07:28:04 -0000 1.8
+++ .cvsignore 12 Nov 2009 04:09:41 -0000 1.9
@@ -1 +1 @@
-BioPerl-1.6.0.tar.bz2
+BioPerl-1.6.1.tar.bz2
Index: perl-bioperl.spec
===================================================================
RCS file: /cvs/extras/rpms/perl-bioperl/devel/perl-bioperl.spec,v
retrieving revision 1.22
retrieving revision 1.23
diff -u -p -r1.22 -r1.23
--- perl-bioperl.spec 26 Jul 2009 17:44:46 -0000 1.22
+++ perl-bioperl.spec 12 Nov 2009 04:09:42 -0000 1.23
@@ -1,13 +1,13 @@
Name: perl-bioperl
-Version: 1.6.0
-Release: 3%{?dist}
+Version: 1.6.1
+Release: 1%{?dist}
Summary: Perl tools for computational molecular biology
Group: Development/Libraries
License: GPL+ or Artistic
URL: http://www.bioperl.org/
Source0: http://bioperl.org/DIST/BioPerl-%{version}.tar.bz2
-Patch0: bioperl-1.5.9-paths.patch
+Patch0: bioperl-1.6.1-paths.patch
BuildRoot: %{_tmppath}/%{name}-%{version}-%{release}-root-%(%{__id_u} -n)
BuildArch: noarch
@@ -18,6 +18,7 @@ BuildRequires: perl(Convert::Binary::C)
BuildRequires: perl(Data::Stag::XMLWriter)
BuildRequires: perl(DBD::mysql)
BuildRequires: perl(DBD::Pg)
+BuildRequires: perl(DBD::SQLite)
BuildRequires: perl(GD) >= 1.3
BuildRequires: perl(GD::SVG)
BuildRequires: perl(Graph)
@@ -41,6 +42,7 @@ BuildRequires: perl(XML::Parser)
BuildRequires: perl(XML::Parser::PerlSAX)
BuildRequires: perl(XML::SAX) >= 0.14
BuildRequires: perl(XML::SAX::Writer)
+BuildRequires: perl(XML::Simple)
BuildRequires: perl(XML::Twig)
BuildRequires: perl(XML::Writer) > 0.4
BuildRequires: perl(Module::Build)
@@ -122,13 +124,19 @@ rm -rf $RPM_BUILD_ROOT
%defattr(-,root,root,-)
## don't distribute "doc" subdirectory, doesn't contain docs
%doc examples models
-%doc AUTHORS BUGS Changes DEPRECATED INSTALL LICENSE PLATFORMS README
+%doc AUTHORS BUGS Changes DEPRECATED INSTALL LICENSE README
%{_bindir}/*
%{perl_vendorlib}/*
%{_mandir}/man1/*.1*
%{_mandir}/man3/*.3*
%changelog
+* Wed Nov 4 2009 Alex Lancaster <alexlan[AT]fedoraproject org> - 1.6.1-1
+- Update to latest upstream 1.6.1
+- Add BR: perl(XML::Simple), perl(DBD:SQLite) for new modules
+- Disable ExtUtils::Manifest build requirement, don't require a MANIFEST
+- Fix doc distributed
+
* Sun Jul 26 2009 Fedora Release Engineering <rel-eng(a)lists.fedoraproject.org> - 1.6.0-3
- Rebuilt for https://fedoraproject.org/wiki/Fedora_12_Mass_Rebuild
Index: sources
===================================================================
RCS file: /cvs/extras/rpms/perl-bioperl/devel/sources,v
retrieving revision 1.9
retrieving revision 1.10
diff -u -p -r1.9 -r1.10
--- sources 26 Jan 2009 07:28:04 -0000 1.9
+++ sources 12 Nov 2009 04:09:42 -0000 1.10
@@ -1 +1 @@
-b5bc873aa990892651c3092d7e504397 BioPerl-1.6.0.tar.bz2
+d629dbdb3efca353f8f52108f41c09e0 BioPerl-1.6.1.tar.bz2
14 years, 5 months
rpms/perl-Guard/EL-5 import.log, NONE, 1.1 perl-Guard.spec, NONE, 1.1 .cvsignore, 1.1, 1.2 sources, 1.1, 1.2
by Nicolas Chauvet
Author: kwizart
Update of /cvs/pkgs/rpms/perl-Guard/EL-5
In directory cvs1.fedora.phx.redhat.com:/tmp/cvs-serv1263/EL-5
Modified Files:
.cvsignore sources
Added Files:
import.log perl-Guard.spec
Log Message:
Initial import
--- NEW FILE import.log ---
perl-Guard-1_021-1_fc12:EL-5:perl-Guard-1.021-1.fc12.src.rpm:1257937411
--- NEW FILE perl-Guard.spec ---
Name: perl-Guard
Version: 1.021
Release: 1%{?dist}
Summary: Safe cleanup blocks
License: GPL+ or Artistic
Group: Development/Libraries
URL: http://search.cpan.org/dist/Guard/
Source0: http://www.cpan.org/authors/id/M/ML/MLEHMANN/Guard-%{version}.tar.gz
BuildRoot: %{_tmppath}/%{name}-%{version}-%{release}-root-%(%{__id_u} -n)
BuildRequires: perl(ExtUtils::MakeMaker)
Requires: perl(:MODULE_COMPAT_%(eval "`%{__perl} -V:version`"; echo $version))
%description
This module implements so-called "guards". A guard is something
(usually an object) that "guards" a resource, ensuring that it is
cleaned up when expected.
%prep
%setup -q -n Guard-%{version}
%build
%{__perl} Makefile.PL INSTALLDIRS=vendor OPTIMIZE="$RPM_OPT_FLAGS"
make %{?_smp_mflags}
%install
rm -rf $RPM_BUILD_ROOT
make pure_install PERL_INSTALL_ROOT=$RPM_BUILD_ROOT
find $RPM_BUILD_ROOT -type f -name .packlist -exec rm -f {} \;
find $RPM_BUILD_ROOT -type f -name '*.bs' -size 0 -exec rm -f {} \;
find $RPM_BUILD_ROOT -depth -type d -exec rmdir {} 2>/dev/null \;
%{_fixperms} $RPM_BUILD_ROOT/*
%check
make test
%clean
rm -rf $RPM_BUILD_ROOT
%files
%defattr(-,root,root,-)
%doc Changes COPYING README
%{perl_vendorarch}/auto/*
%{perl_vendorarch}/Guard*
%{_mandir}/man3/*
%changelog
* Sun Nov 08 2009 Nicolas Chuavet <kwizart(a)fedoraproject.org> - 1.021-1
- Specfile autogenerated by cpanspec 1.78.
Index: .cvsignore
===================================================================
RCS file: /cvs/pkgs/rpms/perl-Guard/EL-5/.cvsignore,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -p -r1.1 -r1.2
--- .cvsignore 11 Nov 2009 03:50:04 -0000 1.1
+++ .cvsignore 11 Nov 2009 11:05:45 -0000 1.2
@@ -0,0 +1 @@
+Guard-1.021.tar.gz
Index: sources
===================================================================
RCS file: /cvs/pkgs/rpms/perl-Guard/EL-5/sources,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -p -r1.1 -r1.2
--- sources 11 Nov 2009 03:50:04 -0000 1.1
+++ sources 11 Nov 2009 11:05:46 -0000 1.2
@@ -0,0 +1 @@
+6c15e885c089115f8263a5873ed74f1e Guard-1.021.tar.gz
14 years, 5 months
rpms/perl-Guard/F-10 import.log, NONE, 1.1 perl-Guard.spec, NONE, 1.1 .cvsignore, 1.1, 1.2 sources, 1.1, 1.2
by Nicolas Chauvet
Author: kwizart
Update of /cvs/pkgs/rpms/perl-Guard/F-10
In directory cvs1.fedora.phx.redhat.com:/tmp/cvs-serv32356/F-10
Modified Files:
.cvsignore sources
Added Files:
import.log perl-Guard.spec
Log Message:
Initial import
--- NEW FILE import.log ---
perl-Guard-1_021-1_fc12:F-10:perl-Guard-1.021-1.fc12.src.rpm:1257937253
--- NEW FILE perl-Guard.spec ---
Name: perl-Guard
Version: 1.021
Release: 1%{?dist}
Summary: Safe cleanup blocks
License: GPL+ or Artistic
Group: Development/Libraries
URL: http://search.cpan.org/dist/Guard/
Source0: http://www.cpan.org/authors/id/M/ML/MLEHMANN/Guard-%{version}.tar.gz
BuildRoot: %{_tmppath}/%{name}-%{version}-%{release}-root-%(%{__id_u} -n)
BuildRequires: perl(ExtUtils::MakeMaker)
Requires: perl(:MODULE_COMPAT_%(eval "`%{__perl} -V:version`"; echo $version))
%description
This module implements so-called "guards". A guard is something
(usually an object) that "guards" a resource, ensuring that it is
cleaned up when expected.
%prep
%setup -q -n Guard-%{version}
%build
%{__perl} Makefile.PL INSTALLDIRS=vendor OPTIMIZE="$RPM_OPT_FLAGS"
make %{?_smp_mflags}
%install
rm -rf $RPM_BUILD_ROOT
make pure_install PERL_INSTALL_ROOT=$RPM_BUILD_ROOT
find $RPM_BUILD_ROOT -type f -name .packlist -exec rm -f {} \;
find $RPM_BUILD_ROOT -type f -name '*.bs' -size 0 -exec rm -f {} \;
find $RPM_BUILD_ROOT -depth -type d -exec rmdir {} 2>/dev/null \;
%{_fixperms} $RPM_BUILD_ROOT/*
%check
make test
%clean
rm -rf $RPM_BUILD_ROOT
%files
%defattr(-,root,root,-)
%doc Changes COPYING README
%{perl_vendorarch}/auto/*
%{perl_vendorarch}/Guard*
%{_mandir}/man3/*
%changelog
* Sun Nov 08 2009 Nicolas Chuavet <kwizart(a)fedoraproject.org> - 1.021-1
- Specfile autogenerated by cpanspec 1.78.
Index: .cvsignore
===================================================================
RCS file: /cvs/pkgs/rpms/perl-Guard/F-10/.cvsignore,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -p -r1.1 -r1.2
--- .cvsignore 11 Nov 2009 03:50:04 -0000 1.1
+++ .cvsignore 11 Nov 2009 11:01:36 -0000 1.2
@@ -0,0 +1 @@
+Guard-1.021.tar.gz
Index: sources
===================================================================
RCS file: /cvs/pkgs/rpms/perl-Guard/F-10/sources,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -p -r1.1 -r1.2
--- sources 11 Nov 2009 03:50:04 -0000 1.1
+++ sources 11 Nov 2009 11:01:36 -0000 1.2
@@ -0,0 +1 @@
+6c15e885c089115f8263a5873ed74f1e Guard-1.021.tar.gz
14 years, 5 months
rpms/perl-Guard/F-11 import.log, NONE, 1.1 perl-Guard.spec, NONE, 1.1 .cvsignore, 1.1, 1.2 sources, 1.1, 1.2
by Nicolas Chauvet
Author: kwizart
Update of /cvs/pkgs/rpms/perl-Guard/F-11
In directory cvs1.fedora.phx.redhat.com:/tmp/cvs-serv31809/F-11
Modified Files:
.cvsignore sources
Added Files:
import.log perl-Guard.spec
Log Message:
Initial import
--- NEW FILE import.log ---
perl-Guard-1_021-1_fc12:F-11:perl-Guard-1.021-1.fc12.src.rpm:1257937177
--- NEW FILE perl-Guard.spec ---
Name: perl-Guard
Version: 1.021
Release: 1%{?dist}
Summary: Safe cleanup blocks
License: GPL+ or Artistic
Group: Development/Libraries
URL: http://search.cpan.org/dist/Guard/
Source0: http://www.cpan.org/authors/id/M/ML/MLEHMANN/Guard-%{version}.tar.gz
BuildRoot: %{_tmppath}/%{name}-%{version}-%{release}-root-%(%{__id_u} -n)
BuildRequires: perl(ExtUtils::MakeMaker)
Requires: perl(:MODULE_COMPAT_%(eval "`%{__perl} -V:version`"; echo $version))
%description
This module implements so-called "guards". A guard is something
(usually an object) that "guards" a resource, ensuring that it is
cleaned up when expected.
%prep
%setup -q -n Guard-%{version}
%build
%{__perl} Makefile.PL INSTALLDIRS=vendor OPTIMIZE="$RPM_OPT_FLAGS"
make %{?_smp_mflags}
%install
rm -rf $RPM_BUILD_ROOT
make pure_install PERL_INSTALL_ROOT=$RPM_BUILD_ROOT
find $RPM_BUILD_ROOT -type f -name .packlist -exec rm -f {} \;
find $RPM_BUILD_ROOT -type f -name '*.bs' -size 0 -exec rm -f {} \;
find $RPM_BUILD_ROOT -depth -type d -exec rmdir {} 2>/dev/null \;
%{_fixperms} $RPM_BUILD_ROOT/*
%check
make test
%clean
rm -rf $RPM_BUILD_ROOT
%files
%defattr(-,root,root,-)
%doc Changes COPYING README
%{perl_vendorarch}/auto/*
%{perl_vendorarch}/Guard*
%{_mandir}/man3/*
%changelog
* Sun Nov 08 2009 Nicolas Chuavet <kwizart(a)fedoraproject.org> - 1.021-1
- Specfile autogenerated by cpanspec 1.78.
Index: .cvsignore
===================================================================
RCS file: /cvs/pkgs/rpms/perl-Guard/F-11/.cvsignore,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -p -r1.1 -r1.2
--- .cvsignore 11 Nov 2009 03:50:04 -0000 1.1
+++ .cvsignore 11 Nov 2009 11:00:13 -0000 1.2
@@ -0,0 +1 @@
+Guard-1.021.tar.gz
Index: sources
===================================================================
RCS file: /cvs/pkgs/rpms/perl-Guard/F-11/sources,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -p -r1.1 -r1.2
--- sources 11 Nov 2009 03:50:04 -0000 1.1
+++ sources 11 Nov 2009 11:00:13 -0000 1.2
@@ -0,0 +1 @@
+6c15e885c089115f8263a5873ed74f1e Guard-1.021.tar.gz
14 years, 5 months
rpms/perl-Guard/F-12 import.log, NONE, 1.1 perl-Guard.spec, NONE, 1.1 .cvsignore, 1.1, 1.2 sources, 1.1, 1.2
by Nicolas Chauvet
Author: kwizart
Update of /cvs/pkgs/rpms/perl-Guard/F-12
In directory cvs1.fedora.phx.redhat.com:/tmp/cvs-serv31180/F-12
Modified Files:
.cvsignore sources
Added Files:
import.log perl-Guard.spec
Log Message:
Initial import
--- NEW FILE import.log ---
perl-Guard-1_021-1_fc12:F-12:perl-Guard-1.021-1.fc12.src.rpm:1257937036
--- NEW FILE perl-Guard.spec ---
Name: perl-Guard
Version: 1.021
Release: 1%{?dist}
Summary: Safe cleanup blocks
License: GPL+ or Artistic
Group: Development/Libraries
URL: http://search.cpan.org/dist/Guard/
Source0: http://www.cpan.org/authors/id/M/ML/MLEHMANN/Guard-%{version}.tar.gz
BuildRoot: %{_tmppath}/%{name}-%{version}-%{release}-root-%(%{__id_u} -n)
BuildRequires: perl(ExtUtils::MakeMaker)
Requires: perl(:MODULE_COMPAT_%(eval "`%{__perl} -V:version`"; echo $version))
%description
This module implements so-called "guards". A guard is something
(usually an object) that "guards" a resource, ensuring that it is
cleaned up when expected.
%prep
%setup -q -n Guard-%{version}
%build
%{__perl} Makefile.PL INSTALLDIRS=vendor OPTIMIZE="$RPM_OPT_FLAGS"
make %{?_smp_mflags}
%install
rm -rf $RPM_BUILD_ROOT
make pure_install PERL_INSTALL_ROOT=$RPM_BUILD_ROOT
find $RPM_BUILD_ROOT -type f -name .packlist -exec rm -f {} \;
find $RPM_BUILD_ROOT -type f -name '*.bs' -size 0 -exec rm -f {} \;
find $RPM_BUILD_ROOT -depth -type d -exec rmdir {} 2>/dev/null \;
%{_fixperms} $RPM_BUILD_ROOT/*
%check
make test
%clean
rm -rf $RPM_BUILD_ROOT
%files
%defattr(-,root,root,-)
%doc Changes COPYING README
%{perl_vendorarch}/auto/*
%{perl_vendorarch}/Guard*
%{_mandir}/man3/*
%changelog
* Sun Nov 08 2009 Nicolas Chuavet <kwizart(a)fedoraproject.org> - 1.021-1
- Specfile autogenerated by cpanspec 1.78.
Index: .cvsignore
===================================================================
RCS file: /cvs/pkgs/rpms/perl-Guard/F-12/.cvsignore,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -p -r1.1 -r1.2
--- .cvsignore 11 Nov 2009 03:50:04 -0000 1.1
+++ .cvsignore 11 Nov 2009 10:57:46 -0000 1.2
@@ -0,0 +1 @@
+Guard-1.021.tar.gz
Index: sources
===================================================================
RCS file: /cvs/pkgs/rpms/perl-Guard/F-12/sources,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -p -r1.1 -r1.2
--- sources 11 Nov 2009 03:50:04 -0000 1.1
+++ sources 11 Nov 2009 10:57:46 -0000 1.2
@@ -0,0 +1 @@
+6c15e885c089115f8263a5873ed74f1e Guard-1.021.tar.gz
14 years, 5 months
rpms/perl-Guard/devel import.log,1.1,1.2
by Nicolas Chauvet
Author: kwizart
Update of /cvs/pkgs/rpms/perl-Guard/devel
In directory cvs1.fedora.phx.redhat.com:/tmp/cvs-serv30670/devel
Modified Files:
import.log
Log Message:
Initial import
Index: import.log
===================================================================
RCS file: /cvs/pkgs/rpms/perl-Guard/devel/import.log,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -p -r1.1 -r1.2
--- import.log 11 Nov 2009 10:55:24 -0000 1.1
+++ import.log 11 Nov 2009 10:56:35 -0000 1.2
@@ -1 +1,2 @@
perl-Guard-1_021-1_fc12:HEAD:perl-Guard-1.021-1.fc12.src.rpm:1257936857
+perl-Guard-1_021-1_fc12:HEAD:perl-Guard-1.021-1.fc12.src.rpm:1257936966
14 years, 5 months
rpms/perl-Guard/devel import.log, NONE, 1.1 perl-Guard.spec, NONE, 1.1 .cvsignore, 1.1, 1.2 sources, 1.1, 1.2
by Nicolas Chauvet
Author: kwizart
Update of /cvs/pkgs/rpms/perl-Guard/devel
In directory cvs1.fedora.phx.redhat.com:/tmp/cvs-serv30196/devel
Modified Files:
.cvsignore sources
Added Files:
import.log perl-Guard.spec
Log Message:
Initial import
--- NEW FILE import.log ---
perl-Guard-1_021-1_fc12:HEAD:perl-Guard-1.021-1.fc12.src.rpm:1257936857
--- NEW FILE perl-Guard.spec ---
Name: perl-Guard
Version: 1.021
Release: 1%{?dist}
Summary: Safe cleanup blocks
License: GPL+ or Artistic
Group: Development/Libraries
URL: http://search.cpan.org/dist/Guard/
Source0: http://www.cpan.org/authors/id/M/ML/MLEHMANN/Guard-%{version}.tar.gz
BuildRoot: %{_tmppath}/%{name}-%{version}-%{release}-root-%(%{__id_u} -n)
BuildRequires: perl(ExtUtils::MakeMaker)
Requires: perl(:MODULE_COMPAT_%(eval "`%{__perl} -V:version`"; echo $version))
%description
This module implements so-called "guards". A guard is something
(usually an object) that "guards" a resource, ensuring that it is
cleaned up when expected.
%prep
%setup -q -n Guard-%{version}
%build
%{__perl} Makefile.PL INSTALLDIRS=vendor OPTIMIZE="$RPM_OPT_FLAGS"
make %{?_smp_mflags}
%install
rm -rf $RPM_BUILD_ROOT
make pure_install PERL_INSTALL_ROOT=$RPM_BUILD_ROOT
find $RPM_BUILD_ROOT -type f -name .packlist -exec rm -f {} \;
find $RPM_BUILD_ROOT -type f -name '*.bs' -size 0 -exec rm -f {} \;
find $RPM_BUILD_ROOT -depth -type d -exec rmdir {} 2>/dev/null \;
%{_fixperms} $RPM_BUILD_ROOT/*
%check
make test
%clean
rm -rf $RPM_BUILD_ROOT
%files
%defattr(-,root,root,-)
%doc Changes COPYING README
%{perl_vendorarch}/auto/*
%{perl_vendorarch}/Guard*
%{_mandir}/man3/*
%changelog
* Sun Nov 08 2009 Nicolas Chuavet <kwizart(a)fedoraproject.org> - 1.021-1
- Specfile autogenerated by cpanspec 1.78.
Index: .cvsignore
===================================================================
RCS file: /cvs/pkgs/rpms/perl-Guard/devel/.cvsignore,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -p -r1.1 -r1.2
--- .cvsignore 11 Nov 2009 03:50:04 -0000 1.1
+++ .cvsignore 11 Nov 2009 10:55:24 -0000 1.2
@@ -0,0 +1 @@
+Guard-1.021.tar.gz
Index: sources
===================================================================
RCS file: /cvs/pkgs/rpms/perl-Guard/devel/sources,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -p -r1.1 -r1.2
--- sources 11 Nov 2009 03:50:04 -0000 1.1
+++ sources 11 Nov 2009 10:55:24 -0000 1.2
@@ -0,0 +1 @@
+6c15e885c089115f8263a5873ed74f1e Guard-1.021.tar.gz
14 years, 5 months
rpms/perl-Net-CIDR/EL-5 Makefile, NONE, 1.1 import.log, NONE, 1.1 perl-Net-CIDR.spec, NONE, 1.1 sources, NONE, 1.1
by Nicolas Chauvet
Author: kwizart
Update of /cvs/pkgs/rpms/perl-Net-CIDR/EL-5
In directory cvs1.fedora.phx.redhat.com:/tmp/cvs-serv23172/EL-5
Added Files:
Makefile import.log perl-Net-CIDR.spec sources
Log Message:
Initial import in EL-5
***** Error reading new file: [Errno 2] No such file or directory: 'Makefile'
--- NEW FILE import.log ---
perl-Net-CIDR-0_13-2_fc11:EL-5:perl-Net-CIDR-0.13-2.fc11.src.rpm:1257935633
--- NEW FILE perl-Net-CIDR.spec ---
Name: perl-Net-CIDR
Version: 0.13
Release: 2%{?dist}
Summary: Manipulate IPv4/IPv6 netblocks in CIDR notation
License: GPL+ or Artistic
Group: Development/Libraries
URL: http://search.cpan.org/dist/Net-CIDR/
Source0: http://www.cpan.org/authors/id/M/MR/MRSAM/Net-CIDR-%{version}.tar.gz
BuildRoot: %{_tmppath}/%{name}-%{version}-%{release}-root-%(%{__id_u} -n)
BuildArch: noarch
BuildRequires: perl(ExtUtils::MakeMaker)
Requires: perl(:MODULE_COMPAT_%(eval "`%{__perl} -V:version`"; echo $version))
%description
The Net::CIDR package contains functions that manipulate lists of IP
netblocks expressed in CIDR notation. The Net::CIDR functions handle both
IPv4 and IPv6 addresses.
%prep
%setup -q -n Net-CIDR-%{version}
%build
%{__perl} Makefile.PL INSTALLDIRS=vendor
make %{?_smp_mflags}
%install
rm -rf $RPM_BUILD_ROOT
make pure_install PERL_INSTALL_ROOT=$RPM_BUILD_ROOT
find $RPM_BUILD_ROOT -type f -name .packlist -exec rm -f {} \;
find $RPM_BUILD_ROOT -depth -type d -exec rmdir {} 2>/dev/null \;
%{_fixperms} $RPM_BUILD_ROOT/*
%check
make test
%clean
rm -rf $RPM_BUILD_ROOT
%files
%defattr(-,root,root,-)
%doc Changes COPYING README
%{perl_vendorlib}/Net/
%{_mandir}/man3/*.3pm*
%changelog
* Mon Nov 9 2009 Nicolas Chauvet <kwizart(a)fedoraproject.org> - 0.13-2
- Fix License tag
- Remove Net-CIDR.spec from %%doc
- List files more explicitely
* Fri Sep 25 2009 Nicolas Chauvet <kwizart(a)fedoraproject.org> - 0.13-1
- Specfile autogenerated by cpanspec 1.78.
--- NEW FILE sources ---
40f0f42104b314af91ab78119e0096de Net-CIDR-0.13.tar.gz
14 years, 5 months
rpms/perl-Net-CIDR/F-10 Makefile, NONE, 1.1 import.log, NONE, 1.1 perl-Net-CIDR.spec, NONE, 1.1 sources, NONE, 1.1
by Nicolas Chauvet
Author: kwizart
Update of /cvs/pkgs/rpms/perl-Net-CIDR/F-10
In directory cvs1.fedora.phx.redhat.com:/tmp/cvs-serv22453/F-10
Added Files:
Makefile import.log perl-Net-CIDR.spec sources
Log Message:
Initial import in F-10
***** Error reading new file: [Errno 2] No such file or directory: 'Makefile'
--- NEW FILE import.log ---
perl-Net-CIDR-0_13-2_fc11:F-10:perl-Net-CIDR-0.13-2.fc11.src.rpm:1257935420
--- NEW FILE perl-Net-CIDR.spec ---
Name: perl-Net-CIDR
Version: 0.13
Release: 2%{?dist}
Summary: Manipulate IPv4/IPv6 netblocks in CIDR notation
License: GPL+ or Artistic
Group: Development/Libraries
URL: http://search.cpan.org/dist/Net-CIDR/
Source0: http://www.cpan.org/authors/id/M/MR/MRSAM/Net-CIDR-%{version}.tar.gz
BuildRoot: %{_tmppath}/%{name}-%{version}-%{release}-root-%(%{__id_u} -n)
BuildArch: noarch
BuildRequires: perl(ExtUtils::MakeMaker)
Requires: perl(:MODULE_COMPAT_%(eval "`%{__perl} -V:version`"; echo $version))
%description
The Net::CIDR package contains functions that manipulate lists of IP
netblocks expressed in CIDR notation. The Net::CIDR functions handle both
IPv4 and IPv6 addresses.
%prep
%setup -q -n Net-CIDR-%{version}
%build
%{__perl} Makefile.PL INSTALLDIRS=vendor
make %{?_smp_mflags}
%install
rm -rf $RPM_BUILD_ROOT
make pure_install PERL_INSTALL_ROOT=$RPM_BUILD_ROOT
find $RPM_BUILD_ROOT -type f -name .packlist -exec rm -f {} \;
find $RPM_BUILD_ROOT -depth -type d -exec rmdir {} 2>/dev/null \;
%{_fixperms} $RPM_BUILD_ROOT/*
%check
make test
%clean
rm -rf $RPM_BUILD_ROOT
%files
%defattr(-,root,root,-)
%doc Changes COPYING README
%{perl_vendorlib}/Net/
%{_mandir}/man3/*.3pm*
%changelog
* Mon Nov 9 2009 Nicolas Chauvet <kwizart(a)fedoraproject.org> - 0.13-2
- Fix License tag
- Remove Net-CIDR.spec from %%doc
- List files more explicitely
* Fri Sep 25 2009 Nicolas Chauvet <kwizart(a)fedoraproject.org> - 0.13-1
- Specfile autogenerated by cpanspec 1.78.
--- NEW FILE sources ---
40f0f42104b314af91ab78119e0096de Net-CIDR-0.13.tar.gz
14 years, 5 months