rpms/R-GenomicFeatures/F-13 R-GenomicFeatures.spec, NONE, 1.1 import.log, NONE, 1.1 .cvsignore, 1.1, 1.2 sources, 1.1, 1.2
Pierre-YvesChibon
pingou at fedoraproject.org
Sun Jun 27 14:39:37 UTC 2010
Author: pingou
Update of /cvs/pkgs/rpms/R-GenomicFeatures/F-13
In directory cvs01.phx2.fedoraproject.org:/tmp/cvs-serv534/F-13
Modified Files:
.cvsignore sources
Added Files:
R-GenomicFeatures.spec import.log
Log Message:
Initial import
--- NEW FILE R-GenomicFeatures.spec ---
%global packname GenomicFeatures
%global Rvers 2.11.0
Name: R-%{packname}
Version: 0.0.9
Release: 2%{?dist}
Summary: A transient package to store various genomic features
Group: Applications/Engineering
License: Artistic 2.0
URL: http://bioconductor.org/packages/release/data/experiment/html/GenomicFeatures.html
Source0: http://www.bioconductor.org/packages/release/data/experiment/src/contrib/%{packname}_%{version}.tar.gz
BuildRoot: %{_tmppath}/%{name}-%{version}-%{release}-root-%(%{__id_u} -n)
BuildArch: noarch
BuildRequires: R-devel >= %{Rvers} tex(latex) R-IRanges
Requires: R-core >= %{Rvers} R-IRanges
%description
Various Genome-related features, such as gene boundaries, CpG islands,
etc.
%prep
%setup -q -c -n %{packname}
%build
%install
rm -rf %{buildroot}
# noarch -> Architecture independent package
mkdir -p %{buildroot}%{_datadir}/R/library
R CMD INSTALL %{packname} -l %{buildroot}%{_datadir}/R/library
# Clean up in advance of check
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -rf %{buildroot}%{_datadir}/R/library/R.css
%check
%{_bindir}/R CMD check %{packname}
%clean
rm -rf %{buildroot}
%files
%defattr(-, root, root, -)
%doc %{_datadir}/R/library/GenomicFeatures/html
%doc %{_datadir}/R/library/GenomicFeatures/DESCRIPTION
%{_datadir}/R/library/GenomicFeatures/NAMESPACE
%{_datadir}/R/library/GenomicFeatures/Meta
%{_datadir}/R/library/GenomicFeatures/data
%{_datadir}/R/library/GenomicFeatures/R
%{_datadir}/R/library/GenomicFeatures/INDEX
%{_datadir}/R/library/GenomicFeatures/help
%changelog
* Sun Jun 27 2010 pingou <pingou at pingoured.fr> 0.0.9-2
- Fix ending of description (missing an etc)
- Add R-IRanges as R and BR
* Sat Jun 05 2010 pingou <pingou at pingoured.fr> 0.0.9-1
- initial package for Fedora
--- NEW FILE import.log ---
R-GenomicFeatures-0_0_9-2_fc13:F-13:R-GenomicFeatures-0.0.9-2.fc13.src.rpm:1277649541
Index: .cvsignore
===================================================================
RCS file: /cvs/pkgs/rpms/R-GenomicFeatures/F-13/.cvsignore,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -p -r1.1 -r1.2
--- .cvsignore 23 Jun 2010 01:56:40 -0000 1.1
+++ .cvsignore 27 Jun 2010 14:39:37 -0000 1.2
@@ -0,0 +1 @@
+GenomicFeatures_0.0.9.tar.gz
Index: sources
===================================================================
RCS file: /cvs/pkgs/rpms/R-GenomicFeatures/F-13/sources,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -p -r1.1 -r1.2
--- sources 23 Jun 2010 01:56:40 -0000 1.1
+++ sources 27 Jun 2010 14:39:37 -0000 1.2
@@ -0,0 +1 @@
+b079f50fbf30f71606022dad8f980399 GenomicFeatures_0.0.9.tar.gz
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