Yet another gargantuan mathematical software update
Hi folks,
It's about time for another "update the world" moment for some of the
mathematical software we have in Fedora. I'm going to try to clear
away a big chunk of my backlogged package work with this update, so it
will be even bigger than usual. Primary goals are to switch from
atlas or the reference blas to openblas, and to drop python 2
packages.
I plan to do all of the necessary rebuilds myself. Package
maintainers, if you would rather that I did not rebuild your package
for you, please let me know. Otherwise, I will do all of these builds
in approximately 1 week from today. I plan to build for Rawhide only.
As usual with this package set, the rebuilds will take a few days, so
expect broken dependencies in the middle.
4ti2: revive this package now that latte-integrale upstream has split
it back out
arb: update to 2.15.0
cddlib: update to 0.94j; epoch bump needed to deal with the new dot in
the version number
ceres-solver: rebuild for tbb
cocoalib: switch to openblas
cryptominisat: update to 5.6.5
cxsc: switch to openblas
DSDP: switch to openblas
eclib: update to 20180815
embree: rebuild for tbb
fawkes: rebuild for tbb
fflas-ffpack: switch to openblas
flint: switch to openblas (needs rebuild anyway due to ntl update)
gazebo: rebuild for tbb
gfan: rebuild for cddlib
giac: rebuild for ntl
iml: switch to openblas
latte-integrale: update to 1.7.5. Not really integrale anymore since
4ti2 was unbundled...
linbox: switch to openblas, enable OpenCL interface
Macaulay2: switch to openblas (needs rebuild anyway due to ntl update)
mathicgb: rebuild for tbb, fix incompatibility with recent gtest versions
ntl: update to 11.3.0. This involves an soname bump.
OCE: rebuild for tbb
opencv: rebuild for tbb
openvdb: rebuild for tbb
polymake: rebuild for cddlib
pynac: switch to openblas, switch from python 2 to python 3
python-cvxopt: update to 1.2.1, switch to openblas, drop the python 2 subpackage
python-fastcache: update to 1.1.0, drop the python 2 subpackage
python-networkx: update to 2.1, drop the python 2 subpackages,
consolidate back to a single package again since this cannot appear in
EPEL < 8 anyway
python-theano: switch to openblas, build with libgpuarray for OpenCL
support, drop the python 2 subpackage
root: rebuild for tbb
sagemath: switch to openblas, switch (with great fear and trepidation)
to the experimental python 3 build
Singular: rebuild for cddlib
suitesparse: rebuild for tbb
sympol: rebuild for cddlib
sympy: update to 1.3, drop the python 2 subpackage
tbb: update to 2019_U1. This has the same soname, but has a
backwards-incompatible ABI change on 32-bit platforms. Therefore, all
consumers must be rebuilt.
TOPCOM: rebuild for cddlib
Regards,
--
Jerry James
http://www.jamezone.org/