rpms/R-GenomicFeatures/F-12 R-GenomicFeatures.spec, NONE, 1.1 import.log, NONE, 1.1 .cvsignore, 1.1, 1.2 sources, 1.1, 1.2

[Pierre-YvesChibon]

Author: pingou

Update of /cvs/pkgs/rpms/R-GenomicFeatures/F-12
In directory cvs01.phx2.fedoraproject.org:/tmp/cvs-serv32740/F-12

Modified Files:
	.cvsignore sources 
Added Files:
	R-GenomicFeatures.spec import.log 
Log Message:
Initial import



--- NEW FILE R-GenomicFeatures.spec ---
%global packname  GenomicFeatures
%global Rvers     2.11.0

Name:             R-%{packname}
Version:          0.0.9
Release:          2%{?dist}
Summary:          A transient package to store various genomic features

Group:            Applications/Engineering 
License:          Artistic 2.0
URL:              http://bioconductor.org/packages/release/data/experiment/html/GenomicFeatures.html
Source0:          http://www.bioconductor.org/packages/release/data/experiment/src/contrib/%{packname}_%{version}.tar.gz
BuildRoot:        %{_tmppath}/%{name}-%{version}-%{release}-root-%(%{__id_u} -n)
BuildArch:        noarch 

BuildRequires:    R-devel >= %{Rvers} tex(latex) R-IRanges
Requires:         R-core >= %{Rvers} R-IRanges

%description
Various Genome-related features, such as gene boundaries, CpG islands,
etc.

%prep
%setup -q -c -n %{packname}

%build

%install
rm -rf %{buildroot}



# noarch -> Architecture independent package
mkdir -p %{buildroot}%{_datadir}/R/library 
R CMD INSTALL %{packname} -l %{buildroot}%{_datadir}/R/library
# Clean up in advance of check
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -rf %{buildroot}%{_datadir}/R/library/R.css



%check
%{_bindir}/R CMD check %{packname}

%clean
rm -rf %{buildroot}

%files
%defattr(-, root, root, -)
%doc %{_datadir}/R/library/GenomicFeatures/html
%doc %{_datadir}/R/library/GenomicFeatures/DESCRIPTION
%{_datadir}/R/library/GenomicFeatures/NAMESPACE
%{_datadir}/R/library/GenomicFeatures/Meta
%{_datadir}/R/library/GenomicFeatures/data
%{_datadir}/R/library/GenomicFeatures/R
%{_datadir}/R/library/GenomicFeatures/INDEX
%{_datadir}/R/library/GenomicFeatures/help

%changelog
* Sun Jun 27 2010 pingou <pingou at pingoured.fr> 0.0.9-2
- Fix ending of description (missing an etc)
- Add R-IRanges as R and BR

* Sat Jun 05 2010 pingou <pingou at pingoured.fr> 0.0.9-1
- initial package for Fedora


--- NEW FILE import.log ---
R-GenomicFeatures-0_0_9-2_fc13:F-12:R-GenomicFeatures-0.0.9-2.fc13.src.rpm:1277649393


Index: .cvsignore
===================================================================
RCS file: /cvs/pkgs/rpms/R-GenomicFeatures/F-12/.cvsignore,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -p -r1.1 -r1.2
--- .cvsignore	23 Jun 2010 01:56:40 -0000	1.1
+++ .cvsignore	27 Jun 2010 14:37:42 -0000	1.2
@@ -0,0 +1 @@
+GenomicFeatures_0.0.9.tar.gz


Index: sources
===================================================================
RCS file: /cvs/pkgs/rpms/R-GenomicFeatures/F-12/sources,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -p -r1.1 -r1.2
--- sources	23 Jun 2010 01:56:40 -0000	1.1
+++ sources	27 Jun 2010 14:37:42 -0000	1.2
@@ -0,0 +1 @@
+b079f50fbf30f71606022dad8f980399  GenomicFeatures_0.0.9.tar.gz